AT4G31805

Protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0010398
Physical Location & Seq
Forward (+)
15385280 .. 15387097
1818 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G31805.1

Sequence Viewer

Length: 1035 bp
ATGGAAGGCTCGCGGCGGAGGAGGGGAGATGGGTGCACTATCGTGCAGTGTTATACTCCTAGGAGATTCGTGGGCCGGTGGCTTTCGGGGTTGAGAAGTTCCAAGGGGAAGAGAGATGCAGGGGAGGAACAAGAAGATGACACCAGAAGGTATCAATTAGCGCCTATAAGGTGTTCGACGAGTTTAAATCAGCTGGTAATGCAGGACAATAAGCAGAACTGCCGCCTGAATAAGAGTAAAGAGCCGGAGACTAATACATTTGAGTCACAAAGCAGAGAGTCACCTTTGGAAGTGGGAATTGGTTCTTTTTTGCTCTATCTTGTTGTTGCAAGTAAAACCGAGCTTGATAAGATGACAAACCTGCGAATGCAAATGGAGATGTTTCTTCTTAATGCAAAAGAACAACTACAGAAGAAGGATACACCTATGTCTTCAAATGAAGCAAGCGGTTTCCAGTTTTCTCCTCAAGAATTCTCGAATTTGGCGTCATCCATTTTCCAAGAGTCATCATCGAGTGTTCTTCAAGAGGAGTACACCGAATTCGAGGTCTCAGAGCCAGAGGATTATCGTCGAGGAACAGACTGCAACTCAAAACTCCAGGCTGAGGTAGGTAGGTTACCTCTGGGTGAAAAAGCAGAGGATAGACAAACAAAGCATCAGATTCAGAGACAATGCAAACTTAAAGACAATGAGGTCACAAAGAGTCATATACCAGAGATGGTGGTGTCAGATGAAAGATATGGAGTGTGTCCGTACGAACTAGACAAAAAGCTGCATGAACTACTGGAGACAAGGCAACAAGAAGAGTTAGTGAAGCTTGAGACTGCTCTGAATCGTGTTGAACGCAGACTACAAGAGAAAGAAACCGAGGTTTCATGGTGGAAAGACGCAGCCCGCCTGCTTGCCCAGCGTGTTCCTGAATCTTCTCGGTCTGGACTAGAATGGTGCAACCCAGACTCTTCCACATGTTCAGAGCGATCTGTTCCAAGATCTTATGAAGCATGTTCGATACACCGCACCAGTTTTTCTAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0008150 GO:0008356 GO:0009987 GO:0044424 GO:0044464 GO:0051301 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

344

Amino Acids

39.77

Weight (kDa)

6.03

Isoelectric Point (pI)

65.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010398)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31805 AT5G10890 AT5G10890
fragaria_vesca FvH4_2g41090
malus_domestica MD08G1057500.v1.1 MD15G1039900.v1.1
prunus_persica Prupe.1G393300_v2.0.a1
pyrus_communis pycom08g04700 pycom15g03730 pycom15g03740
rosa_chinensis RchiOBHm_Chr6g0299451
rosa_laevigata RLG00000011430
rosa_multiflora Rmu_sc0017526.1_g000008 Rmu_sc0037301.1_g000003
rosa_roxburghii Rroxscaffold_7G00168670
rosa_rugosa Rorug06G0288400
rosa_samantha Rh6AG400200 Rh6BG408800 Rh6CG414300 Rh6DG401300
rosa_wichuraiana Rw6G035030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 692
Acc36I ACCTGC 1 cut(s) 369
AccII CGCG 1 cut(s) 13
AciI CCGC 6 cut(s) 13, 16, 223, 447, 895, 1015
AcsI RAATTY 3 cut(s) 470, 478, 539
AcyI GRCGYC 1 cut(s) 485
AfaI GTAC 2 cut(s) 533, 755
AfiI CCNNNNNNNGG 1 cut(s) 604
AflIII ACRYGT 1 cut(s) 965
AgsI TTSAA 3 cut(s) 435, 524, 842
AjnI CCWGG 1 cut(s) 597
AjuI GAANNNNNNNTTGG 2 cut(s) 282, 314
AleI CACNNNNGTG 1 cut(s) 41
AluBI AGCT 4 cut(s) 193, 343, 772, 817
AluI AGCT 4 cut(s) 193, 343, 772, 817
Alw21I GWGCWC 1 cut(s) 38
Alw26I GTCTC 5 cut(s) 242, 553, 661, 782, 815
Alw44I GTGCAC 1 cut(s) 34
AoxI GGCC 1 cut(s) 73
ApaLI GTGCAC 1 cut(s) 34
ApeKI GCWGC 2 cut(s) 772, 890
ApoI RAATTY 3 cut(s) 470, 478, 539
ArsI GACNNNNNNTTYG 4 cut(s) 470, 502, 531, 563
Asp700I GAANNNNTTC 1 cut(s) 301
AspA2I CCTAGG 1 cut(s) 59
AspLEI GCGC 1 cut(s) 163
AspS9I GGNCC 1 cut(s) 73
AsuHPI GGTGA 2 cut(s) 273, 638
AvrII CCTAGG 1 cut(s) 59
BaeGI GKGCMC 1 cut(s) 38
BbsI GAAGAC 1 cut(s) 423
Bbv12I GWGCWC 1 cut(s) 38
BbvCI CCTCAGC 1 cut(s) 603
BbvI GCAGC 2 cut(s) 759, 902
BccI CCATC 2 cut(s) 23, 712
BciT130I CCWGG 1 cut(s) 599
BciVI GTATCC 1 cut(s) 412
BcoDI GTCTC 5 cut(s) 242, 553, 661, 782, 815
BfaI CTAG 4 cut(s) 60, 761, 938, 1029
BfmI CTRYAG 1 cut(s) 407
BfoI RGCGCY 1 cut(s) 164
BfuAI ACCTGC 1 cut(s) 369
BfuI GTATCC 1 cut(s) 412
BglII AGATCT 1 cut(s) 989
BisI GCNGC 4 cut(s) 14, 223, 773, 891
BlnI CCTAGG 1 cut(s) 59
BlsI GCNGC 4 cut(s) 15, 224, 774, 892
Bme1390I CCNGG 1 cut(s) 599
BmgT120I GGNCC 1 cut(s) 73
BmrFI CCNGG 1 cut(s) 599
BmsI GCATC 2 cut(s) 106, 664
BpiI GAAGAC 1 cut(s) 423
BpmI CTGGAG 2 cut(s) 581, 806
Bpu10I CCTNAGC 1 cut(s) 603
BpuEI CTTGAG 2 cut(s) 450, 839
BsaHI GRCGYC 1 cut(s) 485
BsaI GGTCTC 1 cut(s) 553
BsaJI CCNNGG 3 cut(s) 59, 102, 867
Bsc4I CCNNNNNNNGG 1 cut(s) 604
Bse118I RCCGGY 1 cut(s) 75
Bse1I ACTGG 3 cut(s) 454, 789, 1020
BseBI CCWGG 1 cut(s) 599
BseDI CCNNGG 3 cut(s) 59, 102, 867
BseGI GGATG 1 cut(s) 488
BseLI CCNNNNNNNGG 1 cut(s) 604
BseMII CTCAG 2 cut(s) 564, 594
BseNI ACTGG 3 cut(s) 454, 789, 1020
BseRI GAGGAG 3 cut(s) 34, 453, 542
BseSI GKGCMC 1 cut(s) 38
BseXI GCAGC 2 cut(s) 759, 902
BseYI CCCAGC 1 cut(s) 906
BsgI GTGCAG 1 cut(s) 65
Bsh1236I CGCG 1 cut(s) 13
BshFI GGCC 1 cut(s) 75
BsiHKAI GWGCWC 1 cut(s) 38
BsiSI CCGG 2 cut(s) 76, 245
BsiWI CGTACG 1 cut(s) 753
BslI CCNNNNNNNGG 1 cut(s) 604
BsmAI GTCTC 5 cut(s) 242, 553, 661, 782, 815
BsmI GAATGC 1 cut(s) 372
BsnI GGCC 1 cut(s) 75
Bso31I GGTCTC 1 cut(s) 553
Bsp1286I GDGCHC 1 cut(s) 38
Bsp143I GATC 2 cut(s) 977, 989
BspACI CCGC 6 cut(s) 13, 16, 223, 447, 895, 1015
BspANI GGCC 1 cut(s) 75
BspCNI CTCAG 2 cut(s) 563, 595
BspFNI CGCG 1 cut(s) 13
BspMI ACCTGC 1 cut(s) 369
BspTNI GGTCTC 1 cut(s) 553
BsrFI RCCGGY 1 cut(s) 75
BsrI ACTGG 3 cut(s) 454, 789, 1020
BssAI RCCGGY 1 cut(s) 75
BssECI CCNNGG 3 cut(s) 59, 102, 867
BssMI GATC 2 cut(s) 977, 989
BssNI GRCGYC 1 cut(s) 485
BssT1I CCWWGG 2 cut(s) 59, 102
Bst2UI CCWGG 1 cut(s) 599
Bst6I CTCTTC 3 cut(s) 104, 798, 964
BstACI GRCGYC 1 cut(s) 485
BstC8I GCNNGC 5 cut(s) 11, 445, 895, 899, 903
BstDEI CTNAG 2 cut(s) 550, 603
BstEII GGTNACC 1 cut(s) 615
BstF5I GGATG 1 cut(s) 488
BstFNI CGCG 1 cut(s) 13
BstH2I RGCGCY 1 cut(s) 164
BstHHI GCGC 1 cut(s) 163
BstKTI GATC 2 cut(s) 980, 992
BstMAI GTCTC 5 cut(s) 242, 553, 661, 782, 815
BstMBI GATC 2 cut(s) 977, 989
BstMWI GCNNNNNNNGC 2 cut(s) 199, 907
BstNI CCWGG 1 cut(s) 599
BstNSI RCATGY 2 cut(s) 969, 1005
BstPI GGTNACC 1 cut(s) 615
BstSCI CCNGG 1 cut(s) 597
BstSFI CTRYAG 1 cut(s) 407
BstSLI GKGCMC 1 cut(s) 38
BstUI CGCG 1 cut(s) 13
BstV1I GCAGC 2 cut(s) 759, 902
BstV2I GAAGAC 1 cut(s) 423
BstX2I RGATCY 1 cut(s) 989
BstYI RGATCY 1 cut(s) 989
BsuI GTATCC 1 cut(s) 412
BsuRI GGCC 1 cut(s) 75
BtsCI GGATG 1 cut(s) 488
BtsI GCAGTG 1 cut(s) 53
BtsIMutI CAGTG 1 cut(s) 53
BveI ACCTGC 1 cut(s) 369
Cac8I GCNNGC 5 cut(s) 11, 445, 895, 899, 903
CfoI GCGC 1 cut(s) 163
Cfr10I RCCGGY 1 cut(s) 75
Cfr13I GGNCC 1 cut(s) 73
CseI GACGC 2 cut(s) 474, 896
Csp6I GTAC 2 cut(s) 532, 754
CviAII CATG 4 cut(s) 776, 876, 966, 1002
CviQI GTAC 2 cut(s) 532, 754
DdeI CTNAG 2 cut(s) 550, 603
DpnI GATC 2 cut(s) 979, 991
DpnII GATC 2 cut(s) 977, 989
DraI TTTAAA 1 cut(s) 186
DrdI GACNNNNNNGTC 1 cut(s) 692
DseDI GACNNNNNNGTC 1 cut(s) 692
Eam1104I CTCTTC 3 cut(s) 104, 798, 964
EarI CTCTTC 3 cut(s) 104, 798, 964
EciI GGCGGA 1 cut(s) 31
Eco130I CCWWGG 2 cut(s) 59, 102
Eco31I GGTCTC 1 cut(s) 553
Eco91I GGTNACC 1 cut(s) 615
EcoO65I GGTNACC 1 cut(s) 615
EcoRI GAATTC 2 cut(s) 470, 539
EcoRII CCWGG 1 cut(s) 597
EcoT14I CCWWGG 2 cut(s) 59, 102
ErhI CCWWGG 2 cut(s) 59, 102
FaeI CATG 4 cut(s) 779, 879, 969, 1005
FatI CATG 4 cut(s) 775, 875, 965, 1001
FauI CCCGC 1 cut(s) 902
Fnu4HI GCNGC 4 cut(s) 14, 223, 773, 891
FokI GGATG 1 cut(s) 475
Fsp4HI GCNGC 4 cut(s) 14, 223, 773, 891
FspBI CTAG 4 cut(s) 60, 761, 938, 1029
GlaI GCGC 1 cut(s) 162
GluI GCNGC 4 cut(s) 14, 223, 773, 891
GsaI CCCAGC 1 cut(s) 910
GsuI CTGGAG 2 cut(s) 581, 806
HaeII RGCGCY 1 cut(s) 164
HaeIII GGCC 1 cut(s) 75
HapII CCGG 2 cut(s) 76, 245
HgaI GACGC 2 cut(s) 474, 896
HhaI GCGC 1 cut(s) 163
Hin1I GRCGYC 1 cut(s) 485
Hin1II CATG 4 cut(s) 779, 879, 969, 1005
Hin6I GCGC 1 cut(s) 161
HinP1I GCGC 1 cut(s) 161
HindIII AAGCTT 1 cut(s) 815
HinfI GANTC 9 cut(s) 66, 263, 278, 503, 661, 703, 832, 920, 956
HpaII CCGG 2 cut(s) 76, 245
HphI GGTGA 2 cut(s) 273, 638
Hpy166II GTNNAC 2 cut(s) 36, 534
Hpy188I TCNGA 6 cut(s) 553, 660, 666, 730, 831, 973
Hpy188III TCNNGA 6 cut(s) 467, 475, 524, 917, 933, 1029
Hpy8I GTNNAC 2 cut(s) 36, 534
Hpy99I CGWCG 2 cut(s) 181, 573
HpyAV CCTTC 2 cut(s) 141, 409
HpyF10VI GCNNNNNNNGC 2 cut(s) 199, 907
HpyF3I CTNAG 2 cut(s) 550, 603
Hsp92I GRCGYC 1 cut(s) 485
Hsp92II CATG 4 cut(s) 779, 879, 969, 1005
HspAI GCGC 1 cut(s) 161
Kzo9I GATC 2 cut(s) 977, 989
Lsp1109I GCAGC 2 cut(s) 759, 902
LweI GCATC 2 cut(s) 106, 664
MaeI CTAG 4 cut(s) 60, 761, 938, 1029
MaeIII GTNAC 4 cut(s) 264, 279, 615, 694
MalI GATC 2 cut(s) 979, 991
MboI GATC 2 cut(s) 977, 989
MboII GAAGA 9 cut(s) 121, 146, 377, 423, 424, 512, 815, 915, 951
MflI RGATCY 1 cut(s) 989
MhlI GDGCHC 1 cut(s) 38
MluCI AATT 5 cut(s) 155, 297, 470, 478, 539
MlyI GAGTC 5 cut(s) 272, 287, 512, 712, 950
MroXI GAANNNNTTC 1 cut(s) 301
MseI TTAA 3 cut(s) 185, 390, 681
MslI CAYNNNNRTG 1 cut(s) 41
MspA1I CMGCKG 1 cut(s) 193
MspI CCGG 2 cut(s) 76, 245
MspR9I CCNGG 1 cut(s) 599
Mva1269I GAATGC 1 cut(s) 372
MvaI CCWGG 1 cut(s) 599
MvnI CGCG 1 cut(s) 13
MwoI GCNNNNNNNGC 2 cut(s) 199, 907
NdeII GATC 2 cut(s) 977, 989
NlaIII CATG 4 cut(s) 779, 879, 969, 1005
NmuCI GTSAC 3 cut(s) 264, 279, 694
NspI RCATGY 2 cut(s) 969, 1005
OliI CACNNNNGTG 1 cut(s) 41
PciI ACATGT 1 cut(s) 965
PcsI WCGNNNNNNNCGW 1 cut(s) 482
PctI GAATGC 1 cut(s) 372
PdmI GAANNNNTTC 1 cut(s) 301
PfeI GAWTC 4 cut(s) 66, 661, 832, 920
Pfl23II CGTACG 1 cut(s) 753
PkrI GCNGC 4 cut(s) 15, 224, 774, 892
PleI GAGTC 5 cut(s) 271, 286, 511, 711, 950
PpsI GAGTC 5 cut(s) 271, 286, 511, 711, 950
PscI ACATGT 1 cut(s) 965
Psp6I CCWGG 1 cut(s) 597
PspEI GGTNACC 1 cut(s) 615
PspFI CCCAGC 1 cut(s) 906
PspGI CCWGG 1 cut(s) 597
PspLI CGTACG 1 cut(s) 753
PspPI GGNCC 1 cut(s) 73
PsrI GAACNNNNNNTAC 2 cut(s) 834, 866
PsuI RGATCY 1 cut(s) 989
PvuII CAGCTG 1 cut(s) 193
RsaI GTAC 2 cut(s) 533, 755
RsaNI GTAC 2 cut(s) 532, 754
RseI CAYNNNNRTG 1 cut(s) 41
SaqAI TTAA 3 cut(s) 185, 390, 681
SatI GCNGC 4 cut(s) 14, 223, 773, 891
Sau3AI GATC 2 cut(s) 977, 989
Sau96I GGNCC 1 cut(s) 73
SchI GAGTC 5 cut(s) 272, 287, 512, 712, 950
ScrFI CCNGG 1 cut(s) 599
SduI GDGCHC 1 cut(s) 38
SfaNI GCATC 2 cut(s) 106, 664
SfcI CTRYAG 1 cut(s) 407
SmiMI CAYNNNNRTG 1 cut(s) 41
SmlI CTYRAG 2 cut(s) 465, 818
SmoI CTYRAG 2 cut(s) 465, 818
Sse9I AATT 5 cut(s) 155, 297, 470, 478, 539
SsiI CCGC 6 cut(s) 13, 16, 223, 447, 895, 1015
SspMI CTAG 4 cut(s) 60, 761, 938, 1029
StyD4I CCNGG 1 cut(s) 597
StyI CCWWGG 2 cut(s) 59, 102
TaqI TCGA 6 cut(s) 176, 476, 512, 543, 571, 1007
TaqII GACCGA 1 cut(s) 918
TasI AATT 5 cut(s) 155, 297, 470, 478, 539
TatI WGTACW 1 cut(s) 531
TauI GCSGC 2 cut(s) 16, 225
TfiI GAWTC 4 cut(s) 66, 661, 832, 920
Tru1I TTAA 3 cut(s) 185, 390, 681
Tru9I TTAA 3 cut(s) 185, 390, 681
TscAI CASTG 1 cut(s) 53
TseFI GTSAC 3 cut(s) 264, 279, 694
TseI GCWGC 2 cut(s) 772, 890
Tsp45I GTSAC 3 cut(s) 264, 279, 694
TspDTI ATGAA 5 cut(s) 453, 747, 792, 864, 1011
TspGWI ACGGA 1 cut(s) 741
TspRI CASTG 1 cut(s) 53
VneI GTGCAC 1 cut(s) 34
XapI RAATTY 3 cut(s) 470, 478, 539
XbaI TCTAGA 1 cut(s) 1028
XceI RCATGY 2 cut(s) 969, 1005
XmaJI CCTAGG 1 cut(s) 59
XmnI GAANNNNTTC 1 cut(s) 301
XspI CTAG 4 cut(s) 60, 761, 938, 1029
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.