Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0002560

Physical Location & Seq

Genomic Coordinates Forward (+)

34209091 .. 34212291

Gene Structure 3201 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0296800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1518 bp

ATGAACAAAAACTCGTGGCTCCTGAAGATCGTGGTGTTCCTCTTCGCCCTAAACTCCCTCTCTCTCTGCCTCTACTTCACTTCCCACTCCAAAACCCTAAACACCCCTCCACCCCTCAACCCCCACCCTCAAATCAACCGCCTCCCCCTAACAGATCAAACCCACCGCCACACCTACCGCTTCTCTAAGCCATGGCCAATCCTCCCCTCCTACCTCCCCTGGACCCAGACCCCAAACGCGGAGTTCCGCTCCTGCGAGGCCTACTTCGGCAACGGCTTCACCCGCCGGGTCGATCTCCTCAAGCCCACTAAAGATTCCGGCAGCTGGTTCCGGTGCGCGTTCAGCGAGACCCTGAGGAGCTCGGTGTGCGAGGGAGGGGGGATCCGGATGGTGCCGGAGAGGGTGAAGATGTCGATCGGCGGCGAGGTTTTGGAGGATGTGATTGGGAGAGGGGAGGAGGAGGAGTTGCCGGAGTTTCGAAACGGTGCGTTTGAGGTCGATGGTGGAGGAGGAGAGGAGAGAGGGCTTGTGAGTCGAGAGTTTCTTGATGAGTATGTGCCGCGTGGTGAGATTGGGAAGCATACTATGAGGGAGCTGATCGGGTCGATTCGGGTTGTGCCCAGTAAAGAGTTTCAGTGCACTGAGTGGATTGAGGAGCCAACGCTTCTGGTGACACGGTTTGAGTATGCAAATGTTTTCCACACATTCACGGATTGGTATAGCGGTTATGTAGCTTCCAGAGTCACTGGCTTACCTAGCCGGCCTCATGTTGTCTTTGTAGATGGCCATTGTAGGACACAATTGGAAGAAACATGGAAAGCGTTGTTCTCTAGCATTAGATATGTGAAAAACTTTAGTGGTCCAGTTTGTTTTCGTCATGCTATTATTTCACCTCTTGGATATGAAACTGCATGGTTTAAGGGGCTCACTGAAGATATAGCGTGTGAGGGAGCTTCTGCACCAGAGCTGTGGCAACACCCTGATGACAAGAAAACTGCACGACTGTCTGAGTTTGGAGAAATGATTAGAGCTGCTTTTGGAATTCCAGTGCGTAGGCAGCGTATTGAGAAGCAAGCCTCAGGTCTCAATATCCTTTTTGTTCGCCGTGAAGATTATCTACCGCATCCACGTCACGGTGGTAAAGTTGAATCAAGGTTAAGCAACGAACAAGAAGTCTTTGATGCCTTAAAGAGCTGGGTGTCGAATCACAAGGAATGCAAAATAAACTTAGTGAACGGATTGTTTGCACACATGTCGATGAAAGAACAAGTTCGGGCCATTCAAGATGCTTCTGTTATTATTGGTGCTCATGGTGCAGGTCTCACGCATGTAGTATCTGCATTGCCGAAAACCGTGGTTCTGGAGATCATTAGCAGCCAATATAGACGGCCGCATTTTGCTTTAATTGCCCAGTGGAAGGGGTTGGAATATCATGCCATAAATCTTGCGGGTTTGTATGCCTCTCCGTCAGATGTTATTGACAACCTTAGCCGTATACTGAGGACCCTTGGGTGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004190 GO:0005575 GO:0005623 GO:0005886 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0009056 GO:0009057 GO:0016020 GO:0016787 GO:0019538 GO:0030163 GO:0031224 GO:0031225 GO:0031226 GO:0043170 GO:0044238 GO:0044425 GO:0044459 GO:0044464 GO:0046658 GO:0070001 GO:0070011 GO:0071704 GO:0071944 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TAXi_N

Protein Analysis

505

Amino Acids

57.22

Weight (kDa)

8.0

Isoelectric Point (pI)

44.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_transf_61	PF04577	362 - 454	1.9e-11	Glycosyltransferase 61

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002560)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G22850
fragaria_vesca	FvH4_3g30200 FvH4_3g30200 FvH4_3g30200 FvH4_7g02560 FvH4_7g02560 FvH4_7g02560 FvH4_7g02560
malus_domestica	MD02G1291400.v1.1 MD03G1130700.v1.1 MD11G1152500.v1.1
prunus_persica	Prupe.2G031400_v2.0.a1 Prupe.6G115500_v2.0.a1 Prupe.6G115500_v2.0.a1
pyrus_communis	pycom02g24630 pycom02g24640 pycom11g12500
rosa_chinensis	RchiOBHm_Chr1g0321281 RchiOBHm_Chr5g0055981
rosa_laevigata	RLG00000030431 RLG00000035040
rosa_multiflora	Rmu_co8118894.1_g000001 Rmu_sc0029150.1_g000001
rosa_roxburghii	Rroxscaffold_160G00433920 Rroxscaffold_1G00024290 Rroxscaffold_4G00327850
rosa_rugosa	Rorug01G0031900 Rorug05G0296800 Rorug05G0296900
rosa_samantha	Rh1AG044000 Rh1BG041700 Rh1CG046600 Rh1DG051200 Rh5AG367900 Rh5BG378300 Rh5CG401700 Rh5DG391400
rosa_wichuraiana	Rw0G006980 Rw1G003880 Rw5G034530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1307
AccB1I	GGYRCC	1 cut(s)	391
AccBSI	CCGCTC	1 cut(s)	249
AccI	GTMKAC	1 cut(s)	1495
AccII	CGCG	3 cut(s)	239, 338, 562
AccIII	TCCGGA	1 cut(s)	384
AclWI	GGATC	2 cut(s)	376, 389
AcoI	YGGCCR	3 cut(s)	194, 784, 1388
AcsI	RAATTY	1 cut(s)	1041
AcuI	CTGAAG	2 cut(s)	44, 951
AdeI	CACNNNGTG	1 cut(s)	645
AfiI	CCNNNNNNNGG	4 cut(s)	238, 324, 1133, 1417
AflIII	ACRYGT	1 cut(s)	1251
AgsI	TTSAA	2 cut(s)	1148, 1283
AjiI	CACGTC	1 cut(s)	1130
AjnI	CCWGG	1 cut(s)	218
AluBI	AGCT	8 cut(s)	324, 360, 595, 734, 953, 967, 1031, 1194
AluI	AGCT	8 cut(s)	324, 360, 595, 734, 953, 967, 1031, 1194
Alw21I	GWGCWC	3 cut(s)	362, 641, 1309
Alw26I	GTCTC	3 cut(s)	341, 1088, 1325
Alw44I	GTGCAC	1 cut(s)	637
AlwI	GGATC	2 cut(s)	376, 389
Aor13HI	TCCGGA	1 cut(s)	384
AoxI	GGCC	6 cut(s)	194, 258, 761, 784, 1275, 1388
ApaLI	GTGCAC	1 cut(s)	637
ApeKI	GCWGC	4 cut(s)	321, 1031, 1057, 1374
ApoI	RAATTY	1 cut(s)	1041
ArsI	GACNNNNNNTTYG	2 cut(s)	1158, 1190
Asp700I	GAANNNNTTC	1 cut(s)	1269
AspLEI	GCGC	1 cut(s)	338
AspS9I	GGNCC	4 cut(s)	222, 860, 1275, 1503
AsuC2I	CCSGG	1 cut(s)	287
AsuHPI	GGTGA	5 cut(s)	271, 415, 578, 682, 882
AsuII	TTCGAA	1 cut(s)	478
AvaII	GGWCC	3 cut(s)	222, 860, 1503
AxyI	CCTNAGG	2 cut(s)	353, 1078
BaeGI	GKGCMC	2 cut(s)	621, 641
BalI	TGGCCA	2 cut(s)	196, 786
BamHI	GGATCC	1 cut(s)	381
BanI	GGYRCC	1 cut(s)	391
BanII	GRGCYC	2 cut(s)	362, 927
BarI	GAAGNNNNNNTAC	2 cut(s)	1101, 1133
BauI	CACGAG	1 cut(s)	13
Bbv12I	GWGCWC	3 cut(s)	362, 641, 1309
BbvI	GCAGC	4 cut(s)	333, 1018, 1069, 1386
BccI	CCATC	3 cut(s)	382, 494, 776
BceAI	ACGGC	4 cut(s)	289, 1089, 1403, 1476
BcgI	CGANNNNNNTGC	2 cut(s)	1236, 1270
BciT130I	CCWGG	1 cut(s)	220
BcnI	CCSGG	1 cut(s)	287
BcoDI	GTCTC	3 cut(s)	341, 1088, 1325
BfaI	CTAG	2 cut(s)	756, 831
BfuAI	ACCTGC	1 cut(s)	1307
BisI	GCNGC	7 cut(s)	322, 421, 560, 1032, 1058, 1375, 1391
BlsI	GCNGC	7 cut(s)	323, 422, 561, 1033, 1059, 1376, 1392
Bme1390I	CCNGG	2 cut(s)	220, 287
Bme18I	GGWCC	3 cut(s)	222, 860, 1503
BmgBI	CACGTC	1 cut(s)	1130
BmgT120I	GGNCC	4 cut(s)	222, 860, 1275, 1503
BmiI	GGNNCC	7 cut(s)	20, 224, 329, 383, 393, 657, 1505
BmrFI	CCNGG	2 cut(s)	220, 287
BmrI	ACTGGG	2 cut(s)	615, 1405
BmsI	GCATC	3 cut(s)	1132, 1171, 1276
BmuI	ACTGGG	2 cut(s)	615, 1405
BplI	GAGNNNNNCTC	2 cut(s)	233, 265
BpmI	CTGGAG	1 cut(s)	1382
Bpu10I	CCTNAGC	1 cut(s)	1487
Bpu14I	TTCGAA	1 cut(s)	478
BpuEI	CTTGAG	1 cut(s)	284
BpuMI	CCSGG	1 cut(s)	287
BsaBI	GATNNNNATC	1 cut(s)	413
BsaI	GGTCTC	3 cut(s)	341, 1088, 1325
BsaJI	CCNNGG	4 cut(s)	191, 218, 1353, 1507
BsaWI	WCCGGW	2 cut(s)	330, 384
BsaXI	ACNNNNNCTCC	2 cut(s)	449, 479
Bsc4I	CCNNNNNNNGG	4 cut(s)	238, 324, 1133, 1417
Bse118I	RCCGGY	1 cut(s)	759
Bse1I	ACTGG	5 cut(s)	621, 751, 863, 1046, 1411
Bse21I	CCTNAGG	2 cut(s)	353, 1078
Bse3DI	GCAATG	1 cut(s)	1340
Bse8I	GATNNNNATC	1 cut(s)	413
BseAI	TCCGGA	1 cut(s)	384
BseBI	CCWGG	1 cut(s)	220
BseDI	CCNNGG	4 cut(s)	191, 218, 1353, 1507
BseGI	GGATG	3 cut(s)	393, 442, 1123
BseJI	GATNNNNATC	1 cut(s)	413
BseLI	CCNNNNNNNGG	4 cut(s)	238, 324, 1133, 1417
BseMI	GCAATG	1 cut(s)	1340
BseMII	CTCAG	5 cut(s)	344, 633, 999, 1092, 1490
BseNI	ACTGG	5 cut(s)	621, 751, 863, 1046, 1411
BseRI	GAGGAG	9 cut(s)	287, 370, 470, 473, 476, 522, 525, 530, 668
BseSI	GKGCMC	2 cut(s)	621, 641
BseX3I	CGGCCG	1 cut(s)	1388
BseXI	GCAGC	4 cut(s)	333, 1018, 1069, 1386
BseYI	CCCAGC	1 cut(s)	1194
BsgI	GTGCAG	3 cut(s)	942, 981, 1335
Bsh1236I	CGCG	3 cut(s)	239, 338, 562
Bsh1285I	CGRYCG	2 cut(s)	417, 1391
BshFI	GGCC	6 cut(s)	196, 260, 763, 786, 1277, 1390
BshNI	GGYRCC	1 cut(s)	391
BsiEI	CGRYCG	2 cut(s)	417, 1391
BsiHKAI	GWGCWC	3 cut(s)	362, 641, 1309
BsiSI	CCGG	7 cut(s)	286, 318, 331, 385, 395, 470, 760
BslI	CCNNNNNNNGG	4 cut(s)	238, 324, 1133, 1417
BsmAI	GTCTC	3 cut(s)	341, 1088, 1325
BsmI	GAATGC	1 cut(s)	1220
BsnI	GGCC	6 cut(s)	196, 260, 763, 786, 1277, 1390
Bso31I	GGTCTC	3 cut(s)	341, 1088, 1325
Bsp119I	TTCGAA	1 cut(s)	478
Bsp1286I	GDGCHC	5 cut(s)	362, 621, 641, 927, 1309
Bsp13I	TCCGGA	1 cut(s)	384
Bsp143I	GATC	7 cut(s)	27, 154, 292, 381, 414, 597, 1365
Bsp19I	CCATGG	1 cut(s)	191
BspANI	GGCC	6 cut(s)	196, 260, 763, 786, 1277, 1390
BspCNI	CTCAG	5 cut(s)	345, 634, 1000, 1091, 1491
BspEI	TCCGGA	1 cut(s)	384
BspFNI	CGCG	3 cut(s)	239, 338, 562
BspLI	GGNNCC	7 cut(s)	20, 224, 329, 383, 393, 657, 1505
BspMI	ACCTGC	1 cut(s)	1307
BspPI	GGATC	2 cut(s)	376, 389
BspT104I	TTCGAA	1 cut(s)	478
BspT107I	GGYRCC	1 cut(s)	391
BspTNI	GGTCTC	3 cut(s)	341, 1088, 1325
BsrBI	CCGCTC	1 cut(s)	249
BsrDI	GCAATG	1 cut(s)	1340
BsrFI	RCCGGY	1 cut(s)	759
BsrI	ACTGG	5 cut(s)	621, 751, 863, 1046, 1411
BssAI	RCCGGY	1 cut(s)	759
BssECI	CCNNGG	4 cut(s)	191, 218, 1353, 1507
BssMI	GATC	7 cut(s)	27, 154, 292, 381, 414, 597, 1365
BssNAI	GTATAC	1 cut(s)	1496
BssSI	CACGAG	1 cut(s)	13
BssT1I	CCWWGG	2 cut(s)	191, 1507
Bst1107I	GTATAC	1 cut(s)	1496
Bst2BI	CACGAG	1 cut(s)	13
Bst2UI	CCWGG	1 cut(s)	220
Bst4CI	ACNGT	5 cut(s)	485, 678, 1005, 1136, 1354
Bst6I	CTCTTC	1 cut(s)	47
BstBI	TTCGAA	1 cut(s)	478
BstC8I	GCNNGC	2 cut(s)	761, 1074
BstDEI	CTNAG	8 cut(s)	186, 353, 642, 1008, 1078, 1228, 1487, 1499
BstDSI	CCRYGG	2 cut(s)	191, 1353
BstF5I	GGATG	3 cut(s)	393, 442, 1123
BstFNI	CGCG	3 cut(s)	239, 338, 562
BstHHI	GCGC	1 cut(s)	338
BstKTI	GATC	7 cut(s)	30, 157, 295, 384, 417, 600, 1368
BstMAI	GTCTC	3 cut(s)	341, 1088, 1325
BstMBI	GATC	7 cut(s)	27, 154, 292, 381, 414, 597, 1365
BstMCI	CGRYCG	2 cut(s)	417, 1391
BstMWI	GCNNNNNNNGC	7 cut(s)	282, 342, 366, 756, 1057, 1313, 1406
BstNI	CCWGG	1 cut(s)	220
BstNSI	RCATGY	2 cut(s)	1255, 1331
BstSCI	CCNGG	2 cut(s)	218, 285
BstSLI	GKGCMC	2 cut(s)	621, 641
BstUI	CGCG	3 cut(s)	239, 338, 562
BstV1I	GCAGC	4 cut(s)	333, 1018, 1069, 1386
BstX2I	RGATCY	1 cut(s)	381
BstXI	CCANNNNNNTGG	1 cut(s)	969
BstYI	RGATCY	1 cut(s)	381
BstZ17I	GTATAC	1 cut(s)	1496
BstZI	CGGCCG	1 cut(s)	1388
Bsu36I	CCTNAGG	2 cut(s)	353, 1078
BsuRI	GGCC	6 cut(s)	196, 260, 763, 786, 1277, 1390
BtgI	CCRYGG	2 cut(s)	191, 1353
BtrI	CACGTC	1 cut(s)	1130
BtsCI	GGATG	3 cut(s)	393, 442, 1123
BtsIMutI	CAGTG	6 cut(s)	639, 641, 744, 927, 1053, 1418
BveI	ACCTGC	1 cut(s)	1307
Cac8I	GCNNGC	2 cut(s)	761, 1074
CfoI	GCGC	1 cut(s)	338
Cfr10I	RCCGGY	1 cut(s)	759
Cfr13I	GGNCC	4 cut(s)	222, 860, 1275, 1503
CviAII	CATG	9 cut(s)	192, 767, 813, 878, 912, 1252, 1310, 1328, 1433
DdeI	CTNAG	8 cut(s)	186, 353, 642, 1008, 1078, 1228, 1487, 1499
DpnI	GATC	7 cut(s)	29, 156, 294, 383, 416, 599, 1367
DpnII	GATC	7 cut(s)	27, 154, 292, 381, 414, 597, 1365
DraIII	CACNNNGTG	1 cut(s)	645
EaeI	YGGCCR	3 cut(s)	194, 784, 1388
EagI	CGGCCG	1 cut(s)	1388
Eam1104I	CTCTTC	1 cut(s)	47
EarI	CTCTTC	1 cut(s)	47
Ecl136II	GAGCTC	1 cut(s)	360
EclXI	CGGCCG	1 cut(s)	1388
Eco130I	CCWWGG	2 cut(s)	191, 1507
Eco147I	AGGCCT	1 cut(s)	260
Eco24I	GRGCYC	2 cut(s)	362, 927
Eco31I	GGTCTC	3 cut(s)	341, 1088, 1325
Eco47I	GGWCC	3 cut(s)	222, 860, 1503
Eco52I	CGGCCG	1 cut(s)	1388
Eco53kI	GAGCTC	1 cut(s)	360
Eco57I	CTGAAG	2 cut(s)	44, 951
Eco81I	CCTNAGG	2 cut(s)	353, 1078
EcoICRI	GAGCTC	1 cut(s)	360
EcoO109I	RGGNCCY	1 cut(s)	1503
EcoRI	GAATTC	1 cut(s)	1041
EcoRII	CCWGG	1 cut(s)	218
EcoT14I	CCWWGG	2 cut(s)	191, 1507
EcoT38I	GRGCYC	2 cut(s)	362, 927
ErhI	CCWWGG	2 cut(s)	191, 1507
FaeI	CATG	9 cut(s)	195, 770, 816, 881, 915, 1255, 1313, 1331, 1436
FatI	CATG	9 cut(s)	191, 766, 812, 877, 911, 1251, 1309, 1327, 1432
FauI	CCCGC	2 cut(s)	290, 1441
FblI	GTMKAC	1 cut(s)	1495
Fnu4HI	GCNGC	7 cut(s)	322, 421, 560, 1032, 1058, 1375, 1391
FokI	GGATG	3 cut(s)	400, 449, 1110
FriOI	GRGCYC	2 cut(s)	362, 927
Fsp4HI	GCNGC	7 cut(s)	322, 421, 560, 1032, 1058, 1375, 1391
FspBI	CTAG	2 cut(s)	756, 831
GlaI	GCGC	1 cut(s)	337
GluI	GCNGC	7 cut(s)	322, 421, 560, 1032, 1058, 1375, 1391
GsaI	CCCAGC	1 cut(s)	1198
GsuI	CTGGAG	1 cut(s)	1382
HaeIII	GGCC	6 cut(s)	196, 260, 763, 786, 1277, 1390
HapII	CCGG	7 cut(s)	286, 318, 331, 385, 395, 470, 760
HhaI	GCGC	1 cut(s)	338
Hin1II	CATG	9 cut(s)	195, 770, 816, 881, 915, 1255, 1313, 1331, 1436
Hin6I	GCGC	1 cut(s)	336
HinP1I	GCGC	1 cut(s)	336
HinfI	GANTC	6 cut(s)	314, 532, 607, 741, 1148, 1204
HpaII	CCGG	7 cut(s)	286, 318, 331, 385, 395, 470, 760
HphI	GGTGA	5 cut(s)	271, 415, 578, 682, 882
Hpy166II	GTNNAC	3 cut(s)	639, 1234, 1496
Hpy188I	TCNGA	2 cut(s)	1009, 1471
Hpy188III	TCNNGA	7 cut(s)	22, 385, 536, 545, 738, 1283, 1361
Hpy8I	GTNNAC	3 cut(s)	639, 1234, 1496
HpyAV	CCTTC	1 cut(s)	1411
HpyCH4III	ACNGT	5 cut(s)	485, 678, 1005, 1136, 1354
HpyCH4IV	ACGT	1 cut(s)	1129
HpyCH4V	TGCA	9 cut(s)	639, 689, 911, 959, 998, 1218, 1247, 1316, 1340
HpyF10VI	GCNNNNNNNGC	7 cut(s)	282, 342, 366, 756, 1057, 1313, 1406
HpyF3I	CTNAG	8 cut(s)	186, 353, 642, 1008, 1078, 1228, 1487, 1499
HpySE526I	ACGT	1 cut(s)	1129
Hsp92II	CATG	9 cut(s)	195, 770, 816, 881, 915, 1255, 1313, 1331, 1436
HspAI	GCGC	1 cut(s)	336
Kpn2I	TCCGGA	1 cut(s)	384
KroI	GCCGGC	1 cut(s)	759
KroNI	GCCGGC	1 cut(s)	761
Kzo9I	GATC	7 cut(s)	27, 154, 292, 381, 414, 597, 1365
LmnI	GCTCC	6 cut(s)	24, 254, 357, 592, 655, 950
Lsp1109I	GCAGC	4 cut(s)	333, 1018, 1069, 1386
LweI	GCATC	3 cut(s)	1132, 1171, 1276
MaeI	CTAG	2 cut(s)	756, 831
MaeII	ACGT	1 cut(s)	1129
MaeIII	GTNAC	3 cut(s)	670, 742, 1130
MalI	GATC	7 cut(s)	29, 156, 294, 383, 416, 599, 1367
MbiI	CCGCTC	1 cut(s)	249
MboI	GATC	7 cut(s)	27, 154, 292, 381, 414, 597, 1365
MboII	GAAGA	6 cut(s)	34, 37, 418, 818, 944, 1121
MfeI	CAATTG	1 cut(s)	800
MflI	RGATCY	1 cut(s)	381
MhlI	GDGCHC	5 cut(s)	362, 621, 641, 927, 1309
MlsI	TGGCCA	2 cut(s)	196, 786
MluCI	AATT	3 cut(s)	800, 1041, 1404
MluNI	TGGCCA	2 cut(s)	196, 786
MlyI	GAGTC	2 cut(s)	541, 750
MmeI	TCCRAC	1 cut(s)	1404
Mox20I	TGGCCA	2 cut(s)	196, 786
MroI	TCCGGA	1 cut(s)	384
MroNI	GCCGGC	1 cut(s)	759
MroXI	GAANNNNTTC	1 cut(s)	1269
MscI	TGGCCA	2 cut(s)	196, 786
MseI	TTAA	4 cut(s)	918, 1157, 1187, 1403
MslI	CAYNNNNRTG	2 cut(s)	981, 1256
Msp20I	TGGCCA	2 cut(s)	196, 786
MspA1I	CMGCKG	1 cut(s)	324
MspI	CCGG	7 cut(s)	286, 318, 331, 385, 395, 470, 760
MspR9I	CCNGG	2 cut(s)	220, 287
MunI	CAATTG	1 cut(s)	800
Mva1269I	GAATGC	1 cut(s)	1220
MvaI	CCWGG	1 cut(s)	220
MvnI	CGCG	3 cut(s)	239, 338, 562
MwoI	GCNNNNNNNGC	7 cut(s)	282, 342, 366, 756, 1057, 1313, 1406
NaeI	GCCGGC	1 cut(s)	761
NciI	CCSGG	1 cut(s)	287
NcoI	CCATGG	1 cut(s)	191
NdeII	GATC	7 cut(s)	27, 154, 292, 381, 414, 597, 1365
NgoMIV	GCCGGC	1 cut(s)	759
NlaIII	CATG	9 cut(s)	195, 770, 816, 881, 915, 1255, 1313, 1331, 1436
NlaIV	GGNNCC	7 cut(s)	20, 224, 329, 383, 393, 657, 1505
NmuCI	GTSAC	3 cut(s)	670, 742, 1130
NspI	RCATGY	2 cut(s)	1255, 1331
NspV	TTCGAA	1 cut(s)	478
PceI	AGGCCT	1 cut(s)	260
PciI	ACATGT	1 cut(s)	1251
PctI	GAATGC	1 cut(s)	1220
PdiI	GCCGGC	1 cut(s)	761
PdmI	GAANNNNTTC	1 cut(s)	1269
PfeI	GAWTC	4 cut(s)	314, 607, 1148, 1204
PkrI	GCNGC	7 cut(s)	323, 422, 561, 1033, 1059, 1376, 1392
Ple19I	CGATCG	1 cut(s)	417
PleI	GAGTC	2 cut(s)	540, 749
PpsI	GAGTC	2 cut(s)	540, 749
PpuMI	RGGWCCY	1 cut(s)	1503
PscI	ACATGT	1 cut(s)	1251
Psp124BI	GAGCTC	1 cut(s)	362
Psp5II	RGGWCCY	1 cut(s)	1503
Psp6I	CCWGG	1 cut(s)	218
PspFI	CCCAGC	1 cut(s)	1194
PspGI	CCWGG	1 cut(s)	218
PspN4I	GGNNCC	7 cut(s)	20, 224, 329, 383, 393, 657, 1505
PspPI	GGNCC	4 cut(s)	222, 860, 1275, 1503
PspPPI	RGGWCCY	1 cut(s)	1503
PsuI	RGATCY	1 cut(s)	381
PvuI	CGATCG	1 cut(s)	417
PvuII	CAGCTG	1 cut(s)	324
RseI	CAYNNNNRTG	2 cut(s)	981, 1256
SacI	GAGCTC	1 cut(s)	362
SaqAI	TTAA	4 cut(s)	918, 1157, 1187, 1403
SatI	GCNGC	7 cut(s)	322, 421, 560, 1032, 1058, 1375, 1391
Sau3AI	GATC	7 cut(s)	27, 154, 292, 381, 414, 597, 1365
Sau96I	GGNCC	4 cut(s)	222, 860, 1275, 1503
SchI	GAGTC	2 cut(s)	541, 750
ScrFI	CCNGG	2 cut(s)	220, 287
SduI	GDGCHC	5 cut(s)	362, 621, 641, 927, 1309
SfaNI	GCATC	3 cut(s)	1132, 1171, 1276
SfuI	TTCGAA	1 cut(s)	478
SinI	GGWCC	3 cut(s)	222, 860, 1503
SmiMI	CAYNNNNRTG	2 cut(s)	981, 1256
SmlI	CTYRAG	1 cut(s)	299
SmoI	CTYRAG	1 cut(s)	299
Sse9I	AATT	3 cut(s)	800, 1041, 1404
SseBI	AGGCCT	1 cut(s)	260
SspMI	CTAG	2 cut(s)	756, 831
SstI	GAGCTC	1 cut(s)	362
StuI	AGGCCT	1 cut(s)	260
StyD4I	CCNGG	2 cut(s)	218, 285
StyI	CCWWGG	2 cut(s)	191, 1507
TaaI	ACNGT	5 cut(s)	485, 678, 1005, 1136, 1354
TaiI	ACGT	1 cut(s)	1132
TaqI	TCGA	8 cut(s)	291, 413, 478, 498, 535, 605, 1202, 1256
TasI	AATT	3 cut(s)	800, 1041, 1404
TauI	GCSGC	3 cut(s)	423, 562, 1393
TfiI	GAWTC	4 cut(s)	314, 607, 1148, 1204
Tru1I	TTAA	4 cut(s)	918, 1157, 1187, 1403
Tru9I	TTAA	4 cut(s)	918, 1157, 1187, 1403
TscAI	CASTG	6 cut(s)	641, 646, 751, 934, 1053, 1418
TseFI	GTSAC	3 cut(s)	670, 742, 1130
TseI	GCWGC	4 cut(s)	321, 1031, 1057, 1374
Tsp45I	GTSAC	3 cut(s)	670, 742, 1130
TspDTI	ATGAA	3 cut(s)	17, 918, 1274
TspGWI	ACGGA	3 cut(s)	725, 1251, 1455
TspRI	CASTG	6 cut(s)	641, 646, 751, 934, 1053, 1418
VneI	GTGCAC	1 cut(s)	637
VpaK11BI	GGWCC	3 cut(s)	222, 860, 1503
XapI	RAATTY	1 cut(s)	1041
XceI	RCATGY	2 cut(s)	1255, 1331
XmiI	GTMKAC	1 cut(s)	1495
XmnI	GAANNNNTTC	1 cut(s)	1269
XspI	CTAG	2 cut(s)	756, 831

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.