Prupe.2G031400_v2.0.a1

Belongs to the peptidase A1 family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
3398219 .. 3402772
4554 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G031400.1

Sequence Viewer

Length: 1509 bp
ATGGCGGCAACTTTTCTGGGAAAGCTTTTGATCACTGCCGCGGTACTGCTGCCTTCTGCGGTGGTTCTGTGCAGTTTCCCCGCCACTCTGACTCTGGAGAGAGCTTTTCCAACAAACCACAGAGTGGAACTGAGTCAACTCAGAGCTAGAGACCGAGTCCGGCATGGAAGGATGTTGCAGCAGTCCTCTAGCGGCGGTGGCGGTGTCATCAATTTCCCCGTTGGAGGGACCTTCGATCCATACATAGTTGGGCTTTATTTCACAAGTGTGAAGTTGGGTACACCTGCAACAGAGTTTTATGTGCAGATTGATACTGGAAGTGATGTTTTGTGGGTTGGCTGCAATTCCTGCAATGGTTGCCCCAAATCAACTGGACTTAAAATTCAGCTGAAATCTTTTGACCCTAAAAGCTCATCAACTGCCTCATTGGTGTCTTGTTCTGATAAAATATGCTCCCTTGGACTTCAGACACAAGATTCTAGCTGTGATGCAAAGGATAAGCAGTGTACTTATGGGTTCAAGTACGGTGATGGCAGTGGAACATCGGGCTATTATGTATCAGACTTGTTGCATTTTGACACAGCTGGCGGTGGTCAGTCTGTCACCTCAAACTCTTCAGCTAACATTGTCTTTGGGTGTAGCACCTCAGCAACCGGGGTCTTGCAGAAAACAGATAGAGCAGTTGATGGGATTTTTGGATTTGGACAGCAGGAATTTTCTGTCATCTCACAGCTGTCTTCACAGGGAGTAGCACCAAATGTATTTTCGCACTGCTTCAAAGGAGATGACACTGGTGGGGGGATACTGGTTCTTGGTGAGATCGTGGATCCTAACATCGTTTATAGCCCGCTTGTCCAAAATCAGCCTCATTATAACTTAAATCTGGAGAGCATTAGTGTTAACGGCCAAACGCTAGCCATTGATCCATCAGTTTTTTCAACATCAAGCAACCAAGGAACAATAGTTGATTCTGGGACAACTTTGGCATACCTTGCAGAAGATGCATATGATCCTTTTGTCAATGCTATAACAAGCGCTGTCTCACAATCTGTGACCCCTGTTACCTCCCAGGGAGAACAATGCTACATAGTCACATCCAGCATCACTGATATATTTCCTCAAGTTAGCTTGAACTTTGCTGGTAATGCATCCATGATTCTGAGACCGGAGGACTACCTTTTGCAGCAGAATTCTGTAAGTGGTGATGAAGTTTGGTGCATTGGCATCCAGAAAAGTGACGGTCAAGATATAACTGTATTGGGAGACCTCATCCTGAAAGACAAAATCATTGTCTATGATTTGGCCAATCAAAGGATTGGTTGGACTCAATATGACTGTTCAACATCAGTCAGTGTCTCTACAAATACTAGCAAAGGAACTGCATCTGTTAATGCAGGGTCCATAAACGTTAGCAGTTCAGCGTGCAGCGAGCCTTTCAAGCTTGTACCGATAAGCATGGTGGCTTTCCTTGTTCACATATCAGTCATTTACATTTTCCCATTCTTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

503

Amino Acids

53.16

Weight (kDa)

4.77

Isoelectric Point (pI)

37.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 873
AarI CACCTGC 1 cut(s) 292
Acc36I ACCTGC 1 cut(s) 292
AccB7I CCANNNNNTGG 1 cut(s) 124
AccII CGCG 1 cut(s) 41
AclI AACGTT 1 cut(s) 1407
AclWI GGATC 5 cut(s) 230, 821, 834, 917, 1004
AcoI YGGCCR 2 cut(s) 904, 1302
AcsI RAATTY 3 cut(s) 381, 713, 1189
AcuI CTGAAG 2 cut(s) 449, 600
AdeI CACNNNGTG 1 cut(s) 124
AfaI GTAC 5 cut(s) 45, 280, 508, 524, 1446
AfeI AGCGCT 1 cut(s) 1036
AfiI CCNNNNNNNGG 4 cut(s) 124, 224, 225, 1311
AgsI TTSAA 6 cut(s) 520, 778, 939, 1132, 1341, 1438
AjnI CCWGG 1 cut(s) 1068
AjuI GAANNNNNNNTTGG 2 cut(s) 748, 780
AleI CACNNNNGTG 1 cut(s) 266
Alw26I GTCTC 5 cut(s) 144, 1045, 1156, 1257, 1360
AlwI GGATC 5 cut(s) 230, 821, 834, 917, 1004
Aor51HI AGCGCT 1 cut(s) 1036
AoxI GGCC 2 cut(s) 904, 1302
ApeKI GCWGC 5 cut(s) 49, 178, 339, 1183, 1425
ApoI RAATTY 3 cut(s) 381, 713, 1189
ArsI GACNNNNNNTTYG 2 cut(s) 1275, 1307
AspLEI GCGC 1 cut(s) 1037
AspS9I GGNCC 2 cut(s) 228, 1398
AsuC2I CCSGG 1 cut(s) 655
AsuHPI GGTGA 4 cut(s) 539, 595, 827, 1214
AsuNHI GCTAGC 1 cut(s) 913
AvaII GGWCC 2 cut(s) 228, 1398
BalI TGGCCA 1 cut(s) 1304
BamHI GGATCC 1 cut(s) 826
BbsI GAAGAC 1 cut(s) 729
BbvCI CCTCAGC 1 cut(s) 646
BbvI GCAGC 5 cut(s) 36, 190, 326, 1195, 1437
BccI CCATC 3 cut(s) 524, 680, 934
BceAI ACGGC 1 cut(s) 919
BciT130I CCWGG 1 cut(s) 1070
BciVI GTATCC 1 cut(s) 795
BclI TGATCA 1 cut(s) 30
BcnI CCSGG 1 cut(s) 655
BcoDI GTCTC 5 cut(s) 144, 1045, 1156, 1257, 1360
BfaI CTAG 5 cut(s) 147, 189, 480, 914, 1368
BfoI RGCGCY 1 cut(s) 1038
BfuAI ACCTGC 1 cut(s) 292
BfuI GTATCC 1 cut(s) 795
BisI GCNGC 8 cut(s) 6, 39, 50, 179, 193, 340, 1184, 1426
BlsI GCNGC 8 cut(s) 7, 40, 51, 180, 194, 341, 1185, 1427
Bme1390I CCNGG 2 cut(s) 655, 1070
Bme18I GGWCC 2 cut(s) 228, 1398
BmgT120I GGNCC 2 cut(s) 228, 1398
BmiI GGNNCC 3 cut(s) 229, 828, 1399
BmrFI CCNGG 2 cut(s) 655, 1070
BmsI GCATC 6 cut(s) 478, 991, 1110, 1157, 1233, 1391
BmtI GCTAGC 1 cut(s) 917
BpiI GAAGAC 1 cut(s) 729
BpmI CTGGAG 2 cut(s) 116, 905
Bpu10I CCTNAGC 1 cut(s) 646
BpuEI CTTGAG 1 cut(s) 1104
BpuMI CCSGG 1 cut(s) 655
BsaI GGTCTC 3 cut(s) 144, 1156, 1257
BsaJI CCNNGG 6 cut(s) 39, 457, 654, 952, 1068, 1069
BsaWI WCCGGW 1 cut(s) 1165
Bsc4I CCNNNNNNNGG 4 cut(s) 124, 224, 225, 1311
Bse1I ACTGG 4 cut(s) 319, 376, 796, 810
Bse3DI GCAATG 1 cut(s) 358
BseBI CCWGG 1 cut(s) 1070
BseDI CCNNGG 6 cut(s) 39, 457, 654, 952, 1068, 1069
BseGI GGATG 5 cut(s) 177, 1094, 1148, 1224, 1269
BseLI CCNNNNNNNGG 4 cut(s) 124, 224, 225, 1311
BseMI GCAATG 1 cut(s) 358
BseMII CTCAG 4 cut(s) 122, 154, 660, 1151
BseNI ACTGG 4 cut(s) 319, 376, 796, 810
BseXI GCAGC 5 cut(s) 36, 190, 326, 1195, 1437
BsgI GTGCAG 3 cut(s) 91, 323, 1444
Bsh1236I CGCG 1 cut(s) 41
BshFI GGCC 2 cut(s) 906, 1304
BsiSI CCGG 3 cut(s) 160, 654, 1166
BslFI GGGAC 2 cut(s) 241, 988
BslI CCNNNNNNNGG 4 cut(s) 124, 224, 225, 1311
BsmAI GTCTC 5 cut(s) 144, 1045, 1156, 1257, 1360
BsmFI GGGAC 2 cut(s) 241, 988
BsnI GGCC 2 cut(s) 906, 1304
Bso31I GGTCTC 3 cut(s) 144, 1156, 1257
Bsp143I GATC 6 cut(s) 30, 235, 819, 826, 922, 1009
BspANI GGCC 2 cut(s) 906, 1304
BspCNI CTCAG 4 cut(s) 123, 153, 659, 1152
BspFNI CGCG 1 cut(s) 41
BspLI GGNNCC 3 cut(s) 229, 828, 1399
BspMI ACCTGC 1 cut(s) 292
BspOI GCTAGC 1 cut(s) 917
BspPI GGATC 5 cut(s) 230, 821, 834, 917, 1004
BspTNI GGTCTC 3 cut(s) 144, 1156, 1257
BsrDI GCAATG 1 cut(s) 358
BsrI ACTGG 4 cut(s) 319, 376, 796, 810
BssECI CCNNGG 6 cut(s) 39, 457, 654, 952, 1068, 1069
BssMI GATC 6 cut(s) 30, 235, 819, 826, 922, 1009
BssT1I CCWWGG 2 cut(s) 457, 952
Bst2UI CCWGG 1 cut(s) 1070
Bst4CI ACNGT 4 cut(s) 527, 1241, 1255, 1337
Bst6I CTCTTC 1 cut(s) 619
BstAPI GCANNNNNTGC 4 cut(s) 348, 357, 992, 1001
BstC8I GCNNGC 5 cut(s) 586, 848, 915, 1423, 1430
BstDEI CTNAG 4 cut(s) 131, 140, 646, 1160
BstDSI CCRYGG 1 cut(s) 39
BstF5I GGATG 5 cut(s) 177, 1094, 1148, 1224, 1269
BstFNI CGCG 1 cut(s) 41
BstH2I RGCGCY 1 cut(s) 1038
BstHHI GCGC 1 cut(s) 1037
BstKTI GATC 6 cut(s) 33, 238, 822, 829, 925, 1012
BstMAI GTCTC 5 cut(s) 144, 1045, 1156, 1257, 1360
BstMBI GATC 6 cut(s) 30, 235, 819, 826, 922, 1009
BstMWI GCNNNNNNNGC 7 cut(s) 198, 348, 357, 992, 1001, 1145, 1438
BstNI CCWGG 1 cut(s) 1070
BstSCI CCNGG 2 cut(s) 653, 1068
BstUI CGCG 1 cut(s) 41
BstV1I GCAGC 5 cut(s) 36, 190, 326, 1195, 1437
BstV2I GAAGAC 1 cut(s) 729
BstX2I RGATCY 1 cut(s) 826
BstYI RGATCY 1 cut(s) 826
BsuI GTATCC 1 cut(s) 795
BsuRI GGCC 2 cut(s) 906, 1304
BtgI CCRYGG 1 cut(s) 39
BtsCI GGATG 5 cut(s) 177, 1094, 1148, 1224, 1269
BtsI GCAGTG 4 cut(s) 33, 509, 541, 769
BtsIMutI CAGTG 7 cut(s) 33, 509, 541, 769, 789, 1104, 1357
BveI ACCTGC 1 cut(s) 292
Cac8I GCNNGC 5 cut(s) 586, 848, 915, 1423, 1430
CfoI GCGC 1 cut(s) 1037
Cfr13I GGNCC 2 cut(s) 228, 1398
Cfr42I CCGCGG 1 cut(s) 42
Csp6I GTAC 5 cut(s) 44, 279, 507, 523, 1445
CviAII CATG 3 cut(s) 164, 1153, 1456
CviQI GTAC 5 cut(s) 44, 279, 507, 523, 1445
DdeI CTNAG 4 cut(s) 131, 140, 646, 1160
DpnI GATC 6 cut(s) 32, 237, 821, 828, 924, 1011
DpnII GATC 6 cut(s) 30, 235, 819, 826, 922, 1009
DraIII CACNNNGTG 1 cut(s) 124
EaeI YGGCCR 2 cut(s) 904, 1302
Eam1104I CTCTTC 1 cut(s) 619
EarI CTCTTC 1 cut(s) 619
Eco130I CCWWGG 2 cut(s) 457, 952
Eco31I GGTCTC 3 cut(s) 144, 1156, 1257
Eco47I GGWCC 2 cut(s) 228, 1398
Eco47III AGCGCT 1 cut(s) 1036
Eco57I CTGAAG 2 cut(s) 449, 600
EcoO109I RGGNCCY 1 cut(s) 228
EcoRI GAATTC 1 cut(s) 1189
EcoRII CCWGG 1 cut(s) 1068
EcoT14I CCWWGG 2 cut(s) 457, 952
EcoT22I ATGCAT 2 cut(s) 1006, 1150
ErhI CCWWGG 2 cut(s) 457, 952
FaeI CATG 3 cut(s) 167, 1156, 1459
FaqI GGGAC 2 cut(s) 241, 988
FatI CATG 3 cut(s) 163, 1152, 1455
FauI CCCGC 2 cut(s) 88, 855
FauNDI CATATG 1 cut(s) 1006
FbaI TGATCA 1 cut(s) 30
Fnu4HI GCNGC 8 cut(s) 6, 39, 50, 179, 193, 340, 1184, 1426
FokI GGATG 5 cut(s) 184, 1081, 1135, 1211, 1256
Fsp4HI GCNGC 8 cut(s) 6, 39, 50, 179, 193, 340, 1184, 1426
FspBI CTAG 5 cut(s) 147, 189, 480, 914, 1368
GlaI GCGC 1 cut(s) 1036
GluI GCNGC 8 cut(s) 6, 39, 50, 179, 193, 340, 1184, 1426
GsuI CTGGAG 2 cut(s) 116, 905
HaeII RGCGCY 1 cut(s) 1038
HaeIII GGCC 2 cut(s) 906, 1304
HapII CCGG 3 cut(s) 160, 654, 1166
HhaI GCGC 1 cut(s) 1037
Hin1II CATG 3 cut(s) 167, 1156, 1459
Hin6I GCGC 1 cut(s) 1035
HinP1I GCGC 1 cut(s) 1035
HincII GTYRAC 2 cut(s) 137, 901
HindII GTYRAC 2 cut(s) 137, 901
HindIII AAGCTT 2 cut(s) 23, 1439
HinfI GANTC 7 cut(s) 91, 133, 156, 476, 968, 1156, 1324
HpaI GTTAAC 1 cut(s) 901
HpaII CCGG 3 cut(s) 160, 654, 1166
HphI GGTGA 4 cut(s) 539, 595, 827, 1214
Hpy166II GTNNAC 5 cut(s) 137, 281, 507, 901, 1474
Hpy188I TCNGA 6 cut(s) 90, 143, 442, 468, 562, 1161
Hpy188III TCNNGA 5 cut(s) 95, 884, 1228, 1244, 1273
Hpy8I GTNNAC 5 cut(s) 137, 281, 507, 901, 1474
HpyAV CCTTC 3 cut(s) 63, 162, 241
HpyCH4III ACNGT 4 cut(s) 527, 1241, 1255, 1337
HpyCH4IV ACGT 1 cut(s) 1407
HpyF10VI GCNNNNNNNGC 7 cut(s) 198, 348, 357, 992, 1001, 1145, 1438
HpyF3I CTNAG 4 cut(s) 131, 140, 646, 1160
HpySE526I ACGT 1 cut(s) 1407
Hsp92II CATG 3 cut(s) 167, 1156, 1459
HspAI GCGC 1 cut(s) 1035
Ksp22I TGATCA 1 cut(s) 30
KspAI GTTAAC 1 cut(s) 901
KspI CCGCGG 1 cut(s) 42
Kzo9I GATC 6 cut(s) 30, 235, 819, 826, 922, 1009
LmnI GCTCC 1 cut(s) 458
Lsp1109I GCAGC 5 cut(s) 36, 190, 326, 1195, 1437
LweI GCATC 6 cut(s) 478, 991, 1110, 1157, 1233, 1391
MaeI CTAG 5 cut(s) 147, 189, 480, 914, 1368
MaeII ACGT 1 cut(s) 1407
MaeIII GTNAC 5 cut(s) 601, 1051, 1060, 1090, 1235
MalI GATC 6 cut(s) 32, 237, 821, 828, 924, 1011
MboI GATC 6 cut(s) 30, 235, 819, 826, 922, 1009
MboII GAAGA 3 cut(s) 606, 729, 1010
MflI RGATCY 1 cut(s) 826
MlsI TGGCCA 1 cut(s) 1304
MluCI AATT 5 cut(s) 211, 343, 381, 713, 1189
MluNI TGGCCA 1 cut(s) 1304
MlyI GAGTC 4 cut(s) 85, 142, 165, 1318
MmeI TCCRAC 3 cut(s) 134, 202, 1301
Mox20I TGGCCA 1 cut(s) 1304
Mph1103I ATGCAT 2 cut(s) 1006, 1150
MscI TGGCCA 1 cut(s) 1304
MseI TTAA 4 cut(s) 378, 878, 900, 1389
MslI CAYNNNNRTG 1 cut(s) 266
Msp20I TGGCCA 1 cut(s) 1304
MspA1I CMGCKG 4 cut(s) 41, 388, 584, 733
MspI CCGG 3 cut(s) 160, 654, 1166
MspR9I CCNGG 2 cut(s) 655, 1070
MvaI CCWGG 1 cut(s) 1070
MvnI CGCG 1 cut(s) 41
MwoI GCNNNNNNNGC 7 cut(s) 198, 348, 357, 992, 1001, 1145, 1438
NciI CCSGG 1 cut(s) 655
NdeI CATATG 1 cut(s) 1006
NdeII GATC 6 cut(s) 30, 235, 819, 826, 922, 1009
NheI GCTAGC 1 cut(s) 913
NlaIII CATG 3 cut(s) 167, 1156, 1459
NlaIV GGNNCC 3 cut(s) 229, 828, 1399
NmuCI GTSAC 4 cut(s) 601, 1051, 1090, 1235
NsiI ATGCAT 2 cut(s) 1006, 1150
OliI CACNNNNGTG 1 cut(s) 266
PaqCI CACCTGC 1 cut(s) 292
PasI CCCWGGG 1 cut(s) 1069
PfeI GAWTC 3 cut(s) 476, 968, 1156
PflFI GACNNNGTC 1 cut(s) 155
PflMI CCANNNNNTGG 1 cut(s) 124
PkrI GCNGC 8 cut(s) 7, 40, 51, 180, 194, 341, 1185, 1427
PleI GAGTC 4 cut(s) 85, 141, 164, 1318
PpsI GAGTC 4 cut(s) 85, 141, 164, 1318
PpuMI RGGWCCY 1 cut(s) 228
PsiI TTATAA 1 cut(s) 873
Psp1406I AACGTT 1 cut(s) 1407
Psp5II RGGWCCY 1 cut(s) 228
Psp6I CCWGG 1 cut(s) 1068
PspGI CCWGG 1 cut(s) 1068
PspN4I GGNNCC 3 cut(s) 229, 828, 1399
PspPI GGNCC 2 cut(s) 228, 1398
PspPPI RGGWCCY 1 cut(s) 228
PsuI RGATCY 1 cut(s) 826
PsyI GACNNNGTC 1 cut(s) 155
PvuII CAGCTG 3 cut(s) 388, 584, 733
RsaI GTAC 5 cut(s) 45, 280, 508, 524, 1446
RsaNI GTAC 5 cut(s) 44, 279, 507, 523, 1445
RseI CAYNNNNRTG 1 cut(s) 266
SacII CCGCGG 1 cut(s) 42
SaqAI TTAA 4 cut(s) 378, 878, 900, 1389
SatI GCNGC 8 cut(s) 6, 39, 50, 179, 193, 340, 1184, 1426
Sau3AI GATC 6 cut(s) 30, 235, 819, 826, 922, 1009
Sau96I GGNCC 2 cut(s) 228, 1398
SchI GAGTC 4 cut(s) 85, 142, 165, 1318
ScrFI CCNGG 2 cut(s) 655, 1070
SfaNI GCATC 6 cut(s) 478, 991, 1110, 1157, 1233, 1391
Sfr303I CCGCGG 1 cut(s) 42
SgrBI CCGCGG 1 cut(s) 42
SinI GGWCC 2 cut(s) 228, 1398
SmiMI CAYNNNNRTG 1 cut(s) 266
SmlI CTYRAG 1 cut(s) 1119
SmoI CTYRAG 1 cut(s) 1119
Sse9I AATT 5 cut(s) 211, 343, 381, 713, 1189
SspMI CTAG 5 cut(s) 147, 189, 480, 914, 1368
StyD4I CCNGG 2 cut(s) 653, 1068
StyI CCWWGG 2 cut(s) 457, 952
TaaI ACNGT 4 cut(s) 527, 1241, 1255, 1337
TaiI ACGT 1 cut(s) 1410
TaqI TCGA 1 cut(s) 234
TaqII GACCGA 1 cut(s) 168
TasI AATT 5 cut(s) 211, 343, 381, 713, 1189
TatI WGTACW 1 cut(s) 506
TauI GCSGC 3 cut(s) 8, 41, 195
TfiI GAWTC 3 cut(s) 476, 968, 1156
Tru1I TTAA 4 cut(s) 378, 878, 900, 1389
Tru9I TTAA 4 cut(s) 378, 878, 900, 1389
TscAI CASTG 7 cut(s) 40, 509, 541, 776, 796, 1111, 1357
TseFI GTSAC 4 cut(s) 601, 1051, 1090, 1235
TseI GCWGC 5 cut(s) 49, 178, 339, 1183, 1425
Tsp45I GTSAC 4 cut(s) 601, 1051, 1090, 1235
TspDTI ATGAA 1 cut(s) 1221
TspRI CASTG 7 cut(s) 40, 509, 541, 776, 796, 1111, 1357
Tth111I GACNNNGTC 1 cut(s) 155
Van91I CCANNNNNTGG 1 cut(s) 124
VpaK11BI GGWCC 2 cut(s) 228, 1398
XapI RAATTY 3 cut(s) 381, 713, 1189
XcmI CCANNNNNNNNNTGG 1 cut(s) 91
XspI CTAG 5 cut(s) 147, 189, 480, 914, 1368
Zsp2I ATGCAT 2 cut(s) 1006, 1150
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.