Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0002560

Physical Location & Seq

Genomic Coordinates Reverse (-)

14626561 .. 14631465

Gene Structure 4905 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1152500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1491 bp

ATGGGATTTCCCACCGTAATTTTCATCGCCGGCGCAATTCTGATGTCGGCGGCTGTGGTCCTCTGTAGTTTTCCGGCGACCCTCAGCCTCGAGAGAGCTTTTCCTTCGAACCACCTAGAGGACCTGAGTCAACTCAGAGCTCGGGACAGAGTCCGGCATGGGAGGAAGCTTCAGTCCTCCAATGGCATCGTTGATTTCCCTGTTGAGGGAACTTACAACCCCTTCCGCGTTGGGCTTTATTATACAAAGCTGCAATTGGGATCTCCTCCAAGAGATTATTATGTGCAGATTGACACCGGAAGTGATGTTTTGTGGGTCAATTGCGGTTCCTGCAATGGTTGCCCTGAGACAAGTGGGCTCCCGATTCAGCTCAATTTGTTTGATCCTGGAAGCTCAACAACGTCACAATTCATTTCTTGCTCGGATCGAAGGTGCAGTCTTGGAGTTCGATCCTCGGATTCTGATTGTTCCACGCAGAATAACCAGTGTTCTTACACATTCCAGTATGGAGATGGCAGTGGGACATCAGGTTATTACGTATCAGACTTGTTGCACCTTGAGACGATTCTTGAGGGTTCTCTGACCCAAAATTATTCAGCTAATGTTGTTTTTGGGTGTAGCACCTTGCAGAGTGGGGACTTGACAAAGTCAGATAGAGCAGTTGATGGGATCTTCGGGTTTGGCCAACAGGGTATGTCTGTCATCTCTCAGTTGTCTTCGCAAGGAGTAGCACCAAGTGTCTTCTCCCACTGCTTGAGGGGAGACGATACTGGTGGAGGTATATTGGTTATCGGCGAGATTGTGGAACCAAATATAGTCTATAGCCCGCTTGTCCCCTCACAGCCTCATTATAATTTGAATCTGCAGAGCATTTCTGTCAACGGGCAGATATTACCCATTGATACAGCAGTGTTTGCAACATCAAGCAACCGAGGAACTATAGTTGATTCTGGTACAACTTTGGCATACCTTGCAGCCGAAGCCTATGACCCTTTTGTCAGTGCTATAACTGCTTCAGTTTCACAATCAGTGCACCCTGTTGTTTCCAGCGCAAATCAATGTTATTTAATCACCTCCAGTGTCAGTGATATATTTCCTCAAGTTAGTTTTAACTTTGCTGGCGGTGCATCCTTGATTCTGAGACCGCAGGACTACCTTATACAGCAGACTTCTGTTAGTGGAGCTGCAAGGTGGTGCATTGGCCTTCAGAAGATTCGAGGTTCGGGGATAACGATTTTAGGAGACCTCGTGCTGAAAGACAAAATCGTGGTCTATGATTTGGGTGGTCAACGAATTGGATGGACTAACTATGACTGTTCAACAACAGTTAATGTTTCTGCAACAAGTAGAACCGGACAAAGTGAATATGTCAATGCAGGACAGCTAAGTGACAGCCGTTCTTTGCATAATGATCGCTACGAGCTGATTCCAGCATGCATGTTGGCTTTCCTTTCACTTATCATAACTATACAAGGAAACTCGTTTTTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004190 GO:0005575 GO:0005623 GO:0005886 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0009056 GO:0009057 GO:0016020 GO:0016787 GO:0019538 GO:0030163 GO:0031224 GO:0031225 GO:0031226 GO:0043170 GO:0044238 GO:0044425 GO:0044459 GO:0044464 GO:0046658 GO:0070001 GO:0070011 GO:0071704 GO:0071944 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TAXi_C TAXi_N

Protein Analysis

497

Amino Acids

53.13

Weight (kDa)

4.97

Isoelectric Point (pI)

45.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TAXi_N	PF14543	80 - 265	4.3e-42	Xylanase inhibitor N-terminal
Asp	PF00026	80 - 434	6.8e-31	Eukaryotic aspartyl protease
TAXi_C	PF14541	283 - 435	3.8e-23	Xylanase inhibitor C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002560)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G22850
fragaria_vesca	FvH4_3g30200 FvH4_3g30200 FvH4_3g30200 FvH4_7g02560 FvH4_7g02560 FvH4_7g02560 FvH4_7g02560
malus_domestica	MD02G1291400.v1.1 MD03G1130700.v1.1 MD11G1152500.v1.1
prunus_persica	Prupe.2G031400_v2.0.a1 Prupe.6G115500_v2.0.a1 Prupe.6G115500_v2.0.a1
pyrus_communis	pycom02g24630 pycom02g24640 pycom11g12500
rosa_chinensis	RchiOBHm_Chr1g0321281 RchiOBHm_Chr5g0055981
rosa_laevigata	RLG00000030431 RLG00000035040
rosa_multiflora	Rmu_co8118894.1_g000001 Rmu_sc0029150.1_g000001
rosa_roxburghii	Rroxscaffold_160G00433920 Rroxscaffold_1G00024290 Rroxscaffold_4G00327850
rosa_rugosa	Rorug01G0031900 Rorug05G0296800 Rorug05G0296900
rosa_samantha	Rh1AG044000 Rh1BG041700 Rh1CG046600 Rh1DG051200 Rh5AG367900 Rh5BG378300 Rh5CG401700 Rh5DG391400
rosa_wichuraiana	Rw0G006980 Rw1G003880 Rw5G034530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	852
AasI	GACNNNNNNGTC	1 cut(s)	995
AccII	CGCG	1 cut(s)	228
AciI	CCGC	6 cut(s)	50, 226, 324, 827, 1122, 1145
AclWI	GGATC	5 cut(s)	268, 377, 432, 444, 677
AcoI	YGGCCR	1 cut(s)	682
AcuI	CTGAAG	3 cut(s)	155, 999, 1190
AdeI	CACNNNGTG	1 cut(s)	737
AfaI	GTAC	1 cut(s)	955
AfiI	CCNNNNNNNGG	3 cut(s)	118, 205, 206
AgsI	TTSAA	2 cut(s)	859, 1320
AjnI	CCWGG	1 cut(s)	385
Alw21I	GWGCWC	2 cut(s)	142, 1035
Alw26I	GTCTC	5 cut(s)	341, 554, 756, 1135, 1236
Alw44I	GTGCAC	1 cut(s)	1031
AlwI	GGATC	5 cut(s)	268, 377, 432, 444, 677
Ama87I	CYCGRG	2 cut(s)	89, 141
AoxI	GGCC	2 cut(s)	682, 1201
ApaLI	GTGCAC	1 cut(s)	1031
ApeKI	GCWGC	3 cut(s)	250, 974, 1184
ArsI	GACNNNNNNTTYG	4 cut(s)	421, 453, 1254, 1286
AspLEI	GCGC	2 cut(s)	35, 1052
AspS9I	GGNCC	2 cut(s)	58, 121
AsuHPI	GGTGA	1 cut(s)	1063
AsuII	TTCGAA	1 cut(s)	107
AvaI	CYCGRG	2 cut(s)	89, 141
AvaII	GGWCC	2 cut(s)	58, 121
BaeGI	GKGCMC	1 cut(s)	1035
BaeI	ACNNNNGTAYC	2 cut(s)	894, 927
BalI	TGGCCA	1 cut(s)	684
BanII	GRGCYC	2 cut(s)	142, 360
BauI	CACGAG	1 cut(s)	1247
BbsI	GAAGAC	2 cut(s)	708, 733
Bbv12I	GWGCWC	2 cut(s)	142, 1035
BbvCI	CCTCAGC	1 cut(s)	83
BbvI	GCAGC	3 cut(s)	237, 986, 1171
BccI	CCATC	3 cut(s)	506, 659, 1293
BceAI	ACGGC	1 cut(s)	1380
BcgI	CGANNNNNNTGC	2 cut(s)	1394, 1428
BciT130I	CCWGG	1 cut(s)	387
BcoDI	GTCTC	5 cut(s)	341, 554, 756, 1135, 1236
BfaI	CTAG	1 cut(s)	116
BfmI	CTRYAG	4 cut(s)	64, 820, 863, 939
BisI	GCNGC	4 cut(s)	51, 251, 975, 1185
BlsI	GCNGC	4 cut(s)	52, 252, 976, 1186
Bme1390I	CCNGG	1 cut(s)	387
Bme18I	GGWCC	2 cut(s)	58, 121
BmeT110I	CYCGRG	2 cut(s)	89, 141
BmgT120I	GGNCC	2 cut(s)	58, 121
BmiI	GGNNCC	3 cut(s)	328, 359, 807
BmrFI	CCNGG	1 cut(s)	387
BmsI	GCATC	2 cut(s)	195, 1136
BoxI	GACNNNNGTC	1 cut(s)	126
BpiI	GAAGAC	2 cut(s)	708, 733
BpmI	CTGGAG	1 cut(s)	1060
Bpu10I	CCTNAGC	1 cut(s)	83
Bpu14I	TTCGAA	1 cut(s)	107
BpuEI	CTTGAG	4 cut(s)	578, 590, 775, 1083
BsaAI	YACGTR	1 cut(s)	538
BsaI	GGTCTC	2 cut(s)	1135, 1236
BsaJI	CCNNGG	2 cut(s)	453, 931
BsaWI	WCCGGW	2 cut(s)	296, 1352
BsaXI	ACNNNNNCTCC	2 cut(s)	1233, 1263
Bsc4I	CCNNNNNNNGG	3 cut(s)	118, 205, 206
Bse118I	RCCGGY	1 cut(s)	29
Bse1I	ACTGG	4 cut(s)	484, 502, 775, 1077
Bse3DI	GCAATG	1 cut(s)	340
BseBI	CCWGG	1 cut(s)	387
BseDI	CCNNGG	2 cut(s)	453, 931
BseGI	GGATG	2 cut(s)	1127, 1304
BseLI	CCNNNNNNNGG	3 cut(s)	118, 205, 206
BseMI	GCAATG	1 cut(s)	340
BseMII	CTCAG	6 cut(s)	97, 116, 148, 336, 722, 1130
BseNI	ACTGG	4 cut(s)	484, 502, 775, 1077
BseRI	GAGGAG	1 cut(s)	255
BseSI	GKGCMC	1 cut(s)	1035
BseXI	GCAGC	3 cut(s)	237, 986, 1171
BsgI	GTGCAG	2 cut(s)	305, 454
Bsh1236I	CGCG	1 cut(s)	228
BshFI	GGCC	2 cut(s)	684, 1203
BsiHKAI	GWGCWC	2 cut(s)	142, 1035
BsiHKCI	CYCGRG	2 cut(s)	89, 141
BsiSI	CCGG	5 cut(s)	30, 74, 154, 297, 1353
BslFI	GGGAC	4 cut(s)	158, 535, 650, 818
BslI	CCNNNNNNNGG	3 cut(s)	118, 205, 206
BsmAI	GTCTC	5 cut(s)	341, 554, 756, 1135, 1236
BsmBI	CGTCTC	2 cut(s)	554, 756
BsmFI	GGGAC	4 cut(s)	158, 535, 650, 818
BsnI	GGCC	2 cut(s)	684, 1203
Bso31I	GGTCTC	2 cut(s)	1135, 1236
BsoBI	CYCGRG	2 cut(s)	89, 141
Bsp119I	TTCGAA	1 cut(s)	107
Bsp1286I	GDGCHC	3 cut(s)	142, 360, 1035
Bsp143I	GATC	6 cut(s)	260, 382, 424, 449, 669, 1411
BspACI	CCGC	6 cut(s)	50, 226, 324, 827, 1122, 1145
BspANI	GGCC	2 cut(s)	684, 1203
BspCNI	CTCAG	6 cut(s)	96, 117, 147, 337, 721, 1131
BspFNI	CGCG	1 cut(s)	228
BspLI	GGNNCC	3 cut(s)	328, 359, 807
BspMAI	CTGCAG	1 cut(s)	867
BspPI	GGATC	5 cut(s)	268, 377, 432, 444, 677
BspT104I	TTCGAA	1 cut(s)	107
BspTNI	GGTCTC	2 cut(s)	1135, 1236
BsrDI	GCAATG	1 cut(s)	340
BsrFI	RCCGGY	1 cut(s)	29
BsrI	ACTGG	4 cut(s)	484, 502, 775, 1077
BssAI	RCCGGY	1 cut(s)	29
BssECI	CCNNGG	2 cut(s)	453, 931
BssMI	GATC	6 cut(s)	260, 382, 424, 449, 669, 1411
BssSI	CACGAG	1 cut(s)	1247
Bst2BI	CACGAG	1 cut(s)	1247
Bst2UI	CCWGG	1 cut(s)	387
Bst4CI	ACNGT	3 cut(s)	16, 1316, 1327
BstAPI	GCANNNNNTGC	3 cut(s)	339, 914, 971
BstBAI	YACGTR	1 cut(s)	538
BstBI	TTCGAA	1 cut(s)	107
BstC8I	GCNNGC	4 cut(s)	31, 827, 1120, 1435
BstDEI	CTNAG	7 cut(s)	83, 125, 134, 345, 708, 1139, 1385
BstF5I	GGATG	2 cut(s)	1127, 1304
BstFNI	CGCG	1 cut(s)	228
BstHHI	GCGC	2 cut(s)	35, 1052
BstKTI	GATC	6 cut(s)	263, 385, 427, 452, 672, 1414
BstMAI	GTCTC	5 cut(s)	341, 554, 756, 1135, 1236
BstMBI	GATC	6 cut(s)	260, 382, 424, 449, 669, 1411
BstMWI	GCNNNNNNNGC	7 cut(s)	330, 339, 914, 971, 980, 1010, 1124
BstNI	CCWGG	1 cut(s)	387
BstNSI	RCATGY	2 cut(s)	1437, 1441
BstPAI	GACNNNNGTC	1 cut(s)	126
BstSCI	CCNGG	1 cut(s)	385
BstSFI	CTRYAG	4 cut(s)	64, 820, 863, 939
BstSLI	GKGCMC	1 cut(s)	1035
BstSNI	TACGTA	1 cut(s)	538
BstUI	CGCG	1 cut(s)	228
BstV1I	GCAGC	3 cut(s)	237, 986, 1171
BstV2I	GAAGAC	2 cut(s)	708, 733
BstX2I	RGATCY	2 cut(s)	260, 669
BstYI	RGATCY	2 cut(s)	260, 669
BsuRI	GGCC	2 cut(s)	684, 1203
BtgZI	GCGATG	1 cut(s)	10
BtsCI	GGATG	2 cut(s)	1127, 1304
BtsI	GCAGTG	3 cut(s)	523, 748, 915
BtsIMutI	CAGTG	8 cut(s)	491, 523, 748, 915, 1006, 1035, 1084, 1090
Cac8I	GCNNGC	4 cut(s)	31, 827, 1120, 1435
CfoI	GCGC	2 cut(s)	35, 1052
Cfr10I	RCCGGY	1 cut(s)	29
Cfr13I	GGNCC	2 cut(s)	58, 121
Csp6I	GTAC	1 cut(s)	954
CviAII	CATG	3 cut(s)	158, 1434, 1438
CviQI	GTAC	1 cut(s)	954
DdeI	CTNAG	7 cut(s)	83, 125, 134, 345, 708, 1139, 1385
DpnI	GATC	6 cut(s)	262, 384, 426, 451, 671, 1413
DpnII	GATC	6 cut(s)	260, 382, 424, 449, 669, 1411
DraIII	CACNNNGTG	1 cut(s)	737
DrdI	GACNNNNNNGTC	1 cut(s)	995
DseDI	GACNNNNNNGTC	1 cut(s)	995
EaeI	YGGCCR	1 cut(s)	682
Ecl136II	GAGCTC	1 cut(s)	140
Eco105I	TACGTA	1 cut(s)	538
Eco24I	GRGCYC	2 cut(s)	142, 360
Eco31I	GGTCTC	2 cut(s)	1135, 1236
Eco47I	GGWCC	2 cut(s)	58, 121
Eco53kI	GAGCTC	1 cut(s)	140
Eco57I	CTGAAG	3 cut(s)	155, 999, 1190
Eco88I	CYCGRG	2 cut(s)	89, 141
EcoICRI	GAGCTC	1 cut(s)	140
EcoO109I	RGGNCCY	1 cut(s)	121
EcoRII	CCWGG	1 cut(s)	385
EcoT22I	ATGCAT	1 cut(s)	1439
EcoT38I	GRGCYC	2 cut(s)	142, 360
Esp3I	CGTCTC	2 cut(s)	554, 756
FaeI	CATG	3 cut(s)	161, 1437, 1441
FaqI	GGGAC	4 cut(s)	158, 535, 650, 818
FatI	CATG	3 cut(s)	157, 1433, 1437
FauI	CCCGC	1 cut(s)	834
Fnu4HI	GCNGC	4 cut(s)	51, 251, 975, 1185
FokI	GGATG	2 cut(s)	1114, 1311
FriOI	GRGCYC	2 cut(s)	142, 360
Fsp4HI	GCNGC	4 cut(s)	51, 251, 975, 1185
FspBI	CTAG	1 cut(s)	116
GlaI	GCGC	2 cut(s)	34, 1051
GluI	GCNGC	4 cut(s)	51, 251, 975, 1185
GsuI	CTGGAG	1 cut(s)	1060
HaeIII	GGCC	2 cut(s)	684, 1203
HapII	CCGG	5 cut(s)	30, 74, 154, 297, 1353
HhaI	GCGC	2 cut(s)	35, 1052
Hin1II	CATG	3 cut(s)	161, 1437, 1441
Hin6I	GCGC	2 cut(s)	33, 1050
HinP1I	GCGC	2 cut(s)	33, 1050
HincII	GTYRAC	3 cut(s)	131, 880, 1289
HindII	GTYRAC	3 cut(s)	131, 880, 1289
HindIII	AAGCTT	1 cut(s)	167
HpaII	CCGG	5 cut(s)	30, 74, 154, 297, 1353
HphI	GGTGA	1 cut(s)	1063
Hpy166II	GTNNAC	4 cut(s)	131, 880, 1033, 1289
Hpy188III	TCNNGA	4 cut(s)	91, 143, 361, 569
Hpy8I	GTNNAC	4 cut(s)	131, 880, 1033, 1289
HpyAV	CCTTC	4 cut(s)	114, 232, 423, 1214
HpyCH4III	ACNGT	3 cut(s)	16, 1316, 1327
HpyCH4IV	ACGT	2 cut(s)	401, 537
HpyF10VI	GCNNNNNNNGC	7 cut(s)	330, 339, 914, 971, 980, 1010, 1124
HpyF3I	CTNAG	7 cut(s)	83, 125, 134, 345, 708, 1139, 1385
HpySE526I	ACGT	2 cut(s)	401, 537
Hsp92II	CATG	3 cut(s)	161, 1437, 1441
HspAI	GCGC	2 cut(s)	33, 1050
KroI	GCCGGC	1 cut(s)	29
KroNI	GCCGGC	1 cut(s)	31
Kzo9I	GATC	6 cut(s)	260, 382, 424, 449, 669, 1411
LmnI	GCTCC	2 cut(s)	363, 1181
Lsp1109I	GCAGC	3 cut(s)	237, 986, 1171
LweI	GCATC	2 cut(s)	195, 1136
MaeI	CTAG	1 cut(s)	116
MaeII	ACGT	2 cut(s)	401, 537
MaeIII	GTNAC	2 cut(s)	402, 1388
MalI	GATC	6 cut(s)	262, 384, 426, 451, 671, 1413
MboI	GATC	6 cut(s)	260, 382, 424, 449, 669, 1411
MboII	GAAGA	4 cut(s)	664, 708, 733, 1222
MfeI	CAATTG	2 cut(s)	254, 319
MflI	RGATCY	2 cut(s)	260, 669
MhlI	GDGCHC	3 cut(s)	142, 360, 1035
MlsI	TGGCCA	1 cut(s)	684
MluCI	AATT	9 cut(s)	18, 36, 254, 319, 373, 407, 589, 853, 1293
MluNI	TGGCCA	1 cut(s)	684
MlyI	GAGTC	2 cut(s)	136, 159
Mox20I	TGGCCA	1 cut(s)	684
Mph1103I	ATGCAT	1 cut(s)	1439
MreI	CGCCGGCG	1 cut(s)	29
MroNI	GCCGGC	1 cut(s)	29
MscI	TGGCCA	1 cut(s)	684
MseI	TTAA	3 cut(s)	1067, 1110, 1329
Msp20I	TGGCCA	1 cut(s)	684
MspI	CCGG	5 cut(s)	30, 74, 154, 297, 1353
MspR9I	CCNGG	1 cut(s)	387
MunI	CAATTG	2 cut(s)	254, 319
MvaI	CCWGG	1 cut(s)	387
MvnI	CGCG	1 cut(s)	228
MwoI	GCNNNNNNNGC	7 cut(s)	330, 339, 914, 971, 980, 1010, 1124
NaeI	GCCGGC	1 cut(s)	31
NdeII	GATC	6 cut(s)	260, 382, 424, 449, 669, 1411
NgoMIV	GCCGGC	1 cut(s)	29
NlaIII	CATG	3 cut(s)	161, 1437, 1441
NlaIV	GGNNCC	3 cut(s)	328, 359, 807
NmuCI	GTSAC	2 cut(s)	402, 1388
NsiI	ATGCAT	1 cut(s)	1439
NspI	RCATGY	2 cut(s)	1437, 1441
NspV	TTCGAA	1 cut(s)	107
PaeI	GCATGC	1 cut(s)	1437
PaeR7I	CTCGAG	1 cut(s)	89
PcsI	WCGNNNNNNNCGW	1 cut(s)	1229
PdiI	GCCGGC	1 cut(s)	31
PfeI	GAWTC	8 cut(s)	364, 458, 565, 859, 947, 1135, 1213, 1426
PflFI	GACNNNGTC	2 cut(s)	149, 646
PfoI	TCCNGGA	1 cut(s)	385
PkrI	GCNGC	4 cut(s)	52, 252, 976, 1186
PleI	GAGTC	2 cut(s)	135, 158
PpsI	GAGTC	2 cut(s)	135, 158
Ppu21I	YACGTR	1 cut(s)	538
PpuMI	RGGWCCY	1 cut(s)	121
PshAI	GACNNNNGTC	1 cut(s)	126
PsiI	TTATAA	1 cut(s)	852
Psp124BI	GAGCTC	1 cut(s)	142
Psp5II	RGGWCCY	1 cut(s)	121
Psp6I	CCWGG	1 cut(s)	385
PspGI	CCWGG	1 cut(s)	385
PspN4I	GGNNCC	3 cut(s)	328, 359, 807
PspPI	GGNCC	2 cut(s)	58, 121
PspPPI	RGGWCCY	1 cut(s)	121
PstI	CTGCAG	1 cut(s)	867
PsuI	RGATCY	2 cut(s)	260, 669
PsyI	GACNNNGTC	2 cut(s)	149, 646
RsaI	GTAC	1 cut(s)	955
RsaNI	GTAC	1 cut(s)	954
SacI	GAGCTC	1 cut(s)	142
SaqAI	TTAA	3 cut(s)	1067, 1110, 1329
SatI	GCNGC	4 cut(s)	51, 251, 975, 1185
Sau3AI	GATC	6 cut(s)	260, 382, 424, 449, 669, 1411
Sau96I	GGNCC	2 cut(s)	58, 121
SchI	GAGTC	2 cut(s)	136, 159
ScrFI	CCNGG	1 cut(s)	387
SduI	GDGCHC	3 cut(s)	142, 360, 1035
SfaNI	GCATC	2 cut(s)	195, 1136
SfcI	CTRYAG	4 cut(s)	64, 820, 863, 939
Sfr274I	CTCGAG	1 cut(s)	89
SfuI	TTCGAA	1 cut(s)	107
SgrAI	CRCCGGYG	1 cut(s)	29
SinI	GGWCC	2 cut(s)	58, 121
SlaI	CTCGAG	1 cut(s)	89
SmlI	CTYRAG	5 cut(s)	89, 557, 569, 754, 1098
SmoI	CTYRAG	5 cut(s)	89, 557, 569, 754, 1098
SnaBI	TACGTA	1 cut(s)	538
SphI	GCATGC	1 cut(s)	1437
Sse9I	AATT	9 cut(s)	18, 36, 254, 319, 373, 407, 589, 853, 1293
SsiI	CCGC	6 cut(s)	50, 226, 324, 827, 1122, 1145
SspMI	CTAG	1 cut(s)	116
SstI	GAGCTC	1 cut(s)	142
StyD4I	CCNGG	1 cut(s)	385
TaaI	ACNGT	3 cut(s)	16, 1316, 1327
TaiI	ACGT	2 cut(s)	404, 540
TaqI	TCGA	5 cut(s)	90, 107, 427, 448, 1216
TasI	AATT	9 cut(s)	18, 36, 254, 319, 373, 407, 589, 853, 1293
TauI	GCSGC	1 cut(s)	53
TfiI	GAWTC	8 cut(s)	364, 458, 565, 859, 947, 1135, 1213, 1426
Tru1I	TTAA	3 cut(s)	1067, 1110, 1329
Tru9I	TTAA	3 cut(s)	1067, 1110, 1329
TscAI	CASTG	8 cut(s)	491, 523, 755, 915, 1006, 1035, 1084, 1090
TseFI	GTSAC	2 cut(s)	402, 1388
TseI	GCWGC	3 cut(s)	250, 974, 1184
Tsp45I	GTSAC	2 cut(s)	402, 1388
TspDTI	ATGAA	2 cut(s)	13, 400
TspRI	CASTG	8 cut(s)	491, 523, 755, 915, 1006, 1035, 1084, 1090
Tth111I	GACNNNGTC	2 cut(s)	149, 646
VneI	GTGCAC	1 cut(s)	1031
VpaK11BI	GGWCC	2 cut(s)	58, 121
XceI	RCATGY	2 cut(s)	1437, 1441
XcmI	CCANNNNNNNNNTGG	1 cut(s)	509
XhoI	CTCGAG	1 cut(s)	89
XspI	CTAG	1 cut(s)	116
Zsp2I	ATGCAT	1 cut(s)	1439

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.