AT4G38225

aminoacylase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0003926
Physical Location & Seq
Forward (+)
17927198 .. 17928901
1704 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G38225.2

Sequence Viewer

Length: 1092 bp
ATGTTATCGTCCTCCGGAAGCTCCCTCTTATGGCGGAGCCGTACACATGTGCCTGCACCGCCGCCTCGGTCTTCGCCACCGCTTAAAGCTCTCTCCTTTCCCTTCTCTTCCAGTTTATGGTTTATTCACAGAACCACAATTTCTCCTCTTTCGTGTTCAGCTGAAAGTTCCTCGGAGATTGCCCTGGCGCAGAGCCAGCCTGCCCCTGATTTCAATCCCTGGTCGGAGTTCGCTCAAAATGTGTCTGGCGAATGGGACGGTTTCGGAGCAGATTTTACATGCGAAGGGCAACCGCTAGAACTACCTGAATCAGTGGTTCCAGAAGCCTTTAGAGAATGGGAAGTGAAGGTGTTCGATTGGCAGACGCAGTGTCCCACTCTTGCCCAGCCCAACTCACTATCCTTTCTTTACAAGTCCATCAAACTCCTCCCCACCGTTGGATGTGAAGCTGATGCAGCCACCCGTTACAGCATCGACCAGAGGATCATCGGGGGAGGCAAATCCTCTGCATTAGCCTTTTCGTATTCTGTCACTGGCTCCTATGTCGCTGTGTGGCCTTTGCGGAACAACCAGCTTGAGGTGGAGCATTGTCTGATCAATCCAAAGGACAAGGAGTCTCGTGTGAGGATTTTCCAGGTTGTCAGCTTAGCAGAGACCACCAACATGTCCTTGCAGAGTGTCAAAGTTTTCTGTGAGCAGTGGTACGGTCCGTTCAGAGATGGCGATCAGCTTGGAGGCTGTGCCATCCGTAGCTCCGGCTTTGCTGCTACACCTACCACTGCAGCTTCAGTGGTTACCGGTTCTTGGAGAGTTCTACTTGCTACCACTAGCTTTCACGCCTCTGATTTCGGTTGTATACAACAAGTTACTGGCGAGAAGGTGATTGAGATTGTGAGAGAAGAAAATGATCTTTTATTGCTTCCGCAAGAGCTGTGGTGCTCACTCCAACAAGGCAAAGACCGCGAAAGAGTATTTTCAGTAGGATGGGTCTTTGAGCCAGGCCATGCTATCACATCCAGCTGCGTCTTCTCTAGCGATTCTAAGCTAAAGGAGGTAACAATGGGGAGAGAGACTGCTCTATCAGATGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

363

Amino Acids

39.9

Weight (kDa)

5.11

Isoelectric Point (pI)

46.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 117
AccI GTMKAC 1 cut(s) 856
AccII CGCG 1 cut(s) 963
AccIII TCCGGA 1 cut(s) 14
AciI CCGC 8 cut(s) 34, 59, 62, 80, 293, 562, 923, 961
AclWI GGATC 1 cut(s) 491
AcuI CTGAAG 1 cut(s) 771
AfaI GTAC 2 cut(s) 43, 704
AfiI CCNNNNNNNGG 5 cut(s) 30, 117, 437, 577, 804
AflIII ACRYGT 2 cut(s) 46, 663
AgeI ACCGGT 1 cut(s) 797
AgsI TTSAA 1 cut(s) 214
AhdI GACNNNNNGTC 2 cut(s) 369, 613
AjnI CCWGG 4 cut(s) 183, 218, 633, 997
Alw21I GWGCWC 1 cut(s) 941
Alw26I GTCTC 3 cut(s) 621, 647, 1064
AlwI GGATC 1 cut(s) 491
Aor13HI TCCGGA 1 cut(s) 14
AoxI GGCC 2 cut(s) 554, 1000
ApeKI GCWGC 4 cut(s) 455, 764, 782, 1020
AsiGI ACCGGT 1 cut(s) 797
Asp700I GAANNNNTTC 1 cut(s) 350
AspLEI GCGC 1 cut(s) 190
AspS9I GGNCC 1 cut(s) 707
AsuHPI GGTGA 1 cut(s) 892
AvaII GGWCC 1 cut(s) 707
BauI CACGAG 1 cut(s) 618
BbsI GAAGAC 2 cut(s) 63, 1018
Bbv12I GWGCWC 1 cut(s) 941
BbvI GCAGC 4 cut(s) 467, 751, 794, 1007
BccI CCATC 4 cut(s) 425, 713, 752, 978
BceAI ACGGC 1 cut(s) 24
BciT130I CCWGG 4 cut(s) 185, 220, 635, 999
BclI TGATCA 1 cut(s) 594
BcoDI GTCTC 3 cut(s) 621, 647, 1064
BfaI CTAG 3 cut(s) 296, 828, 1032
BfmI CTRYAG 1 cut(s) 780
BisI GCNGC 5 cut(s) 62, 456, 765, 783, 1021
BlpI GCTNAGC 1 cut(s) 646
BlsI GCNGC 5 cut(s) 63, 457, 766, 784, 1022
Bme1390I CCNGG 4 cut(s) 185, 220, 635, 999
Bme18I GGWCC 1 cut(s) 707
BmeRI GACNNNNNGTC 2 cut(s) 369, 613
BmgT120I GGNCC 1 cut(s) 707
BmiI GGNNCC 3 cut(s) 38, 318, 538
BmrFI CCNGG 4 cut(s) 185, 220, 635, 999
BmsI GCATC 2 cut(s) 442, 480
BpiI GAAGAC 2 cut(s) 63, 1018
Bpu1102I GCTNAGC 1 cut(s) 646
BpuEI CTTGAG 1 cut(s) 596
BsaBI GATNNNNATC 2 cut(s) 213, 723
BsaI GGTCTC 1 cut(s) 647
BsaJI CCNNGG 4 cut(s) 65, 171, 183, 218
BsaWI WCCGGW 2 cut(s) 14, 797
BsaXI ACNNNNNCTCC 2 cut(s) 127, 157
Bsc4I CCNNNNNNNGG 5 cut(s) 30, 117, 437, 577, 804
Bse118I RCCGGY 1 cut(s) 797
Bse1I ACTGG 3 cut(s) 111, 538, 874
Bse8I GATNNNNATC 2 cut(s) 213, 723
BseAI TCCGGA 1 cut(s) 14
BseBI CCWGG 4 cut(s) 185, 220, 635, 999
BseDI CCNNGG 4 cut(s) 65, 171, 183, 218
BseGI GGATG 4 cut(s) 446, 744, 989, 1013
BseJI GATNNNNATC 2 cut(s) 213, 723
BseLI CCNNNNNNNGG 5 cut(s) 30, 117, 437, 577, 804
BseNI ACTGG 3 cut(s) 111, 538, 874
BseRI GAGGAG 2 cut(s) 135, 416
BseXI GCAGC 4 cut(s) 467, 751, 794, 1007
BseYI CCCAGC 1 cut(s) 384
BsgI GTGCAG 1 cut(s) 39
Bsh1236I CGCG 1 cut(s) 963
BshFI GGCC 2 cut(s) 556, 1002
BshTI ACCGGT 1 cut(s) 797
BsiHKAI GWGCWC 1 cut(s) 941
BsiSI CCGG 3 cut(s) 15, 756, 798
BslFI GGGAC 2 cut(s) 269, 357
BslI CCNNNNNNNGG 5 cut(s) 30, 117, 437, 577, 804
BsmAI GTCTC 3 cut(s) 621, 647, 1064
BsmFI GGGAC 2 cut(s) 269, 357
BsnI GGCC 2 cut(s) 556, 1002
Bso31I GGTCTC 1 cut(s) 647
Bsp1286I GDGCHC 1 cut(s) 941
Bsp13I TCCGGA 1 cut(s) 14
Bsp143I GATC 4 cut(s) 483, 594, 724, 907
Bsp1720I GCTNAGC 1 cut(s) 646
BspACI CCGC 8 cut(s) 34, 59, 62, 80, 293, 562, 923, 961
BspANI GGCC 2 cut(s) 556, 1002
BspEI TCCGGA 1 cut(s) 14
BspFNI CGCG 1 cut(s) 963
BspLI GGNNCC 3 cut(s) 38, 318, 538
BspMAI CTGCAG 1 cut(s) 784
BspPI GGATC 1 cut(s) 491
BspTNI GGTCTC 1 cut(s) 647
BsrFI RCCGGY 1 cut(s) 797
BsrI ACTGG 3 cut(s) 111, 538, 874
BssAI RCCGGY 1 cut(s) 797
BssECI CCNNGG 4 cut(s) 65, 171, 183, 218
BssMI GATC 4 cut(s) 483, 594, 724, 907
BssNAI GTATAC 1 cut(s) 857
BssSI CACGAG 1 cut(s) 618
Bst1107I GTATAC 1 cut(s) 857
Bst2BI CACGAG 1 cut(s) 618
Bst2UI CCWGG 4 cut(s) 185, 220, 635, 999
Bst4CI ACNGT 3 cut(s) 260, 436, 707
Bst6I CTCTTC 1 cut(s) 112
BstC8I GCNNGC 3 cut(s) 54, 197, 201
BstDEI CTNAG 2 cut(s) 646, 1041
BstEII GGTNACC 1 cut(s) 793
BstF5I GGATG 4 cut(s) 446, 744, 989, 1013
BstFNI CGCG 1 cut(s) 963
BstHHI GCGC 1 cut(s) 190
BstKTI GATC 4 cut(s) 486, 597, 727, 910
BstMAI GTCTC 3 cut(s) 621, 647, 1064
BstMBI GATC 4 cut(s) 483, 594, 724, 907
BstMWI GCNNNNNNNGC 4 cut(s) 58, 196, 455, 960
BstNI CCWGG 4 cut(s) 185, 220, 635, 999
BstNSI RCATGY 3 cut(s) 50, 282, 667
BstPI GGTNACC 1 cut(s) 793
BstSCI CCNGG 4 cut(s) 183, 218, 633, 997
BstSFI CTRYAG 1 cut(s) 780
BstUI CGCG 1 cut(s) 963
BstV1I GCAGC 4 cut(s) 467, 751, 794, 1007
BstV2I GAAGAC 2 cut(s) 63, 1018
BstZ17I GTATAC 1 cut(s) 857
BsuRI GGCC 2 cut(s) 556, 1002
BtsCI GGATG 4 cut(s) 446, 744, 989, 1013
BtsI GCAGTG 3 cut(s) 374, 704, 777
BtsIMutI CAGTG 6 cut(s) 318, 374, 531, 704, 777, 795
Cac8I GCNNGC 3 cut(s) 54, 197, 201
CfoI GCGC 1 cut(s) 190
Cfr10I RCCGGY 1 cut(s) 797
Cfr13I GGNCC 1 cut(s) 707
CpoI CGGWCCG 1 cut(s) 707
CseI GACGC 2 cut(s) 373, 1012
Csp6I GTAC 2 cut(s) 42, 703
CspAI ACCGGT 1 cut(s) 797
CspCI CAANNNNNGTGG 2 cut(s) 914, 949
CspI CGGWCCG 1 cut(s) 707
CviAII CATG 4 cut(s) 47, 279, 664, 1004
CviQI GTAC 2 cut(s) 42, 703
DdeI CTNAG 2 cut(s) 646, 1041
DpnI GATC 4 cut(s) 485, 596, 726, 909
DpnII GATC 4 cut(s) 483, 594, 724, 907
DriI GACNNNNNGTC 2 cut(s) 369, 613
Eam1104I CTCTTC 1 cut(s) 112
Eam1105I GACNNNNNGTC 2 cut(s) 369, 613
EarI CTCTTC 1 cut(s) 112
EciI GGCGGA 1 cut(s) 49
Eco31I GGTCTC 1 cut(s) 647
Eco47I GGWCC 1 cut(s) 707
Eco57I CTGAAG 1 cut(s) 771
Eco91I GGTNACC 1 cut(s) 793
EcoO65I GGTNACC 1 cut(s) 793
EcoRII CCWGG 4 cut(s) 183, 218, 633, 997
FaeI CATG 4 cut(s) 50, 282, 667, 1007
FaiI YATR 9 cut(s) 31, 48, 118, 280, 543, 665, 857, 1005, 1090
FaqI GGGAC 2 cut(s) 269, 357
FatI CATG 4 cut(s) 46, 278, 663, 1003
FbaI TGATCA 1 cut(s) 594
FblI GTMKAC 1 cut(s) 856
Fnu4HI GCNGC 5 cut(s) 62, 456, 765, 783, 1021
FokI GGATG 4 cut(s) 453, 731, 996, 1000
Fsp4HI GCNGC 5 cut(s) 62, 456, 765, 783, 1021
FspBI CTAG 3 cut(s) 296, 828, 1032
GlaI GCGC 1 cut(s) 189
GluI GCNGC 5 cut(s) 62, 456, 765, 783, 1021
GsaI CCCAGC 1 cut(s) 388
HaeIII GGCC 2 cut(s) 556, 1002
HapII CCGG 3 cut(s) 15, 756, 798
HgaI GACGC 2 cut(s) 373, 1012
HhaI GCGC 1 cut(s) 190
Hin1II CATG 4 cut(s) 50, 282, 667, 1007
Hin6I GCGC 1 cut(s) 188
HinP1I GCGC 1 cut(s) 188
HinfI GANTC 3 cut(s) 308, 614, 1037
HpaII CCGG 3 cut(s) 15, 756, 798
HphI GGTGA 1 cut(s) 892
Hpy166II GTNNAC 2 cut(s) 44, 857
Hpy188I TCNGA 7 cut(s) 175, 226, 266, 594, 716, 844, 1084
Hpy188III TCNNGA 2 cut(s) 15, 320
Hpy8I GTNNAC 2 cut(s) 44, 857
HpyAV CCTTC 4 cut(s) 112, 278, 340, 871
HpyCH4III ACNGT 3 cut(s) 260, 436, 707
HpyCH4V TGCA 5 cut(s) 56, 455, 509, 673, 782
HpyF10VI GCNNNNNNNGC 4 cut(s) 58, 196, 455, 960
HpyF3I CTNAG 2 cut(s) 646, 1041
Hsp92II CATG 4 cut(s) 50, 282, 667, 1007
HspAI GCGC 1 cut(s) 188
Kpn2I TCCGGA 1 cut(s) 14
Ksp22I TGATCA 1 cut(s) 594
Kzo9I GATC 4 cut(s) 483, 594, 724, 907
LmnI GCTCC 6 cut(s) 26, 36, 266, 542, 583, 758
Lsp1109I GCAGC 4 cut(s) 467, 751, 794, 1007
LweI GCATC 2 cut(s) 442, 480
MaeI CTAG 3 cut(s) 296, 828, 1032
MaeIII GTNAC 5 cut(s) 464, 529, 793, 865, 1054
MalI GATC 4 cut(s) 485, 596, 726, 909
MboI GATC 4 cut(s) 483, 594, 724, 907
MboII GAAGA 4 cut(s) 63, 99, 911, 1018
MhlI GDGCHC 1 cut(s) 941
MluCI AATT 1 cut(s) 138
MlyI GAGTC 1 cut(s) 623
MmeI TCCRAC 3 cut(s) 204, 418, 970
MroI TCCGGA 1 cut(s) 14
MroXI GAANNNNTTC 1 cut(s) 350
MseI TTAA 1 cut(s) 84
MslI CAYNNNNRTG 1 cut(s) 662
MspA1I CMGCKG 2 cut(s) 161, 1020
MspI CCGG 3 cut(s) 15, 756, 798
MspR9I CCNGG 4 cut(s) 185, 220, 635, 999
MvaI CCWGG 4 cut(s) 185, 220, 635, 999
MvnI CGCG 1 cut(s) 963
MwoI GCNNNNNNNGC 4 cut(s) 58, 196, 455, 960
NdeII GATC 4 cut(s) 483, 594, 724, 907
NlaIII CATG 4 cut(s) 50, 282, 667, 1007
NlaIV GGNNCC 3 cut(s) 38, 318, 538
NmuCI GTSAC 1 cut(s) 529
NspI RCATGY 3 cut(s) 50, 282, 667
PciI ACATGT 2 cut(s) 46, 663
PdmI GAANNNNTTC 1 cut(s) 350
PfeI GAWTC 2 cut(s) 308, 1037
PflMI CCANNNNNTGG 1 cut(s) 117
PinAI ACCGGT 1 cut(s) 797
PkrI GCNGC 5 cut(s) 63, 457, 766, 784, 1022
PleI GAGTC 1 cut(s) 622
PpsI GAGTC 1 cut(s) 622
PscI ACATGT 2 cut(s) 46, 663
Psp6I CCWGG 4 cut(s) 183, 218, 633, 997
PspEI GGTNACC 1 cut(s) 793
PspFI CCCAGC 1 cut(s) 384
PspGI CCWGG 4 cut(s) 183, 218, 633, 997
PspN4I GGNNCC 3 cut(s) 38, 318, 538
PspPI GGNCC 1 cut(s) 707
PsrI GAACNNNNNNTAC 2 cut(s) 695, 727
PstI CTGCAG 1 cut(s) 784
PvuII CAGCTG 2 cut(s) 161, 1020
RsaI GTAC 2 cut(s) 43, 704
RsaNI GTAC 2 cut(s) 42, 703
RseI CAYNNNNRTG 1 cut(s) 662
Rsr2I CGGWCCG 1 cut(s) 707
RsrII CGGWCCG 1 cut(s) 707
SaqAI TTAA 1 cut(s) 84
SatI GCNGC 5 cut(s) 62, 456, 765, 783, 1021
Sau3AI GATC 4 cut(s) 483, 594, 724, 907
Sau96I GGNCC 1 cut(s) 707
SchI GAGTC 1 cut(s) 623
ScrFI CCNGG 4 cut(s) 185, 220, 635, 999
SduI GDGCHC 1 cut(s) 941
SfaNI GCATC 2 cut(s) 442, 480
SfcI CTRYAG 1 cut(s) 780
SinI GGWCC 1 cut(s) 707
SmiMI CAYNNNNRTG 1 cut(s) 662
SmlI CTYRAG 1 cut(s) 575
SmoI CTYRAG 1 cut(s) 575
Sse9I AATT 1 cut(s) 138
SsiI CCGC 8 cut(s) 34, 59, 62, 80, 293, 562, 923, 961
SspMI CTAG 3 cut(s) 296, 828, 1032
StyD4I CCNGG 4 cut(s) 183, 218, 633, 997
TaaI ACNGT 3 cut(s) 260, 436, 707
TaqI TCGA 2 cut(s) 354, 474
TaqII GACCGA 1 cut(s) 57
TasI AATT 1 cut(s) 138
TauI GCSGC 1 cut(s) 64
TfiI GAWTC 2 cut(s) 308, 1037
Tru1I TTAA 1 cut(s) 84
Tru9I TTAA 1 cut(s) 84
TscAI CASTG 6 cut(s) 318, 374, 538, 704, 784, 795
TseFI GTSAC 1 cut(s) 529
TseI GCWGC 4 cut(s) 455, 764, 782, 1020
Tsp45I GTSAC 1 cut(s) 529
TspGWI ACGGA 2 cut(s) 699, 737
TspRI CASTG 6 cut(s) 318, 374, 538, 704, 784, 795
Van91I CCANNNNNTGG 1 cut(s) 117
VpaK11BI GGWCC 1 cut(s) 707
XceI RCATGY 3 cut(s) 50, 282, 667
XmiI GTMKAC 1 cut(s) 856
XmnI GAANNNNTTC 1 cut(s) 350
XspI CTAG 3 cut(s) 296, 828, 1032
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.