Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0003353

Physical Location & Seq

Genomic Coordinates Forward (+)

29459647 .. 29462137

Gene Structure 2491 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom10g29030.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2184 bp

ATGGGAGGAGAAAAATGCGTGTCTATAATTTCCCTCCTTAATAGAGTAGCAATGTTTCATGTGATAGAATGGACCTTTGACCTTTATGTTCCCCGTGCATTGCGCACTTCGTTTCGAAAGCTTTTGACCGACCGTGACCATGACCTTGTTGGAAGCGTTGTTATGATATCGATGAGAACCTTGAGGAGGAGAAACTTGGAGGGAATCTATTGCCCTGTTCGAAACTATTACAGACATTTGTCAGCCATCGCCAATGGACCCCAACAGTCCCCTGTAACTGTTGGGTCGGAGGCGGCGAGGGATGCGTACCCTCCACTTGTTCATGAAATCCTGCAAATTTGTGCAGGAACAGGTGCACCCGCGGAAGGGAAGGCCTGCCATGCACACATCATACGTTTCGGATTAACAGCAGACACATTAACCTCTAATATGCTCATCAACATGTACTCCAAATGTGGTTTACTTGATTGTGCCGGCAAGGTATTCGATGAAATGCCTGAAAGGAGCTTAGTTTCATGGAATACAATGATTGGGTCACTTGCTCGGAATGGGGAAGAACAAGAAGCTCTTGGTCTTTTCTTGCAGATGCAAAGACAAGGAAACACTTTCAGTGAATTCACCGTTTCAAGTGTTCTTTGTGCTTGTGCTGCGAAATGCGCTGTGTTTGAGAGTAAACAACTGCATGCTCTTGCTGTTAAGTTAGCAATGAATATAAATGTCTATGTGGGAACCGCGTTGCTTGATGTTTATGCAAAGTCTGGTTTGATAAAGGATGCAAGCTCTGTTTTTGAGTCTTTGCCAGAGAGGAGTGATGTTACATGGAGTTCGATGGTTGCCGGGTATGTGCAAAATGAGGTTTTTGAAGAGGCTTTGGTGTTGTTCCATAGAGCTAAAAGGATAGGGTTAGAACAGAACCAGTTTACAGTTTCTTCTGCTATTTGTGCTTGTGCAGGTCTGGCAGCTCTCATTGAAGGAAAGCAGGTGCATGCTCTTTTATCTAAAATTGGCTTTGGTTTGAATATATTTATTGTTTCCTCTCTTATAGACATGTATGCAAAATGTGGTAGCATTAGAGAAGCATACAGTGTGTTTCAAGGTATGAGCGAGAGGAACATTGTTTTATGGAATGCCATGATTTCAGGGTTCGCTAGACATGCTTGCTCCCTAGAGGTGATGATCTTATTTGAGAAAATGCAGCAGATGGGTATGTTCCCGAGCGAAGTAACCTATGTTTCGGTATTAACTGCCTGTAGTCATATGGGACTAGTTGAAAGTGGAAAGAAATATTTCAACCTCATGATAGCAGAGCACAATGTGTCACCAAATGTTGTTCACTATTCATGCATGGTTGATATTTTAGGTCGGTCAGGGTTGATTATTGAAGCCTATGACTTGATACAGAAAATTCCGTTTGGTGTTACTGCTTCTATGTGGGGTTCTTTGTTGGCTTCTTGTAGGATCCATGGAAATCTTGACTTGGCCGAGGTCGCAGCACAGCATTTGTCTGAGATAGAACCTAATAATGCAGGAAACCATATTTTGCTGTCAAATGTTTATGCAGCAAATAAGAAGTGGGAGGAAGTTGCGAGAACAAGGAAGATTCTTAAAGAAAGCGAGTTGAAGAAAGAGAGAGGGAAGAGTTGGATTGAAATAAAGGACAAAGTTCACTCATTTATGGTTGGAGAGAGGAAACATGCTAGAATTGATGAGATATATTCAAAATTGGACGATTTGGTGACAGAATTGAAGATAATGGGGTACAAGGTTGAGACTGAACATGACCTTCATTGCGTGGGTGAAAGCAGAAAGCATGAACTTTTGAGGCACCACAGTGAGAAACTTGCTCTTACTTTTGGGAAGAATCTTAGGATTTGTGGTGATTGCCATGCTTTTATGAAGATTAGTTCAAGTTGTAGGGGAAGGGAAATCATCGTTAGGGATACAAACAGTCTGGTGAAATACTTTTTTGTGTTCGGTTGCGTTTCGAGGGTCCAGTCCAGTTTACCAGCAATGGGATGGGAGCGCAAGAGATTCATCCAATGGCTGCTGATTGGGGATGTGCTCTCCGCTTGCAGAGGGTCTGACGTAGTGCCTAAGGCCAGTTGTTTTGTGATTATACATGAACATATGCGAGTGCAAACAAGCGTAGGCGGTGCGGTGTATCCAACTGAAGGTGTTGCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

728

Amino Acids

80.85

Weight (kDa)

8.22

Isoelectric Point (pI)

46.99

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003353)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G04780
fragaria_vesca	FvH4_7g02270
malus_domestica	MD05G1362900.v1.1 MD05G1363000.v1.1 MD10G1340500.v1.1
prunus_persica	Prupe.2G071000_v2.0.a1 Prupe.2G073400_v2.0.a1
pyrus_communis	pycom05g32940 pycom10g29030
rosa_chinensis	RchiOBHm_Chr1g0319571 RchiOBHm_Chr6g0267541 RchiOBHm_Chr7g0197341
rosa_laevigata	RLG00000030470
rosa_multiflora	Rmu_sc0001522.1_g000010 Rmu_sc0002539.1_g000062 Rmu_sc0031493.1_g000001
rosa_roxburghii	Rroxscaffold_4G00284250 Rroxscaffold_4G00328280 Rroxscaffold_7G00200640
rosa_rugosa	Rorug01G0028300 Rorug01G0028400 Rorug01G0028500 Rorug01G0028600 Rorug06G0033600 Rorug06G0033600
rosa_samantha	Rh1AG040400 Rh1BG037600 Rh1CG041600 Rh1DG028300 Rh6AG155100 Rh6BG155700 Rh6CG150900 Rh6DG141000
rosa_wichuraiana	Rw0G012790 Rw1G003340 Rw6G013310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	970
Acc16I	TGCGCA	1 cut(s)	104
Acc36I	ACCTGC	2 cut(s)	941, 970
AccB1I	GGYRCC	1 cut(s)	1824
AccII	CGCG	2 cut(s)	362, 734
AciI	CCGC	7 cut(s)	293, 360, 362, 732, 2067, 2151, 2156
AclWI	GGATC	2 cut(s)	1453, 1466
AcoI	YGGCCR	1 cut(s)	1479
AcsI	RAATTY	3 cut(s)	336, 614, 1404
AdeI	CACNNNGTG	1 cut(s)	1315
AfaI	GTAC	3 cut(s)	308, 446, 1760
AfiI	CCNNNNNNNGG	5 cut(s)	186, 365, 366, 2012, 2171
AflIII	ACRYGT	2 cut(s)	441, 1047
AhlI	ACTAGT	1 cut(s)	1264
AleI	CACNNNNGTG	1 cut(s)	1830
AluBI	AGCT	6 cut(s)	121, 507, 566, 780, 890, 962
AluI	AGCT	6 cut(s)	121, 507, 566, 780, 890, 962
Alw21I	GWGCWC	3 cut(s)	358, 1311, 2064
Alw26I	GTCTC	1 cut(s)	1763
Alw44I	GTGCAC	1 cut(s)	354
AlwI	GGATC	2 cut(s)	1453, 1466
Ama87I	CYCGRG	1 cut(s)	1213
AoxI	GGCC	3 cut(s)	372, 1479, 2097
ApaLI	GTGCAC	1 cut(s)	354
ApeKI	GCWGC	6 cut(s)	647, 959, 1195, 1490, 1559, 2044
ApoI	RAATTY	3 cut(s)	336, 614, 1404
Asp700I	GAANNNNTTC	1 cut(s)	1286
AspLEI	GCGC	3 cut(s)	105, 659, 2025
AspS9I	GGNCC	3 cut(s)	72, 257, 1990
AsuC2I	CCSGG	1 cut(s)	838
AsuHPI	GGTGA	7 cut(s)	610, 1183, 1311, 1747, 1808, 1889, 1966
AsuII	TTCGAA	2 cut(s)	115, 220
AvaI	CYCGRG	1 cut(s)	1213
AvaII	GGWCC	3 cut(s)	72, 257, 1990
AxyI	CCTNAGG	1 cut(s)	2094
BaeGI	GKGCMC	1 cut(s)	358
BamHI	GGATCC	1 cut(s)	1458
BanI	GGYRCC	1 cut(s)	1824
Bbv12I	GWGCWC	3 cut(s)	358, 1311, 2064
BbvI	GCAGC	6 cut(s)	634, 971, 1207, 1502, 1571, 2031
BccI	CCATC	4 cut(s)	254, 823, 1195, 2010
BcgI	CGANNNNNNTGC	2 cut(s)	466, 500
BciVI	GTATCC	2 cut(s)	1933, 2172
BcnI	CCSGG	1 cut(s)	838
BcoDI	GTCTC	1 cut(s)	1763
BcuI	ACTAGT	1 cut(s)	1264
BfaI	CTAG	4 cut(s)	1149, 1166, 1265, 1698
BfmI	CTRYAG	1 cut(s)	1249
BfuAI	ACCTGC	2 cut(s)	941, 970
BfuI	GTATCC	2 cut(s)	1933, 2172
BisI	GCNGC	7 cut(s)	294, 648, 960, 1196, 1491, 1560, 2045
BlsI	GCNGC	7 cut(s)	295, 649, 961, 1197, 1492, 1561, 2046
Bme1390I	CCNGG	1 cut(s)	838
Bme18I	GGWCC	3 cut(s)	72, 257, 1990
BmeT110I	CYCGRG	1 cut(s)	1213
BmgT120I	GGNCC	3 cut(s)	72, 257, 1990
BmiI	GGNNCC	5 cut(s)	259, 730, 1460, 1826, 1991
BmrFI	CCNGG	1 cut(s)	838
BmsI	GCATC	3 cut(s)	292, 576, 763
BoxI	GACNNNNGTC	1 cut(s)	238
Bpu14I	TTCGAA	2 cut(s)	115, 220
BpuEI	CTTGAG	1 cut(s)	202
BpuMI	CCSGG	1 cut(s)	838
Bsa29I	ATCGAT	1 cut(s)	170
BsaJI	CCNNGG	3 cut(s)	360, 1462, 1482
BsaXI	ACNNNNNCTCC	2 cut(s)	431, 461
Bsc4I	CCNNNNNNNGG	5 cut(s)	186, 365, 366, 2012, 2171
Bse118I	RCCGGY	1 cut(s)	473
Bse1I	ACTGG	4 cut(s)	916, 1993, 1998, 2100
Bse21I	CCTNAGG	1 cut(s)	2094
Bse3DI	GCAATG	5 cut(s)	57, 98, 711, 1786, 2016
BseCI	ATCGAT	1 cut(s)	170
BseDI	CCNNGG	3 cut(s)	360, 1462, 1482
BseGI	GGATG	5 cut(s)	307, 778, 2021, 2034, 2062
BseLI	CCNNNNNNNGG	5 cut(s)	186, 365, 366, 2012, 2171
BseMI	GCAATG	5 cut(s)	57, 98, 711, 1786, 2016
BseMII	CTCAG	1 cut(s)	1497
BseNI	ACTGG	4 cut(s)	916, 1993, 1998, 2100
BseRI	GAGGAG	4 cut(s)	21, 199, 202, 820
BseSI	GKGCMC	1 cut(s)	358
BseXI	GCAGC	6 cut(s)	634, 971, 1207, 1502, 1571, 2031
BsgI	GTGCAG	2 cut(s)	363, 969
Bsh1236I	CGCG	2 cut(s)	362, 734
Bsh1285I	CGRYCG	1 cut(s)	133
BshFI	GGCC	3 cut(s)	374, 1481, 2099
BshNI	GGYRCC	1 cut(s)	1824
BshVI	ATCGAT	1 cut(s)	170
BsiEI	CGRYCG	1 cut(s)	133
BsiHKAI	GWGCWC	3 cut(s)	358, 1311, 2064
BsiHKCI	CYCGRG	1 cut(s)	1213
BsiSI	CCGG	2 cut(s)	474, 837
BslFI	GGGAC	2 cut(s)	253, 1275
BslI	CCNNNNNNNGG	5 cut(s)	186, 365, 366, 2012, 2171
BsmAI	GTCTC	1 cut(s)	1763
BsmFI	GGGAC	2 cut(s)	253, 1275
BsmI	GAATGC	1 cut(s)	1132
BsnI	GGCC	3 cut(s)	374, 1481, 2099
BsoBI	CYCGRG	1 cut(s)	1213
Bsp119I	TTCGAA	2 cut(s)	115, 220
Bsp1286I	GDGCHC	3 cut(s)	358, 1311, 2064
Bsp143I	GATC	2 cut(s)	1176, 1458
Bsp19I	CCATGG	1 cut(s)	1462
BspACI	CCGC	7 cut(s)	293, 360, 362, 732, 2067, 2151, 2156
BspANI	GGCC	3 cut(s)	374, 1481, 2099
BspCNI	CTCAG	1 cut(s)	1498
BspDI	ATCGAT	1 cut(s)	170
BspFNI	CGCG	2 cut(s)	362, 734
BspHI	TCATGA	2 cut(s)	322, 1296
BspLI	GGNNCC	5 cut(s)	259, 730, 1460, 1826, 1991
BspMI	ACCTGC	2 cut(s)	941, 970
BspPI	GGATC	2 cut(s)	1453, 1466
BspT104I	TTCGAA	2 cut(s)	115, 220
BspT107I	GGYRCC	1 cut(s)	1824
BsrDI	GCAATG	5 cut(s)	57, 98, 711, 1786, 2016
BsrFI	RCCGGY	1 cut(s)	473
BsrI	ACTGG	4 cut(s)	916, 1993, 1998, 2100
BssAI	RCCGGY	1 cut(s)	473
BssECI	CCNNGG	3 cut(s)	360, 1462, 1482
BssMI	GATC	2 cut(s)	1176, 1458
BssT1I	CCWWGG	1 cut(s)	1462
Bst4CI	ACNGT	8 cut(s)	134, 267, 280, 622, 925, 1085, 1832, 1949
Bst6I	CTCTTC	2 cut(s)	858, 1631
BstBI	TTCGAA	2 cut(s)	115, 220
BstC8I	GCNNGC	7 cut(s)	376, 475, 684, 778, 987, 1159, 2071
BstDEI	CTNAG	4 cut(s)	508, 1506, 1865, 2094
BstDSI	CCRYGG	2 cut(s)	360, 1462
BstENI	CCTNNNNNAGG	1 cut(s)	184
BstF5I	GGATG	5 cut(s)	307, 778, 2021, 2034, 2062
BstFNI	CGCG	2 cut(s)	362, 734
BstHHI	GCGC	3 cut(s)	105, 659, 2025
BstKTI	GATC	2 cut(s)	1179, 1461
BstMAI	GTCTC	1 cut(s)	1763
BstMBI	GATC	2 cut(s)	1176, 1458
BstMCI	CGRYCG	1 cut(s)	133
BstMWI	GCNNNNNNNGC	8 cut(s)	302, 380, 647, 656, 941, 956, 1154, 1487
BstNSI	RCATGY	6 cut(s)	445, 686, 989, 1051, 1157, 1697
BstPAI	GACNNNNGTC	1 cut(s)	238
BstSCI	CCNGG	1 cut(s)	836
BstSFI	CTRYAG	1 cut(s)	1249
BstSLI	GKGCMC	1 cut(s)	358
BstUI	CGCG	2 cut(s)	362, 734
BstV1I	GCAGC	6 cut(s)	634, 971, 1207, 1502, 1571, 2031
BstX2I	RGATCY	1 cut(s)	1458
BstYI	RGATCY	1 cut(s)	1458
Bsu15I	ATCGAT	1 cut(s)	170
Bsu36I	CCTNAGG	1 cut(s)	2094
BsuI	GTATCC	2 cut(s)	1933, 2172
BsuRI	GGCC	3 cut(s)	374, 1481, 2099
BsuTUI	ATCGAT	1 cut(s)	170
BtgI	CCRYGG	2 cut(s)	360, 1462
BtgZI	GCGATG	1 cut(s)	232
BtsCI	GGATG	5 cut(s)	307, 778, 2021, 2034, 2062
BtsIMutI	CAGTG	3 cut(s)	616, 1090, 1837
BveI	ACCTGC	2 cut(s)	941, 970
Cac8I	GCNNGC	7 cut(s)	376, 475, 684, 778, 987, 1159, 2071
CciI	TCATGA	2 cut(s)	322, 1296
CfoI	GCGC	3 cut(s)	105, 659, 2025
Cfr10I	RCCGGY	1 cut(s)	473
Cfr13I	GGNCC	3 cut(s)	72, 257, 1990
Cfr42I	CCGCGG	1 cut(s)	363
ClaI	ATCGAT	1 cut(s)	170
Csp6I	GTAC	3 cut(s)	307, 445, 1759
CviQI	GTAC	3 cut(s)	307, 445, 1759
DdeI	CTNAG	4 cut(s)	508, 1506, 1865, 2094
DpnI	GATC	2 cut(s)	1178, 1460
DpnII	GATC	2 cut(s)	1176, 1458
DraIII	CACNNNGTG	1 cut(s)	1315
EaeI	YGGCCR	1 cut(s)	1479
Eam1104I	CTCTTC	2 cut(s)	858, 1631
EarI	CTCTTC	2 cut(s)	858, 1631
Eco130I	CCWWGG	1 cut(s)	1462
Eco147I	AGGCCT	1 cut(s)	374
Eco32I	GATATC	1 cut(s)	168
Eco47I	GGWCC	3 cut(s)	72, 257, 1990
Eco81I	CCTNAGG	1 cut(s)	2094
Eco88I	CYCGRG	1 cut(s)	1213
EcoNI	CCTNNNNNAGG	1 cut(s)	184
EcoRI	GAATTC	1 cut(s)	614
EcoRV	GATATC	1 cut(s)	168
EcoT14I	CCWWGG	1 cut(s)	1462
EcoT22I	ATGCAT	1 cut(s)	1346
ErhI	CCWWGG	1 cut(s)	1462
FalI	AAGNNNNNCTT	2 cut(s)	552, 584
FaqI	GGGAC	2 cut(s)	253, 1275
FauI	CCCGC	1 cut(s)	367
FauNDI	CATATG	2 cut(s)	1257, 2127
Fnu4HI	GCNGC	7 cut(s)	294, 648, 960, 1196, 1491, 1560, 2045
FokI	GGATG	5 cut(s)	314, 785, 2021, 2028, 2069
Fsp4HI	GCNGC	7 cut(s)	294, 648, 960, 1196, 1491, 1560, 2045
FspBI	CTAG	4 cut(s)	1149, 1166, 1265, 1698
FspI	TGCGCA	1 cut(s)	104
GlaI	GCGC	3 cut(s)	104, 658, 2024
GluI	GCNGC	7 cut(s)	294, 648, 960, 1196, 1491, 1560, 2045
HaeIII	GGCC	3 cut(s)	374, 1481, 2099
HapII	CCGG	2 cut(s)	474, 837
HhaI	GCGC	3 cut(s)	105, 659, 2025
Hin6I	GCGC	3 cut(s)	103, 657, 2023
HinP1I	GCGC	3 cut(s)	103, 657, 2023
HindIII	AAGCTT	1 cut(s)	119
HinfI	GANTC	5 cut(s)	204, 791, 1600, 1861, 2031
HpaII	CCGG	2 cut(s)	474, 837
HphI	GGTGA	7 cut(s)	610, 1183, 1311, 1747, 1808, 1889, 1966
Hpy166II	GTNNAC	7 cut(s)	356, 461, 674, 921, 1333, 1666, 2003
Hpy188I	TCNGA	5 cut(s)	289, 401, 546, 1507, 2083
Hpy188III	TCNNGA	4 cut(s)	323, 1213, 1297, 1472
Hpy8I	GTNNAC	7 cut(s)	356, 461, 674, 921, 1333, 1666, 2003
HpyAV	CCTTC	6 cut(s)	359, 364, 965, 1793, 1914, 2165
HpyCH4III	ACNGT	8 cut(s)	134, 267, 280, 622, 925, 1085, 1832, 1949
HpyCH4IV	ACGT	2 cut(s)	394, 2085
HpyF10VI	GCNNNNNNNGC	8 cut(s)	302, 380, 647, 656, 941, 956, 1154, 1487
HpyF3I	CTNAG	4 cut(s)	508, 1506, 1865, 2094
HpySE526I	ACGT	2 cut(s)	394, 2085
HspAI	GCGC	3 cut(s)	103, 657, 2023
KroI	GCCGGC	1 cut(s)	473
KroNI	GCCGGC	1 cut(s)	475
KspI	CCGCGG	1 cut(s)	363
Kzo9I	GATC	2 cut(s)	1176, 1458
LmnI	GCTCC	3 cut(s)	504, 1166, 2020
Lsp1109I	GCAGC	6 cut(s)	634, 971, 1207, 1502, 1571, 2031
LweI	GCATC	3 cut(s)	292, 576, 763
MaeI	CTAG	4 cut(s)	1149, 1166, 1265, 1698
MaeII	ACGT	2 cut(s)	394, 2085
MaeIII	GTNAC	8 cut(s)	134, 274, 534, 814, 1222, 1317, 1417, 1735
MalI	GATC	2 cut(s)	1178, 1460
MboI	GATC	2 cut(s)	1176, 1458
MboII	GAAGA	9 cut(s)	566, 875, 921, 1609, 1633, 1648, 1759, 1870, 1909
MflI	RGATCY	1 cut(s)	1458
MhlI	GDGCHC	3 cut(s)	358, 1311, 2064
MluCI	AATT	8 cut(s)	27, 336, 614, 1002, 1404, 1701, 1721, 1742
MlyI	GAGTC	1 cut(s)	800
MmeI	TCCRAC	4 cut(s)	130, 267, 1622, 1660
Mph1103I	ATGCAT	1 cut(s)	1346
MroNI	GCCGGC	1 cut(s)	473
MroXI	GAANNNNTTC	1 cut(s)	1286
MseI	TTAA	6 cut(s)	39, 404, 419, 696, 1241, 1605
MslI	CAYNNNNRTG	2 cut(s)	440, 1830
MspA1I	CMGCKG	1 cut(s)	362
MspI	CCGG	2 cut(s)	474, 837
MspR9I	CCNGG	1 cut(s)	838
Mva1269I	GAATGC	1 cut(s)	1132
MvnI	CGCG	2 cut(s)	362, 734
MwoI	GCNNNNNNNGC	8 cut(s)	302, 380, 647, 656, 941, 956, 1154, 1487
NaeI	GCCGGC	1 cut(s)	475
NciI	CCSGG	1 cut(s)	838
NcoI	CCATGG	1 cut(s)	1462
NdeI	CATATG	2 cut(s)	1257, 2127
NdeII	GATC	2 cut(s)	1176, 1458
NgoMIV	GCCGGC	1 cut(s)	473
NlaIV	GGNNCC	5 cut(s)	259, 730, 1460, 1826, 1991
NmeAIII	GCCGAG	1 cut(s)	1507
NmuCI	GTSAC	4 cut(s)	134, 534, 1317, 1735
NsbI	TGCGCA	1 cut(s)	104
NsiI	ATGCAT	1 cut(s)	1346
NspI	RCATGY	6 cut(s)	445, 686, 989, 1051, 1157, 1697
NspV	TTCGAA	2 cut(s)	115, 220
OliI	CACNNNNGTG	1 cut(s)	1830
PaeI	GCATGC	2 cut(s)	686, 989
PagI	TCATGA	2 cut(s)	322, 1296
PaqCI	CACCTGC	1 cut(s)	970
PceI	AGGCCT	1 cut(s)	374
PciI	ACATGT	2 cut(s)	441, 1047
PcsI	WCGNNNNNNNCGW	1 cut(s)	293
PctI	GAATGC	1 cut(s)	1132
PdiI	GCCGGC	1 cut(s)	475
PdmI	GAANNNNTTC	1 cut(s)	1286
PfeI	GAWTC	4 cut(s)	204, 1600, 1861, 2031
PkrI	GCNGC	7 cut(s)	295, 649, 961, 1197, 1492, 1561, 2046
PleI	GAGTC	1 cut(s)	799
PpsI	GAGTC	1 cut(s)	799
PscI	ACATGT	2 cut(s)	441, 1047
PshAI	GACNNNNGTC	1 cut(s)	238
PspN4I	GGNNCC	5 cut(s)	259, 730, 1460, 1826, 1991
PspPI	GGNCC	3 cut(s)	72, 257, 1990
PsuI	RGATCY	1 cut(s)	1458
RsaI	GTAC	3 cut(s)	308, 446, 1760
RsaNI	GTAC	3 cut(s)	307, 445, 1759
RseI	CAYNNNNRTG	2 cut(s)	440, 1830
SacII	CCGCGG	1 cut(s)	363
SaqAI	TTAA	6 cut(s)	39, 404, 419, 696, 1241, 1605
SatI	GCNGC	7 cut(s)	294, 648, 960, 1196, 1491, 1560, 2045
Sau3AI	GATC	2 cut(s)	1176, 1458
Sau96I	GGNCC	3 cut(s)	72, 257, 1990
SchI	GAGTC	1 cut(s)	800
ScrFI	CCNGG	1 cut(s)	838
SduI	GDGCHC	3 cut(s)	358, 1311, 2064
SfaNI	GCATC	3 cut(s)	292, 576, 763
SfcI	CTRYAG	1 cut(s)	1249
Sfr303I	CCGCGG	1 cut(s)	363
SfuI	TTCGAA	2 cut(s)	115, 220
SgrBI	CCGCGG	1 cut(s)	363
SinI	GGWCC	3 cut(s)	72, 257, 1990
SmiMI	CAYNNNNRTG	2 cut(s)	440, 1830
SmlI	CTYRAG	1 cut(s)	181
SmoI	CTYRAG	1 cut(s)	181
SpeI	ACTAGT	1 cut(s)	1264
SphI	GCATGC	2 cut(s)	686, 989
Sse9I	AATT	8 cut(s)	27, 336, 614, 1002, 1404, 1701, 1721, 1742
SseBI	AGGCCT	1 cut(s)	374
SsiI	CCGC	7 cut(s)	293, 360, 362, 732, 2067, 2151, 2156
SspI	AATATT	1 cut(s)	1286
SspMI	CTAG	4 cut(s)	1149, 1166, 1265, 1698
StuI	AGGCCT	1 cut(s)	374
StyD4I	CCNGG	1 cut(s)	836
StyI	CCWWGG	1 cut(s)	1462
TaaI	ACNGT	8 cut(s)	134, 267, 280, 622, 925, 1085, 1832, 1949
TaiI	ACGT	2 cut(s)	397, 2088
TaqI	TCGA	6 cut(s)	115, 170, 220, 486, 827, 1985
TaqII	GACCGA	2 cut(s)	143, 1353
TasI	AATT	8 cut(s)	27, 336, 614, 1002, 1404, 1701, 1721, 1742
TatI	WGTACW	1 cut(s)	444
TauI	GCSGC	1 cut(s)	296
TfiI	GAWTC	4 cut(s)	204, 1600, 1861, 2031
Tru1I	TTAA	6 cut(s)	39, 404, 419, 696, 1241, 1605
Tru9I	TTAA	6 cut(s)	39, 404, 419, 696, 1241, 1605
TscAI	CASTG	3 cut(s)	616, 1090, 1837
TseFI	GTSAC	4 cut(s)	134, 534, 1317, 1735
TseI	GCWGC	6 cut(s)	647, 959, 1195, 1490, 1559, 2044
Tsp45I	GTSAC	4 cut(s)	134, 534, 1317, 1735
TspGWI	ACGGA	1 cut(s)	1398
TspRI	CASTG	3 cut(s)	616, 1090, 1837
VneI	GTGCAC	1 cut(s)	354
VpaK11BI	GGWCC	3 cut(s)	72, 257, 1990
XagI	CCTNNNNNAGG	1 cut(s)	184
XapI	RAATTY	3 cut(s)	336, 614, 1404
XceI	RCATGY	6 cut(s)	445, 686, 989, 1051, 1157, 1697
XcmI	CCANNNNNNNNNTGG	2 cut(s)	146, 2013
XmnI	GAANNNNTTC	1 cut(s)	1286
XspI	CTAG	4 cut(s)	1149, 1166, 1265, 1698
Zsp2I	ATGCAT	1 cut(s)	1346

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.