Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003353

Physical Location & Seq

Genomic Coordinates Forward (+)

1384471 .. 1386447

Gene Structure 1977 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G04780.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1908 bp

ATGTTGTCTCCTTCGCTGCCAAGGATGAACATTCTTGGTTTCACGGTGAACTTCTTGATCCGATGCAAAGTCTTACCCAGAAGAAGCAATACGAGTTCTCTCTCCCGAAACATCTCCGTACTCGCCAGTTATGATCAGGAGGAAGTATCACCGGGACGATATAGCAATGAGTTTTCGAATCGTAACTTGGTGCACGAAATTTTACAGCTTTGTGCTAGAAACGGAGCTGTTATGGAAGCAAAAGCTTGCCATGGGAAGATTATTCGTATTGATTTGGAGGGAGATGTTACTCTGTTGAATGTTCTTATTAATGCTTATTCCAAGTGTGGTTTTGTGGAGCTTGCCCGCCAAGTGTTTGATGGAATGCTTGAGAGAAGCTTGGTTTCTTGGAACACCATGATTGGTTTGTATACACGGAATAGAATGGAGTCAGAAGCATTGGATATTTTCTTGGAGATGCGAAACGAAGGGTTTAAGTTTAGTGAATTCACTATATCGAGTGTTCTTTCTGCTTGTGGGGTAAATTGTGATGCCTTGGAATGCAAAAAATTGCATTGTTTGTCAGTGAAGACATGTATTGACTTGAACTTGTATGTTGGTACTGCTTTGCTTGATCTTTACGCAAAATGTGGGATGATCAAGGATGCAGTGCAGGTTTTCGAGTCTATGCAGGACAAGAGTTCAGTTACATGGAGTTCTATGGTGGCAGGTTATGTTCAGAACAAGAATTATGAAGAGGCACTCCTTCTTTACCGTCGAGCTCAGAGAATGAGTTTAGAGCAGAATCAGTTCACATTATCTTCAGTAATTTGCGCTTGTTCAAATCTGGCAGCTTTAATAGAAGGGAAACAGATGCATGCTGTTATATGTAAGTCCGGGTTTGGTTCTAATGTCTTTGTGGCATCCTCTGCAGTAGATATGTATGCTAAATGTGGAAGCTTGAGAGAGTCTTATATTATTTTCTCGGAAGTGCAAGAGAAGAATCTTGAGCTTTGGAACACGATCATCTCGGGGTTTGCAAAGCATGCTCGTCCTAAGGAAGTGATGATCTTGTTTGAGAAAATGCAACAAGATGGAATGCACCCAAATGAGGTTACTTTTAGTTCCTTGTTATCGGTTTGTGGTCACACGGGTTTGGTCGAGGAAGGAAGGAGATTTTTCAAACTCATGAGAACCACTTACGGTCTGTCGCCTAATGTGGTTCATTACTCATGTATGGTTGATATTCTTGGTCGTGCTGGTCTATTGTCTGAAGCGTACGAGTTGATAAAGTCTATTCCTTTCGATCCTACAGCTTCCATTTGGGGTTCTCTTCTAGCTTCTTGTCGAGTCTACAAAAATCTCGAGCTGGCAGAAGTTGCAGCCGAGAAACTATTCGAATTAGAACCAGAAAACGCCGGTAATCACGTCTTACTATCCAATATATACGCGGCAAACAAACAGTGGGAGGAAATCGCCAAGTCAAGGAAGCTTTTAAGGGACTGCGACGTGAAGAAAGTAAGAGGAAAAAGTTGGATTGACATTAAAGACAAGGTCCATACTTTCAGTGTTGGAGAGAGCGGTCATCCGAGAATCCGTGAGATCTGTTCGACGCTAGACAATCTAGTAATCAAATTCAGAAAGTTTGGATATAAACCAAGCGTAGAACACGAGCTGCACGATGTGGAGATAGGAAAGAAAGAGGAGCTTTTGATGCAGCATAGTGAGAAGCTGGCATTGGTTTTTGGGTTAATGTGTTTACCAGAGAGTTCTCCAGTGAGGATTATGAAGAATCTGAGGATTTGTGTGGATTGCCATGAGTTCATGAAGGCTGCATCAATGGCTACAAGAAGATTTATCATTGTTAGAGATGTTAATAGGTTTCACCATTTCAGTGATGGTCATTGTTCTTGTGGCGATTTTTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

635

Amino Acids

71.72

Weight (kDa)

7.92

Isoelectric Point (pI)

44.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	126 - 172	2e-08	PPR repeat family
PPR	PF01535	128 - 158	2.1e-07	PPR repeat
PPR_2	PF13041	227 - 274	4.7e-06	PPR repeat family
PPR_3	PF13812	321 - 376	5.5e-06	Pentatricopeptide repeat domain
PPR_2	PF13041	331 - 374	4.2e-11	PPR repeat family
PPR_1	PF12854	395 - 423	6.1e-06	PPR repeat
E_motif	PF20431	445 - 507	2.4e-18	E motif
DYW_deaminase	PF14432	543 - 635	1.5e-36	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003353)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G04780
fragaria_vesca	FvH4_7g02270
malus_domestica	MD05G1362900.v1.1 MD05G1363000.v1.1 MD10G1340500.v1.1
prunus_persica	Prupe.2G071000_v2.0.a1 Prupe.2G073400_v2.0.a1
pyrus_communis	pycom05g32940 pycom10g29030
rosa_chinensis	RchiOBHm_Chr1g0319571 RchiOBHm_Chr6g0267541 RchiOBHm_Chr7g0197341
rosa_laevigata	RLG00000030470
rosa_multiflora	Rmu_sc0001522.1_g000010 Rmu_sc0002539.1_g000062 Rmu_sc0031493.1_g000001
rosa_roxburghii	Rroxscaffold_4G00284250 Rroxscaffold_4G00328280 Rroxscaffold_7G00200640
rosa_rugosa	Rorug01G0028300 Rorug01G0028400 Rorug01G0028500 Rorug01G0028600 Rorug06G0033600 Rorug06G0033600
rosa_samantha	Rh1AG040400 Rh1BG037600 Rh1CG041600 Rh1DG028300 Rh6AG155100 Rh6BG155700 Rh6CG150900 Rh6DG141000
rosa_wichuraiana	Rw0G012790 Rw1G003340 Rw6G013310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	643, 698
AccBSI	CCGCTC	1 cut(s)	1560
AccI	GTMKAC	2 cut(s)	410, 1332
AccII	CGCG	1 cut(s)	1430
AciI	CCGC	3 cut(s)	346, 1430, 1560
AclWI	GGATC	2 cut(s)	52, 1280
AcsI	RAATTY	3 cut(s)	198, 485, 1613
AcuI	CTGAAG	2 cut(s)	786, 1272
AdeI	CACNNNGTG	1 cut(s)	1663
AfaI	GTAC	3 cut(s)	120, 601, 1259
AfiI	CCNNNNNNNGG	2 cut(s)	1090, 1464
AflIII	ACRYGT	1 cut(s)	572
AgsI	TTSAA	4 cut(s)	298, 586, 822, 1162
AjiI	CACGTC	2 cut(s)	1408, 1489
AjuI	GAANNNNNNNTTGG	4 cut(s)	170, 202, 1700, 1732
Alw21I	GWGCWC	2 cut(s)	195, 763
Alw26I	GTCTC	1 cut(s)	12
Alw44I	GTGCAC	1 cut(s)	191
AlwI	GGATC	2 cut(s)	52, 1280
Ama87I	CYCGRG	2 cut(s)	1009, 1343
ApaLI	GTGCAC	1 cut(s)	191
ApeKI	GCWGC	6 cut(s)	16, 830, 1361, 1654, 1696, 1811
ApoI	RAATTY	3 cut(s)	198, 485, 1613
AseI	ATTAAT	1 cut(s)	309
Asp700I	GAANNNNTTC	2 cut(s)	788, 1373
AspLEI	GCGC	1 cut(s)	815
AspS9I	GGNCC	1 cut(s)	1534
AsuC2I	CCSGG	2 cut(s)	153, 877
AsuHPI	GGTGA	3 cut(s)	58, 141, 1856
AsuII	TTCGAA	2 cut(s)	176, 1377
AvaI	CYCGRG	2 cut(s)	1009, 1343
AvaII	GGWCC	1 cut(s)	1534
AxyI	CCTNAGG	1 cut(s)	1035
BaeGI	GKGCMC	1 cut(s)	195
BanII	GRGCYC	1 cut(s)	763
BarI	GAAGNNNNNNTAC	2 cut(s)	73, 105
BauI	CACGAG	1 cut(s)	1649
BbsI	GAAGAC	1 cut(s)	575
Bbv12I	GWGCWC	2 cut(s)	195, 763
BbvI	GCAGC	6 cut(s)	3, 842, 1373, 1641, 1708, 1798
BccI	CCATC	3 cut(s)	353, 1067, 1871
BclI	TGATCA	2 cut(s)	133, 636
BcnI	CCSGG	2 cut(s)	153, 877
BcoDI	GTCTC	1 cut(s)	12
BfaI	CTAG	4 cut(s)	216, 1316, 1595, 1604
BfmI	CTRYAG	2 cut(s)	909, 1290
BfuAI	ACCTGC	2 cut(s)	643, 698
BglII	AGATCT	1 cut(s)	1581
BisI	GCNGC	7 cut(s)	17, 831, 1362, 1431, 1655, 1697, 1812
BlsI	GCNGC	7 cut(s)	18, 832, 1363, 1432, 1656, 1698, 1813
Bme1390I	CCNGG	2 cut(s)	153, 877
Bme18I	GGWCC	1 cut(s)	1534
BmeT110I	CYCGRG	2 cut(s)	1009, 1343
BmgBI	CACGTC	2 cut(s)	1408, 1489
BmgT120I	GGNCC	1 cut(s)	1534
BmrFI	CCNGG	2 cut(s)	153, 877
BmsI	GCATC	8 cut(s)	53, 447, 520, 634, 843, 911, 1683, 1823
BpiI	GAAGAC	1 cut(s)	575
BpmI	CTGGAG	1 cut(s)	1737
Bpu14I	TTCGAA	2 cut(s)	176, 1377
BpuEI	CTTGAG	3 cut(s)	389, 961, 1007
BpuMI	CCSGG	2 cut(s)	153, 877
BsaJI	CCNNGG	3 cut(s)	20, 250, 534
Bsc4I	CCNNNNNNNGG	2 cut(s)	1090, 1464
Bse118I	RCCGGY	1 cut(s)	1397
Bse1I	ACTGG	2 cut(s)	126, 1754
Bse21I	CCTNAGG	1 cut(s)	1035
Bse3DI	GCAATG	1 cut(s)	172
BseDI	CCNNGG	3 cut(s)	20, 250, 534
BseGI	GGATG	5 cut(s)	30, 639, 649, 902, 1564
BseLI	CCNNNNNNNGG	2 cut(s)	1090, 1464
BseMI	GCAATG	1 cut(s)	172
BseMII	CTCAG	2 cut(s)	776, 1766
BseNI	ACTGG	2 cut(s)	126, 1754
BseRI	GAGGAG	1 cut(s)	1697
BseSI	GKGCMC	1 cut(s)	195
BseXI	GCAGC	6 cut(s)	3, 842, 1373, 1641, 1708, 1798
BsgI	GTGCAG	2 cut(s)	671, 1640
Bsh1236I	CGCG	1 cut(s)	1430
BsiHKAI	GWGCWC	2 cut(s)	195, 763
BsiHKCI	CYCGRG	2 cut(s)	1009, 1343
BsiSI	CCGG	3 cut(s)	152, 876, 1398
BsiWI	CGTACG	1 cut(s)	1257
BslFI	GGGAC	2 cut(s)	168, 1493
BslI	CCNNNNNNNGG	2 cut(s)	1090, 1464
BsmAI	GTCTC	1 cut(s)	12
BsmFI	GGGAC	2 cut(s)	168, 1493
BsmI	GAATGC	3 cut(s)	369, 545, 1083
BsoBI	CYCGRG	2 cut(s)	1009, 1343
Bsp119I	TTCGAA	2 cut(s)	176, 1377
Bsp1286I	GDGCHC	2 cut(s)	195, 763
Bsp143I	GATC	8 cut(s)	57, 133, 613, 636, 1002, 1047, 1285, 1581
Bsp19I	CCATGG	1 cut(s)	250
BspACI	CCGC	3 cut(s)	346, 1430, 1560
BspCNI	CTCAG	2 cut(s)	775, 1767
BspFNI	CGCG	1 cut(s)	1430
BspHI	TCATGA	2 cut(s)	1167, 1803
BspMAI	CTGCAG	1 cut(s)	913
BspMI	ACCTGC	2 cut(s)	643, 698
BspPI	GGATC	2 cut(s)	52, 1280
BspT104I	TTCGAA	2 cut(s)	176, 1377
BsrBI	CCGCTC	1 cut(s)	1560
BsrDI	GCAATG	1 cut(s)	172
BsrFI	RCCGGY	1 cut(s)	1397
BsrI	ACTGG	2 cut(s)	126, 1754
BssAI	RCCGGY	1 cut(s)	1397
BssECI	CCNNGG	3 cut(s)	20, 250, 534
BssMI	GATC	8 cut(s)	57, 133, 613, 636, 1002, 1047, 1285, 1581
BssNAI	GTATAC	1 cut(s)	411
BssSI	CACGAG	1 cut(s)	1649
BssT1I	CCWWGG	3 cut(s)	20, 250, 534
Bst1107I	GTATAC	1 cut(s)	411
Bst2BI	CACGAG	1 cut(s)	1649
Bst4CI	ACNGT	4 cut(s)	46, 755, 1184, 1443
Bst6I	CTCTTC	2 cut(s)	729, 1317
BstAPI	GCANNNNNTGC	3 cut(s)	908, 1025, 1358
BstBI	TTCGAA	2 cut(s)	176, 1377
BstC8I	GCNNGC	7 cut(s)	247, 342, 346, 858, 1026, 1350, 1713
BstDEI	CTNAG	3 cut(s)	762, 1035, 1775
BstDSI	CCRYGG	1 cut(s)	250
BstF5I	GGATG	5 cut(s)	30, 639, 649, 902, 1564
BstFNI	CGCG	1 cut(s)	1430
BstHHI	GCGC	1 cut(s)	815
BstKTI	GATC	8 cut(s)	60, 136, 616, 639, 1005, 1050, 1288, 1584
BstMAI	GTCTC	1 cut(s)	12
BstMBI	GATC	8 cut(s)	57, 133, 613, 636, 1002, 1047, 1285, 1581
BstMWI	GCNNNNNNNGC	5 cut(s)	908, 1025, 1358, 1693, 1820
BstNSI	RCATGY	3 cut(s)	576, 860, 1028
BstSCI	CCNGG	2 cut(s)	151, 875
BstSFI	CTRYAG	2 cut(s)	909, 1290
BstSLI	GKGCMC	1 cut(s)	195
BstUI	CGCG	1 cut(s)	1430
BstV1I	GCAGC	6 cut(s)	3, 842, 1373, 1641, 1708, 1798
BstV2I	GAAGAC	1 cut(s)	575
BstX2I	RGATCY	1 cut(s)	1581
BstYI	RGATCY	1 cut(s)	1581
BstZ17I	GTATAC	1 cut(s)	411
Bsu36I	CCTNAGG	1 cut(s)	1035
BtgI	CCRYGG	1 cut(s)	250
BtrI	CACGTC	2 cut(s)	1408, 1489
BtsCI	GGATG	5 cut(s)	30, 639, 649, 902, 1564
BtsI	GCAGTG	1 cut(s)	654
BtsIMutI	CAGTG	6 cut(s)	570, 654, 1448, 1552, 1761, 1879
BveI	ACCTGC	2 cut(s)	643, 698
Cac8I	GCNNGC	7 cut(s)	247, 342, 346, 858, 1026, 1350, 1713
CciI	TCATGA	2 cut(s)	1167, 1803
CfoI	GCGC	1 cut(s)	815
Cfr10I	RCCGGY	1 cut(s)	1397
Cfr13I	GGNCC	1 cut(s)	1534
CseI	GACGC	1 cut(s)	1600
Csp6I	GTAC	3 cut(s)	119, 600, 1258
CviQI	GTAC	3 cut(s)	119, 600, 1258
DdeI	CTNAG	3 cut(s)	762, 1035, 1775
DpnI	GATC	8 cut(s)	59, 135, 615, 638, 1004, 1049, 1287, 1583
DpnII	GATC	8 cut(s)	57, 133, 613, 636, 1002, 1047, 1285, 1581
DraIII	CACNNNGTG	1 cut(s)	1663
Eam1104I	CTCTTC	2 cut(s)	729, 1317
EarI	CTCTTC	2 cut(s)	729, 1317
Ecl136II	GAGCTC	1 cut(s)	761
Eco130I	CCWWGG	3 cut(s)	20, 250, 534
Eco24I	GRGCYC	1 cut(s)	763
Eco47I	GGWCC	1 cut(s)	1534
Eco53kI	GAGCTC	1 cut(s)	761
Eco57I	CTGAAG	2 cut(s)	786, 1272
Eco81I	CCTNAGG	1 cut(s)	1035
Eco88I	CYCGRG	2 cut(s)	1009, 1343
EcoICRI	GAGCTC	1 cut(s)	761
EcoRI	GAATTC	1 cut(s)	485
EcoT14I	CCWWGG	3 cut(s)	20, 250, 534
EcoT22I	ATGCAT	1 cut(s)	858
EcoT38I	GRGCYC	1 cut(s)	763
ErhI	CCWWGG	3 cut(s)	20, 250, 534
FalI	AAGNNNNNCTT	2 cut(s)	1671, 1703
FaqI	GGGAC	2 cut(s)	168, 1493
FauI	CCCGC	1 cut(s)	353
FbaI	TGATCA	2 cut(s)	133, 636
FblI	GTMKAC	2 cut(s)	410, 1332
Fnu4HI	GCNGC	7 cut(s)	17, 831, 1362, 1431, 1655, 1697, 1812
FokI	GGATG	5 cut(s)	37, 646, 656, 889, 1551
FriOI	GRGCYC	1 cut(s)	763
Fsp4HI	GCNGC	7 cut(s)	17, 831, 1362, 1431, 1655, 1697, 1812
FspBI	CTAG	4 cut(s)	216, 1316, 1595, 1604
GlaI	GCGC	1 cut(s)	814
GluI	GCNGC	7 cut(s)	17, 831, 1362, 1431, 1655, 1697, 1812
GsuI	CTGGAG	1 cut(s)	1737
HapII	CCGG	3 cut(s)	152, 876, 1398
HgaI	GACGC	1 cut(s)	1600
HhaI	GCGC	1 cut(s)	815
Hin6I	GCGC	1 cut(s)	813
HinP1I	GCGC	1 cut(s)	813
HindIII	AAGCTT	4 cut(s)	243, 376, 937, 1469
HinfI	GANTC	9 cut(s)	178, 428, 662, 784, 947, 982, 1329, 1572, 1771
HpaII	CCGG	3 cut(s)	152, 876, 1398
HphI	GGTGA	3 cut(s)	58, 141, 1856
Hpy166II	GTNNAC	6 cut(s)	49, 193, 411, 792, 1333, 1739
Hpy188I	TCNGA	9 cut(s)	62, 433, 720, 765, 967, 1252, 1569, 1619, 1776
Hpy188III	TCNNGA	7 cut(s)	55, 105, 137, 986, 1168, 1343, 1804
Hpy8I	GTNNAC	6 cut(s)	49, 193, 411, 792, 1333, 1739
Hpy99I	CGWCG	3 cut(s)	759, 1490, 1594
HpyAV	CCTTC	7 cut(s)	21, 461, 755, 836, 1139, 1143, 1801
HpyCH4III	ACNGT	4 cut(s)	46, 755, 1184, 1443
HpyCH4IV	ACGT	2 cut(s)	1407, 1488
HpyF10VI	GCNNNNNNNGC	5 cut(s)	908, 1025, 1358, 1693, 1820
HpyF3I	CTNAG	3 cut(s)	762, 1035, 1775
HpySE526I	ACGT	2 cut(s)	1407, 1488
HspAI	GCGC	1 cut(s)	813
Ksp22I	TGATCA	2 cut(s)	133, 636
Kzo9I	GATC	8 cut(s)	57, 133, 613, 636, 1002, 1047, 1285, 1581
LmnI	GCTCC	3 cut(s)	224, 337, 1684
Lsp1109I	GCAGC	6 cut(s)	3, 842, 1373, 1641, 1708, 1798
LweI	GCATC	8 cut(s)	53, 447, 520, 634, 843, 911, 1683, 1823
MaeI	CTAG	4 cut(s)	216, 1316, 1595, 1604
MaeII	ACGT	2 cut(s)	1407, 1488
MaeIII	GTNAC	5 cut(s)	182, 286, 685, 1093, 1124
MalI	GATC	8 cut(s)	59, 135, 615, 638, 1004, 1049, 1287, 1583
MbiI	CCGCTC	1 cut(s)	1560
MboI	GATC	8 cut(s)	57, 133, 613, 636, 1002, 1047, 1285, 1581
MflI	RGATCY	1 cut(s)	1581
MhlI	GDGCHC	2 cut(s)	195, 763
MluCI	AATT	8 cut(s)	198, 485, 523, 548, 727, 807, 1379, 1613
MlyI	GAGTC	4 cut(s)	437, 671, 956, 1338
MmeI	TCCRAC	2 cut(s)	1493, 1531
Mph1103I	ATGCAT	1 cut(s)	858
MroXI	GAANNNNTTC	2 cut(s)	788, 1373
MseI	TTAA	7 cut(s)	309, 474, 836, 1475, 1524, 1730, 1854
MslI	CAYNNNNRTG	2 cut(s)	1086, 1872
MspI	CCGG	3 cut(s)	152, 876, 1398
MspR9I	CCNGG	2 cut(s)	153, 877
Mva1269I	GAATGC	3 cut(s)	369, 545, 1083
MvnI	CGCG	1 cut(s)	1430
MwoI	GCNNNNNNNGC	5 cut(s)	908, 1025, 1358, 1693, 1820
NciI	CCSGG	2 cut(s)	153, 877
NcoI	CCATGG	1 cut(s)	250
NdeII	GATC	8 cut(s)	57, 133, 613, 636, 1002, 1047, 1285, 1581
NmeAIII	GCCGAG	1 cut(s)	1390
NmuCI	GTSAC	1 cut(s)	1124
NsiI	ATGCAT	1 cut(s)	858
NspI	RCATGY	3 cut(s)	576, 860, 1028
NspV	TTCGAA	2 cut(s)	176, 1377
PaeI	GCATGC	2 cut(s)	860, 1028
PaeR7I	CTCGAG	1 cut(s)	1343
PagI	TCATGA	2 cut(s)	1167, 1803
PciI	ACATGT	1 cut(s)	572
PcsI	WCGNNNNNNNCGW	1 cut(s)	1656
PctI	GAATGC	3 cut(s)	369, 545, 1083
PdmI	GAANNNNTTC	2 cut(s)	788, 1373
PfeI	GAWTC	5 cut(s)	178, 784, 982, 1572, 1771
Pfl23II	CGTACG	1 cut(s)	1257
PflFI	GACNNNGTC	1 cut(s)	1532
PkrI	GCNGC	7 cut(s)	18, 832, 1363, 1432, 1656, 1698, 1813
PleI	GAGTC	4 cut(s)	436, 670, 955, 1337
PpsI	GAGTC	4 cut(s)	436, 670, 955, 1337
PscI	ACATGT	1 cut(s)	572
PshBI	ATTAAT	1 cut(s)	309
Psp124BI	GAGCTC	1 cut(s)	763
PspLI	CGTACG	1 cut(s)	1257
PspPI	GGNCC	1 cut(s)	1534
PstI	CTGCAG	1 cut(s)	913
PsuI	RGATCY	1 cut(s)	1581
PsyI	GACNNNGTC	1 cut(s)	1532
RsaI	GTAC	3 cut(s)	120, 601, 1259
RsaNI	GTAC	3 cut(s)	119, 600, 1258
RseI	CAYNNNNRTG	2 cut(s)	1086, 1872
SacI	GAGCTC	1 cut(s)	763
SaqAI	TTAA	7 cut(s)	309, 474, 836, 1475, 1524, 1730, 1854
SatI	GCNGC	7 cut(s)	17, 831, 1362, 1431, 1655, 1697, 1812
Sau3AI	GATC	8 cut(s)	57, 133, 613, 636, 1002, 1047, 1285, 1581
Sau96I	GGNCC	1 cut(s)	1534
SchI	GAGTC	4 cut(s)	437, 671, 956, 1338
ScrFI	CCNGG	2 cut(s)	153, 877
SduI	GDGCHC	2 cut(s)	195, 763
SfaNI	GCATC	8 cut(s)	53, 447, 520, 634, 843, 911, 1683, 1823
SfcI	CTRYAG	2 cut(s)	909, 1290
Sfr274I	CTCGAG	1 cut(s)	1343
SfuI	TTCGAA	2 cut(s)	176, 1377
SinI	GGWCC	1 cut(s)	1534
SlaI	CTCGAG	1 cut(s)	1343
SmiMI	CAYNNNNRTG	2 cut(s)	1086, 1872
SmlI	CTYRAG	4 cut(s)	368, 940, 986, 1343
SmoI	CTYRAG	4 cut(s)	368, 940, 986, 1343
SphI	GCATGC	2 cut(s)	860, 1028
Sse9I	AATT	8 cut(s)	198, 485, 523, 548, 727, 807, 1379, 1613
SsiI	CCGC	3 cut(s)	346, 1430, 1560
SspMI	CTAG	4 cut(s)	216, 1316, 1595, 1604
SstI	GAGCTC	1 cut(s)	763
StyD4I	CCNGG	2 cut(s)	151, 875
StyI	CCWWGG	3 cut(s)	20, 250, 534
TaaI	ACNGT	4 cut(s)	46, 755, 1184, 1443
TaiI	ACGT	2 cut(s)	1410, 1491
TasI	AATT	8 cut(s)	198, 485, 523, 548, 727, 807, 1379, 1613
TauI	GCSGC	1 cut(s)	1433
TfiI	GAWTC	5 cut(s)	178, 784, 982, 1572, 1771
Tru1I	TTAA	7 cut(s)	309, 474, 836, 1475, 1524, 1730, 1854
Tru9I	TTAA	7 cut(s)	309, 474, 836, 1475, 1524, 1730, 1854
TscAI	CASTG	6 cut(s)	570, 654, 1448, 1552, 1761, 1879
TseFI	GTSAC	1 cut(s)	1124
TseI	GCWGC	6 cut(s)	16, 830, 1361, 1654, 1696, 1811
Tsp45I	GTSAC	1 cut(s)	1124
TspDTI	ATGAA	6 cut(s)	41, 747, 1193, 1781, 1792, 1820
TspGWI	ACGGA	4 cut(s)	106, 237, 430, 1565
TspRI	CASTG	6 cut(s)	570, 654, 1448, 1552, 1761, 1879
Tth111I	GACNNNGTC	1 cut(s)	1532
VneI	GTGCAC	1 cut(s)	191
VpaK11BI	GGWCC	1 cut(s)	1534
VspI	ATTAAT	1 cut(s)	309
XapI	RAATTY	3 cut(s)	198, 485, 1613
XceI	RCATGY	3 cut(s)	576, 860, 1028
XcmI	CCANNNNNNNNNTGG	2 cut(s)	356, 1874
XhoI	CTCGAG	1 cut(s)	1343
XmiI	GTMKAC	2 cut(s)	410, 1332
XmnI	GAANNNNTTC	2 cut(s)	788, 1373
XspI	CTAG	4 cut(s)	216, 1316, 1595, 1604
Zsp2I	ATGCAT	1 cut(s)	858

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.