Helicase associated domain (HA2) Add an annotation
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G01020 AT5G10370 |
| fragaria_vesca | FvH4_1g20200 |
| malus_domestica | MD01G1036600.v1.1 MD15G1318100.v1.1 |
| prunus_persica | Prupe.6G193800_v2.0.a1 |
| pyrus_communis | pycom01g06330 pycom01g06340 pycom01g06350 pycom15g28060 |
| rosa_chinensis | RchiOBHm_Chr2g0112281 |
| rosa_laevigata | RLG00000017968 |
| rosa_multiflora | Rmu_co8243893.1_g000001 Rmu_sc0004467.1_g000026 Rmu_sc0011951.1_g000004 |
| rosa_roxburghii | Rroxscaffold_2G00131560 |
| rosa_rugosa | Rorug02G0179800 |
| rosa_samantha | Rh2AG232200 Rh2BG245500 Rh2CG236400 Rh2DG239900 |
| rosa_wichuraiana | Rw2G018020 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1238, 2082 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1039 |
| Acc36I | ACCTGC | 4 cut(s) | 826, 1693, 4680, 5022 |
| Acc65I | GGTACC | 1 cut(s) | 4393 |
| AccB1I | GGYRCC | 2 cut(s) | 4393, 4908 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1526, 2338 |
| AccI | GTMKAC | 4 cut(s) | 118, 1090, 2666, 5036 |
| AccII | CGCG | 3 cut(s) | 30, 293, 325 |
| AclWI | GGATC | 6 cut(s) | 1727, 1834, 2229, 4297, 4777, 4961 |
| AcoI | YGGCCR | 6 cut(s) | 98, 969, 1750, 1950, 3213, 5163 |
| AcuI | CTGAAG | 5 cut(s) | 800, 1892, 1956, 3314, 4212 |
| AcvI | CACGTG | 2 cut(s) | 716, 2810 |
| AcyI | GRCGYC | 2 cut(s) | 195, 5111 |
| AdeI | CACNNNGTG | 2 cut(s) | 1505, 2289 |
| AfaI | GTAC | 9 cut(s) | 877, 1416, 2395, 2752, 3692, 4212, 4395, 4903, 4949 |
| AflII | CTTAAG | 1 cut(s) | 2192 |
| AflIII | ACRYGT | 5 cut(s) | 2533, 2809, 4054, 4898, 5008 |
| AgeI | ACCGGT | 1 cut(s) | 363 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 4825 |
| AjiI | CACGTC | 3 cut(s) | 963, 3412, 4055 |
| AleI | CACNNNNGTG | 1 cut(s) | 1857 |
| AloI | GAACNNNNNNTCC | 6 cut(s) | 1824, 1856, 2009, 2041, 3456, 3488 |
| Alw21I | GWGCWC | 4 cut(s) | 156, 399, 4678, 4752 |
| Alw26I | GTCTC | 5 cut(s) | 268, 1607, 4163, 4698, 4889 |
| Alw44I | GTGCAC | 1 cut(s) | 4674 |
| AlwI | GGATC | 6 cut(s) | 1727, 1834, 2229, 4297, 4777, 4961 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 841, 4123, 4403 |
| Ama87I | CYCGRG | 6 cut(s) | 136, 296, 389, 756, 2488, 4331 |
| ApaI | GGGCCC | 1 cut(s) | 487 |
| ApaLI | GTGCAC | 1 cut(s) | 4674 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 4495, 4527 |
| AseI | ATTAAT | 2 cut(s) | 2066, 2307 |
| AsiGI | ACCGGT | 1 cut(s) | 363 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1297, 3743 |
| Asp718I | GGTACC | 1 cut(s) | 4393 |
| AspLEI | GCGC | 2 cut(s) | 32, 295 |
| AspS9I | GGNCC | 9 cut(s) | 17, 132, 286, 403, 483, 484, 838, 4246, 4758 |
| AsuC2I | CCSGG | 4 cut(s) | 335, 4906, 4952, 5024 |
| AsuHPI | GGTGA | 6 cut(s) | 695, 1844, 2585, 2612, 3332, 4874 |
| AsuII | TTCGAA | 1 cut(s) | 515 |
| AvaI | CYCGRG | 6 cut(s) | 136, 296, 389, 756, 2488, 4331 |
| AvaII | GGWCC | 5 cut(s) | 17, 286, 403, 838, 4246 |
| BaeGI | GKGCMC | 2 cut(s) | 487, 4678 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2821, 2854 |
| BalI | TGGCCA | 2 cut(s) | 1952, 5165 |
| BanI | GGYRCC | 2 cut(s) | 4393, 4908 |
| BanII | GRGCYC | 4 cut(s) | 399, 487, 4383, 4752 |
| BbrPI | CACGTG | 2 cut(s) | 716, 2810 |
| BbsI | GAAGAC | 5 cut(s) | 1222, 1551, 4057, 4085, 4210 |
| Bbv12I | GWGCWC | 4 cut(s) | 156, 399, 4678, 4752 |
| BbvCI | CCTCAGC | 2 cut(s) | 48, 1397 |
| BceAI | ACGGC | 5 cut(s) | 99, 182, 364, 1737, 4410 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2519, 2553 |
| BclI | TGATCA | 4 cut(s) | 1194, 2497, 3513, 3912 |
| BcnI | CCSGG | 4 cut(s) | 335, 4906, 4952, 5024 |
| BcoDI | GTCTC | 5 cut(s) | 268, 1607, 4163, 4698, 4889 |
| BfaI | CTAG | 7 cut(s) | 1208, 1221, 1365, 2391, 2583, 3095, 3486 |
| BfmI | CTRYAG | 6 cut(s) | 1094, 3618, 3706, 4000, 4160, 4798 |
| BfrI | CTTAAG | 1 cut(s) | 2192 |
| BfuAI | ACCTGC | 4 cut(s) | 826, 1693, 4680, 5022 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 3376 |
| BglII | AGATCT | 1 cut(s) | 3532 |
| BlpI | GCTNAGC | 2 cut(s) | 918, 3380 |
| BmcAI | AGTACT | 1 cut(s) | 2752 |
| Bme18I | GGWCC | 5 cut(s) | 17, 286, 403, 838, 4246 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 4825 |
| BmeT110I | CYCGRG | 6 cut(s) | 136, 296, 389, 756, 2488, 4331 |
| BmgBI | CACGTC | 3 cut(s) | 963, 3412, 4055 |
| BmgT120I | GGNCC | 9 cut(s) | 17, 132, 286, 403, 483, 484, 838, 4246, 4758 |
| BmrI | ACTGGG | 2 cut(s) | 481, 3192 |
| BmuI | ACTGGG | 2 cut(s) | 481, 3192 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1086 |
| BpiI | GAAGAC | 5 cut(s) | 1222, 1551, 4057, 4085, 4210 |
| BpmI | CTGGAG | 4 cut(s) | 383, 3068, 4114, 4763 |
| Bpu10I | CCTNAGC | 2 cut(s) | 48, 1397 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 918, 3380 |
| Bpu14I | TTCGAA | 1 cut(s) | 515 |
| BpuEI | CTTGAG | 1 cut(s) | 2253 |
| BpuMI | CCSGG | 4 cut(s) | 335, 4906, 4952, 5024 |
| BsaAI | YACGTR | 3 cut(s) | 716, 2096, 2810 |
| BsaBI | GATNNNNATC | 3 cut(s) | 2220, 2859, 4301 |
| BsaHI | GRCGYC | 2 cut(s) | 195, 5111 |
| BsaI | GGTCTC | 2 cut(s) | 268, 4698 |
| BsaWI | WCCGGW | 1 cut(s) | 363 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 611, 641, 3603, 3633 |
| Bse118I | RCCGGY | 4 cut(s) | 96, 363, 405, 4578 |
| Bse1I | ACTGG | 6 cut(s) | 487, 865, 2136, 2743, 3181, 3187 |
| Bse3DI | GCAATG | 2 cut(s) | 639, 5134 |
| Bse8I | GATNNNNATC | 3 cut(s) | 2220, 2859, 4301 |
| BseGI | GGATG | 8 cut(s) | 109, 559, 2545, 2958, 3112, 3421, 3562, 4924 |
| BseJI | GATNNNNATC | 3 cut(s) | 2220, 2859, 4301 |
| BseMI | GCAATG | 2 cut(s) | 639, 5134 |
| BseNI | ACTGG | 6 cut(s) | 487, 865, 2136, 2743, 3181, 3187 |
| BseSI | GKGCMC | 2 cut(s) | 487, 4678 |
| BseX3I | CGGCCG | 1 cut(s) | 98 |
| BseYI | CCCAGC | 2 cut(s) | 831, 5097 |
| BsgI | GTGCAG | 1 cut(s) | 908 |
| Bsh1236I | CGCG | 3 cut(s) | 30, 293, 325 |
| Bsh1285I | CGRYCG | 3 cut(s) | 101, 334, 2023 |
| BshNI | GGYRCC | 2 cut(s) | 4393, 4908 |
| BshTI | ACCGGT | 1 cut(s) | 363 |
| BsiEI | CGRYCG | 3 cut(s) | 101, 334, 2023 |
| BsiHKAI | GWGCWC | 4 cut(s) | 156, 399, 4678, 4752 |
| BsiHKCI | CYCGRG | 6 cut(s) | 136, 296, 389, 756, 2488, 4331 |
| BslFI | GGGAC | 3 cut(s) | 1450, 2505, 4867 |
| BsmAI | GTCTC | 5 cut(s) | 268, 1607, 4163, 4698, 4889 |
| BsmBI | CGTCTC | 1 cut(s) | 4163 |
| BsmFI | GGGAC | 3 cut(s) | 1450, 2505, 4867 |
| BsmI | GAATGC | 4 cut(s) | 3711, 3745, 3991, 5138 |
| Bso31I | GGTCTC | 2 cut(s) | 268, 4698 |
| BsoBI | CYCGRG | 6 cut(s) | 136, 296, 389, 756, 2488, 4331 |
| Bsp119I | TTCGAA | 1 cut(s) | 515 |
| Bsp120I | GGGCCC | 1 cut(s) | 483 |
| Bsp1286I | GDGCHC | 6 cut(s) | 156, 399, 487, 4383, 4678, 4752 |
| Bsp1407I | TGTACA | 1 cut(s) | 4210 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 918, 3380 |
| Bsp19I | CCATGG | 2 cut(s) | 3102, 4375 |
| BspFNI | CGCG | 3 cut(s) | 30, 293, 325 |
| BspHI | TCATGA | 2 cut(s) | 1156, 3747 |
| BspMAI | CTGCAG | 2 cut(s) | 1098, 3710 |
| BspMI | ACCTGC | 4 cut(s) | 826, 1693, 4680, 5022 |
| BspPI | GGATC | 6 cut(s) | 1727, 1834, 2229, 4297, 4777, 4961 |
| BspQI | GCTCTTC | 1 cut(s) | 5009 |
| BspT104I | TTCGAA | 1 cut(s) | 515 |
| BspT107I | GGYRCC | 2 cut(s) | 4393, 4908 |
| BspTI | CTTAAG | 1 cut(s) | 2192 |
| BspTNI | GGTCTC | 2 cut(s) | 268, 4698 |
| BsrDI | GCAATG | 2 cut(s) | 639, 5134 |
| BsrFI | RCCGGY | 4 cut(s) | 96, 363, 405, 4578 |
| BsrGI | TGTACA | 1 cut(s) | 4210 |
| BsrI | ACTGG | 6 cut(s) | 487, 865, 2136, 2743, 3181, 3187 |
| BssAI | RCCGGY | 4 cut(s) | 96, 363, 405, 4578 |
| BssNAI | GTATAC | 1 cut(s) | 5037 |
| BssNI | GRCGYC | 2 cut(s) | 195, 5111 |
| BssT1I | CCWWGG | 5 cut(s) | 1855, 2071, 2931, 3102, 4375 |
| Bst1107I | GTATAC | 1 cut(s) | 5037 |
| Bst4CI | ACNGT | 8 cut(s) | 641, 882, 1088, 2021, 2189, 2786, 3073, 4036 |
| Bst6I | CTCTTC | 2 cut(s) | 566, 5009 |
| BstACI | GRCGYC | 2 cut(s) | 195, 5111 |
| BstAFI | CTTAAG | 1 cut(s) | 2192 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 1505, 4889, 5133 |
| BstAUI | TGTACA | 1 cut(s) | 4210 |
| BstBAI | YACGTR | 3 cut(s) | 716, 2096, 2810 |
| BstBI | TTCGAA | 1 cut(s) | 515 |
| BstC8I | GCNNGC | 7 cut(s) | 483, 648, 695, 3863, 4096, 4584, 4943 |
| BstDSI | CCRYGG | 2 cut(s) | 3102, 4375 |
| BstF5I | GGATG | 8 cut(s) | 109, 559, 2545, 2958, 3112, 3421, 3562, 4924 |
| BstFNI | CGCG | 3 cut(s) | 30, 293, 325 |
| BstHHI | GCGC | 2 cut(s) | 32, 295 |
| BstMAI | GTCTC | 5 cut(s) | 268, 1607, 4163, 4698, 4889 |
| BstMCI | CGRYCG | 3 cut(s) | 101, 334, 2023 |
| BstNSI | RCATGY | 4 cut(s) | 2537, 4887, 4902, 5012 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1086 |
| BstSFI | CTRYAG | 6 cut(s) | 1094, 3618, 3706, 4000, 4160, 4798 |
| BstSLI | GKGCMC | 2 cut(s) | 487, 4678 |
| BstSNI | TACGTA | 1 cut(s) | 2096 |
| BstUI | CGCG | 3 cut(s) | 30, 293, 325 |
| BstV2I | GAAGAC | 5 cut(s) | 1222, 1551, 4057, 4085, 4210 |
| BstX2I | RGATCY | 5 cut(s) | 1839, 2221, 3532, 4302, 4966 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 967, 1606, 2216 |
| BstYI | RGATCY | 5 cut(s) | 1839, 2221, 3532, 4302, 4966 |
| BstZ17I | GTATAC | 1 cut(s) | 5037 |
| BstZI | CGGCCG | 1 cut(s) | 98 |
| BtgI | CCRYGG | 2 cut(s) | 3102, 4375 |
| BtgZI | GCGATG | 2 cut(s) | 1829, 4126 |
| BtrI | CACGTC | 3 cut(s) | 963, 3412, 4055 |
| BtsCI | GGATG | 8 cut(s) | 109, 559, 2545, 2958, 3112, 3421, 3562, 4924 |
| BtsI | GCAGTG | 4 cut(s) | 465, 1514, 1520, 4634 |
| BveI | ACCTGC | 4 cut(s) | 826, 1693, 4680, 5022 |
| Cac8I | GCNNGC | 7 cut(s) | 483, 648, 695, 3863, 4096, 4584, 4943 |
| CaiI | CAGNNNCTG | 3 cut(s) | 841, 4123, 4403 |
| CciI | TCATGA | 2 cut(s) | 1156, 3747 |
| CfoI | GCGC | 2 cut(s) | 32, 295 |
| Cfr10I | RCCGGY | 4 cut(s) | 96, 363, 405, 4578 |
| Cfr13I | GGNCC | 9 cut(s) | 17, 132, 286, 403, 483, 484, 838, 4246, 4758 |
| CseI | GACGC | 4 cut(s) | 203, 2626, 4770, 5100 |
| CsiI | ACCWGGT | 3 cut(s) | 1501, 1771, 2396 |
| Csp6I | GTAC | 9 cut(s) | 876, 1415, 2394, 2751, 3691, 4211, 4394, 4902, 4948 |
| CspAI | ACCGGT | 1 cut(s) | 363 |
| CviQI | GTAC | 9 cut(s) | 876, 1415, 2394, 2751, 3691, 4211, 4394, 4902, 4948 |
| DraI | TTTAAA | 2 cut(s) | 706, 1902 |
| DraIII | CACNNNGTG | 2 cut(s) | 1505, 2289 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1039 |
| DriI | GACNNNNNGTC | 1 cut(s) | 4825 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1039 |
| EaeI | YGGCCR | 6 cut(s) | 98, 969, 1750, 1950, 3213, 5163 |
| EagI | CGGCCG | 1 cut(s) | 98 |
| Eam1104I | CTCTTC | 2 cut(s) | 566, 5009 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 4825 |
| EarI | CTCTTC | 2 cut(s) | 566, 5009 |
| EciI | GGCGGA | 2 cut(s) | 29, 3618 |
| Ecl136II | GAGCTC | 2 cut(s) | 397, 4750 |
| EclXI | CGGCCG | 1 cut(s) | 98 |
| Eco105I | TACGTA | 1 cut(s) | 2096 |
| Eco130I | CCWWGG | 5 cut(s) | 1855, 2071, 2931, 3102, 4375 |
| Eco147I | AGGCCT | 1 cut(s) | 2106 |
| Eco24I | GRGCYC | 4 cut(s) | 399, 487, 4383, 4752 |
| Eco31I | GGTCTC | 2 cut(s) | 268, 4698 |
| Eco32I | GATATC | 2 cut(s) | 4014, 4721 |
| Eco47I | GGWCC | 5 cut(s) | 17, 286, 403, 838, 4246 |
| Eco52I | CGGCCG | 1 cut(s) | 98 |
| Eco53kI | GAGCTC | 2 cut(s) | 397, 4750 |
| Eco57I | CTGAAG | 5 cut(s) | 800, 1892, 1956, 3314, 4212 |
| Eco72I | CACGTG | 2 cut(s) | 716, 2810 |
| Eco88I | CYCGRG | 6 cut(s) | 136, 296, 389, 756, 2488, 4331 |
| EcoICRI | GAGCTC | 2 cut(s) | 397, 4750 |
| EcoO109I | RGGNCCY | 3 cut(s) | 132, 838, 4758 |
| EcoRI | GAATTC | 2 cut(s) | 738, 1057 |
| EcoRV | GATATC | 2 cut(s) | 4014, 4721 |
| EcoT14I | CCWWGG | 5 cut(s) | 1855, 2071, 2931, 3102, 4375 |
| EcoT38I | GRGCYC | 4 cut(s) | 399, 487, 4383, 4752 |
| ErhI | CCWWGG | 5 cut(s) | 1855, 2071, 2931, 3102, 4375 |
| Esp3I | CGTCTC | 1 cut(s) | 4163 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2160, 2192 |
| FaqI | GGGAC | 3 cut(s) | 1450, 2505, 4867 |
| FauI | CCCGC | 1 cut(s) | 474 |
| FauNDI | CATATG | 1 cut(s) | 4550 |
| FbaI | TGATCA | 4 cut(s) | 1194, 2497, 3513, 3912 |
| FblI | GTMKAC | 4 cut(s) | 118, 1090, 2666, 5036 |
| FokI | GGATG | 8 cut(s) | 116, 566, 2532, 2965, 3119, 3428, 3569, 4911 |
| FriOI | GRGCYC | 4 cut(s) | 399, 487, 4383, 4752 |
| FspBI | CTAG | 7 cut(s) | 1208, 1221, 1365, 2391, 2583, 3095, 3486 |
| GlaI | GCGC | 2 cut(s) | 31, 294 |
| GsaI | CCCAGC | 2 cut(s) | 835, 5101 |
| GsuI | CTGGAG | 4 cut(s) | 383, 3068, 4114, 4763 |
| HgaI | GACGC | 4 cut(s) | 203, 2626, 4770, 5100 |
| HhaI | GCGC | 2 cut(s) | 32, 295 |
| Hin1I | GRCGYC | 2 cut(s) | 195, 5111 |
| Hin6I | GCGC | 2 cut(s) | 30, 293 |
| HinP1I | GCGC | 2 cut(s) | 30, 293 |
| HincII | GTYRAC | 2 cut(s) | 119, 4264 |
| HindII | GTYRAC | 2 cut(s) | 119, 4264 |
| HindIII | AAGCTT | 2 cut(s) | 2914, 3798 |
| HphI | GGTGA | 6 cut(s) | 695, 1844, 2585, 2612, 3332, 4874 |
| Hpy99I | CGWCG | 6 cut(s) | 13, 120, 152, 197, 236, 967 |
| HpyCH4III | ACNGT | 8 cut(s) | 641, 882, 1088, 2021, 2189, 2786, 3073, 4036 |
| Hsp92I | GRCGYC | 2 cut(s) | 195, 5111 |
| HspAI | GCGC | 2 cut(s) | 30, 293 |
| KpnI | GGTACC | 1 cut(s) | 4397 |
| Ksp22I | TGATCA | 4 cut(s) | 1194, 2497, 3513, 3912 |
| LguI | GCTCTTC | 1 cut(s) | 5009 |
| MabI | ACCWGGT | 3 cut(s) | 1501, 1771, 2396 |
| MaeI | CTAG | 7 cut(s) | 1208, 1221, 1365, 2391, 2583, 3095, 3486 |
| MaeIII | GTNAC | 8 cut(s) | 170, 519, 979, 2638, 3117, 3407, 3933, 4199 |
| MfeI | CAATTG | 3 cut(s) | 1509, 3396, 5040 |
| MflI | RGATCY | 5 cut(s) | 1839, 2221, 3532, 4302, 4966 |
| MhlI | GDGCHC | 6 cut(s) | 156, 399, 487, 4383, 4678, 4752 |
| MlsI | TGGCCA | 2 cut(s) | 1952, 5165 |
| MluNI | TGGCCA | 2 cut(s) | 1952, 5165 |
| MlyI | GAGTC | 6 cut(s) | 541, 765, 1782, 2363, 4259, 4643 |
| MmeI | TCCRAC | 7 cut(s) | 186, 651, 1055, 2384, 3906, 4130, 4330 |
| Mox20I | TGGCCA | 2 cut(s) | 1952, 5165 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1297, 3743 |
| MscI | TGGCCA | 2 cut(s) | 1952, 5165 |
| MslI | CAYNNNNRTG | 5 cut(s) | 149, 1857, 1952, 2214, 4873 |
| Msp20I | TGGCCA | 2 cut(s) | 1952, 5165 |
| MspA1I | CMGCKG | 2 cut(s) | 1253, 2120 |
| MspCI | CTTAAG | 1 cut(s) | 2192 |
| MunI | CAATTG | 3 cut(s) | 1509, 3396, 5040 |
| Mva1269I | GAATGC | 4 cut(s) | 3711, 3745, 3991, 5138 |
| MvnI | CGCG | 3 cut(s) | 30, 293, 325 |
| NciI | CCSGG | 4 cut(s) | 335, 4906, 4952, 5024 |
| NcoI | CCATGG | 2 cut(s) | 3102, 4375 |
| NdeI | CATATG | 1 cut(s) | 4550 |
| NmeAIII | GCCGAG | 2 cut(s) | 2032, 4918 |
| NmuCI | GTSAC | 2 cut(s) | 2638, 3407 |
| NspI | RCATGY | 4 cut(s) | 2537, 4887, 4902, 5012 |
| NspV | TTCGAA | 1 cut(s) | 515 |
| OliI | CACNNNNGTG | 1 cut(s) | 1857 |
| PaeR7I | CTCGAG | 2 cut(s) | 296, 389 |
| PagI | TCATGA | 2 cut(s) | 1156, 3747 |
| PceI | AGGCCT | 1 cut(s) | 2106 |
| PciI | ACATGT | 3 cut(s) | 2533, 4898, 5008 |
| PciSI | GCTCTTC | 1 cut(s) | 5009 |
| PctI | GAATGC | 4 cut(s) | 3711, 3745, 3991, 5138 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1297, 3743 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1526, 2338 |
| PfoI | TCCNGGA | 2 cut(s) | 399, 3588 |
| PinAI | ACCGGT | 1 cut(s) | 363 |
| PleI | GAGTC | 6 cut(s) | 541, 765, 1782, 2362, 4259, 4642 |
| PmaCI | CACGTG | 2 cut(s) | 716, 2810 |
| PmlI | CACGTG | 2 cut(s) | 716, 2810 |
| PpsI | GAGTC | 6 cut(s) | 541, 765, 1782, 2362, 4259, 4642 |
| Ppu21I | YACGTR | 3 cut(s) | 716, 2096, 2810 |
| PpuMI | RGGWCCY | 1 cut(s) | 838 |
| PscI | ACATGT | 3 cut(s) | 2533, 4898, 5008 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1086 |
| PshBI | ATTAAT | 2 cut(s) | 2066, 2307 |
| PsiI | TTATAA | 2 cut(s) | 1238, 2082 |
| Psp124BI | GAGCTC | 2 cut(s) | 399, 4752 |
| Psp5II | RGGWCCY | 1 cut(s) | 838 |
| PspCI | CACGTG | 2 cut(s) | 716, 2810 |
| PspFI | CCCAGC | 2 cut(s) | 831, 5097 |
| PspOMI | GGGCCC | 1 cut(s) | 483 |
| PspPI | GGNCC | 9 cut(s) | 17, 132, 286, 403, 483, 484, 838, 4246, 4758 |
| PspPPI | RGGWCCY | 1 cut(s) | 838 |
| PspXI | VCTCGAGB | 1 cut(s) | 296 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 4940, 4972 |
| PstI | CTGCAG | 2 cut(s) | 1098, 3710 |
| PstNI | CAGNNNCTG | 3 cut(s) | 841, 4123, 4403 |
| PsuI | RGATCY | 5 cut(s) | 1839, 2221, 3532, 4302, 4966 |
| PvuII | CAGCTG | 2 cut(s) | 1253, 2120 |
| RsaI | GTAC | 9 cut(s) | 877, 1416, 2395, 2752, 3692, 4212, 4395, 4903, 4949 |
| RsaNI | GTAC | 9 cut(s) | 876, 1415, 2394, 2751, 3691, 4211, 4394, 4902, 4948 |
| RseI | CAYNNNNRTG | 5 cut(s) | 149, 1857, 1952, 2214, 4873 |
| SacI | GAGCTC | 2 cut(s) | 399, 4752 |
| SalI | GTCGAC | 1 cut(s) | 117 |
| SapI | GCTCTTC | 1 cut(s) | 5009 |
| Sau96I | GGNCC | 9 cut(s) | 17, 132, 286, 403, 483, 484, 838, 4246, 4758 |
| ScaI | AGTACT | 1 cut(s) | 2752 |
| SchI | GAGTC | 6 cut(s) | 541, 765, 1782, 2363, 4259, 4643 |
| SduI | GDGCHC | 6 cut(s) | 156, 399, 487, 4383, 4678, 4752 |
| SexAI | ACCWGGT | 3 cut(s) | 1501, 1771, 2396 |
| SfcI | CTRYAG | 6 cut(s) | 1094, 3618, 3706, 4000, 4160, 4798 |
| Sfr274I | CTCGAG | 2 cut(s) | 296, 389 |
| SfuI | TTCGAA | 1 cut(s) | 515 |
| SinI | GGWCC | 5 cut(s) | 17, 286, 403, 838, 4246 |
| SlaI | CTCGAG | 2 cut(s) | 296, 389 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 149, 1857, 1952, 2214, 4873 |
| SmlI | CTYRAG | 4 cut(s) | 296, 389, 2192, 2268 |
| SmoI | CTYRAG | 4 cut(s) | 296, 389, 2192, 2268 |
| SnaBI | TACGTA | 1 cut(s) | 2096 |
| SseBI | AGGCCT | 1 cut(s) | 2106 |
| SspI | AATATT | 4 cut(s) | 1071, 2438, 2627, 4483 |
| SspMI | CTAG | 7 cut(s) | 1208, 1221, 1365, 2391, 2583, 3095, 3486 |
| SstI | GAGCTC | 2 cut(s) | 399, 4752 |
| StuI | AGGCCT | 1 cut(s) | 2106 |
| StyI | CCWWGG | 5 cut(s) | 1855, 2071, 2931, 3102, 4375 |
| TaaI | ACNGT | 8 cut(s) | 641, 882, 1088, 2021, 2189, 2786, 3073, 4036 |
| TatI | WGTACW | 3 cut(s) | 875, 2750, 4210 |
| TauI | GCSGC | 3 cut(s) | 55, 328, 3794 |
| TseFI | GTSAC | 2 cut(s) | 2638, 3407 |
| Tsp45I | GTSAC | 2 cut(s) | 2638, 3407 |
| TspGWI | ACGGA | 4 cut(s) | 440, 1781, 1832, 5133 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1526, 2338 |
| Vha464I | CTTAAG | 1 cut(s) | 2192 |
| VneI | GTGCAC | 1 cut(s) | 4674 |
| VpaK11BI | GGWCC | 5 cut(s) | 17, 286, 403, 838, 4246 |
| VspI | ATTAAT | 2 cut(s) | 2066, 2307 |
| XceI | RCATGY | 4 cut(s) | 2537, 4887, 4902, 5012 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 540, 1571 |
| XhoI | CTCGAG | 2 cut(s) | 296, 389 |
| XmiI | GTMKAC | 4 cut(s) | 118, 1090, 2666, 5036 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1297, 3743 |
| XspI | CTAG | 7 cut(s) | 1208, 1221, 1365, 2391, 2583, 3095, 3486 |
| ZrmI | AGTACT | 1 cut(s) | 2752 |