AT5G37170
ERF Family

Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O- methyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0005581
Physical Location & Seq
Forward (+)
14712734 .. 14714551
1818 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G37170.2

Sequence Viewer

Length: 1005 bp
ATGACAAACCATCATCAAGAGTCCTTAACCACTTACCCTAAACCGGGTCCAACCAGAGAACAAGAACAAGTTGACGAAGAAATGATGAGCATGCAAATGCAAGCGTTGAGGATCACAAACTCATTGGCTTTTCCCATGGGCGTATGGCTCTCGCCTTCCGAGATAGCTTTTGGTCTCCCTACCAAGCCTACCAACCCAGAGGCACCGATGTTGATAGACCGTATGTTACGGTTACTCGTCAGCCACTCGATCTTGAAATGTCGTTTAGTTGAAACCGGAGAAAACAATCGAACCGAAAGTACCCAAAGGGTATATGCAGCGGAACCGGACACATCTGAAGGATGTGATACACGAAGAAAAAGATGCATTCAGTTCTGCCCATGGCATGGGACTCTACGAATACGTTGTACGGACGAACAATTCGCTGCTATATTTAACCAGGCAATGTCAGATTCCTCTACCATGATCATGACGAAGATTTTAGAAGTTTACAAAGGATTAAAAGATGTAAATACTTTAGTTGATATTGGAGGAGGACTTGGCACCATTCTAAATCTTGTCATTTCGTCCAAGTATCCTCAAATTAAGGGTATCAATTTCGATCTAGCCGCAGTTTTAGCCACTGCTCCTTCTTATCCCGGAGTTGAGCATGTACCCGGAGATATGTTTATAGACGTTCCAAAAGGAGATGCAATCTTCATGAGGCGGATATTACGTGACTGGAACGACAAAGATTGTGTAAAGATATTAACAAATTGTTGGAAGAGTCTTCCGGAAAAGGGAAAAGTTATAATAGTTGACATGGTTGCACCATCAGAACCAAAGAGTGACGACATTTTCTCTAAGGTTGTCTTTGGTACGGACATGTTGATGTTAACACAATGTTCGTGTGGTAAAGTGAGGTCTTTTGCTCAGTTTGAAGCTTTAGCCTCTGCTTCAGGTTTTCATAAATGTGAAGTAAGTGGTCTTGCTTATACATATTCTGTTATCGAATTCCACAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Dimerisation Methyltransf_2

Protein Analysis

334

Amino Acids

37.32

Weight (kDa)

6.19

Isoelectric Point (pI)

38.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Methyltransf_2 PF00891 33 - 215 6.1e-49 O-methyltransferase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 791
AccB1I GGYRCC 2 cut(s) 202, 542
AccB7I CCANNNNNTGG 1 cut(s) 386
AccIII TCCGGA 1 cut(s) 772
AciI CCGC 3 cut(s) 320, 609, 706
AclWI GGATC 1 cut(s) 119
AcsI RAATTY 1 cut(s) 992
AcuI CTGAAG 2 cut(s) 357, 921
AfaI GTAC 4 cut(s) 301, 409, 654, 859
AfiI CCNNNNNNNGG 4 cut(s) 43, 44, 386, 779
AflIII ACRYGT 1 cut(s) 864
AgsI TTSAA 3 cut(s) 256, 272, 920
AjnI CCWGG 1 cut(s) 438
AluBI AGCT 2 cut(s) 167, 923
AluI AGCT 2 cut(s) 167, 923
Alw26I GTCTC 1 cut(s) 179
AlwI GGATC 1 cut(s) 119
Aor13HI TCCGGA 1 cut(s) 772
ApeKI GCWGC 2 cut(s) 317, 425
ApoI RAATTY 1 cut(s) 992
ArsI GACNNNNNNTTYG 2 cut(s) 404, 436
AspS9I GGNCC 1 cut(s) 47
AsuC2I CCSGG 3 cut(s) 45, 639, 657
AvaII GGWCC 1 cut(s) 47
BanI GGYRCC 2 cut(s) 202, 542
BbsI GAAGAC 1 cut(s) 761
BbvI GCAGC 2 cut(s) 329, 412
BccI CCATC 2 cut(s) 18, 820
BciT130I CCWGG 1 cut(s) 440
BciVI GTATCC 1 cut(s) 585
BclI TGATCA 1 cut(s) 465
BcnI CCSGG 3 cut(s) 45, 639, 657
BcoDI GTCTC 1 cut(s) 179
BfaI CTAG 1 cut(s) 605
BfuI GTATCC 1 cut(s) 585
BisI GCNGC 3 cut(s) 318, 426, 609
BlsI GCNGC 3 cut(s) 319, 427, 610
Bme1390I CCNGG 4 cut(s) 45, 440, 639, 657
Bme18I GGWCC 1 cut(s) 47
BmgT120I GGNCC 1 cut(s) 47
BmiI GGNNCC 4 cut(s) 48, 204, 324, 544
BmrFI CCNGG 4 cut(s) 45, 440, 639, 657
BmsI GCATC 2 cut(s) 353, 679
BpiI GAAGAC 1 cut(s) 761
BpuMI CCSGG 3 cut(s) 45, 639, 657
BsaAI YACGTR 1 cut(s) 716
BsaI GGTCTC 1 cut(s) 179
BsaJI CCNNGG 2 cut(s) 135, 380
BsaWI WCCGGW 3 cut(s) 275, 325, 772
Bsc4I CCNNNNNNNGG 4 cut(s) 43, 44, 386, 779
Bse1I ACTGG 1 cut(s) 725
Bse3DI GCAATG 1 cut(s) 450
BseAI TCCGGA 1 cut(s) 772
BseBI CCWGG 1 cut(s) 440
BseDI CCNNGG 2 cut(s) 135, 380
BseGI GGATG 1 cut(s) 347
BseLI CCNNNNNNNGG 4 cut(s) 43, 44, 386, 779
BseMI GCAATG 1 cut(s) 450
BseMII CTCAG 1 cut(s) 926
BseNI ACTGG 1 cut(s) 725
BseRI GAGGAG 1 cut(s) 546
BseXI GCAGC 2 cut(s) 329, 412
BshNI GGYRCC 2 cut(s) 202, 542
BsiSI CCGG 6 cut(s) 44, 276, 326, 639, 657, 773
BslFI GGGAC 1 cut(s) 403
BslI CCNNNNNNNGG 4 cut(s) 43, 44, 386, 779
BsmAI GTCTC 1 cut(s) 179
BsmFI GGGAC 1 cut(s) 403
BsmI GAATGC 1 cut(s) 366
Bso31I GGTCTC 1 cut(s) 179
Bsp13I TCCGGA 1 cut(s) 772
Bsp143I GATC 4 cut(s) 111, 249, 465, 601
Bsp19I CCATGG 2 cut(s) 135, 380
BspACI CCGC 3 cut(s) 320, 609, 706
BspCNI CTCAG 1 cut(s) 925
BspEI TCCGGA 1 cut(s) 772
BspHI TCATGA 2 cut(s) 468, 699
BspLI GGNNCC 4 cut(s) 48, 204, 324, 544
BspPI GGATC 1 cut(s) 119
BspT107I GGYRCC 2 cut(s) 202, 542
BspTNI GGTCTC 1 cut(s) 179
BsrDI GCAATG 1 cut(s) 450
BsrI ACTGG 1 cut(s) 725
BssECI CCNNGG 2 cut(s) 135, 380
BssMI GATC 4 cut(s) 111, 249, 465, 601
BssT1I CCWWGG 2 cut(s) 135, 380
Bst2UI CCWGG 1 cut(s) 440
Bst4CI ACNGT 2 cut(s) 221, 231
Bst6I CTCTTC 1 cut(s) 758
BstBAI YACGTR 1 cut(s) 716
BstC8I GCNNGC 2 cut(s) 92, 102
BstDEI CTNAG 2 cut(s) 843, 912
BstDSI CCRYGG 2 cut(s) 135, 380
BstF5I GGATG 1 cut(s) 347
BstKTI GATC 4 cut(s) 114, 252, 468, 604
BstMAI GTCTC 1 cut(s) 179
BstMBI GATC 4 cut(s) 111, 249, 465, 601
BstMWI GCNNNNNNNGC 1 cut(s) 617
BstNI CCWGG 1 cut(s) 440
BstNSI RCATGY 3 cut(s) 94, 653, 868
BstSCI CCNGG 4 cut(s) 43, 438, 637, 655
BstV1I GCAGC 2 cut(s) 329, 412
BstV2I GAAGAC 1 cut(s) 761
BsuI GTATCC 1 cut(s) 585
BtgI CCRYGG 2 cut(s) 135, 380
BtsCI GGATG 1 cut(s) 347
BtsI GCAGTG 1 cut(s) 621
BtsIMutI CAGTG 1 cut(s) 621
Cac8I GCNNGC 2 cut(s) 92, 102
CciI TCATGA 2 cut(s) 468, 699
Cfr13I GGNCC 1 cut(s) 47
Csp6I GTAC 4 cut(s) 300, 408, 653, 858
CviJI RGCY 9 cut(s) 128, 148, 167, 187, 243, 608, 620, 923, 929
CviKI_1 RGCY 9 cut(s) 128, 148, 167, 187, 243, 608, 620, 923, 929
CviQI GTAC 4 cut(s) 300, 408, 653, 858
DdeI CTNAG 2 cut(s) 843, 912
DpnI GATC 4 cut(s) 113, 251, 467, 603
DpnII GATC 4 cut(s) 111, 249, 465, 601
Eam1104I CTCTTC 1 cut(s) 758
EarI CTCTTC 1 cut(s) 758
EciI GGCGGA 1 cut(s) 721
Eco130I CCWWGG 2 cut(s) 135, 380
Eco31I GGTCTC 1 cut(s) 179
Eco47I GGWCC 1 cut(s) 47
Eco57I CTGAAG 2 cut(s) 357, 921
EcoRI GAATTC 1 cut(s) 992
EcoRII CCWGG 1 cut(s) 438
EcoT14I CCWWGG 2 cut(s) 135, 380
EcoT22I ATGCAT 1 cut(s) 368
ErhI CCWWGG 2 cut(s) 135, 380
FalI AAGNNNNNCTT 2 cut(s) 836, 868
FaqI GGGAC 1 cut(s) 403
FbaI TGATCA 1 cut(s) 465
Fnu4HI GCNGC 3 cut(s) 318, 426, 609
FokI GGATG 1 cut(s) 354
Fsp4HI GCNGC 3 cut(s) 318, 426, 609
FspBI CTAG 1 cut(s) 605
GluI GCNGC 3 cut(s) 318, 426, 609
HapII CCGG 6 cut(s) 44, 276, 326, 639, 657, 773
HincII GTYRAC 3 cut(s) 73, 799, 876
HindII GTYRAC 3 cut(s) 73, 799, 876
HindIII AAGCTT 1 cut(s) 921
HinfI GANTC 4 cut(s) 20, 391, 452, 766
HpaI GTTAAC 1 cut(s) 876
HpaII CCGG 6 cut(s) 44, 276, 326, 639, 657, 773
Hpy166II GTNNAC 4 cut(s) 73, 490, 799, 876
Hpy188I TCNGA 4 cut(s) 160, 337, 451, 817
Hpy188III TCNNGA 5 cut(s) 17, 253, 469, 700, 773
Hpy8I GTNNAC 4 cut(s) 73, 490, 799, 876
HpyAV CCTTC 3 cut(s) 165, 332, 639
HpyCH4III ACNGT 2 cut(s) 221, 231
HpyCH4IV ACGT 3 cut(s) 403, 675, 715
HpyCH4V TGCA 6 cut(s) 94, 100, 317, 366, 692, 809
HpyF10VI GCNNNNNNNGC 1 cut(s) 617
HpyF3I CTNAG 2 cut(s) 843, 912
HpySE526I ACGT 3 cut(s) 403, 675, 715
Kpn2I TCCGGA 1 cut(s) 772
Ksp22I TGATCA 1 cut(s) 465
KspAI GTTAAC 1 cut(s) 876
Kzo9I GATC 4 cut(s) 111, 249, 465, 601
LmnI GCTCC 1 cut(s) 631
Lsp1109I GCAGC 2 cut(s) 329, 412
LweI GCATC 2 cut(s) 353, 679
MaeI CTAG 1 cut(s) 605
MaeII ACGT 3 cut(s) 403, 675, 715
MaeIII GTNAC 4 cut(s) 225, 231, 716, 827
MalI GATC 4 cut(s) 113, 251, 467, 603
MboI GATC 4 cut(s) 111, 249, 465, 601
MboII GAAGA 6 cut(s) 89, 366, 487, 688, 761, 775
MluCI AATT 5 cut(s) 419, 582, 595, 754, 992
MlyI GAGTC 3 cut(s) 29, 385, 775
MmeI TCCRAC 2 cut(s) 74, 740
MnlI CCTC 9 cut(s) 102, 193, 466, 524, 527, 588, 696, 894, 940
Mph1103I ATGCAT 1 cut(s) 368
MroI TCCGGA 1 cut(s) 772
MseI TTAA 6 cut(s) 26, 435, 500, 585, 749, 875
MslI CAYNNNNRTG 4 cut(s) 95, 467, 869, 951
MspA1I CMGCKG 1 cut(s) 320
MspI CCGG 6 cut(s) 44, 276, 326, 639, 657, 773
MspR9I CCNGG 4 cut(s) 45, 440, 639, 657
Mva1269I GAATGC 1 cut(s) 366
MvaI CCWGG 1 cut(s) 440
MwoI GCNNNNNNNGC 1 cut(s) 617
NciI CCSGG 3 cut(s) 45, 639, 657
NcoI CCATGG 2 cut(s) 135, 380
NdeII GATC 4 cut(s) 111, 249, 465, 601
NlaIV GGNNCC 4 cut(s) 48, 204, 324, 544
NmuCI GTSAC 2 cut(s) 716, 827
NsiI ATGCAT 1 cut(s) 368
NspI RCATGY 3 cut(s) 94, 653, 868
PaeI GCATGC 1 cut(s) 94
PagI TCATGA 2 cut(s) 468, 699
PciI ACATGT 1 cut(s) 864
PctI GAATGC 1 cut(s) 366
PfeI GAWTC 1 cut(s) 452
PflMI CCANNNNNTGG 1 cut(s) 386
PfoI TCCNGGA 1 cut(s) 637
PkrI GCNGC 3 cut(s) 319, 427, 610
PleI GAGTC 3 cut(s) 28, 385, 774
PpsI GAGTC 3 cut(s) 28, 385, 774
Ppu21I YACGTR 1 cut(s) 716
PscI ACATGT 1 cut(s) 864
PsiI TTATAA 1 cut(s) 791
Psp6I CCWGG 1 cut(s) 438
PspGI CCWGG 1 cut(s) 438
PspN4I GGNNCC 4 cut(s) 48, 204, 324, 544
PspPI GGNCC 1 cut(s) 47
PsrI GAACNNNNNNTAC 2 cut(s) 283, 315
RsaI GTAC 4 cut(s) 301, 409, 654, 859
RsaNI GTAC 4 cut(s) 300, 408, 653, 858
RseI CAYNNNNRTG 4 cut(s) 95, 467, 869, 951
SaqAI TTAA 6 cut(s) 26, 435, 500, 585, 749, 875
SatI GCNGC 3 cut(s) 318, 426, 609
Sau3AI GATC 4 cut(s) 111, 249, 465, 601
Sau96I GGNCC 1 cut(s) 47
SchI GAGTC 3 cut(s) 29, 385, 775
ScrFI CCNGG 4 cut(s) 45, 440, 639, 657
SetI ASST 8 cut(s) 169, 406, 678, 718, 849, 905, 925, 943
SfaNI GCATC 2 cut(s) 353, 679
SinI GGWCC 1 cut(s) 47
SmiMI CAYNNNNRTG 4 cut(s) 95, 467, 869, 951
SphI GCATGC 1 cut(s) 94
Sse9I AATT 5 cut(s) 419, 582, 595, 754, 992
SsiI CCGC 3 cut(s) 320, 609, 706
SspMI CTAG 1 cut(s) 605
StyD4I CCNGG 4 cut(s) 43, 438, 637, 655
StyI CCWWGG 2 cut(s) 135, 380
TaaI ACNGT 2 cut(s) 221, 231
TaiI ACGT 3 cut(s) 406, 678, 718
TaqI TCGA 4 cut(s) 248, 289, 600, 990
TasI AATT 5 cut(s) 419, 582, 595, 754, 992
TauI GCSGC 1 cut(s) 611
TfiI GAWTC 1 cut(s) 452
Tru1I TTAA 6 cut(s) 26, 435, 500, 585, 749, 875
Tru9I TTAA 6 cut(s) 26, 435, 500, 585, 749, 875
TscAI CASTG 1 cut(s) 628
TseFI GTSAC 2 cut(s) 716, 827
TseI GCWGC 2 cut(s) 317, 425
Tsp45I GTSAC 2 cut(s) 716, 827
TspDTI ATGAA 2 cut(s) 688, 935
TspGWI ACGGA 2 cut(s) 425, 875
TspRI CASTG 1 cut(s) 628
Van91I CCANNNNNTGG 1 cut(s) 386
VpaK11BI GGWCC 1 cut(s) 47
XapI RAATTY 1 cut(s) 992
XceI RCATGY 3 cut(s) 94, 653, 868
XspI CTAG 1 cut(s) 605
Zsp2I ATGCAT 1 cut(s) 368
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.