AT5G22850

Belongs to the peptidase A1 family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Reverse (-)
7633373 .. 7636576
3204 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G22850.1

Sequence Viewer

Length: 1482 bp
ATGGCCGCTATTCGTTTTGCGGCGGCGATTCTGATTTGCTGTTTATTACCGGCGGCGGTTTTGTCTTACGGTTTCCCGGCGGCGTTGAAACTTGAAAGAGTTATTCCAGCGAATCACGAAATGGAACTTAGTCAGCTCAAGGCTCGTGATGAAGCTAGACACGGCAGATTGTTACAGTCTTTAGGTGGAGTCATAGATTTTCCCGTGGACGGAACTTTTGATCCTTTCGTTGTTGGACTGTACTACACGAAACTACGATTAGGAACTCCTCCAAGAGATTTTTATGTACAGGTTGATACAGGAAGTGATGTTTTGTGGGTTAGTTGTGCTTCTTGTAATGGCTGTCCTCAAACCAGTGGACTCCAAATTCAGTTGAATTTCTTTGATCCAGGGAGCTCTGTAACAGCATCACCGATTTCATGTTCTGATCAAAGATGCAGTTGGGGTATTCAGTCTTCTGATTCAGGCTGTTCTGTTCAGAACAACCTTTGTGCTTACACGTTTCAGTATGGGGATGGAAGTGGCACTTCAGGGTTCTACGTATCTGATGTCTTGCAATTTGATATGATTGTGGGAAGCTCTCTGGTCCCAAACTCAACGGCTCCGGTTGTGTTTGGTTGCAGCACCTCTCAGACGGGAGATTTAGTGAAGTCTGATAGAGCGGTTGATGGAATCTTCGGGTTTGGGCAGCAAGGAATGTCTGTCATTTCTCAGCTTGCTTCACAGGGAATAGCTCCAAGAGTGTTCTCTCACTGCTTGAAAGGAGAGAATGGAGGCGGAGGCATATTGGTTCTTGGAGAGATTGTGGAGCCAAACATGGTCTTTACTCCACTTGTTCCCTCACAGCCTCATTACAATGTGAATCTGCTGAGCATCTCAGTAAATGGCCAAGCTTTACCTATCAATCCATCGGTCTTCTCTACATCAAACGGCCAGGGAACAATCATTGACACTGGTACAACATTGGCATACCTTTCTGAAGCAGCCTATGTTCCTTTCGTTGAAGCTATTACAAATGCTGTTTCGCAGTCTGTCAGACCCGTTGTTTCGAAAGGGAACCAATGTTACGTAATAACCACAAGTGTCGGAGACATATTTCCTCCAGTTAGCTTGAACTTTGCTGGTGGAGCATCTATGTTCTTGAATCCTCAGGATTACCTCATACAGCAGAACAATGTCGGAGGTACTGCAGTGTGGTGCATCGGTTTTCAAAGGATACAGAATCAAGGGATAACGATCCTTGGAGATTTGGTTCTTAAAGACAAGATCTTTGTCTATGATCTGGTCGGTCAGAGAATCGGATGGGCAAACTACGACTGTTCGACGTCGGTAAATGTCTCAGCGACTAGCAGCAGCGGAAGAAGCGAATATGTGAACGCAGGACAGTTTAGTGAGAATGCTGCAGCACCGCAGAAGTTATCTTTGGACATTGTTGGAAACACTCTAATGTTGTTACTAATGGTAATCAACATGTTCTTATAG

Protein Analysis

493

Amino Acids

52.34

Weight (kDa)

4.71

Isoelectric Point (pI)

34.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TAXi_N PF14543 81 - 266 5.9e-42 Xylanase inhibitor N-terminal
Asp PF00026 81 - 437 2.1e-31 Eukaryotic aspartyl protease
TAXi_C PF14541 284 - 436 2.5e-28 Xylanase inhibitor C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1328
AccBSI CCGCTC 1 cut(s) 662
AclWI GGATC 3 cut(s) 215, 380, 1231
AcoI YGGCCR 3 cut(s) 3, 886, 931
AcsI RAATTY 2 cut(s) 366, 376
AcuI CTGAAG 2 cut(s) 513, 999
AcyI GRCGYC 1 cut(s) 1325
AfaI GTAC 4 cut(s) 242, 288, 958, 1186
AfiI CCNNNNNNNGG 1 cut(s) 209
AflIII ACRYGT 2 cut(s) 498, 1470
AgsI TTSAA 8 cut(s) 88, 95, 376, 760, 1004, 1114, 1144, 1211
AjnI CCWGG 2 cut(s) 388, 933
AjuI GAANNNNNNNTTGG 2 cut(s) 1406, 1438
AloI GAACNNNNNNTCC 4 cut(s) 205, 237, 1236, 1268
AluBI AGCT 9 cut(s) 136, 155, 396, 579, 715, 734, 893, 1007, 1110
AluI AGCT 9 cut(s) 136, 155, 396, 579, 715, 734, 893, 1007, 1110
Alw21I GWGCWC 1 cut(s) 398
Alw26I GTCTC 2 cut(s) 1083, 1342
AlwI GGATC 3 cut(s) 215, 380, 1231
AoxI GGCC 3 cut(s) 3, 886, 931
ApeKI GCWGC 7 cut(s) 621, 688, 983, 1350, 1353, 1400, 1403
ApoI RAATTY 2 cut(s) 366, 376
ArsI GACNNNNNNTTYG 4 cut(s) 200, 232, 1253, 1285
AspS9I GGNCC 1 cut(s) 586
AsuC2I CCSGG 1 cut(s) 77
AsuHPI GGTGA 1 cut(s) 402
AsuII TTCGAA 1 cut(s) 1049
AvaII GGWCC 1 cut(s) 586
AxyI CCTNAGG 1 cut(s) 1149
BaeI ACNNNNGTAYC 2 cut(s) 1176, 1209
BalI TGGCCA 1 cut(s) 888
BanII GRGCYC 1 cut(s) 398
BarI GAAGNNNNNNTAC 2 cut(s) 439, 471
BauI CACGAG 1 cut(s) 144
BbsI GAAGAC 2 cut(s) 447, 907
Bbv12I GWGCWC 1 cut(s) 398
BbvI GCAGC 7 cut(s) 633, 700, 995, 1362, 1365, 1387, 1415
BccI CCATC 4 cut(s) 509, 662, 916, 1296
BceAI ACGGC 3 cut(s) 178, 615, 946
BciT130I CCWGG 2 cut(s) 390, 935
BciVI GTATCC 1 cut(s) 1209
BclI TGATCA 1 cut(s) 427
BcnI CCSGG 1 cut(s) 77
BcoDI GTCTC 2 cut(s) 1083, 1342
BfaI CTAG 2 cut(s) 156, 1347
BfmI CTRYAG 2 cut(s) 1188, 1401
BfuI GTATCC 1 cut(s) 1209
BglII AGATCT 1 cut(s) 1266
BlpI GCTNAGC 1 cut(s) 869
Bme1390I CCNGG 3 cut(s) 77, 390, 935
Bme18I GGWCC 1 cut(s) 586
BmgT120I GGNCC 1 cut(s) 586
BmiI GGNNCC 4 cut(s) 588, 603, 810, 1058
BmrFI CCNGG 3 cut(s) 77, 390, 935
BmsI GCATC 5 cut(s) 416, 425, 882, 1139, 1209
BpiI GAAGAC 2 cut(s) 447, 907
BpmI CTGGAG 1 cut(s) 1086
Bpu1102I GCTNAGC 1 cut(s) 869
Bpu14I TTCGAA 1 cut(s) 1049
BpuEI CTTGAG 1 cut(s) 122
BpuMI CCSGG 1 cut(s) 77
BsaAI YACGTR 2 cut(s) 541, 1069
BsaBI GATNNNNATC 1 cut(s) 1235
BsaHI GRCGYC 1 cut(s) 1325
BsaJI CCNNGG 4 cut(s) 204, 389, 934, 1240
BsaWI WCCGGW 1 cut(s) 604
BsaXI ACNNNNNCTCC 6 cut(s) 630, 660, 789, 819, 1236, 1266
Bsc4I CCNNNNNNNGG 1 cut(s) 209
Bse118I RCCGGY 1 cut(s) 49
Bse1I ACTGG 3 cut(s) 354, 958, 1103
Bse21I CCTNAGG 1 cut(s) 1149
Bse8I GATNNNNATC 1 cut(s) 1235
BseBI CCWGG 2 cut(s) 390, 935
BseDI CCNNGG 4 cut(s) 204, 389, 934, 1240
BseGI GGATG 2 cut(s) 520, 1307
BseJI GATNNNNATC 1 cut(s) 1235
BseLI CCNNNNNNNGG 1 cut(s) 209
BseMII CTCAG 6 cut(s) 644, 725, 860, 891, 1163, 1353
BseNI ACTGG 3 cut(s) 354, 958, 1103
BseRI GAGGAG 1 cut(s) 258
BseXI GCAGC 7 cut(s) 633, 700, 995, 1362, 1365, 1387, 1415
BshFI GGCC 3 cut(s) 5, 888, 933
BsiHKAI GWGCWC 1 cut(s) 398
BsiSI CCGG 3 cut(s) 50, 77, 605
BslFI GGGAC 1 cut(s) 572
BslI CCNNNNNNNGG 1 cut(s) 209
BsmAI GTCTC 2 cut(s) 1083, 1342
BsmFI GGGAC 1 cut(s) 572
BsmI GAATGC 1 cut(s) 1402
BsnI GGCC 3 cut(s) 5, 888, 933
Bsp119I TTCGAA 1 cut(s) 1049
Bsp1286I GDGCHC 1 cut(s) 398
Bsp1407I TGTACA 1 cut(s) 286
Bsp143I GATC 6 cut(s) 220, 385, 427, 1236, 1266, 1279
Bsp1720I GCTNAGC 1 cut(s) 869
BspANI GGCC 3 cut(s) 5, 888, 933
BspCNI CTCAG 6 cut(s) 643, 724, 861, 890, 1162, 1352
BspLI GGNNCC 4 cut(s) 588, 603, 810, 1058
BspMAI CTGCAG 2 cut(s) 1192, 1405
BspPI GGATC 3 cut(s) 215, 380, 1231
BspT104I TTCGAA 1 cut(s) 1049
BsrBI CCGCTC 1 cut(s) 662
BsrFI RCCGGY 1 cut(s) 49
BsrGI TGTACA 1 cut(s) 286
BsrI ACTGG 3 cut(s) 354, 958, 1103
BssAI RCCGGY 1 cut(s) 49
BssECI CCNNGG 4 cut(s) 204, 389, 934, 1240
BssMI GATC 6 cut(s) 220, 385, 427, 1236, 1266, 1279
BssNI GRCGYC 1 cut(s) 1325
BssSI CACGAG 1 cut(s) 144
BssT1I CCWWGG 1 cut(s) 1240
Bst2BI CACGAG 1 cut(s) 144
Bst2UI CCWGG 2 cut(s) 390, 935
Bst4CI ACNGT 5 cut(s) 71, 177, 240, 1319, 1386
BstACI GRCGYC 1 cut(s) 1325
BstAUI TGTACA 1 cut(s) 286
BstBAI YACGTR 2 cut(s) 541, 1069
BstBI TTCGAA 1 cut(s) 1049
BstC8I GCNNGC 1 cut(s) 717
BstDEI CTNAG 7 cut(s) 128, 630, 711, 869, 877, 1149, 1339
BstDSI CCRYGG 1 cut(s) 204
BstF5I GGATG 2 cut(s) 520, 1307
BstKTI GATC 6 cut(s) 223, 388, 430, 1239, 1269, 1282
BstMAI GTCTC 2 cut(s) 1083, 1342
BstMBI GATC 6 cut(s) 220, 385, 427, 1236, 1266, 1279
BstMWI GCNNNNNNNGC 2 cut(s) 1127, 1362
BstNI CCWGG 2 cut(s) 390, 935
BstNSI RCATGY 1 cut(s) 1474
BstSCI CCNGG 3 cut(s) 75, 388, 933
BstSFI CTRYAG 2 cut(s) 1188, 1401
BstSNI TACGTA 2 cut(s) 541, 1069
BstV1I GCAGC 7 cut(s) 633, 700, 995, 1362, 1365, 1387, 1415
BstV2I GAAGAC 2 cut(s) 447, 907
BstX2I RGATCY 1 cut(s) 1266
BstYI RGATCY 1 cut(s) 1266
Bsu36I CCTNAGG 1 cut(s) 1149
BsuI GTATCC 1 cut(s) 1209
BsuRI GGCC 3 cut(s) 5, 888, 933
BtgI CCRYGG 1 cut(s) 204
BtsCI GGATG 2 cut(s) 520, 1307
BtsI GCAGTG 2 cut(s) 751, 1197
BtsIMutI CAGTG 4 cut(s) 361, 751, 951, 1197
Cac8I GCNNGC 1 cut(s) 717
Cfr10I RCCGGY 1 cut(s) 49
Cfr13I GGNCC 1 cut(s) 586
Csp6I GTAC 4 cut(s) 241, 287, 957, 1185
CviAII CATG 3 cut(s) 420, 817, 1471
CviQI GTAC 4 cut(s) 241, 287, 957, 1185
DdeI CTNAG 7 cut(s) 128, 630, 711, 869, 877, 1149, 1339
DpnI GATC 6 cut(s) 222, 387, 429, 1238, 1268, 1281
DpnII GATC 6 cut(s) 220, 385, 427, 1236, 1266, 1279
EaeI YGGCCR 3 cut(s) 3, 886, 931
EciI GGCGGA 1 cut(s) 792
Ecl136II GAGCTC 1 cut(s) 396
Eco105I TACGTA 2 cut(s) 541, 1069
Eco130I CCWWGG 1 cut(s) 1240
Eco24I GRGCYC 1 cut(s) 398
Eco47I GGWCC 1 cut(s) 586
Eco53kI GAGCTC 1 cut(s) 396
Eco57I CTGAAG 2 cut(s) 513, 999
Eco81I CCTNAGG 1 cut(s) 1149
EcoICRI GAGCTC 1 cut(s) 396
EcoRII CCWGG 2 cut(s) 388, 933
EcoT14I CCWWGG 1 cut(s) 1240
EcoT38I GRGCYC 1 cut(s) 398
ErhI CCWWGG 1 cut(s) 1240
FaeI CATG 3 cut(s) 423, 820, 1474
FalI AAGNNNNNCTT 2 cut(s) 511, 543
FaqI GGGAC 1 cut(s) 572
FatI CATG 3 cut(s) 419, 816, 1470
FbaI TGATCA 1 cut(s) 427
FokI GGATG 2 cut(s) 527, 1314
FriOI GRGCYC 1 cut(s) 398
FspBI CTAG 2 cut(s) 156, 1347
GsuI CTGGAG 1 cut(s) 1086
HaeIII GGCC 3 cut(s) 5, 888, 933
HapII CCGG 3 cut(s) 50, 77, 605
Hin1I GRCGYC 1 cut(s) 1325
Hin1II CATG 3 cut(s) 423, 820, 1474
HindIII AAGCTT 1 cut(s) 891
HpaII CCGG 3 cut(s) 50, 77, 605
HphI GGTGA 1 cut(s) 402
Hpy166II GTNNAC 3 cut(s) 208, 359, 1375
Hpy188III TCNNGA 4 cut(s) 116, 146, 1141, 1151
Hpy8I GTNNAC 3 cut(s) 208, 359, 1375
Hpy99I CGWCG 2 cut(s) 1327, 1330
HpyCH4III ACNGT 5 cut(s) 71, 177, 240, 1319, 1386
HpyCH4IV ACGT 4 cut(s) 500, 540, 1068, 1325
HpyCH4V TGCA 6 cut(s) 438, 556, 621, 1190, 1200, 1403
HpyF10VI GCNNNNNNNGC 2 cut(s) 1127, 1362
HpyF3I CTNAG 7 cut(s) 128, 630, 711, 869, 877, 1149, 1339
HpySE526I ACGT 4 cut(s) 500, 540, 1068, 1325
Hsp92I GRCGYC 1 cut(s) 1325
Hsp92II CATG 3 cut(s) 423, 820, 1474
Ksp22I TGATCA 1 cut(s) 427
Kzo9I GATC 6 cut(s) 220, 385, 427, 1236, 1266, 1279
LmnI GCTCC 5 cut(s) 393, 607, 739, 808, 1127
Lsp1109I GCAGC 7 cut(s) 633, 700, 995, 1362, 1365, 1387, 1415
LweI GCATC 5 cut(s) 416, 425, 882, 1139, 1209
MaeI CTAG 2 cut(s) 156, 1347
MaeII ACGT 4 cut(s) 500, 540, 1068, 1325
MaeIII GTNAC 4 cut(s) 171, 400, 1064, 1452
MalI GATC 6 cut(s) 222, 387, 429, 1238, 1268, 1281
MbiI CCGCTC 1 cut(s) 662
MboI GATC 6 cut(s) 220, 385, 427, 1236, 1266, 1279
MboII GAAGA 4 cut(s) 447, 667, 907, 1371
MflI RGATCY 1 cut(s) 1266
MhlI GDGCHC 1 cut(s) 398
MlsI TGGCCA 1 cut(s) 888
MluCI AATT 3 cut(s) 366, 376, 557
MluNI TGGCCA 1 cut(s) 888
MlyI GAGTC 2 cut(s) 198, 354
MmeI TCCRAC 4 cut(s) 214, 1066, 1159, 1414
Mox20I TGGCCA 1 cut(s) 888
MscI TGGCCA 1 cut(s) 888
MseI TTAA 1 cut(s) 1257
MslI CAYNNNNRTG 2 cut(s) 855, 1445
Msp20I TGGCCA 1 cut(s) 888
MspA1I CMGCKG 1 cut(s) 1356
MspI CCGG 3 cut(s) 50, 77, 605
MspR9I CCNGG 3 cut(s) 77, 390, 935
Mva1269I GAATGC 1 cut(s) 1402
MvaI CCWGG 2 cut(s) 390, 935
MwoI GCNNNNNNNGC 2 cut(s) 1127, 1362
NciI CCSGG 1 cut(s) 77
NdeII GATC 6 cut(s) 220, 385, 427, 1236, 1266, 1279
NlaIII CATG 3 cut(s) 423, 820, 1474
NlaIV GGNNCC 4 cut(s) 588, 603, 810, 1058
NspI RCATGY 1 cut(s) 1474
NspV TTCGAA 1 cut(s) 1049
PciI ACATGT 1 cut(s) 1470
PctI GAATGC 1 cut(s) 1402
PfeI GAWTC 8 cut(s) 28, 112, 461, 672, 862, 1144, 1222, 1296
PleI GAGTC 2 cut(s) 197, 354
PpsI GAGTC 2 cut(s) 197, 354
Ppu21I YACGTR 2 cut(s) 541, 1069
PscI ACATGT 1 cut(s) 1470
Psp124BI GAGCTC 1 cut(s) 398
Psp6I CCWGG 2 cut(s) 388, 933
PspGI CCWGG 2 cut(s) 388, 933
PspN4I GGNNCC 4 cut(s) 588, 603, 810, 1058
PspPI GGNCC 1 cut(s) 586
PsrI GAACNNNNNNTAC 2 cut(s) 1049, 1081
PstI CTGCAG 2 cut(s) 1192, 1405
PsuI RGATCY 1 cut(s) 1266
RsaI GTAC 4 cut(s) 242, 288, 958, 1186
RsaNI GTAC 4 cut(s) 241, 287, 957, 1185
RseI CAYNNNNRTG 2 cut(s) 855, 1445
SacI GAGCTC 1 cut(s) 398
SaqAI TTAA 1 cut(s) 1257
Sau3AI GATC 6 cut(s) 220, 385, 427, 1236, 1266, 1279
Sau96I GGNCC 1 cut(s) 586
SchI GAGTC 2 cut(s) 198, 354
ScrFI CCNGG 3 cut(s) 77, 390, 935
SduI GDGCHC 1 cut(s) 398
SfaNI GCATC 5 cut(s) 416, 425, 882, 1139, 1209
SfcI CTRYAG 2 cut(s) 1188, 1401
SfuI TTCGAA 1 cut(s) 1049
SinI GGWCC 1 cut(s) 586
SmiMI CAYNNNNRTG 2 cut(s) 855, 1445
SmlI CTYRAG 1 cut(s) 137
SmoI CTYRAG 1 cut(s) 137
SnaBI TACGTA 2 cut(s) 541, 1069
Sse9I AATT 3 cut(s) 366, 376, 557
SspMI CTAG 2 cut(s) 156, 1347
SstI GAGCTC 1 cut(s) 398
StyD4I CCNGG 3 cut(s) 75, 388, 933
StyI CCWWGG 1 cut(s) 1240
TaaI ACNGT 5 cut(s) 71, 177, 240, 1319, 1386
TaiI ACGT 4 cut(s) 503, 543, 1071, 1328
TaqI TCGA 2 cut(s) 1049, 1322
TaqII GACCGA 2 cut(s) 901, 1277
TasI AATT 3 cut(s) 366, 376, 557
TatI WGTACW 2 cut(s) 240, 286
TauI GCSGC 5 cut(s) 8, 23, 26, 56, 83
TfiI GAWTC 8 cut(s) 28, 112, 461, 672, 862, 1144, 1222, 1296
Tru1I TTAA 1 cut(s) 1257
Tru9I TTAA 1 cut(s) 1257
TscAI CASTG 4 cut(s) 361, 758, 958, 1197
TseI GCWGC 7 cut(s) 621, 688, 983, 1350, 1353, 1400, 1403
TspDTI ATGAA 2 cut(s) 165, 408
TspGWI ACGGA 1 cut(s) 225
TspRI CASTG 4 cut(s) 361, 758, 958, 1197
VpaK11BI GGWCC 1 cut(s) 586
XapI RAATTY 2 cut(s) 366, 376
XceI RCATGY 1 cut(s) 1474
XspI CTAG 2 cut(s) 156, 1347
ZraI GACGTC 1 cut(s) 1326
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.