Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0009423

Physical Location & Seq

Genomic Coordinates Forward (+)

3261149 .. 3267399

Gene Structure 6251 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G10370.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 5328 bp

ATGAGGAACTCTTTTCCTCCTTCAGACGGTGGAAGATCGGCGACTGATCGTCGTCAGCAGTCGTCTCACTCATCCTCCACGAACCGTTATAACTCTCGCTCTGCACAATCTTCTCCGCCGCTCAACCACCGTCCTACTTGGAACCAGCAACACTCTCAGTACCCTAACTCAAATTTCCCGCCAAATTACAGGCGTGATCGTAATCCGTCGTCGGGATACTCGCCTCCAGTTACGCGGGCTAGACCTAATTTCATCGTTCAGCTGCTTCACCCCGCCGCCGCTAACAGTGACACAAAGCTGTGTTTTTCGACTAAGAAACAAGAGATCGAGAGTCTCGCTTTGCTTTGCGAAATTCCTGAGGAATCAATTCATGTGCCTCAATTTGGTTGTATCGCTGGAAGTTTCAGTTTTCGTCAGTGGGTCGATGCGCGCTCTGCCGTGGTGGCTCTTTGGGATTATCGACTTCAAGGGAAGCATGAGTTTGTTCCTGAGCTGATCCCTAATGTTATTGTTCCGTCTGACATGAACGAGCTTAAAGACAGGCTTCGTGATCTTTTCTCGTCTCATATTCTTTCGCTTATGGAAAATGGAGAAGGCGTCAAGAAGGTGAGGTTGGAGATTGAGGAGAAGTCTCGTCAAGTTGTGTCCTTTTCGTCTAAAAGGGGTCTTAAATTTGAGGTTTTTGAGAAAAAGAAGGCTATAGAGGCTGAGAGAGATTTGGTTGTGAATCGGCTTGAAGAATTCAATAATGCCATGAAGAGCATTTTGCGATATCTCATAGGACAAGACGGGTATGAGTTTGATTTAGATGATGAAGAAGAAGGAGACGTGGCCGTGTTTTGTTTGGAAGGGGCTTATGATTGGAGACGTATTCATTGTTTGATTCGTAGGGAGTGTCGAAGGCTAGAGGATGGACTTCCTATCTATGCCTACCGGCGGCAGATTTTGAAGAAAATTCATCGTGAACAGATAATGGTGTTGATTGGAGAAACTGGTTCAGGGAAGAGCACTCAGTTAGTTCAGTTCCTTGCTGATTCCGGAGTTGCTGCTAGTGAGTCGATTGTTTGTACACAACCACGGAAGATTGCTGCCATGACATTGGCTGATCGGGTCAGAGAAGAAAGCAGTGGTTGTTATGAGGAAAATACTGTTTCTTGTACTCCAACTTTTTCGTCTACTGAGGAGATTAGTTCCAAAGTTGTATACATGACGGATAATTGTCTGCTTCAGCACTACATGAAAGATCGGAGTTTGTCTGGCATTTCATGTGTTATTATTGACGAAGCTCATGAAAGAAGCTTAAACACGGACCTTCTGTTGGCATTGCTTAAAAAGTTGCTATCCAGAAGGATTGACCTGAGGCTTGTAATCATGTCTGCCACGGCCGATGCCAAACAACTTTCACAGTATTTCTTCAGTTGTGGTATTCTTCTTGTCAATGGGAGGAACTTTCCGGTGGAGATTGTATATTCCCCTAGTGACACAGAAGAGAATTCTGTTGTTGGCGGCATTGCTTCATATGTTGGCGATGTTGTTAAAATGGCAGTGGAAATACATAAAACAGAGAAAGAAGGAACCATCCTTGCATTCTTGACTTCCCAAGCAGAGGTAGAATGGGCATGCGAAAGGTTTATAACTCCGTCTGCAATTGCTTTGCCTTTGCATGGAAAGCTTTCCTTCGAAGAACAGTTTAGGGTTTTCCAGAACCATCCTGGGAGACGGAAAGTGATATTTGCCACAAATATTGCAGAGACGTCGCTGACTATTCCTGGTGTCAAGTATGTAATTGATTCCGGGATGGTGAAAGAGAGTAAATATGAACCTAGAACGGGGATGAGCATCCTCAAGGTGTGCCGGGTCAGTCAGAGTTCTGCTCGACAACGTGCTGGTCGTGCTGGAAGGACAGAACCCGGAAGATGTTACAGACTCTACTCAAAAAACGATTTTGATTCAATGAATCTTAATCAGGAACCAGAAATTCGGAGGGTCCATCTTGGTGTAGCACTTTTGAGGATGCTTGCTCTGGGTGTCAACAACATAGCAGAATTTAACTTTGTTGATGCGCCTGTCCCGGAAGCCATTGCAATGGCTGTCCAAAATCTTGTTCAGTTGGGTGCAGTTGTTGAGAAGAACGGTGTTCATGAATTAACACAGGAAGGGCATTGTTTAGTCAAGCTGGGGCTGGAGCCAAAGCTTGGAAAGTTAATTTTAGGCTGCTTCAGACACAGAATGGGCAAAGAGGGGATTGTTCTTGCTGCTGTCATGGCTAATGCTAGTAGTATATTTTGCAGAGTTGGCAACTTCGATGATAAGATGAAAGCTGATCGCCTAAAGGTGCAATTCTGCAATCAGAATGGAGACTTGTTCACTCTTCTTTCGGTGTACAAAGAATGGGCATCTCTGCCGCGAGAGAGAAGAAATAAATGGTGCTGGGAAAATAGCCTGAATGCCAAATCAATGAGGAGATGTGAAGACACAGTCAAGGAATTGGAGATATGCATTGAGAGAGAACTTACTCTTGTCAGTCCTAGTTACTGGGTTTGGAATCCAAATGAGGGTACTAAACACGACAAGCATTTGAAAATGGTTATACTTGCATCTCTTGCAGAAAACGTGGCGATGTACACTGGCTATAATCAGCTTGGATACGAGGTGGCATTGACTGGTCAACAAGTTCAGTTACATCCATCGTGTTCATTGCTAGCATTTGGCCAGAAGCCAAGCTGGGTTGTTTTCGGTGAACTTCTATCTATTGTGGACCAGTACTTGGTATGTGTAACTGCGTGTGATTTTGAAGCTTTGTATATGCTTGATCCACCACCACCTTTTGACGTATCCCAGATGGATGAGCGGAGGCTCCGAATTAAAAAAGTGGTTGGTTGTAGCAGCACTGTGCTAAAACGATTCTGTGGGAAATCTAATCGTAGTCTGCTTTCAATTGTTTCTCGTGCTAGGTCTCTTTGTTCGGATGAAAGGATTGGTATTCAAGTCGATGTTGATCAGAATGAGATTCGACTGTATGCGCCTCCCCTCGACATGGAAAAAGTGTCAGCCCTTGTGAACGATGCATTGGAATGTGAAAAGAAATGGATGCATAATGAATGTTTGGAGAAGTATCTATATCATGGTCGGGGACAAGTACCTATTGCACTGTTTGGATCTGGTGCTCAGATAAAGCATCTTGAAGTTGATCAGAGATTTCTGACAGTCGATGTACTTTATTATGGCGATGATGTTGTTGATGACAGAGAGCTTCTGACGTTTCTGGAGAAGAAGATTGATGGGTCTATTTGCTCTATATACAAGTTTGCTGCGAACAAGCAAGACTGTGATGAGAAGGAGAAGTGGGGTAGAATAACCTTTCTCACTCCAGAATCTGCTATGAAGGCAACAGAAATTCAGAAATTTTATTTCAAAGGATCAGTGCTCAAATTATTTCCATCACTGTCAACTGGTGGAGGAATTTTCAAGATGCCTTATTTCTCTTCCGTGACAGCTAAGATTCGTTGGCCGAGAAGGGAAAGCAGTGGTAGAGGATGTCTTAAGTGCCCTTCCGGAGATATTCACCGTATACTTGGTGATATATCCAGCCTTGAGATAGGAACAAATTATGTCCATATTCAGAGAGATCAACAGTCAAATGATTCTATCTTGATAAGTGGACTTGGAGATCTTTCGGAAGCAGAAGTTTTAGATGTTTTGGAATTCAGAACGCAGAGAAGAGATCTGAATTTTTTCATATTCAGAAAAAAATACAGTGTGCAGTGCCCATCTCCTACTGCTTGCGAAGAAGAGCTTCATAAGAGAATATTTGCGCGCATGTCAGCAAAGAATCCAGAGCCAAACTGTGTCCAAGTTCAAGTTTTTGAACCAAAAGAAGACAATTACTTCATGCGAGCGTTAATTAAGTTTGACGGGAGATTACATTTCGAAGCTGCAAAAGCTTTGCAAGAGTTAAATGGGGAGGTGCTACCTGGATGTCTTCCATGGCAGAAGATAAAGTGCGAACAATTGTTTCAGAGCTCCATAATCTGCTCCGCTTCTATCTACAACACTGTCAAAAGACAATTGAACGTTTTATTAGCAAGGTTTGAGAGACAAAAAGGGGGTGAATGCTGTCTGGAACCAACTCATAACGGGGCTTATCGTGTTAAAATTACTGCTTATGCAACAAGACCCGTTGCGGAGATGCGGAGAGAACTTGAAGAACTCTTAAGAGGAAGACCCATAAACCATCCAGGCTTCACACGTAGAGTCCTGCAGCATCTTATGTCCAGAGATGGTATTAATCTGATGCGGAAGATCCAGCAGGAGACAGAAACTTACATTCTATTAGATAGGCACAATCTCACAGTACGCATTTGTGGAACAAGTGAGAAAATTGCCAAGGCAGAACAAGAACTGATTCAGGCACTTATGGATTATCATGAGAGCAAGCAACTTGAAATCCACCTCCGAGGTCCTGAGATCCGTCCTGACCTCATGAAGGAAGTTGTGAAGCGGTTTGGTCCGGAGCTCCAAGGTATCAAAGAAAAGGTGCATGGTGTGGATCTCAAGCTCAACACCCGGTACCATGTTATTCAGGTTCATGGGAGCAAAGAAATGAGGCAGGAAGTACAAAAGATGGTCAATGAACTTGCACGAGAAAAGAGTGCACTGGGTGAAAAACCAGATGAGATTGAAGTTGAATGCCCCATTTGCTTGTCTGAAGTTGATGATGGCTACTCTCTTGAAGGATGTTCACACCTCTTCTGCAAAGCTTGTTTGTTGGAGCAATTTGAGGCATCGATGAGAAACTTTGACGCATTCCCAATACTTTGTTCTCACATAGACTGTGGAGCTCCAATAGTACTCGCTGATATGAGAGCCCTCTTATCACAAGAGAAGCTCGATGAACTCTTCAGCGCATCCTTGTCCTCTTTTGTAACATCCAGTGATGGAAAGTTCAGGTTTTGCTCCACACCTGATTGCCCTTCCGTCTACCGTGTAGCTGGACCTCAAGAATCTGGTGAGCCATTCATCTGTGGAGCATGTCACTCAGAAATATGCACAAGGTGTCACCTCGAGTATCACCCGTTAATCACTTGTGAAAGGTACAAAAAGTTCAAGGAAAATCCGGACTTGTCGCTAAAGGACTGGGCAAAAGGGAAGAACGTAAAGGAGTGTCCGATTTGCAAGTCGACGATAGAGAAGACTGATGGGTGTAACCATATGAAGTGCCGGTGTGGAAAGCACATTTGTTGGACCTGCTTAGACGTCTTCACTCAAGAAGAACCTTGTTATGCCCATTTAAGGACAATTCATGGTGGAATCGGATTAGTCGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010467 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0097159 GO:0140098 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

DEAD HA2 Helicase_C IBR OB_NTP_bind zf-C3HC4 zf-C3HC4_2 zf-RING_UBOX

Protein Analysis

1775

Amino Acids

201.36

Weight (kDa)

7.53

Isoelectric Point (pI)

49.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	312 - 466	2.2e-10	DEAD/DEAH box helicase
AAA_22	PF13401	321 - 458	9.7e-06	AAA domain
Helicase_C	PF00271	514 - 635	7e-14	Helicase conserved C-terminal domain
OB_NTP_bind	PF07717	860 - 937	2e-10	Oligonucleotide/oligosaccharide-binding (OB)-fold
RBD_DEAH11	PF24475	1036 - 1148	8.8e-47	DEAH11-like, RNA-binding domain
RRM_DEAH11	PF24637	1171 - 1250	3e-28	DEAH11 RRM domain
KH_DEAH11_1st	PF24638	1341 - 1405	1.4e-28	DEAH11 eukaryotic type KH-domain
KH_DEAH11_2nd	PF24641	1406 - 1480	5.9e-34	DEAH11 eukaryotic type KH-domain
KH_DEAH11	PF24471	1481 - 1549	9e-27	DEAH11-like, KH-domain
IBR	PF01485	1636 - 1696	1.8e-09	IBR domain, a half RING-finger domain
IBR_1	PF22191	1718 - 1757	3.6e-06	IBR domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009423)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G01020 AT5G10370
fragaria_vesca	FvH4_1g20200
malus_domestica	MD01G1036600.v1.1 MD15G1318100.v1.1
prunus_persica	Prupe.6G193800_v2.0.a1
pyrus_communis	pycom01g06330 pycom01g06340 pycom01g06350 pycom15g28060
rosa_chinensis	RchiOBHm_Chr2g0112281
rosa_laevigata	RLG00000017968
rosa_multiflora	Rmu_co8243893.1_g000001 Rmu_sc0004467.1_g000026 Rmu_sc0011951.1_g000004
rosa_roxburghii	Rroxscaffold_2G00131560
rosa_rugosa	Rorug02G0179800
rosa_samantha	Rh2AG232200 Rh2BG245500 Rh2CG236400 Rh2DG239900
rosa_wichuraiana	Rw2G018020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	90, 1634
AatII	GACGTC	2 cut(s)	1757, 5259
Acc36I	ACCTGC	1 cut(s)	5255
Acc65I	GGTACC	1 cut(s)	4569
AccB1I	GGYRCC	1 cut(s)	4569
AccB7I	CCANNNNNTGG	2 cut(s)	2195, 2767
AccBSI	CCGCTC	2 cut(s)	121, 2851
AccI	GTMKAC	5 cut(s)	1175, 1203, 3571, 4980, 5180
AccII	CGCG	4 cut(s)	235, 430, 2407, 3817
AccIII	TCCGGA	4 cut(s)	1037, 3554, 4510, 5116
AclI	AACGTT	1 cut(s)	4074
AclWI	GGATC	7 cut(s)	490, 2807, 3166, 3427, 4297, 4462, 4557
AcoI	YGGCCR	4 cut(s)	831, 1383, 2710, 3509
AcuI	CTGAAG	6 cut(s)	6, 1211, 1399, 2203, 4728, 4885
AcyI	GRCGYC	3 cut(s)	597, 1754, 5256
AdeI	CACNNNGTG	2 cut(s)	4661, 5055
AflII	CTTAAG	2 cut(s)	3542, 4213
AflIII	ACRYGT	1 cut(s)	4247
AhdI	GACNNNNNGTC	1 cut(s)	48
AjiI	CACGTC	1 cut(s)	829
AjnI	CCWGG	4 cut(s)	1711, 1768, 3973, 4237
AjuI	GAANNNNNNNTTGG	8 cut(s)	596, 628, 2088, 2120, 3053, 3085, 4804, 4836
Alw21I	GWGCWC	7 cut(s)	1010, 3169, 3429, 4025, 4518, 4657, 4843
Alw44I	GTGCAC	1 cut(s)	4653
AlwI	GGATC	7 cut(s)	490, 2807, 3166, 3427, 4297, 4462, 4557
AlwNI	CAGNNNCTG	1 cut(s)	3377
Ama87I	CYCGRG	1 cut(s)	5063
Aor13HI	TCCGGA	4 cut(s)	1037, 3554, 4510, 5116
AoxI	GGCC	4 cut(s)	831, 1383, 2710, 3509
ApaLI	GTGCAC	1 cut(s)	4653
ApeKI	GCWGC	9 cut(s)	262, 1046, 1088, 2214, 2255, 2886, 3311, 3935, 4261
AseI	ATTAAT	1 cut(s)	4287
Asp700I	GAANNNNTTC	5 cut(s)	366, 1672, 3734, 3795, 4404
Asp718I	GGTACC	1 cut(s)	4569
AspLEI	GCGC	7 cut(s)	430, 432, 2065, 3025, 3817, 3819, 4907
AspS9I	GGNCC	7 cut(s)	1309, 1987, 2758, 4460, 4508, 4994, 5244
AsuC2I	CCSGG	5 cut(s)	1795, 1856, 1911, 2072, 4567
AsuII	TTCGAA	2 cut(s)	1680, 3930
AsuNHI	GCTAGC	1 cut(s)	2701
AvaI	CYCGRG	1 cut(s)	5063
AvaII	GGWCC	7 cut(s)	1309, 1987, 2758, 4460, 4508, 4994, 5244
AxyI	CCTNAGG	2 cut(s)	357, 1358
BaeGI	GKGCMC	3 cut(s)	3551, 3770, 4657
BalI	TGGCCA	1 cut(s)	2712
BanI	GGYRCC	1 cut(s)	4569
BanII	GRGCYC	4 cut(s)	4025, 4518, 4843, 4870
BauI	CACGAG	2 cut(s)	2946, 4641
BbsI	GAAGAC	6 cut(s)	2478, 3885, 3974, 4228, 5198, 5251
Bbv12I	GWGCWC	7 cut(s)	1010, 3169, 3429, 4025, 4518, 4657, 4843
BbvI	GCAGC	9 cut(s)	249, 1033, 1075, 2201, 2242, 2898, 3298, 3922, 4273
BceAI	ACGGC	3 cut(s)	422, 818, 1398
BcgI	CGANNNNNNTGC	2 cut(s)	1737, 1771
BciT130I	CCWGG	4 cut(s)	1713, 1770, 3975, 4239
BciVI	GTATCC	3 cut(s)	209, 2639, 2845
BclI	TGATCA	2 cut(s)	2998, 3190
BcnI	CCSGG	5 cut(s)	1795, 1856, 1911, 2072, 4567
BfaI	CTAG	9 cut(s)	240, 905, 1050, 1476, 1824, 2274, 2529, 2702, 2952
BfmI	CTRYAG	2 cut(s)	699, 4259
BfrI	CTTAAG	2 cut(s)	3542, 4213
BfuAI	ACCTGC	1 cut(s)	5255
BfuI	GTATCC	3 cut(s)	209, 2639, 2845
BglI	GCCNNNNNGGC	1 cut(s)	443
BglII	AGATCT	2 cut(s)	3670, 3724
BmcAI	AGTACT	2 cut(s)	2765, 4851
Bme1390I	CCNGG	9 cut(s)	1713, 1770, 1795, 1856, 1911, 2072, 3975, 4239, 4567
Bme18I	GGWCC	7 cut(s)	1309, 1987, 2758, 4460, 4508, 4994, 5244
BmeRI	GACNNNNNGTC	1 cut(s)	48
BmeT110I	CYCGRG	1 cut(s)	5063
BmgBI	CACGTC	1 cut(s)	829
BmgT120I	GGNCC	7 cut(s)	1309, 1987, 2758, 4460, 4508, 4994, 5244
BmiI	GGNNCC	8 cut(s)	143, 1576, 1971, 1988, 2187, 2858, 4125, 4571
BmrFI	CCNGG	9 cut(s)	1713, 1770, 1795, 1856, 1911, 2072, 3975, 4239, 4567
BmrI	ACTGGG	3 cut(s)	2545, 4667, 5146
BmtI	GCTAGC	1 cut(s)	2705
BmuI	ACTGGG	3 cut(s)	2545, 4667, 5146
BpiI	GAAGAC	6 cut(s)	2478, 3885, 3974, 4228, 5198, 5251
BplI	GAGNNNNNCTC	2 cut(s)	1858, 1890
BpmI	CTGGAG	4 cut(s)	210, 2204, 3287, 3354
Bpu10I	CCTNAGC	1 cut(s)	489
Bpu14I	TTCGAA	2 cut(s)	1680, 3930
BpuEI	CTTGAG	5 cut(s)	1829, 3614, 4538, 4983, 5250
BpuMI	CCSGG	5 cut(s)	1795, 1856, 1911, 2072, 4567
Bsa29I	ATCGAT	1 cut(s)	4787
BsaAI	YACGTR	1 cut(s)	4250
BsaBI	GATNNNNATC	3 cut(s)	201, 1838, 2997
BsaHI	GRCGYC	3 cut(s)	597, 1754, 5256
BsaI	GGTCTC	1 cut(s)	2961
BsaJI	CCNNGG	8 cut(s)	438, 1076, 1380, 1712, 3986, 4386, 4456, 4519
BsaWI	WCCGGW	5 cut(s)	1037, 1453, 3554, 4510, 5116
BsaXI	ACNNNNNCTCC	4 cut(s)	59, 89, 582, 612
Bse118I	RCCGGY	2 cut(s)	933, 5220
Bse21I	CCTNAGG	2 cut(s)	357, 1358
Bse3DI	GCAATG	5 cut(s)	1322, 1509, 2079, 2091, 2696
Bse8I	GATNNNNATC	3 cut(s)	201, 1838, 2997
BseAI	TCCGGA	4 cut(s)	1037, 3554, 4510, 5116
BseBI	CCWGG	4 cut(s)	1713, 1770, 3975, 4239
BseCI	ATCGAT	1 cut(s)	4787
BseDI	CCNNGG	8 cut(s)	438, 1076, 1380, 1712, 3986, 4386, 4456, 4519
BseJI	GATNNNNATC	3 cut(s)	201, 1838, 2997
BseMI	GCAATG	5 cut(s)	1322, 1509, 2079, 2091, 2696
BsePI	GCGCGC	2 cut(s)	428, 3815
BseRI	GAGGAG	3 cut(s)	638, 1196, 2476
BseSI	GKGCMC	3 cut(s)	3551, 3770, 4657
BseX3I	CGGCCG	1 cut(s)	1383
BseXI	GCAGC	9 cut(s)	249, 1033, 1075, 2201, 2242, 2898, 3298, 3922, 4273
BseYI	CCCAGC	3 cut(s)	2176, 2430, 2724
BsgI	GTGCAG	3 cut(s)	87, 2136, 3782
Bsh1236I	CGCG	4 cut(s)	235, 430, 2407, 3817
Bsh1285I	CGRYCG	1 cut(s)	1386
BshFI	GGCC	4 cut(s)	833, 1385, 2712, 3511
BshNI	GGYRCC	1 cut(s)	4569
BshVI	ATCGAT	1 cut(s)	4787
BsiEI	CGRYCG	1 cut(s)	1386
BsiHKAI	GWGCWC	7 cut(s)	1010, 3169, 3429, 4025, 4518, 4657, 4843
BsiHKCI	CYCGRG	1 cut(s)	5063
BslFI	GGGAC	2 cut(s)	2054, 3147
BsmBI	CGTCTC	6 cut(s)	69, 567, 819, 859, 1711, 1745
BsmFI	GGGAC	2 cut(s)	2054, 3147
BsmI	GAATGC	5 cut(s)	1586, 2452, 4118, 4694, 4805
BsnI	GGCC	4 cut(s)	833, 1385, 2712, 3511
Bso31I	GGTCTC	1 cut(s)	2961
BsoBI	CYCGRG	1 cut(s)	5063
Bsp119I	TTCGAA	2 cut(s)	1680, 3930
Bsp13I	TCCGGA	4 cut(s)	1037, 3554, 4510, 5116
Bsp1407I	TGTACA	3 cut(s)	1067, 2382, 2622
Bsp19I	CCATGG	1 cut(s)	3986
BspANI	GGCC	4 cut(s)	833, 1385, 2712, 3511
BspDI	ATCGAT	1 cut(s)	4787
BspEI	TCCGGA	4 cut(s)	1037, 3554, 4510, 5116
BspFNI	CGCG	4 cut(s)	235, 430, 2407, 3817
BspHI	TCATGA	4 cut(s)	1288, 2140, 4426, 4482
BspLI	GGNNCC	8 cut(s)	143, 1576, 1971, 1988, 2187, 2858, 4125, 4571
BspMAI	CTGCAG	1 cut(s)	4263
BspMI	ACCTGC	1 cut(s)	5255
BspOI	GCTAGC	1 cut(s)	2705
BspPI	GGATC	7 cut(s)	490, 2807, 3166, 3427, 4297, 4462, 4557
BspQI	GCTCTTC	3 cut(s)	752, 998, 3786
BspT104I	TTCGAA	2 cut(s)	1680, 3930
BspT107I	GGYRCC	1 cut(s)	4569
BspTI	CTTAAG	2 cut(s)	3542, 4213
BspTNI	GGTCTC	1 cut(s)	2961
BsrBI	CCGCTC	2 cut(s)	121, 2851
BsrDI	GCAATG	5 cut(s)	1322, 1509, 2079, 2091, 2696
BsrFI	RCCGGY	2 cut(s)	933, 5220
BsrGI	TGTACA	3 cut(s)	1067, 2382, 2622
BssAI	RCCGGY	2 cut(s)	933, 5220
BssECI	CCNNGG	8 cut(s)	438, 1076, 1380, 1712, 3986, 4386, 4456, 4519
BssHII	GCGCGC	2 cut(s)	428, 3815
BssNAI	GTATAC	2 cut(s)	1204, 3572
BssNI	GRCGYC	3 cut(s)	597, 1754, 5256
BssSI	CACGAG	2 cut(s)	2946, 4641
BssT1I	CCWWGG	3 cut(s)	3986, 4386, 4519
Bst1107I	GTATAC	2 cut(s)	1204, 3572
Bst2BI	CACGAG	2 cut(s)	2946, 4641
Bst2UI	CCWGG	4 cut(s)	1713, 1770, 3975, 4239
Bst6I	CTCTTC	9 cut(s)	752, 998, 1482, 2376, 3490, 3715, 3786, 4754, 4904
BstACI	GRCGYC	3 cut(s)	597, 1754, 5256
BstAFI	CTTAAG	2 cut(s)	3542, 4213
BstAPI	GCANNNNNTGC	1 cut(s)	2603
BstAUI	TGTACA	3 cut(s)	1067, 2382, 2622
BstBAI	YACGTR	1 cut(s)	4250
BstBI	TTCGAA	2 cut(s)	1680, 3930
BstC8I	GCNNGC	9 cut(s)	237, 430, 1621, 2019, 2703, 3784, 3817, 3897, 4436
BstDSI	CCRYGG	4 cut(s)	438, 1076, 1380, 3986
BstENI	CCTNNNNNAGG	1 cut(s)	4484
BstFNI	CGCG	4 cut(s)	235, 430, 2407, 3817
BstHHI	GCGC	7 cut(s)	430, 432, 2065, 3025, 3817, 3819, 4907
BstMCI	CGRYCG	1 cut(s)	1386
BstNI	CCWGG	4 cut(s)	1713, 1770, 3975, 4239
BstNSI	RCATGY	3 cut(s)	1623, 3823, 5034
BstSCI	CCNGG	9 cut(s)	1711, 1768, 1793, 1854, 1909, 2070, 3973, 4237, 4565
BstSFI	CTRYAG	2 cut(s)	699, 4259
BstSLI	GKGCMC	3 cut(s)	3551, 3770, 4657
BstUI	CGCG	4 cut(s)	235, 430, 2407, 3817
BstV1I	GCAGC	9 cut(s)	249, 1033, 1075, 2201, 2242, 2898, 3298, 3922, 4273
BstV2I	GAAGAC	6 cut(s)	2478, 3885, 3974, 4228, 5198, 5251
BstX2I	RGATCY	6 cut(s)	3158, 3670, 3724, 4302, 4467, 4549
BstXI	CCANNNNNNTGG	2 cut(s)	1099, 2086
BstYI	RGATCY	6 cut(s)	3158, 3670, 3724, 4302, 4467, 4549
BstZ17I	GTATAC	2 cut(s)	1204, 3572
BstZI	CGGCCG	1 cut(s)	1383
Bsu15I	ATCGAT	1 cut(s)	4787
Bsu36I	CCTNAGG	2 cut(s)	357, 1358
BsuI	GTATCC	3 cut(s)	209, 2639, 2845
BsuRI	GGCC	4 cut(s)	833, 1385, 2712, 3511
BsuTUI	ATCGAT	1 cut(s)	4787
BtgI	CCRYGG	4 cut(s)	438, 1076, 1380, 3986
BtgZI	GCGATG	3 cut(s)	1542, 2633, 3243
BtrI	CACGTC	1 cut(s)	829
BtsI	GCAGTG	4 cut(s)	1132, 1551, 3532, 3770
BveI	ACCTGC	1 cut(s)	5255
Cac8I	GCNNGC	9 cut(s)	237, 430, 1621, 2019, 2703, 3784, 3817, 3897, 4436
CaiI	CAGNNNCTG	1 cut(s)	3377
CciI	TCATGA	4 cut(s)	1288, 2140, 4426, 4482
CfoI	GCGC	7 cut(s)	430, 432, 2065, 3025, 3817, 3819, 4907
Cfr10I	RCCGGY	2 cut(s)	933, 5220
Cfr13I	GGNCC	7 cut(s)	1309, 1987, 2758, 4460, 4508, 4994, 5244
ClaI	ATCGAT	1 cut(s)	4787
CseI	GACGC	2 cut(s)	586, 4811
CspCI	CAANNNNNGTGG	2 cut(s)	1726, 1761
DraIII	CACNNNGTG	2 cut(s)	4661, 5055
DriI	GACNNNNNGTC	1 cut(s)	48
EaeI	YGGCCR	4 cut(s)	831, 1383, 2710, 3509
EagI	CGGCCG	1 cut(s)	1383
Eam1104I	CTCTTC	9 cut(s)	752, 998, 1482, 2376, 3490, 3715, 3786, 4754, 4904
Eam1105I	GACNNNNNGTC	1 cut(s)	48
EarI	CTCTTC	9 cut(s)	752, 998, 1482, 2376, 3490, 3715, 3786, 4754, 4904
EciI	GGCGGA	1 cut(s)	105
Ecl136II	GAGCTC	3 cut(s)	4023, 4516, 4841
EclXI	CGGCCG	1 cut(s)	1383
Eco130I	CCWWGG	3 cut(s)	3986, 4386, 4519
Eco24I	GRGCYC	4 cut(s)	4025, 4518, 4843, 4870
Eco31I	GGTCTC	1 cut(s)	2961
Eco32I	GATATC	1 cut(s)	773
Eco47I	GGWCC	7 cut(s)	1309, 1987, 2758, 4460, 4508, 4994, 5244
Eco52I	CGGCCG	1 cut(s)	1383
Eco53kI	GAGCTC	3 cut(s)	4023, 4516, 4841
Eco57I	CTGAAG	6 cut(s)	6, 1211, 1399, 2203, 4728, 4885
Eco81I	CCTNAGG	2 cut(s)	357, 1358
Eco88I	CYCGRG	1 cut(s)	5063
EcoICRI	GAGCTC	3 cut(s)	4023, 4516, 4841
EcoNI	CCTNNNNNAGG	1 cut(s)	4484
EcoO109I	RGGNCCY	1 cut(s)	4460
EcoRI	GAATTC	3 cut(s)	740, 1492, 3704
EcoRII	CCWGG	4 cut(s)	1711, 1768, 3973, 4237
EcoRV	GATATC	1 cut(s)	773
EcoT14I	CCWWGG	3 cut(s)	3986, 4386, 4519
EcoT22I	ATGCAT	3 cut(s)	2501, 3070, 3096
EcoT38I	GRGCYC	4 cut(s)	4025, 4518, 4843, 4870
ErhI	CCWWGG	3 cut(s)	3986, 4386, 4519
Esp3I	CGTCTC	6 cut(s)	69, 567, 819, 859, 1711, 1745
FalI	AAGNNNNNCTT	6 cut(s)	528, 560, 1661, 1693, 3780, 3812
FaqI	GGGAC	2 cut(s)	2054, 3147
FauI	CCCGC	3 cut(s)	186, 228, 280
FauNDI	CATATG	2 cut(s)	1519, 5211
FbaI	TGATCA	2 cut(s)	2998, 3190
FblI	GTMKAC	5 cut(s)	1175, 1203, 3571, 4980, 5180
FriOI	GRGCYC	4 cut(s)	4025, 4518, 4843, 4870
FspBI	CTAG	9 cut(s)	240, 905, 1050, 1476, 1824, 2274, 2529, 2702, 2952
GlaI	GCGC	7 cut(s)	429, 431, 2064, 3024, 3816, 3818, 4906
GsaI	CCCAGC	3 cut(s)	2180, 2434, 2728
GsuI	CTGGAG	4 cut(s)	210, 2204, 3287, 3354
HaeIII	GGCC	4 cut(s)	833, 1385, 2712, 3511
HgaI	GACGC	2 cut(s)	586, 4811
HhaI	GCGC	7 cut(s)	430, 432, 2065, 3025, 3817, 3819, 4907
Hin1I	GRCGYC	3 cut(s)	597, 1754, 5256
Hin6I	GCGC	7 cut(s)	428, 430, 2063, 3023, 3815, 3817, 4905
HinP1I	GCGC	7 cut(s)	428, 430, 2063, 3023, 3815, 3817, 4905
HincII	GTYRAC	4 cut(s)	2032, 2669, 3450, 5181
HindII	GTYRAC	4 cut(s)	2032, 2669, 3450, 5181
HindIII	AAGCTT	6 cut(s)	1297, 1670, 2192, 2796, 3942, 4758
Hpy99I	CGWCG	5 cut(s)	54, 211, 214, 1759, 5185
Hsp92I	GRCGYC	3 cut(s)	597, 1754, 5256
HspAI	GCGC	7 cut(s)	428, 430, 2063, 3023, 3815, 3817, 4905
Kpn2I	TCCGGA	4 cut(s)	1037, 3554, 4510, 5116
KpnI	GGTACC	1 cut(s)	4573
Ksp22I	TGATCA	2 cut(s)	2998, 3190
LguI	GCTCTTC	3 cut(s)	752, 998, 3786
Lsp1109I	GCAGC	9 cut(s)	249, 1033, 1075, 2201, 2242, 2898, 3298, 3922, 4273
MaeI	CTAG	9 cut(s)	240, 905, 1050, 1476, 1824, 2274, 2529, 2702, 2952
MbiI	CCGCTC	2 cut(s)	121, 2851
MfeI	CAATTG	4 cut(s)	1647, 2937, 4010, 4067
MflI	RGATCY	6 cut(s)	3158, 3670, 3724, 4302, 4467, 4549
MlsI	TGGCCA	1 cut(s)	2712
MluNI	TGGCCA	1 cut(s)	2712
MlyI	GAGTC	4 cut(s)	340, 1064, 1920, 4263
MmeI	TCCRAC	4 cut(s)	594, 1187, 4749, 5222
Mox20I	TGGCCA	1 cut(s)	2712
Mph1103I	ATGCAT	3 cut(s)	2501, 3070, 3096
MroI	TCCGGA	4 cut(s)	1037, 3554, 4510, 5116
MroXI	GAANNNNTTC	5 cut(s)	366, 1672, 3734, 3795, 4404
MscI	TGGCCA	1 cut(s)	2712
MslI	CAYNNNNRTG	3 cut(s)	1995, 2084, 3073
Msp20I	TGGCCA	1 cut(s)	2712
MspA1I	CMGCKG	1 cut(s)	262
MspCI	CTTAAG	2 cut(s)	3542, 4213
MspR9I	CCNGG	9 cut(s)	1713, 1770, 1795, 1856, 1911, 2072, 3975, 4239, 4567
MunI	CAATTG	4 cut(s)	1647, 2937, 4010, 4067
Mva1269I	GAATGC	5 cut(s)	1586, 2452, 4118, 4694, 4805
MvaI	CCWGG	4 cut(s)	1713, 1770, 3975, 4239
MvnI	CGCG	4 cut(s)	235, 430, 2407, 3817
NciI	CCSGG	5 cut(s)	1795, 1856, 1911, 2072, 4567
NcoI	CCATGG	1 cut(s)	3986
NdeI	CATATG	2 cut(s)	1519, 5211
NheI	GCTAGC	1 cut(s)	2701
NlaIV	GGNNCC	8 cut(s)	143, 1576, 1971, 1988, 2187, 2858, 4125, 4571
NmeAIII	GCCGAG	1 cut(s)	3537
NmuCI	GTSAC	5 cut(s)	287, 1478, 3490, 5033, 5057
NsiI	ATGCAT	3 cut(s)	2501, 3070, 3096
NspI	RCATGY	3 cut(s)	1623, 3823, 5034
NspV	TTCGAA	2 cut(s)	1680, 3930
PacI	TTAATTAA	1 cut(s)	3906
PaeI	GCATGC	1 cut(s)	1623
PaeR7I	CTCGAG	1 cut(s)	5063
PagI	TCATGA	4 cut(s)	1288, 2140, 4426, 4482
PauI	GCGCGC	2 cut(s)	428, 3815
PciSI	GCTCTTC	3 cut(s)	752, 998, 3786
PcsI	WCGNNNNNNNCGW	2 cut(s)	1888, 5319
PctI	GAATGC	5 cut(s)	1586, 2452, 4118, 4694, 4805
PdmI	GAANNNNTTC	5 cut(s)	366, 1672, 3734, 3795, 4404
PflFI	GACNNNGTC	1 cut(s)	2477
PflMI	CCANNNNNTGG	2 cut(s)	2195, 2767
PfoI	TCCNGGA	2 cut(s)	1793, 2070
PleI	GAGTC	4 cut(s)	339, 1063, 1920, 4262
PpsI	GAGTC	4 cut(s)	339, 1063, 1920, 4262
Ppu21I	YACGTR	1 cut(s)	4250
PpuMI	RGGWCCY	1 cut(s)	4460
PshBI	ATTAAT	1 cut(s)	4287
PsiI	TTATAA	2 cut(s)	90, 1634
Psp124BI	GAGCTC	3 cut(s)	4025, 4518, 4843
Psp1406I	AACGTT	1 cut(s)	4074
Psp5II	RGGWCCY	1 cut(s)	4460
Psp6I	CCWGG	4 cut(s)	1711, 1768, 3973, 4237
PspFI	CCCAGC	3 cut(s)	2176, 2430, 2724
PspGI	CCWGG	4 cut(s)	1711, 1768, 3973, 4237
PspN4I	GGNNCC	8 cut(s)	143, 1576, 1971, 1988, 2187, 2858, 4125, 4571
PspPI	GGNCC	7 cut(s)	1309, 1987, 2758, 4460, 4508, 4994, 5244
PspPPI	RGGWCCY	1 cut(s)	4460
PspXI	VCTCGAGB	1 cut(s)	5063
PsrI	GAACNNNNNNTAC	2 cut(s)	5087, 5119
PstI	CTGCAG	1 cut(s)	4263
PstNI	CAGNNNCTG	1 cut(s)	3377
PsuI	RGATCY	6 cut(s)	3158, 3670, 3724, 4302, 4467, 4549
PsyI	GACNNNGTC	1 cut(s)	2477
PteI	GCGCGC	2 cut(s)	428, 3815
PvuII	CAGCTG	1 cut(s)	262
RseI	CAYNNNNRTG	3 cut(s)	1995, 2084, 3073
SacI	GAGCTC	3 cut(s)	4025, 4518, 4843
SalI	GTCGAC	1 cut(s)	5179
SapI	GCTCTTC	3 cut(s)	752, 998, 3786
Sau96I	GGNCC	7 cut(s)	1309, 1987, 2758, 4460, 4508, 4994, 5244
ScaI	AGTACT	2 cut(s)	2765, 4851
SchI	GAGTC	4 cut(s)	340, 1064, 1920, 4263
ScrFI	CCNGG	9 cut(s)	1713, 1770, 1795, 1856, 1911, 2072, 3975, 4239, 4567
SfcI	CTRYAG	2 cut(s)	699, 4259
Sfr274I	CTCGAG	1 cut(s)	5063
SfuI	TTCGAA	2 cut(s)	1680, 3930
SinI	GGWCC	7 cut(s)	1309, 1987, 2758, 4460, 4508, 4994, 5244
SlaI	CTCGAG	1 cut(s)	5063
SmiMI	CAYNNNNRTG	3 cut(s)	1995, 2084, 3073
SmlI	CTYRAG	8 cut(s)	1844, 3542, 3593, 4213, 4553, 4998, 5063, 5265
SmoI	CTYRAG	8 cut(s)	1844, 3542, 3593, 4213, 4553, 4998, 5063, 5265
SphI	GCATGC	1 cut(s)	1623
SspI	AATATT	2 cut(s)	1744, 3810
SspMI	CTAG	9 cut(s)	240, 905, 1050, 1476, 1824, 2274, 2529, 2702, 2952
SstI	GAGCTC	3 cut(s)	4025, 4518, 4843
StyD4I	CCNGG	9 cut(s)	1711, 1768, 1793, 1854, 1909, 2070, 3973, 4237, 4565
StyI	CCWWGG	3 cut(s)	3986, 4386, 4519
TatI	WGTACW	8 cut(s)	1067, 1157, 2382, 2622, 2763, 3214, 4615, 4849
TauI	GCSGC	6 cut(s)	121, 278, 281, 940, 1509, 2407
TseFI	GTSAC	5 cut(s)	287, 1478, 3490, 5033, 5057
TseI	GCWGC	9 cut(s)	262, 1046, 1088, 2214, 2255, 2886, 3311, 3935, 4261
Tsp45I	GTSAC	5 cut(s)	287, 1478, 3490, 5033, 5057
Tth111I	GACNNNGTC	1 cut(s)	2477
Van91I	CCANNNNNTGG	2 cut(s)	2195, 2767
Vha464I	CTTAAG	2 cut(s)	3542, 4213
VneI	GTGCAC	1 cut(s)	4653
VpaK11BI	GGWCC	7 cut(s)	1309, 1987, 2758, 4460, 4508, 4994, 5244
VspI	ATTAAT	1 cut(s)	4287
XagI	CCTNNNNNAGG	1 cut(s)	4484
XceI	RCATGY	3 cut(s)	1623, 3823, 5034
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1709
XhoI	CTCGAG	1 cut(s)	5063
XmiI	GTMKAC	5 cut(s)	1175, 1203, 3571, 4980, 5180
XmnI	GAANNNNTTC	5 cut(s)	366, 1672, 3734, 3795, 4404
XspI	CTAG	9 cut(s)	240, 905, 1050, 1476, 1824, 2274, 2529, 2702, 2952
ZraI	GACGTC	2 cut(s)	1755, 5257
ZrmI	AGTACT	2 cut(s)	2765, 4851
Zsp2I	ATGCAT	3 cut(s)	2501, 3070, 3096

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.