Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0003976

Physical Location & Seq

Genomic Coordinates Forward (+)

24205395 .. 24208702

Gene Structure 3308 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G244400.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1176 bp

ATGGGTTGGATTCCCTGTTCTGGTAAATCCAACAGTAAAGCGAAGACCAAGAAGGAAAGGAAGAATACGATAGAGTTGCAGGAAAAGCCGCTTGATCAGATCAAACCCACTTCAGGAATTTCAAAGACAAATTCCACCTTGAGTGTCAAGGAAGATCCCAAAGATGGAGGGTCCGATCACATTGCAGCACAGACTTTTGTATTCCGTGAGTTGGCAGCTGCAACTAGAAATTTCAGAGCAGAATGTCTTTTGGGTGAGGGCGGCTTTGGTCGAGTATATAAAGGACGTTTGGAAAGTACCAATCAGGTAGTAGCTATCAAACAACTTGATCGTAATGGGTTACAAGGGAACAGGGAATTCCTTGTTGAAGTGTTGATGCTAAGTCTTCTTCACCACCCTAATCTTGTTAATCTTATTGGTTATTGTGCTGATGGAGATCAAAGGCTGCTTGTTTATGAATATATGCCCCTAGGATCTTTAGAGGACCATTTACATGATATATCACCTGGTAAGAGACGACTTGATTGGAATACAAGAATGAAAATAGCCGCTGGGGCAGCAAAGGGATTGGAGTATTTACATGACAAAGCAAGTCCTCCTGTTATTTACAGAGATTTGAAATGCTCCAACATATTGCTTGGTGAAGGGTATCATCCAAAGCTGTCCGATTTTGGCTTAGCCAAACTTGGCCCTGTTGGGGATAACACCCATGTATCTACAAGGGTTATGGGAACCTATGGATATTGTGCTCCCGAGTATGCTATGACAGGGCAGTTGACTCTTAAATCAGACGTTTATAGCTTTGGGGTAGTTCTTTTGGAAATTATAACAGGCAGGAAAGCAATTGACAATTCAAGAGCTACAGGAGAACAGAATTTGGTTGCATGGGCAAGACCCTTGTTTAAAGACCGAAAGAAATTTTCACAAATGGCAGACCCAATGCTCCAGGGTCAGTATCCCCAAAGGGGCTTGTACCAAGCTCTGGCTGTTGCGGCAATGTGTGTACAGGAGCAGCCTAATATGCGGCCAGTAATAGCTGATGTTGTCACAGCTTTGACTTACCTTGCTTCACAGAAGCACGACCAGGAAACACAGCCAGTCCAAAGCTCCCGTCTTGCCCCTTGTACACCCCCTAGAACCAAGAGGGATAGTGAAAGGAAAGCTCAATTATGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002218 GO:0002221 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0002757 GO:0002758 GO:0002764 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009814 GO:0009816 GO:0009966 GO:0009967 GO:0009987 GO:0010646 GO:0010647 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023051 GO:0023052 GO:0023056 GO:0031347 GO:0031349 GO:0036211 GO:0038023 GO:0042742 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0045088 GO:0045089 GO:0046777 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0080134 GO:0098542 GO:0140096 GO:1900457 GO:1900459 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

392

Amino Acids

43.45

Weight (kDa)

9.2

Isoelectric Point (pI)

32.94

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003976)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G02800
fragaria_vesca	FvH4_6g15040 FvH4_7g20570
malus_domestica	MD01G1114700.v1.1 MD04G1112600.v1.1 MD04G1113000.v1.1 MD07G1182700.v1.1 MD12G1129100.v1.1
prunus_persica	Prupe.2G221400_v2.0.a1 Prupe.2G221400_v2.0.a1 Prupe.6G244400_v2.0.a1 Prupe.6G244400_v2.0.a1
pyrus_communis	pycom01g14360 pycom04g10250 pycom04g10290 pycom12g12540
rosa_chinensis	RchiOBHm_Chr1g0364451 RchiOBHm_Chr3g0468211
rosa_laevigata	RLG00000024441 RLG00000027478
rosa_multiflora	Rmu_sc0001342.1_g000009 Rmu_sc0004524.1_g000006
rosa_roxburghii	Rroxscaffold_4G00291820 Rroxscaffold_4G00292260 Rroxscaffold_6G00412910
rosa_rugosa	Rorug01G0316100 Rorug03G0094200
rosa_samantha	Rh1AG324600 Rh1BG287300 Rh1DG318800 Rh3DG164000
rosa_wichuraiana	Rw1G028770 Rw3G013430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	827
AccB7I	CCANNNNNTGG	1 cut(s)	982
AciI	CCGC	5 cut(s)	89, 261, 549, 992, 1024
AclWI	GGATC	2 cut(s)	149, 481
AcoI	YGGCCR	1 cut(s)	1025
AcsI	RAATTY	6 cut(s)	117, 130, 229, 356, 874, 917
AcuI	CTGAAG	1 cut(s)	96
AfaI	GTAC	4 cut(s)	298, 974, 1005, 1126
AfiI	CCNNNNNNNGG	7 cut(s)	20, 113, 164, 211, 697, 965, 982
AgsI	TTSAA	4 cut(s)	123, 368, 619, 855
AjnI	CCWGG	3 cut(s)	505, 945, 1083
AloI	GAACNNNNNNTCC	1 cut(s)	33
Alw21I	GWGCWC	1 cut(s)	751
Alw26I	GTCTC	1 cut(s)	508
AlwI	GGATC	2 cut(s)	149, 481
Ama87I	CYCGRG	1 cut(s)	752
AoxI	GGCC	2 cut(s)	688, 1025
ApeKI	GCWGC	6 cut(s)	185, 215, 218, 445, 557, 1012
ApoI	RAATTY	6 cut(s)	117, 130, 229, 356, 874, 917
ArsI	GACNNNNNNTTYG	2 cut(s)	1096, 1128
AspA2I	CCTAGG	1 cut(s)	469
AspS9I	GGNCC	3 cut(s)	171, 484, 689
AsuHPI	GGTGA	4 cut(s)	266, 383, 495, 653
AvaI	CYCGRG	1 cut(s)	752
AvaII	GGWCC	2 cut(s)	171, 484
AvrII	CCTAGG	1 cut(s)	469
BaeI	ACNNNNGTAYC	2 cut(s)	696, 729
BbsI	GAAGAC	2 cut(s)	50, 377
Bbv12I	GWGCWC	1 cut(s)	751
BbvI	GCAGC	6 cut(s)	197, 205, 227, 432, 569, 1024
BccI	CCATC	2 cut(s)	158, 425
BcgI	CGANNNNNNTGC	4 cut(s)	58, 92, 164, 198
BciT130I	CCWGG	3 cut(s)	507, 947, 1085
BciVI	GTATCC	1 cut(s)	966
BclI	TGATCA	1 cut(s)	94
BcoDI	GTCTC	1 cut(s)	508
BfaI	CTAG	3 cut(s)	225, 470, 1134
BfmI	CTRYAG	1 cut(s)	861
BfuI	GTATCC	1 cut(s)	966
BglI	GCCNNNNNGGC	1 cut(s)	554
BlnI	CCTAGG	1 cut(s)	469
BlpI	GCTNAGC	1 cut(s)	676
Bme1390I	CCNGG	3 cut(s)	507, 947, 1085
Bme18I	GGWCC	2 cut(s)	171, 484
BmeT110I	CYCGRG	1 cut(s)	752
BmgT120I	GGNCC	3 cut(s)	171, 484, 689
BmiI	GGNNCC	2 cut(s)	172, 733
BmrFI	CCNGG	3 cut(s)	507, 947, 1085
BmsI	GCATC	1 cut(s)	366
BpiI	GAAGAC	2 cut(s)	50, 377
BpmI	CTGGAG	1 cut(s)	929
Bpu1102I	GCTNAGC	1 cut(s)	676
BpuEI	CTTGAG	1 cut(s)	160
BsaBI	GATNNNNATC	1 cut(s)	435
BsaJI	CCNNGG	2 cut(s)	469, 946
Bsc4I	CCNNNNNNNGG	7 cut(s)	20, 113, 164, 211, 697, 965, 982
Bse1I	ACTGG	2 cut(s)	1028, 1097
Bse3DI	GCAATG	2 cut(s)	180, 1002
Bse8I	GATNNNNATC	1 cut(s)	435
BseBI	CCWGG	3 cut(s)	507, 947, 1085
BseDI	CCNNGG	2 cut(s)	469, 946
BseGI	GGATG	1 cut(s)	652
BseJI	GATNNNNATC	1 cut(s)	435
BseLI	CCNNNNNNNGG	7 cut(s)	20, 113, 164, 211, 697, 965, 982
BseMI	GCAATG	2 cut(s)	180, 1002
BseNI	ACTGG	2 cut(s)	1028, 1097
BseXI	GCAGC	6 cut(s)	197, 205, 227, 432, 569, 1024
BseYI	CCCAGC	1 cut(s)	551
BshFI	GGCC	2 cut(s)	690, 1027
BsiHKAI	GWGCWC	1 cut(s)	751
BsiHKCI	CYCGRG	1 cut(s)	752
BslI	CCNNNNNNNGG	7 cut(s)	20, 113, 164, 211, 697, 965, 982
BsmAI	GTCTC	1 cut(s)	508
BsmBI	CGTCTC	1 cut(s)	508
BsnI	GGCC	2 cut(s)	690, 1027
BsoBI	CYCGRG	1 cut(s)	752
Bsp1286I	GDGCHC	1 cut(s)	751
Bsp1407I	TGTACA	2 cut(s)	1003, 1124
Bsp143I	GATC	7 cut(s)	94, 99, 154, 175, 328, 436, 473
Bsp1720I	GCTNAGC	1 cut(s)	676
BspACI	CCGC	5 cut(s)	89, 261, 549, 992, 1024
BspANI	GGCC	2 cut(s)	690, 1027
BspLI	GGNNCC	2 cut(s)	172, 733
BspPI	GGATC	2 cut(s)	149, 481
BsrDI	GCAATG	2 cut(s)	180, 1002
BsrGI	TGTACA	2 cut(s)	1003, 1124
BsrI	ACTGG	2 cut(s)	1028, 1097
BssECI	CCNNGG	2 cut(s)	469, 946
BssMI	GATC	7 cut(s)	94, 99, 154, 175, 328, 436, 473
BssT1I	CCWWGG	1 cut(s)	469
Bst2UI	CCWGG	3 cut(s)	507, 947, 1085
Bst4CI	ACNGT	1 cut(s)	35
BstAUI	TGTACA	2 cut(s)	1003, 1124
BstDEI	CTNAG	2 cut(s)	380, 676
BstF5I	GGATG	1 cut(s)	652
BstKTI	GATC	7 cut(s)	97, 102, 157, 178, 331, 439, 476
BstMAI	GTCTC	1 cut(s)	508
BstMBI	GATC	7 cut(s)	94, 99, 154, 175, 328, 436, 473
BstMWI	GCNNNNNNNGC	5 cut(s)	85, 554, 557, 992, 1021
BstNI	CCWGG	3 cut(s)	507, 947, 1085
BstSCI	CCNGG	3 cut(s)	505, 945, 1083
BstSFI	CTRYAG	1 cut(s)	861
BstV1I	GCAGC	6 cut(s)	197, 205, 227, 432, 569, 1024
BstV2I	GAAGAC	2 cut(s)	50, 377
BstX2I	RGATCY	2 cut(s)	154, 473
BstYI	RGATCY	2 cut(s)	154, 473
BsuI	GTATCC	1 cut(s)	966
BsuRI	GGCC	2 cut(s)	690, 1027
BtsCI	GGATG	1 cut(s)	652
Cfr13I	GGNCC	3 cut(s)	171, 484, 689
CsiI	ACCWGGT	1 cut(s)	505
Csp6I	GTAC	4 cut(s)	297, 973, 1004, 1125
CviAII	CATG	4 cut(s)	494, 581, 710, 885
CviQI	GTAC	4 cut(s)	297, 973, 1004, 1125
DdeI	CTNAG	2 cut(s)	380, 676
DpnI	GATC	7 cut(s)	96, 101, 156, 177, 330, 438, 475
DpnII	GATC	7 cut(s)	94, 99, 154, 175, 328, 436, 473
DraI	TTTAAA	1 cut(s)	904
EaeI	YGGCCR	1 cut(s)	1025
Eco130I	CCWWGG	1 cut(s)	469
Eco47I	GGWCC	2 cut(s)	171, 484
Eco57I	CTGAAG	1 cut(s)	96
Eco88I	CYCGRG	1 cut(s)	752
EcoRI	GAATTC	1 cut(s)	356
EcoRII	CCWGG	3 cut(s)	505, 945, 1083
EcoT14I	CCWWGG	1 cut(s)	469
ErhI	CCWWGG	1 cut(s)	469
Esp3I	CGTCTC	1 cut(s)	508
FaeI	CATG	4 cut(s)	497, 584, 713, 888
FatI	CATG	4 cut(s)	493, 580, 709, 884
FbaI	TGATCA	1 cut(s)	94
FokI	GGATG	1 cut(s)	639
FspBI	CTAG	3 cut(s)	225, 470, 1134
GsaI	CCCAGC	1 cut(s)	555
GsuI	CTGGAG	1 cut(s)	929
HaeIII	GGCC	2 cut(s)	690, 1027
Hin1II	CATG	4 cut(s)	497, 584, 713, 888
HincII	GTYRAC	1 cut(s)	777
HindII	GTYRAC	1 cut(s)	777
HinfI	GANTC	2 cut(s)	10, 778
HphI	GGTGA	4 cut(s)	266, 383, 495, 653
Hpy166II	GTNNAC	3 cut(s)	777, 1004, 1127
Hpy188I	TCNGA	5 cut(s)	99, 175, 236, 667, 790
Hpy188III	TCNNGA	3 cut(s)	114, 752, 855
Hpy8I	GTNNAC	3 cut(s)	777, 1004, 1127
HpyAV	CCTTC	2 cut(s)	46, 638
HpyCH4III	ACNGT	1 cut(s)	35
HpyCH4IV	ACGT	2 cut(s)	286, 792
HpyCH4V	TGCA	4 cut(s)	79, 185, 221, 884
HpyF10VI	GCNNNNNNNGC	5 cut(s)	85, 554, 557, 992, 1021
HpyF3I	CTNAG	2 cut(s)	380, 676
HpySE526I	ACGT	2 cut(s)	286, 792
Hsp92II	CATG	4 cut(s)	497, 584, 713, 888
Ksp22I	TGATCA	1 cut(s)	94
Kzo9I	GATC	7 cut(s)	94, 99, 154, 175, 328, 436, 473
LmnI	GCTCC	5 cut(s)	629, 754, 948, 1009, 1112
Lsp1109I	GCAGC	6 cut(s)	197, 205, 227, 432, 569, 1024
LweI	GCATC	1 cut(s)	366
MabI	ACCWGGT	1 cut(s)	505
MaeI	CTAG	3 cut(s)	225, 470, 1134
MaeII	ACGT	2 cut(s)	286, 792
MaeIII	GTNAC	2 cut(s)	339, 1045
MalI	GATC	7 cut(s)	96, 101, 156, 177, 330, 438, 475
MboI	GATC	7 cut(s)	94, 99, 154, 175, 328, 436, 473
MboII	GAAGA	5 cut(s)	55, 73, 164, 377, 380
MfeI	CAATTG	1 cut(s)	843
MflI	RGATCY	2 cut(s)	154, 473
MhlI	GDGCHC	1 cut(s)	751
MlyI	GAGTC	1 cut(s)	772
MmeI	TCCRAC	2 cut(s)	54, 651
MnlI	CCTC	5 cut(s)	161, 250, 475, 606, 1137
MseI	TTAA	3 cut(s)	408, 783, 903
MslI	CAYNNNNRTG	1 cut(s)	492
MspA1I	CMGCKG	2 cut(s)	218, 551
MspR9I	CCNGG	3 cut(s)	507, 947, 1085
MunI	CAATTG	1 cut(s)	843
MvaI	CCWGG	3 cut(s)	507, 947, 1085
MwoI	GCNNNNNNNGC	5 cut(s)	85, 554, 557, 992, 1021
NdeII	GATC	7 cut(s)	94, 99, 154, 175, 328, 436, 473
NlaIII	CATG	4 cut(s)	497, 584, 713, 888
NlaIV	GGNNCC	2 cut(s)	172, 733
NmuCI	GTSAC	1 cut(s)	1045
PfeI	GAWTC	1 cut(s)	10
PflMI	CCANNNNNTGG	1 cut(s)	982
PleI	GAGTC	1 cut(s)	772
PpsI	GAGTC	1 cut(s)	772
PsiI	TTATAA	1 cut(s)	827
Psp6I	CCWGG	3 cut(s)	505, 945, 1083
PspFI	CCCAGC	1 cut(s)	551
PspGI	CCWGG	3 cut(s)	505, 945, 1083
PspN4I	GGNNCC	2 cut(s)	172, 733
PspPI	GGNCC	3 cut(s)	171, 484, 689
PsuI	RGATCY	2 cut(s)	154, 473
PvuII	CAGCTG	1 cut(s)	218
RsaI	GTAC	4 cut(s)	298, 974, 1005, 1126
RsaNI	GTAC	4 cut(s)	297, 973, 1004, 1125
RseI	CAYNNNNRTG	1 cut(s)	492
SaqAI	TTAA	3 cut(s)	408, 783, 903
Sau3AI	GATC	7 cut(s)	94, 99, 154, 175, 328, 436, 473
Sau96I	GGNCC	3 cut(s)	171, 484, 689
SchI	GAGTC	1 cut(s)	772
ScrFI	CCNGG	3 cut(s)	507, 947, 1085
SduI	GDGCHC	1 cut(s)	751
SexAI	ACCWGGT	1 cut(s)	505
SfaNI	GCATC	1 cut(s)	366
SfcI	CTRYAG	1 cut(s)	861
SinI	GGWCC	2 cut(s)	171, 484
SmiMI	CAYNNNNRTG	1 cut(s)	492
SmlI	CTYRAG	1 cut(s)	139
SmoI	CTYRAG	1 cut(s)	139
SsiI	CCGC	5 cut(s)	89, 261, 549, 992, 1024
SspMI	CTAG	3 cut(s)	225, 470, 1134
StyD4I	CCNGG	3 cut(s)	505, 945, 1083
StyI	CCWWGG	1 cut(s)	469
TaaI	ACNGT	1 cut(s)	35
TaiI	ACGT	2 cut(s)	289, 795
TaqI	TCGA	1 cut(s)	271
TaqII	GACCGA	1 cut(s)	924
TatI	WGTACW	2 cut(s)	1003, 1124
TauI	GCSGC	5 cut(s)	91, 264, 551, 995, 1027
TfiI	GAWTC	1 cut(s)	10
Tru1I	TTAA	3 cut(s)	408, 783, 903
Tru9I	TTAA	3 cut(s)	408, 783, 903
TseFI	GTSAC	1 cut(s)	1045
TseI	GCWGC	6 cut(s)	185, 215, 218, 445, 557, 1012
Tsp45I	GTSAC	1 cut(s)	1045
TspDTI	ATGAA	2 cut(s)	471, 554
TspGWI	ACGGA	1 cut(s)	194
Van91I	CCANNNNNTGG	1 cut(s)	982
VpaK11BI	GGWCC	2 cut(s)	171, 484
XapI	RAATTY	6 cut(s)	117, 130, 229, 356, 874, 917
XmaJI	CCTAGG	1 cut(s)	469
XspI	CTAG	3 cut(s)	225, 470, 1134

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.