Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0003976

Physical Location & Seq

Genomic Coordinates Forward (+)

24943017 .. 24947205

Gene Structure 4189 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G221400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1128 bp

ATGAGTTGGTTCCTGTGTTCTGGCAAATCAAGCAAAAATGCAAAGAAGAAGAAGCAGAAGAATAAGCCAGAAGATCAGATCCCATCAATTTCAGAACAACTGAAGGCAAATTCAGCACTGTCTGTAAAGGACTCTAAGGATGGAGGGTCTGATCACATTGCAGCACATACATTTACATTTCGTGAATTGGCAGCTGCAACAAAGAATTTTAGAGCAGATTGTATTTTGGGAGAAGGAGGTTTCGGTCAAGTATATAAAGGGCGCTTGGAGAGTACTAATAAGGTAGTGGCCATAAAGCAACTTGATTCCAATGGGCTTCAAGGGAACAGGGAATTCCTTGTTGAAGTATTAATGTTAAGCCTACTTCACCATCCCAATCTTGTTAACTTAATAGGCTATTGTGCTGATGGTGATCAGAGGCTTTTGGTATACGAGTACATGCCATTGGGATCTTTGGAAGATCATCTACATGATCTACCACCAGACAGAAAACAACTTGACTGGAATACAAGAATGAAAATAGCTGCTGGTGCGGCAAAGGGCTTGGAGTATTTGCACGACAAAGCTAACCCCCCTGTTATTTATCGTGATCTTAAATGCTCAAACATTTTACTTGGTGAAGGCTACTATCCTAAGCTATCTGATTTTGGCTTGGCAAAGTTAGGTCCTGTAGGAGACAACACTCATGTTTCCACTAGGGTGATGGGAACCTATGGATATTGTGCGCCTGAATATGCAATGACTGGTCAGCTCACATTGAAATCAGATGTATACAGCTTTGGGGTTGTTCTTTTGGAAATCATTACCGGAAGAAAGGCAATTGACAATTCGAGGGCTGCTGGGGAACACAATTTGGTTGCATGGGCCCGCCCCTTGTTTAAGGATCGGAGGAAATTTTGGCAGATTGCTGATCCACTGCTCCAAGGTCAGTATCCGGTGAGGGGAATGTATCAAGCTCTTGCCGTTGCTGCAATGTGTGTCCAGGAGCAGCCTAATATGCGACCTCTCATAGCTGATGTTGTCACAGCCCTTACTTACCTTGCTTCCCAAAAATATGATCCTGAAACGCGGTCAGTACAGAGCTCTCGCACAAGCTCATCCACTCCTAGACCTAGAAGGGAACTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002218 GO:0002221 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0002757 GO:0002758 GO:0002764 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009814 GO:0009816 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0031347 GO:0031349 GO:0036211 GO:0038023 GO:0042742 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0045088 GO:0045089 GO:0046777 GO:0048518 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0080134 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

376

Amino Acids

41.67

Weight (kDa)

9.09

Isoelectric Point (pI)

34.71

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003976)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G02800
fragaria_vesca	FvH4_6g15040 FvH4_7g20570
malus_domestica	MD01G1114700.v1.1 MD04G1112600.v1.1 MD04G1113000.v1.1 MD07G1182700.v1.1 MD12G1129100.v1.1
prunus_persica	Prupe.2G221400_v2.0.a1 Prupe.2G221400_v2.0.a1 Prupe.6G244400_v2.0.a1 Prupe.6G244400_v2.0.a1
pyrus_communis	pycom01g14360 pycom04g10250 pycom04g10290 pycom12g12540
rosa_chinensis	RchiOBHm_Chr1g0364451 RchiOBHm_Chr3g0468211
rosa_laevigata	RLG00000024441 RLG00000027478
rosa_multiflora	Rmu_sc0001342.1_g000009 Rmu_sc0004524.1_g000006
rosa_roxburghii	Rroxscaffold_4G00291820 Rroxscaffold_4G00292260 Rroxscaffold_6G00412910
rosa_rugosa	Rorug01G0316100 Rorug03G0094200
rosa_samantha	Rh1AG324600 Rh1BG287300 Rh1DG318800 Rh3DG164000
rosa_wichuraiana	Rw1G028770 Rw3G013430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	2 cut(s)	429, 771
AccII	CGCG	1 cut(s)	1069
AciI	CCGC	3 cut(s)	533, 868, 1069
AclWI	GGATC	5 cut(s)	73, 457, 891, 905, 1052
AcoI	YGGCCR	1 cut(s)	288
AcsI	RAATTY	4 cut(s)	109, 205, 332, 893
AcuI	CTGAAG	1 cut(s)	122
AfaI	GTAC	3 cut(s)	274, 437, 1077
AfiI	CCNNNNNNNGG	1 cut(s)	941
AgsI	TTSAA	3 cut(s)	320, 344, 760
AjnI	CCWGG	1 cut(s)	981
AleI	CACNNNNGTG	1 cut(s)	698
Alw21I	GWGCWC	1 cut(s)	1085
Alw26I	GTCTC	1 cut(s)	669
AlwI	GGATC	5 cut(s)	73, 457, 891, 905, 1052
AoxI	GGCC	2 cut(s)	288, 864
ApaI	GGGCCC	1 cut(s)	868
ApeKI	GCWGC	7 cut(s)	161, 191, 194, 524, 836, 968, 988
ApoI	RAATTY	4 cut(s)	109, 205, 332, 893
AseI	ATTAAT	1 cut(s)	350
AspLEI	GCGC	2 cut(s)	264, 727
AspS9I	GGNCC	3 cut(s)	665, 864, 865
AsuHPI	GGTGA	5 cut(s)	359, 422, 629, 712, 949
AvaII	GGWCC	1 cut(s)	665
BaeGI	GKGCMC	1 cut(s)	868
BalI	TGGCCA	1 cut(s)	290
BanII	GRGCYC	2 cut(s)	868, 1085
BarI	GAAGNNNNNNTAC	2 cut(s)	450, 482
Bbv12I	GWGCWC	1 cut(s)	1085
BbvI	GCAGC	7 cut(s)	173, 181, 203, 511, 823, 955, 1000
BccI	CCATC	5 cut(s)	91, 134, 378, 401, 697
BceAI	ACGGC	1 cut(s)	947
BciT130I	CCWGG	1 cut(s)	983
BciVI	GTATCC	1 cut(s)	942
BclI	TGATCA	2 cut(s)	151, 412
BcoDI	GTCTC	1 cut(s)	669
BfaI	CTAG	3 cut(s)	696, 1107, 1113
BfmI	CTRYAG	1 cut(s)	669
BfoI	RGCGCY	1 cut(s)	265
BfuI	GTATCC	1 cut(s)	942
BisI	GCNGC	8 cut(s)	162, 192, 195, 525, 534, 837, 969, 989
BlsI	GCNGC	8 cut(s)	163, 193, 196, 526, 535, 838, 970, 990
BmcAI	AGTACT	1 cut(s)	274
Bme1390I	CCNGG	1 cut(s)	983
Bme18I	GGWCC	1 cut(s)	665
BmgT120I	GGNCC	3 cut(s)	665, 864, 865
BmiI	GGNNCC	3 cut(s)	11, 709, 866
BmrFI	CCNGG	1 cut(s)	983
Bpu10I	CCTNAGC	1 cut(s)	633
BsaBI	GATNNNNATC	1 cut(s)	411
BsaJI	CCNNGG	1 cut(s)	922
BsaWI	WCCGGW	2 cut(s)	806, 934
Bsc4I	CCNNNNNNNGG	1 cut(s)	941
Bse1I	ACTGG	2 cut(s)	506, 748
Bse3DI	GCAATG	3 cut(s)	156, 744, 978
Bse8I	GATNNNNATC	1 cut(s)	411
BseBI	CCWGG	1 cut(s)	983
BseDI	CCNNGG	1 cut(s)	922
BseGI	GGATG	3 cut(s)	145, 370, 1097
BseJI	GATNNNNATC	1 cut(s)	411
BseLI	CCNNNNNNNGG	1 cut(s)	941
BseMI	GCAATG	3 cut(s)	156, 744, 978
BseNI	ACTGG	2 cut(s)	506, 748
BseSI	GKGCMC	1 cut(s)	868
BseXI	GCAGC	7 cut(s)	173, 181, 203, 511, 823, 955, 1000
BseYI	CCCAGC	1 cut(s)	839
Bsh1236I	CGCG	1 cut(s)	1069
BshFI	GGCC	2 cut(s)	290, 866
BsiHKAI	GWGCWC	1 cut(s)	1085
BsiSI	CCGG	2 cut(s)	807, 935
BslI	CCNNNNNNNGG	1 cut(s)	941
BsmAI	GTCTC	1 cut(s)	669
BsnI	GGCC	2 cut(s)	290, 866
Bsp120I	GGGCCC	1 cut(s)	864
Bsp1286I	GDGCHC	2 cut(s)	868, 1085
BspACI	CCGC	3 cut(s)	533, 868, 1069
BspANI	GGCC	2 cut(s)	290, 866
BspFNI	CGCG	1 cut(s)	1069
BspLI	GGNNCC	3 cut(s)	11, 709, 866
BspPI	GGATC	5 cut(s)	73, 457, 891, 905, 1052
BsrDI	GCAATG	3 cut(s)	156, 744, 978
BsrI	ACTGG	2 cut(s)	506, 748
BssECI	CCNNGG	1 cut(s)	922
BssNAI	GTATAC	2 cut(s)	430, 772
BssT1I	CCWWGG	1 cut(s)	922
Bst1107I	GTATAC	2 cut(s)	430, 772
Bst2UI	CCWGG	1 cut(s)	983
Bst4CI	ACNGT	2 cut(s)	120, 1125
BstC8I	GCNNGC	1 cut(s)	868
BstDEI	CTNAG	2 cut(s)	135, 633
BstF5I	GGATG	3 cut(s)	145, 370, 1097
BstFNI	CGCG	1 cut(s)	1069
BstH2I	RGCGCY	1 cut(s)	265
BstHHI	GCGC	2 cut(s)	264, 727
BstMAI	GTCTC	1 cut(s)	669
BstMWI	GCNNNNNNNGC	6 cut(s)	30, 113, 530, 533, 968, 997
BstNI	CCWGG	1 cut(s)	983
BstNSI	RCATGY	1 cut(s)	442
BstSCI	CCNGG	1 cut(s)	981
BstSFI	CTRYAG	1 cut(s)	669
BstSLI	GKGCMC	1 cut(s)	868
BstUI	CGCG	1 cut(s)	1069
BstV1I	GCAGC	7 cut(s)	173, 181, 203, 511, 823, 955, 1000
BstX2I	RGATCY	2 cut(s)	78, 449
BstYI	RGATCY	2 cut(s)	78, 449
BstZ17I	GTATAC	2 cut(s)	430, 772
BsuI	GTATCC	1 cut(s)	942
BsuRI	GGCC	2 cut(s)	290, 866
BtsCI	GGATG	3 cut(s)	145, 370, 1097
BtsI	GCAGTG	1 cut(s)	914
BtsIMutI	CAGTG	2 cut(s)	116, 914
Cac8I	GCNNGC	1 cut(s)	868
CfoI	GCGC	2 cut(s)	264, 727
Cfr13I	GGNCC	3 cut(s)	665, 864, 865
Csp6I	GTAC	3 cut(s)	273, 436, 1076
CviAII	CATG	4 cut(s)	439, 470, 686, 861
CviQI	GTAC	3 cut(s)	273, 436, 1076
DdeI	CTNAG	2 cut(s)	135, 633
EaeI	YGGCCR	1 cut(s)	288
Ecl136II	GAGCTC	1 cut(s)	1083
Eco130I	CCWWGG	1 cut(s)	922
Eco24I	GRGCYC	2 cut(s)	868, 1085
Eco47I	GGWCC	1 cut(s)	665
Eco53kI	GAGCTC	1 cut(s)	1083
Eco57I	CTGAAG	1 cut(s)	122
EcoICRI	GAGCTC	1 cut(s)	1083
EcoO109I	RGGNCCY	1 cut(s)	665
EcoRI	GAATTC	1 cut(s)	332
EcoRII	CCWGG	1 cut(s)	981
EcoT14I	CCWWGG	1 cut(s)	922
EcoT38I	GRGCYC	2 cut(s)	868, 1085
ErhI	CCWWGG	1 cut(s)	922
FaeI	CATG	4 cut(s)	442, 473, 689, 864
FatI	CATG	4 cut(s)	438, 469, 685, 860
FauI	CCCGC	1 cut(s)	875
FbaI	TGATCA	2 cut(s)	151, 412
FblI	GTMKAC	2 cut(s)	429, 771
Fnu4HI	GCNGC	8 cut(s)	162, 192, 195, 525, 534, 837, 969, 989
FokI	GGATG	3 cut(s)	152, 357, 1084
FriOI	GRGCYC	2 cut(s)	868, 1085
Fsp4HI	GCNGC	8 cut(s)	162, 192, 195, 525, 534, 837, 969, 989
FspBI	CTAG	3 cut(s)	696, 1107, 1113
GlaI	GCGC	2 cut(s)	263, 726
GluI	GCNGC	8 cut(s)	162, 192, 195, 525, 534, 837, 969, 989
GsaI	CCCAGC	1 cut(s)	843
HaeII	RGCGCY	1 cut(s)	265
HaeIII	GGCC	2 cut(s)	290, 866
HapII	CCGG	2 cut(s)	807, 935
HhaI	GCGC	2 cut(s)	264, 727
Hin1II	CATG	4 cut(s)	442, 473, 689, 864
Hin6I	GCGC	2 cut(s)	262, 725
HinP1I	GCGC	2 cut(s)	262, 725
HincII	GTYRAC	1 cut(s)	385
HindII	GTYRAC	1 cut(s)	385
HinfI	GANTC	2 cut(s)	131, 305
HpaI	GTTAAC	1 cut(s)	385
HpaII	CCGG	2 cut(s)	807, 935
HphI	GGTGA	5 cut(s)	359, 422, 629, 712, 949
Hpy166II	GTNNAC	3 cut(s)	385, 430, 772
Hpy188I	TCNGA	7 cut(s)	78, 94, 151, 417, 643, 766, 888
Hpy188III	TCNNGA	3 cut(s)	182, 587, 1061
Hpy8I	GTNNAC	3 cut(s)	385, 430, 772
HpyAV	CCTTC	4 cut(s)	97, 227, 614, 1110
HpyCH4III	ACNGT	2 cut(s)	120, 1125
HpyCH4V	TGCA	7 cut(s)	41, 161, 197, 556, 737, 860, 971
HpyF10VI	GCNNNNNNNGC	6 cut(s)	30, 113, 530, 533, 968, 997
HpyF3I	CTNAG	2 cut(s)	135, 633
Hsp92II	CATG	4 cut(s)	442, 473, 689, 864
HspAI	GCGC	2 cut(s)	262, 725
Ksp22I	TGATCA	2 cut(s)	151, 412
KspAI	GTTAAC	1 cut(s)	385
LmnI	GCTCC	2 cut(s)	924, 985
Lsp1109I	GCAGC	7 cut(s)	173, 181, 203, 511, 823, 955, 1000
MaeI	CTAG	3 cut(s)	696, 1107, 1113
MaeIII	GTNAC	1 cut(s)	1021
MboII	GAAGA	6 cut(s)	58, 61, 70, 83, 470, 822
MfeI	CAATTG	1 cut(s)	819
MflI	RGATCY	2 cut(s)	78, 449
MhlI	GDGCHC	2 cut(s)	868, 1085
MlsI	TGGCCA	1 cut(s)	290
MluCI	AATT	9 cut(s)	87, 109, 185, 205, 332, 819, 826, 850, 893
MluNI	TGGCCA	1 cut(s)	290
MlyI	GAGTC	1 cut(s)	125
MnlI	CCTC	7 cut(s)	137, 230, 411, 825, 882, 933, 1014
Mox20I	TGGCCA	1 cut(s)	290
MscI	TGGCCA	1 cut(s)	290
MseI	TTAA	6 cut(s)	350, 356, 384, 389, 594, 879
MslI	CAYNNNNRTG	2 cut(s)	468, 698
Msp20I	TGGCCA	1 cut(s)	290
MspA1I	CMGCKG	1 cut(s)	194
MspI	CCGG	2 cut(s)	807, 935
MspR9I	CCNGG	1 cut(s)	983
MunI	CAATTG	1 cut(s)	819
MvaI	CCWGG	1 cut(s)	983
MvnI	CGCG	1 cut(s)	1069
MwoI	GCNNNNNNNGC	6 cut(s)	30, 113, 530, 533, 968, 997
NlaIII	CATG	4 cut(s)	442, 473, 689, 864
NlaIV	GGNNCC	3 cut(s)	11, 709, 866
NmuCI	GTSAC	1 cut(s)	1021
NspI	RCATGY	1 cut(s)	442
OliI	CACNNNNGTG	1 cut(s)	698
PfeI	GAWTC	1 cut(s)	305
PfoI	TCCNGGA	1 cut(s)	981
PkrI	GCNGC	8 cut(s)	163, 193, 196, 526, 535, 838, 970, 990
PleI	GAGTC	1 cut(s)	125
PpsI	GAGTC	1 cut(s)	125
PpuMI	RGGWCCY	1 cut(s)	665
PshBI	ATTAAT	1 cut(s)	350
Psp124BI	GAGCTC	1 cut(s)	1085
Psp5II	RGGWCCY	1 cut(s)	665
Psp6I	CCWGG	1 cut(s)	981
PspFI	CCCAGC	1 cut(s)	839
PspGI	CCWGG	1 cut(s)	981
PspN4I	GGNNCC	3 cut(s)	11, 709, 866
PspOMI	GGGCCC	1 cut(s)	864
PspPI	GGNCC	3 cut(s)	665, 864, 865
PspPPI	RGGWCCY	1 cut(s)	665
PsuI	RGATCY	2 cut(s)	78, 449
PvuII	CAGCTG	1 cut(s)	194
RsaI	GTAC	3 cut(s)	274, 437, 1077
RsaNI	GTAC	3 cut(s)	273, 436, 1076
RseI	CAYNNNNRTG	2 cut(s)	468, 698
SacI	GAGCTC	1 cut(s)	1085
SaqAI	TTAA	6 cut(s)	350, 356, 384, 389, 594, 879
SatI	GCNGC	8 cut(s)	162, 192, 195, 525, 534, 837, 969, 989
Sau96I	GGNCC	3 cut(s)	665, 864, 865
ScaI	AGTACT	1 cut(s)	274
SchI	GAGTC	1 cut(s)	125
ScrFI	CCNGG	1 cut(s)	983
SduI	GDGCHC	2 cut(s)	868, 1085
SfcI	CTRYAG	1 cut(s)	669
SinI	GGWCC	1 cut(s)	665
SmiMI	CAYNNNNRTG	2 cut(s)	468, 698
Sse9I	AATT	9 cut(s)	87, 109, 185, 205, 332, 819, 826, 850, 893
SsiI	CCGC	3 cut(s)	533, 868, 1069
SspMI	CTAG	3 cut(s)	696, 1107, 1113
SstI	GAGCTC	1 cut(s)	1085
StyD4I	CCNGG	1 cut(s)	981
StyI	CCWWGG	1 cut(s)	922
TaaI	ACNGT	2 cut(s)	120, 1125
TaqI	TCGA	1 cut(s)	830
TaqII	GACCGA	1 cut(s)	233
TasI	AATT	9 cut(s)	87, 109, 185, 205, 332, 819, 826, 850, 893
TatI	WGTACW	3 cut(s)	272, 435, 1075
TauI	GCSGC	1 cut(s)	536
TfiI	GAWTC	1 cut(s)	305
Tru1I	TTAA	6 cut(s)	350, 356, 384, 389, 594, 879
Tru9I	TTAA	6 cut(s)	350, 356, 384, 389, 594, 879
TscAI	CASTG	2 cut(s)	123, 921
TseFI	GTSAC	1 cut(s)	1021
TseI	GCWGC	7 cut(s)	161, 191, 194, 524, 836, 968, 988
Tsp45I	GTSAC	1 cut(s)	1021
TspDTI	ATGAA	1 cut(s)	530
TspRI	CASTG	2 cut(s)	123, 921
VpaK11BI	GGWCC	1 cut(s)	665
VspI	ATTAAT	1 cut(s)	350
XapI	RAATTY	4 cut(s)	109, 205, 332, 893
XceI	RCATGY	1 cut(s)	442
XcmI	CCANNNNNNNNNTGG	1 cut(s)	700
XmiI	GTMKAC	2 cut(s)	429, 771
XspI	CTAG	3 cut(s)	696, 1107, 1113
ZrmI	AGTACT	1 cut(s)	274

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.