AT5G02800
ERF Family

belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Reverse (-)
635207 .. 637568
2362 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G02800.1

Sequence Viewer

Length: 1137 bp
ATGGGTTGGATCCCGTGTTCTGGGAAATCGAGTGGGAGGAATAAGACAAGGAGGAACGGTGACCACAAACTCGACAGGAAGTCTTCTGATTGTTCTGTGTCTACTTCAGAGAAATCTAGGGCCAAGTCGTCCTTGAGTGAATCCAAAAGTAAAGGCTCTGATCACATTGTGGCACAAACGTTTACATTCTCTGAGTTAGCTACTGCCACTAGAAACTTCAGAAAAGAATGTCTTATAGGAGAAGGAGGATTTGGTAGAGTTTACAAAGGATACTTGGCCAGCACTAGCCAGACAGCGGCTATCAAGCAACTTGATCATAATGGTTTACAAGGAAACAGGGAGTTCCTCGTCGAGGTTCTCATGTTGAGTCTTCTTCATCACCCGAATCTTGTTAACTTAATAGGATATTGTGCTGATGGAGATCAAAGGCTTCTAGTCTACGAGTACATGCCCCTAGGTTCACTTGAAGATCATTTGCACGACATTTCACCTGGTAAGCAGCCACTTGACTGGAACACCAGAATGAAAATAGCTGCCGGTGCTGCAAAAGGTTTGGAGTATCTGCATGACAAAACCATGCCTCCAGTGATCTATCGAGATTTGAAATGCTCAAATATTTTGCTCGATGATGATTACTTTCCAAAGCTATCCGACTTCGGGTTGGCTAAACTTGGCCCAGTTGGGGACAAGTCTCATGTGTCCACTCGGGTTATGGGAACATACGGATACTGTGCTCCCGAGTATGCAATGACAGGCCAGCTAACACTCAAATCAGACGTTTACAGCTTCGGTGTTGTTCTGTTGGAGATTATAACTGGTCGGAAAGCAATAGACAGTTCAAGATCTACTGGAGAACAGAATCTAGTCGCATGGGCAAGGCCTTTGTTTAAAGACAGGAGGAAATTCTCTCAGATGGCTGATCCAATGCTTCAAGGTCAATACCCTCCGCGAGGGTTATACCAAGCACTCGCTGTAGCAGCGATGTGCGTACAAGAGCAGCCAAATCTTAGACCTCTCATTGCTGACGTCGTCACTGCACTTTCTTACCTCGCCTCCCAAAAGTTTGATCCTCTGGCTCAGCCAGTCCAAGGATCCCTTTTCGCTCCAGGGACTCCACCTAGATCAAAGAGGGTCTGA

Protein Analysis

378

Amino Acids

41.67

Weight (kDa)

9.15

Isoelectric Point (pI)

39.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 75 - 339 3.6e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 77 - 346 9.9e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 812
AatII GACGTC 1 cut(s) 1029
AccI GTMKAC 2 cut(s) 101, 438
AccII CGCG 1 cut(s) 949
AciI CCGC 2 cut(s) 296, 947
AclI AACGTT 1 cut(s) 179
AclWI GGATC 6 cut(s) 4, 17, 914, 1061, 1086, 1099
AcoI YGGCCR 1 cut(s) 276
AcsI RAATTY 1 cut(s) 902
AcuI CTGAAG 2 cut(s) 90, 202
AcyI GRCGYC 1 cut(s) 1026
AdeI CACNNNGTG 1 cut(s) 169
AfaI GTAC 2 cut(s) 446, 990
AfiI CCNNNNNNNGG 7 cut(s) 20, 295, 352, 657, 682, 950, 1088
AgsI TTSAA 4 cut(s) 467, 604, 840, 932
AhdI GACNNNNNGTC 1 cut(s) 79
AjnI CCWGG 2 cut(s) 490, 1105
AjuI GAANNNNNNNTTGG 2 cut(s) 234, 266
AloI GAACNNNNNNTCC 1 cut(s) 33
AluBI AGCT 5 cut(s) 200, 533, 646, 760, 786
AluI AGCT 5 cut(s) 200, 533, 646, 760, 786
Alw21I GWGCWC 1 cut(s) 736
Alw26I GTCTC 1 cut(s) 696
AlwI GGATC 6 cut(s) 4, 17, 914, 1061, 1086, 1099
Ama87I CYCGRG 2 cut(s) 705, 737
AoxI GGCC 5 cut(s) 120, 276, 673, 754, 878
ApeKI GCWGC 5 cut(s) 499, 533, 542, 977, 997
ApoI RAATTY 1 cut(s) 902
AspA2I CCTAGG 1 cut(s) 454
AspS9I GGNCC 2 cut(s) 120, 674
AsuHPI GGTGA 3 cut(s) 71, 371, 480
AvaI CYCGRG 2 cut(s) 705, 737
AvrII CCTAGG 1 cut(s) 454
BalI TGGCCA 1 cut(s) 278
BamHI GGATCC 2 cut(s) 9, 1091
BbsI GAAGAC 2 cut(s) 75, 362
Bbv12I GWGCWC 1 cut(s) 736
BbvI GCAGC 5 cut(s) 511, 520, 529, 989, 1009
BccI CCATC 2 cut(s) 410, 907
BciT130I CCWGG 2 cut(s) 492, 1107
BciVI GTATCC 2 cut(s) 263, 719
BclI TGATCA 2 cut(s) 160, 313
BcoDI GTCTC 1 cut(s) 696
BfaI CTAG 7 cut(s) 117, 210, 285, 434, 455, 863, 1119
BfmI CTRYAG 1 cut(s) 972
BfuI GTATCC 2 cut(s) 263, 719
BglII AGATCT 1 cut(s) 842
BisI GCNGC 6 cut(s) 297, 500, 534, 543, 978, 998
BlnI CCTAGG 1 cut(s) 454
BlpI GCTNAGC 1 cut(s) 1077
BlsI GCNGC 6 cut(s) 298, 501, 535, 544, 979, 999
Bme1390I CCNGG 2 cut(s) 492, 1107
BmeRI GACNNNNNGTC 1 cut(s) 79
BmeT110I CYCGRG 2 cut(s) 705, 737
BmgT120I GGNCC 2 cut(s) 120, 674
BmiI GGNNCC 2 cut(s) 11, 1093
BmrFI CCNGG 2 cut(s) 492, 1107
BmrI ACTGGG 1 cut(s) 671
BmuI ACTGGG 1 cut(s) 671
BpiI GAAGAC 2 cut(s) 75, 362
BpmI CTGGAG 3 cut(s) 567, 870, 1089
Bpu1102I GCTNAGC 1 cut(s) 1077
BpuEI CTTGAG 1 cut(s) 154
BsaBI GATNNNNATC 1 cut(s) 420
BsaHI GRCGYC 1 cut(s) 1026
BsaJI CCNNGG 3 cut(s) 454, 1087, 1106
BsaXI ACNNNNNCTCC 6 cut(s) 43, 73, 565, 595, 1037, 1067
Bsc4I CCNNNNNNNGG 7 cut(s) 20, 295, 352, 657, 682, 950, 1088
Bse118I RCCGGY 1 cut(s) 536
Bse1I ACTGG 6 cut(s) 515, 584, 677, 820, 853, 1082
Bse3DI GCAATG 2 cut(s) 753, 1017
Bse8I GATNNNNATC 1 cut(s) 420
BseBI CCWGG 2 cut(s) 492, 1107
BseDI CCNNGG 3 cut(s) 454, 1087, 1106
BseJI GATNNNNATC 1 cut(s) 420
BseLI CCNNNNNNNGG 7 cut(s) 20, 295, 352, 657, 682, 950, 1088
BseMI GCAATG 2 cut(s) 753, 1017
BseMII CTCAG 3 cut(s) 183, 923, 1091
BseNI ACTGG 6 cut(s) 515, 584, 677, 820, 853, 1082
BseXI GCAGC 5 cut(s) 511, 520, 529, 989, 1009
BsgI GTGCAG 1 cut(s) 1020
Bsh1236I CGCG 1 cut(s) 949
BshFI GGCC 5 cut(s) 122, 278, 675, 756, 880
BsiHKAI GWGCWC 1 cut(s) 736
BsiHKCI CYCGRG 2 cut(s) 705, 737
BsiSI CCGG 1 cut(s) 537
BslFI GGGAC 2 cut(s) 698, 1123
BslI CCNNNNNNNGG 7 cut(s) 20, 295, 352, 657, 682, 950, 1088
BsmAI GTCTC 1 cut(s) 696
BsmFI GGGAC 2 cut(s) 698, 1123
BsnI GGCC 5 cut(s) 122, 278, 675, 756, 880
BsoBI CYCGRG 2 cut(s) 705, 737
Bsp1286I GDGCHC 1 cut(s) 736
Bsp1720I GCTNAGC 1 cut(s) 1077
BspACI CCGC 2 cut(s) 296, 947
BspANI GGCC 5 cut(s) 122, 278, 675, 756, 880
BspCNI CTCAG 3 cut(s) 184, 922, 1090
BspFNI CGCG 1 cut(s) 949
BspLI GGNNCC 2 cut(s) 11, 1093
BspPI GGATC 6 cut(s) 4, 17, 914, 1061, 1086, 1099
BsrDI GCAATG 2 cut(s) 753, 1017
BsrFI RCCGGY 1 cut(s) 536
BsrI ACTGG 6 cut(s) 515, 584, 677, 820, 853, 1082
BssAI RCCGGY 1 cut(s) 536
BssECI CCNNGG 3 cut(s) 454, 1087, 1106
BssNI GRCGYC 1 cut(s) 1026
BssT1I CCWWGG 2 cut(s) 454, 1087
Bst2UI CCWGG 2 cut(s) 492, 1107
Bst4CI ACNGT 3 cut(s) 59, 731, 836
BstACI GRCGYC 1 cut(s) 1026
BstC8I GCNNGC 2 cut(s) 280, 758
BstDEI CTNAG 4 cut(s) 192, 909, 1007, 1077
BstEII GGTNACC 1 cut(s) 59
BstENI CCTNNNNNAGG 2 cut(s) 350, 948
BstFNI CGCG 1 cut(s) 949
BstMAI GTCTC 1 cut(s) 696
BstMWI GCNNNNNNNGC 3 cut(s) 539, 542, 977
BstNI CCWGG 2 cut(s) 492, 1107
BstNSI RCATGY 1 cut(s) 451
BstPI GGTNACC 1 cut(s) 59
BstSCI CCNGG 2 cut(s) 490, 1105
BstSFI CTRYAG 1 cut(s) 972
BstUI CGCG 1 cut(s) 949
BstV1I GCAGC 5 cut(s) 511, 520, 529, 989, 1009
BstV2I GAAGAC 2 cut(s) 75, 362
BstX2I RGATCY 3 cut(s) 9, 842, 1091
BstXI CCANNNNNNTGG 1 cut(s) 510
BstYI RGATCY 3 cut(s) 9, 842, 1091
BsuI GTATCC 2 cut(s) 263, 719
BsuRI GGCC 5 cut(s) 122, 278, 675, 756, 880
BtgZI GCGATG 1 cut(s) 995
BtsI GCAGTG 1 cut(s) 1032
BtsIMutI CAGTG 2 cut(s) 591, 1032
Cac8I GCNNGC 2 cut(s) 280, 758
Cfr10I RCCGGY 1 cut(s) 536
Cfr13I GGNCC 2 cut(s) 120, 674
CsiI ACCWGGT 1 cut(s) 490
Csp6I GTAC 2 cut(s) 445, 989
CviAII CATG 6 cut(s) 361, 448, 566, 577, 695, 870
CviQI GTAC 2 cut(s) 445, 989
DdeI CTNAG 4 cut(s) 192, 909, 1007, 1077
DraI TTTAAA 1 cut(s) 889
DraIII CACNNNGTG 1 cut(s) 169
DriI GACNNNNNGTC 1 cut(s) 79
EaeI YGGCCR 1 cut(s) 276
Eam1105I GACNNNNNGTC 1 cut(s) 79
Eco130I CCWWGG 2 cut(s) 454, 1087
Eco147I AGGCCT 1 cut(s) 880
Eco57I CTGAAG 2 cut(s) 90, 202
Eco88I CYCGRG 2 cut(s) 705, 737
Eco91I GGTNACC 1 cut(s) 59
EcoNI CCTNNNNNAGG 2 cut(s) 350, 948
EcoO65I GGTNACC 1 cut(s) 59
EcoRII CCWGG 2 cut(s) 490, 1105
EcoT14I CCWWGG 2 cut(s) 454, 1087
ErhI CCWWGG 2 cut(s) 454, 1087
FaeI CATG 6 cut(s) 364, 451, 569, 580, 698, 873
FalI AAGNNNNNCTT 6 cut(s) 116, 148, 216, 248, 1080, 1112
FaqI GGGAC 2 cut(s) 698, 1123
FatI CATG 6 cut(s) 360, 447, 565, 576, 694, 869
FbaI TGATCA 2 cut(s) 160, 313
FblI GTMKAC 2 cut(s) 101, 438
Fnu4HI GCNGC 6 cut(s) 297, 500, 534, 543, 978, 998
Fsp4HI GCNGC 6 cut(s) 297, 500, 534, 543, 978, 998
FspBI CTAG 7 cut(s) 117, 210, 285, 434, 455, 863, 1119
GluI GCNGC 6 cut(s) 297, 500, 534, 543, 978, 998
GsuI CTGGAG 3 cut(s) 567, 870, 1089
HaeIII GGCC 5 cut(s) 122, 278, 675, 756, 880
HapII CCGG 1 cut(s) 537
Hin1I GRCGYC 1 cut(s) 1026
Hin1II CATG 6 cut(s) 364, 451, 569, 580, 698, 873
HincII GTYRAC 1 cut(s) 394
HindII GTYRAC 1 cut(s) 394
HinfI GANTC 5 cut(s) 140, 367, 385, 859, 1111
HpaI GTTAAC 1 cut(s) 394
HpaII CCGG 1 cut(s) 537
HphI GGTGA 3 cut(s) 71, 371, 480
Hpy166II GTNNAC 9 cut(s) 102, 183, 262, 326, 394, 439, 461, 702, 781
Hpy188III TCNNGA 3 cut(s) 596, 737, 840
Hpy8I GTNNAC 9 cut(s) 102, 183, 262, 326, 394, 439, 461, 702, 781
Hpy99I CGWCG 2 cut(s) 353, 1031
HpyAV CCTTC 1 cut(s) 236
HpyCH4III ACNGT 3 cut(s) 59, 731, 836
HpyCH4IV ACGT 3 cut(s) 179, 777, 1026
HpyCH4V TGCA 5 cut(s) 478, 545, 565, 746, 1037
HpyF10VI GCNNNNNNNGC 3 cut(s) 539, 542, 977
HpyF3I CTNAG 4 cut(s) 192, 909, 1007, 1077
HpySE526I ACGT 3 cut(s) 179, 777, 1026
Hsp92I GRCGYC 1 cut(s) 1026
Hsp92II CATG 6 cut(s) 364, 451, 569, 580, 698, 873
Ksp22I TGATCA 2 cut(s) 160, 313
KspAI GTTAAC 1 cut(s) 394
LmnI GCTCC 2 cut(s) 739, 1108
Lsp1109I GCAGC 5 cut(s) 511, 520, 529, 989, 1009
MabI ACCWGGT 1 cut(s) 490
MaeI CTAG 7 cut(s) 117, 210, 285, 434, 455, 863, 1119
MaeII ACGT 3 cut(s) 179, 777, 1026
MaeIII GTNAC 2 cut(s) 59, 1030
MboII GAAGA 4 cut(s) 75, 362, 365, 479
MflI RGATCY 3 cut(s) 9, 842, 1091
MhlI GDGCHC 1 cut(s) 736
MlsI TGGCCA 1 cut(s) 278
MluCI AATT 1 cut(s) 902
MluNI TGGCCA 1 cut(s) 278
MlyI GAGTC 2 cut(s) 376, 1105
MmeI TCCRAC 3 cut(s) 675, 783, 800
Mox20I TGGCCA 1 cut(s) 278
MscI TGGCCA 1 cut(s) 278
MseI TTAA 3 cut(s) 393, 398, 888
MslI CAYNNNNRTG 1 cut(s) 521
Msp20I TGGCCA 1 cut(s) 278
MspA1I CMGCKG 1 cut(s) 296
MspI CCGG 1 cut(s) 537
MspR9I CCNGG 2 cut(s) 492, 1107
MvaI CCWGG 2 cut(s) 492, 1107
MvnI CGCG 1 cut(s) 949
MwoI GCNNNNNNNGC 3 cut(s) 539, 542, 977
NlaIII CATG 6 cut(s) 364, 451, 569, 580, 698, 873
NlaIV GGNNCC 2 cut(s) 11, 1093
NmuCI GTSAC 2 cut(s) 59, 1030
NspI RCATGY 1 cut(s) 451
PceI AGGCCT 1 cut(s) 880
PfeI GAWTC 3 cut(s) 140, 385, 859
PflFI GACNNNGTC 1 cut(s) 1028
PkrI GCNGC 6 cut(s) 298, 501, 535, 544, 979, 999
PleI GAGTC 2 cut(s) 375, 1105
PpsI GAGTC 2 cut(s) 375, 1105
PsiI TTATAA 1 cut(s) 812
Psp1406I AACGTT 1 cut(s) 179
Psp6I CCWGG 2 cut(s) 490, 1105
PspEI GGTNACC 1 cut(s) 59
PspGI CCWGG 2 cut(s) 490, 1105
PspN4I GGNNCC 2 cut(s) 11, 1093
PspPI GGNCC 2 cut(s) 120, 674
PsuI RGATCY 3 cut(s) 9, 842, 1091
PsyI GACNNNGTC 1 cut(s) 1028
RsaI GTAC 2 cut(s) 446, 990
RsaNI GTAC 2 cut(s) 445, 989
RseI CAYNNNNRTG 1 cut(s) 521
SaqAI TTAA 3 cut(s) 393, 398, 888
SatI GCNGC 6 cut(s) 297, 500, 534, 543, 978, 998
Sau96I GGNCC 2 cut(s) 120, 674
SchI GAGTC 2 cut(s) 376, 1105
ScrFI CCNGG 2 cut(s) 492, 1107
SduI GDGCHC 1 cut(s) 736
SexAI ACCWGGT 1 cut(s) 490
SfcI CTRYAG 1 cut(s) 972
SmiMI CAYNNNNRTG 1 cut(s) 521
SmlI CTYRAG 1 cut(s) 133
SmoI CTYRAG 1 cut(s) 133
Sse9I AATT 1 cut(s) 902
SseBI AGGCCT 1 cut(s) 880
SsiI CCGC 2 cut(s) 296, 947
SspI AATATT 1 cut(s) 616
SspMI CTAG 7 cut(s) 117, 210, 285, 434, 455, 863, 1119
StuI AGGCCT 1 cut(s) 880
StyD4I CCNGG 2 cut(s) 490, 1105
StyI CCWWGG 2 cut(s) 454, 1087
TaaI ACNGT 3 cut(s) 59, 731, 836
TaiI ACGT 3 cut(s) 182, 780, 1029
TaqI TCGA 5 cut(s) 29, 72, 351, 595, 624
TasI AATT 1 cut(s) 902
TatI WGTACW 1 cut(s) 444
TauI GCSGC 1 cut(s) 299
TfiI GAWTC 3 cut(s) 140, 385, 859
Tru1I TTAA 3 cut(s) 393, 398, 888
Tru9I TTAA 3 cut(s) 393, 398, 888
TscAI CASTG 2 cut(s) 591, 1039
TseFI GTSAC 2 cut(s) 59, 1030
TseI GCWGC 5 cut(s) 499, 533, 542, 977, 997
Tsp45I GTSAC 2 cut(s) 59, 1030
TspDTI ATGAA 2 cut(s) 365, 539
TspGWI ACGGA 1 cut(s) 738
TspRI CASTG 2 cut(s) 591, 1039
Tth111I GACNNNGTC 1 cut(s) 1028
XagI CCTNNNNNAGG 2 cut(s) 350, 948
XapI RAATTY 1 cut(s) 902
XceI RCATGY 1 cut(s) 451
XcmI CCANNNNNNNNNTGG 1 cut(s) 709
XmaJI CCTAGG 1 cut(s) 454
XmiI GTMKAC 2 cut(s) 101, 438
XspI CTAG 7 cut(s) 117, 210, 285, 434, 455, 863, 1119
ZraI GACGTC 1 cut(s) 1027
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.