Prupe.1G393300_v2.0.a1

Protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0010398
Physical Location & Seq
Forward (+)
35023502 .. 35025585
2084 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G393300.1

Sequence Viewer

Length: 1158 bp
ATGGAGAAGAATGACGATCGCTTCTTTAAAACCCTCATTCTCTCCCCTTTCCGTTACAGCAAGACCCGCCACATCCGCATCGCCGATATTCTCGTTGATGAAGAAGAGGGATCCGAAACCGGCGGCTACGATTGCGTCGGAGACTTCAATATGGATGGCATCGGAGACCTCCCGAAGGACGACAGATTGATGGCTTTACAGTGCTCCACTCCGCGCCGTATCATTTCCCGATGGCTGTCGTCTCTGAGACGATCCAAGAGAAGGCGAAGCGACGTCGTACGGAGCCAGAAGATATTCAAAGAGGTCGCGAGAAGGGAAACCGGTGACGAGTCAACGCACGCCTCCTGTTCGACGCATGGATTGAAGCAGTCGGGACAGTTTGTAAAAGATAACGGCTCATTCAATTTGGGCGTTGCGTGCGGTTTGATATATCTGATCGTCGCCAGTAAAAATGAGCTTACAAAGATGGTGGAGCTGCGGACACAAATGGAGCTGCTTCTTCAAAACGCAAAAGAGGGATTGCAAAGCAAGAACGCGCCTTTTGACGCCAAACCGTTGGAGTTGAATGAGATGAATATTGCTTCTTCCGCCACTGATTTCCATCAAGCTTCGAGCTCGAGCTCCGATAGCCAGTTTTCGCTTCAATCTGGTGTTGTCCGTGATGTGTGCTCGGAATATATTAGAAATGAAGAAGGAGAAGGAGAGAGAGATGAATGCGTGGCAGGAATGGATCAACTTGAGGCGGAGCTTGAAGCCGAGTTAGAACGGTTGCAGCTCCAATTGGATTCGGAAAATGATTCATCCAATTCTGAATACCCTCAGCAGAGGCTAAAGGCTTCTAGAGACTGTGCTCTTGTAATTGACTGTGATGAAGCAGAACCGCCAGATTATGCTGAAATGCCCTGTGACTATGGAGTTCCTGCACTTGAACTTGAGAGGAGGTTGCATCAAGTGTTGGAAGCGAGACAGGAAGAACGGATAAAAGAACTTGAAGTTGCTTTAGAGTACGCGAAGCGCAAGCTTCACGAGAAAGAAATAGAGGTTTCATGGTGGAAAGAAACTGCAACTGCAGCACTTGTATCACACCATGTTCCAGATCCTTCAGCGTCGATTGCTTCCCAGCACGATCCCGAAAGTACTTTTCACTCGTTTAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0008150 GO:0008356 GO:0009987 GO:0044424 GO:0044464 GO:0051301 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

386

Amino Acids

43.6

Weight (kDa)

4.97

Isoelectric Point (pI)

65.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010398)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31805 AT5G10890 AT5G10890
fragaria_vesca FvH4_2g41090
malus_domestica MD08G1057500.v1.1 MD15G1039900.v1.1
prunus_persica Prupe.1G393300_v2.0.a1
pyrus_communis pycom08g04700 pycom15g03730 pycom15g03740
rosa_chinensis RchiOBHm_Chr6g0299451
rosa_laevigata RLG00000011430
rosa_multiflora Rmu_sc0017526.1_g000008 Rmu_sc0037301.1_g000003
rosa_roxburghii Rroxscaffold_7G00168670
rosa_rugosa Rorug06G0288400
rosa_samantha Rh6AG400200 Rh6BG408800 Rh6CG414300 Rh6DG401300
rosa_wichuraiana Rw6G035030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 276
AccII CGCG 4 cut(s) 214, 308, 536, 1010
AciI CCGC 9 cut(s) 67, 76, 123, 212, 420, 478, 588, 743, 881
AclWI GGATC 6 cut(s) 105, 118, 246, 738, 1091, 1121
AcuI CTGAAG 1 cut(s) 1086
AcyI GRCGYC 2 cut(s) 273, 546
AfaI GTAC 3 cut(s) 279, 1007, 1138
AfiI CCNNNNNNNGG 2 cut(s) 175, 261
AgeI ACCGGT 1 cut(s) 320
AluBI AGCT 9 cut(s) 457, 475, 493, 608, 615, 621, 748, 775, 1021
AluI AGCT 9 cut(s) 457, 475, 493, 608, 615, 621, 748, 775, 1021
Alw21I GWGCWC 5 cut(s) 206, 617, 623, 671, 853
Alw26I GTCTC 6 cut(s) 135, 159, 241, 246, 837, 958
AlwI GGATC 6 cut(s) 105, 118, 246, 738, 1091, 1121
Ama87I CYCGRG 1 cut(s) 616
ApeKI GCWGC 4 cut(s) 475, 493, 772, 1070
AsiGI ACCGGT 1 cut(s) 320
Asp700I GAANNNNTTC 1 cut(s) 293
AspLEI GCGC 3 cut(s) 216, 538, 1017
AsuHPI GGTGA 1 cut(s) 335
AvaI CYCGRG 1 cut(s) 616
BamHI GGATCC 1 cut(s) 110
BanII GRGCYC 2 cut(s) 617, 623
BauI CACGAG 1 cut(s) 1025
Bbv12I GWGCWC 5 cut(s) 206, 617, 623, 671, 853
BbvCI CCTCAGC 1 cut(s) 819
BbvI GCAGC 4 cut(s) 462, 480, 784, 1082
BccI CCATC 5 cut(s) 149, 184, 225, 460, 609
BceAI ACGGC 2 cut(s) 201, 409
BcoDI GTCTC 6 cut(s) 135, 159, 241, 246, 837, 958
BfaI CTAG 1 cut(s) 840
BfmI CTRYAG 1 cut(s) 1068
BisI GCNGC 5 cut(s) 124, 476, 494, 773, 1071
BlsI GCNGC 5 cut(s) 125, 477, 495, 774, 1072
BmcAI AGTACT 1 cut(s) 1138
BmeT110I CYCGRG 1 cut(s) 616
BmiI GGNNCC 2 cut(s) 112, 284
BmsI GCATC 3 cut(s) 87, 168, 955
Bpu10I CCTNAGC 1 cut(s) 819
BpuEI CTTGAG 2 cut(s) 758, 953
BsaBI GATNNNNATC 1 cut(s) 600
BsaHI GRCGYC 2 cut(s) 273, 546
BsaI GGTCTC 1 cut(s) 159
BsaWI WCCGGW 1 cut(s) 320
Bsc4I CCNNNNNNNGG 2 cut(s) 175, 261
Bse118I RCCGGY 2 cut(s) 119, 320
Bse1I ACTGG 2 cut(s) 444, 631
Bse8I GATNNNNATC 1 cut(s) 600
BseGI GGATG 3 cut(s) 72, 160, 800
BseJI GATNNNNATC 1 cut(s) 600
BseLI CCNNNNNNNGG 2 cut(s) 175, 261
BseMII CTCAG 2 cut(s) 236, 833
BseNI ACTGG 2 cut(s) 444, 631
BseRI GAGGAG 1 cut(s) 952
BseXI GCAGC 4 cut(s) 462, 480, 784, 1082
BseYI CCCAGC 1 cut(s) 1119
BsgI GTGCAG 1 cut(s) 906
Bsh1236I CGCG 4 cut(s) 214, 308, 536, 1010
Bsh1285I CGRYCG 1 cut(s) 19
BshTI ACCGGT 1 cut(s) 320
BsiEI CGRYCG 1 cut(s) 19
BsiHKAI GWGCWC 5 cut(s) 206, 617, 623, 671, 853
BsiHKCI CYCGRG 1 cut(s) 616
BsiSI CCGG 2 cut(s) 120, 321
BsiWI CGTACG 1 cut(s) 277
BslFI GGGAC 1 cut(s) 387
BslI CCNNNNNNNGG 2 cut(s) 175, 261
BsmAI GTCTC 6 cut(s) 135, 159, 241, 246, 837, 958
BsmBI CGTCTC 2 cut(s) 241, 246
BsmFI GGGAC 1 cut(s) 387
BsmI GAATGC 1 cut(s) 719
Bso31I GGTCTC 1 cut(s) 159
BsoBI CYCGRG 1 cut(s) 616
Bsp1286I GDGCHC 5 cut(s) 206, 617, 623, 671, 853
Bsp143I GATC 7 cut(s) 16, 110, 251, 435, 730, 1096, 1126
Bsp68I TCGCGA 1 cut(s) 308
BspACI CCGC 9 cut(s) 67, 76, 123, 212, 420, 478, 588, 743, 881
BspCNI CTCAG 2 cut(s) 237, 832
BspFNI CGCG 4 cut(s) 214, 308, 536, 1010
BspLI GGNNCC 2 cut(s) 112, 284
BspMAI CTGCAG 1 cut(s) 1072
BspPI GGATC 6 cut(s) 105, 118, 246, 738, 1091, 1121
BspTNI GGTCTC 1 cut(s) 159
BsrFI RCCGGY 2 cut(s) 119, 320
BsrI ACTGG 2 cut(s) 444, 631
BssAI RCCGGY 2 cut(s) 119, 320
BssMI GATC 7 cut(s) 16, 110, 251, 435, 730, 1096, 1126
BssNI GRCGYC 2 cut(s) 273, 546
BssSI CACGAG 1 cut(s) 1025
Bst2BI CACGAG 1 cut(s) 1025
Bst4CI ACNGT 6 cut(s) 201, 378, 555, 768, 848, 866
Bst6I CTCTTC 1 cut(s) 99
BstACI GRCGYC 2 cut(s) 273, 546
BstC8I GCNNGC 3 cut(s) 339, 418, 1019
BstDEI CTNAG 2 cut(s) 245, 819
BstENI CCTNNNNNAGG 1 cut(s) 173
BstF5I GGATG 3 cut(s) 72, 160, 800
BstFNI CGCG 4 cut(s) 214, 308, 536, 1010
BstHHI GCGC 3 cut(s) 216, 538, 1017
BstKTI GATC 7 cut(s) 19, 113, 254, 438, 733, 1099, 1129
BstMAI GTCTC 6 cut(s) 135, 159, 241, 246, 837, 958
BstMBI GATC 7 cut(s) 16, 110, 251, 435, 730, 1096, 1126
BstMCI CGRYCG 1 cut(s) 19
BstMWI GCNNNNNNNGC 8 cut(s) 66, 75, 132, 417, 587, 627, 1070, 1112
BstSFI CTRYAG 1 cut(s) 1068
BstUI CGCG 4 cut(s) 214, 308, 536, 1010
BstV1I GCAGC 4 cut(s) 462, 480, 784, 1082
BstX2I RGATCY 2 cut(s) 110, 1096
BstXI CCANNNNNNTGG 1 cut(s) 556
BstYI RGATCY 2 cut(s) 110, 1096
BtgZI GCGATG 1 cut(s) 64
BtsCI GGATG 3 cut(s) 72, 160, 800
BtsIMutI CAGTG 2 cut(s) 206, 591
BtuMI TCGCGA 1 cut(s) 308
Cac8I GCNNGC 3 cut(s) 339, 418, 1019
CfoI GCGC 3 cut(s) 216, 538, 1017
Cfr10I RCCGGY 2 cut(s) 119, 320
CseI GACGC 4 cut(s) 124, 361, 554, 1095
Csp6I GTAC 3 cut(s) 278, 1006, 1137
CspAI ACCGGT 1 cut(s) 320
CspCI CAANNNNNGTGG 2 cut(s) 450, 485
CviAII CATG 3 cut(s) 356, 1047, 1088
CviQI GTAC 3 cut(s) 278, 1006, 1137
DdeI CTNAG 2 cut(s) 245, 819
DpnI GATC 7 cut(s) 18, 112, 253, 437, 732, 1098, 1128
DpnII GATC 7 cut(s) 16, 110, 251, 435, 730, 1096, 1126
DraI TTTAAA 1 cut(s) 28
Eam1104I CTCTTC 1 cut(s) 99
EarI CTCTTC 1 cut(s) 99
EciI GGCGGA 2 cut(s) 577, 758
Ecl136II GAGCTC 2 cut(s) 615, 621
Eco24I GRGCYC 2 cut(s) 617, 623
Eco31I GGTCTC 1 cut(s) 159
Eco53kI GAGCTC 2 cut(s) 615, 621
Eco57I CTGAAG 1 cut(s) 1086
Eco88I CYCGRG 1 cut(s) 616
EcoICRI GAGCTC 2 cut(s) 615, 621
EcoNI CCTNNNNNAGG 1 cut(s) 173
EcoT38I GRGCYC 2 cut(s) 617, 623
Esp3I CGTCTC 2 cut(s) 241, 246
FaeI CATG 3 cut(s) 359, 1050, 1091
FaiI YATR 8 cut(s) 152, 357, 430, 678, 891, 912, 1048, 1089
FaqI GGGAC 1 cut(s) 387
FatI CATG 3 cut(s) 355, 1046, 1087
FauI CCCGC 1 cut(s) 74
Fnu4HI GCNGC 5 cut(s) 124, 476, 494, 773, 1071
FokI GGATG 3 cut(s) 59, 167, 787
FriOI GRGCYC 2 cut(s) 617, 623
Fsp4HI GCNGC 5 cut(s) 124, 476, 494, 773, 1071
FspBI CTAG 1 cut(s) 840
GlaI GCGC 3 cut(s) 215, 537, 1016
GluI GCNGC 5 cut(s) 124, 476, 494, 773, 1071
GsaI CCCAGC 1 cut(s) 1123
HapII CCGG 2 cut(s) 120, 321
HgaI GACGC 4 cut(s) 124, 361, 554, 1095
HhaI GCGC 3 cut(s) 216, 538, 1017
Hin1I GRCGYC 2 cut(s) 273, 546
Hin1II CATG 3 cut(s) 359, 1050, 1091
Hin6I GCGC 3 cut(s) 214, 536, 1015
HinP1I GCGC 3 cut(s) 214, 536, 1015
HincII GTYRAC 1 cut(s) 333
HindII GTYRAC 1 cut(s) 333
HindIII AAGCTT 2 cut(s) 606, 1019
HinfI GANTC 3 cut(s) 329, 785, 797
HpaII CCGG 2 cut(s) 120, 321
HphI GGTGA 1 cut(s) 335
Hpy166II GTNNAC 1 cut(s) 333
Hpy188I TCNGA 9 cut(s) 115, 140, 164, 246, 435, 625, 673, 790, 811
Hpy188III TCNNGA 8 cut(s) 172, 228, 307, 372, 840, 1025, 1094, 1130
Hpy8I GTNNAC 1 cut(s) 333
Hpy99I CGWCG 6 cut(s) 140, 275, 278, 355, 443, 1111
HpyAV CCTTC 6 cut(s) 169, 255, 306, 686, 692, 1110
HpyCH4III ACNGT 6 cut(s) 201, 378, 555, 768, 848, 866
HpyCH4IV ACGT 1 cut(s) 273
HpyCH4V TGCA 6 cut(s) 523, 772, 923, 946, 1064, 1070
HpyF10VI GCNNNNNNNGC 8 cut(s) 66, 75, 132, 417, 587, 627, 1070, 1112
HpyF3I CTNAG 2 cut(s) 245, 819
HpySE526I ACGT 1 cut(s) 273
Hsp92I GRCGYC 2 cut(s) 273, 546
Hsp92II CATG 3 cut(s) 359, 1050, 1091
HspAI GCGC 3 cut(s) 214, 536, 1015
Kzo9I GATC 7 cut(s) 16, 110, 251, 435, 730, 1096, 1126
LmnI GCTCC 7 cut(s) 209, 282, 472, 490, 626, 745, 780
Lsp1109I GCAGC 4 cut(s) 462, 480, 784, 1082
LweI GCATC 3 cut(s) 87, 168, 955
MaeI CTAG 1 cut(s) 840
MaeII ACGT 1 cut(s) 273
MaeIII GTNAC 3 cut(s) 53, 323, 905
MalI GATC 7 cut(s) 18, 112, 253, 437, 732, 1098, 1128
MboI GATC 7 cut(s) 16, 110, 251, 435, 730, 1096, 1126
MboII GAAGA 8 cut(s) 19, 113, 116, 301, 491, 576, 701, 983
MfeI CAATTG 1 cut(s) 779
MflI RGATCY 2 cut(s) 110, 1096
MhlI GDGCHC 5 cut(s) 206, 617, 623, 671, 853
MluCI AATT 4 cut(s) 403, 779, 805, 858
MlyI GAGTC 1 cut(s) 338
MmeI TCCRAC 3 cut(s) 118, 537, 936
MroXI GAANNNNTTC 1 cut(s) 293
MseI TTAA 1 cut(s) 27
MspI CCGG 2 cut(s) 120, 321
MunI CAATTG 1 cut(s) 779
Mva1269I GAATGC 1 cut(s) 719
MvnI CGCG 4 cut(s) 214, 308, 536, 1010
MwoI GCNNNNNNNGC 8 cut(s) 66, 75, 132, 417, 587, 627, 1070, 1112
NdeII GATC 7 cut(s) 16, 110, 251, 435, 730, 1096, 1126
NlaIII CATG 3 cut(s) 359, 1050, 1091
NlaIV GGNNCC 2 cut(s) 112, 284
NmeAIII GCCGAG 1 cut(s) 781
NmuCI GTSAC 2 cut(s) 323, 905
NruI TCGCGA 1 cut(s) 308
PaeR7I CTCGAG 1 cut(s) 616
PctI GAATGC 1 cut(s) 719
PdmI GAANNNNTTC 1 cut(s) 293
PfeI GAWTC 2 cut(s) 785, 797
Pfl23II CGTACG 1 cut(s) 277
PinAI ACCGGT 1 cut(s) 320
PkrI GCNGC 5 cut(s) 125, 477, 495, 774, 1072
Ple19I CGATCG 1 cut(s) 19
PleI GAGTC 1 cut(s) 337
PpsI GAGTC 1 cut(s) 337
Psp124BI GAGCTC 2 cut(s) 617, 623
PspFI CCCAGC 1 cut(s) 1119
PspLI CGTACG 1 cut(s) 277
PspN4I GGNNCC 2 cut(s) 112, 284
PspXI VCTCGAGB 1 cut(s) 616
PstI CTGCAG 1 cut(s) 1072
PsuI RGATCY 2 cut(s) 110, 1096
PvuI CGATCG 1 cut(s) 19
RruI TCGCGA 1 cut(s) 308
RsaI GTAC 3 cut(s) 279, 1007, 1138
RsaNI GTAC 3 cut(s) 278, 1006, 1137
SacI GAGCTC 2 cut(s) 617, 623
SaqAI TTAA 1 cut(s) 27
SatI GCNGC 5 cut(s) 124, 476, 494, 773, 1071
Sau3AI GATC 7 cut(s) 16, 110, 251, 435, 730, 1096, 1126
ScaI AGTACT 1 cut(s) 1138
SchI GAGTC 1 cut(s) 338
SduI GDGCHC 5 cut(s) 206, 617, 623, 671, 853
SfaNI GCATC 3 cut(s) 87, 168, 955
SfcI CTRYAG 1 cut(s) 1068
Sfr274I CTCGAG 1 cut(s) 616
SlaI CTCGAG 1 cut(s) 616
SmlI CTYRAG 3 cut(s) 616, 737, 932
SmoI CTYRAG 3 cut(s) 616, 737, 932
Sse9I AATT 4 cut(s) 403, 779, 805, 858
SsiI CCGC 9 cut(s) 67, 76, 123, 212, 420, 478, 588, 743, 881
SspI AATATT 1 cut(s) 577
SspMI CTAG 1 cut(s) 840
SstI GAGCTC 2 cut(s) 617, 623
TaaI ACNGT 6 cut(s) 201, 378, 555, 768, 848, 866
TaiI ACGT 1 cut(s) 276
TaqI TCGA 4 cut(s) 350, 611, 617, 1109
TasI AATT 4 cut(s) 403, 779, 805, 858
TatI WGTACW 1 cut(s) 1136
TauI GCSGC 1 cut(s) 126
TfiI GAWTC 2 cut(s) 785, 797
Tru1I TTAA 1 cut(s) 27
Tru9I TTAA 1 cut(s) 27
TscAI CASTG 2 cut(s) 206, 598
TseFI GTSAC 2 cut(s) 323, 905
TseI GCWGC 4 cut(s) 475, 493, 772, 1070
Tsp45I GTSAC 2 cut(s) 323, 905
TspDTI ATGAA 7 cut(s) 114, 587, 702, 726, 789, 885, 1035
TspGWI ACGGA 4 cut(s) 41, 295, 647, 991
TspRI CASTG 2 cut(s) 206, 598
XagI CCTNNNNNAGG 1 cut(s) 173
XbaI TCTAGA 1 cut(s) 839
XhoI CTCGAG 1 cut(s) 616
XmnI GAANNNNTTC 1 cut(s) 293
XspI CTAG 1 cut(s) 840
ZraI GACGTC 1 cut(s) 274
ZrmI AGTACT 1 cut(s) 1138
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.