Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002442

Physical Location & Seq

Genomic Coordinates Reverse (-)

16301846 .. 16306479

Gene Structure 4634 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G40740.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2226 bp

ATGACGATGGACAGAGAAAAGGAGAGAGAACTTGAGCTCGAGAGTGCAATGTACACAAACTGTTTGCTTTTAGGTTTGGATCCGAATGTGATCGGACTCGGAGCCTCCAATGGCACGCCTCGGGTCGGGTTATTTCGCCATTCGAATCCAAAGCTCGGTGAACAGCTTCTCTACTTCATCCTCTCTTCTCTTCGTGGCCCTGCTCAGTCTTCAAAGGATTTTGATAAGGTTTGGCCAATTTTCGATTCGGCTCAATCTCGCGATTTTCGTAAGGTTGTTCAAGCGATTATAAGCGAGCTTGAATCACAAGGGGCATTACCAAGGAGTAATTCGAGGGTTTCATCACTAGCCACTTGCTGTGGACCAAGATTTGTGGAGCTCTTGTGGCAACTTTCACTGCATGCGTTAAGAGAAGTTCATAGGCGGACATTTCCTGCTGATGTAGCTTCCAATCCTCTACCTTCTTCTCTAACTGACGTTTCTTTCTCACATGCAGCTACTTTGCTTCCTGTAACCAAGGCCCGGATAGTGCTTGAGCGCCGTCGGTTTCTTAAAAATGCAGAGACTGCGGTACAAAGACAGGCCATGTGGTCTAATTTAGCCCATGAGATGACTGCAGAGTTCCGTGGTCTCTGTGCTGAAGAGGCTTACCTTCAACAGGAACTAGAGAAACTTAACGATTTGAGAAACAAAGTGAAGCAGGAAGGAGAAGTGTGGGATGACCTTGTGTCTAGCTCCAGTCAGAATTCTCATCTAGTTTCAAAGGCAACTAGGTTATGGGATTCTATAATGGCTCGTAAAGGTCAGCATGAAGTTCTTGCGTCAGGTCCCATTGAGGACTTGATAGCTCACAGGGAGCATAGATACCGGATTTCAGGATCGGCCCTACTTGCAGCGATGGATCAGAGTTCTCAAGTTCCTCGAGCAGAATTACTCTCTGCCCACTCAGATGATTCAGCTTCACTTGCGGATGACAAAGAACTAAGTGATGGATCGTACACAAACATGCATGACCACTCTTTAGTAGATAGTTTTGAAACAGCCAGCTCACAAGCAAGTGATGAAACACTTTCTCGAGTAGATGATAGAGGTGGAAAGATCAATCAGACAGTCGATGTAGCGGAAGTCATAAGGCGCTGGACACATGCATTACAGCGTATTCATAAACAGTCTCTTCTTCTGGCTAAAGCAAATGATGGGGATGGTCCAGATATTTTGCGGACTGCGAGTGATGGTGGTACAAGTGGGCATGTTGAATCATTGGCTGCAACTTTGACTGAACATCAACAACATTTAGCTAGCTTTCAGGTTCTTATCAACCAATTAAAGGAAGTTTCTCCAGCCATACAAAAGTCCATATCGGAATGTACTGAGATGGTTAATAGTCTTCCCCCAACCTTGCCTCCAGTTACGAGAAGTAATGGACAAGCATCTTCACTTCTACAATCTCAGGGCAGTGGGAGAATTATGGAAGGTGTATCAAATGATGTTGCTGAGCTGACCTCGACAATGTCTAATGTTCAGCTCGAGAAAGTCTCAGCTAGTCCTACATTAAAGCTTCCACAGTTATTTAGTTCCACTCCTACTTCTTCTGGTAAAGGAGGAAATGGACAAAAGCGACAGACAATGGCTTCCCAGGTCAATAAAATGGAAAGCTTGTCTGAGAAGAACTCTACAGACCAAGCACTATCAAATGCTCGACCAGACAACTTACCGACTGATACAAGCAGTTCTTTTGTCCATAACCTGAAGAAATCTGTGAGGGAAGCGGCTTTATTGATTCCTTCTTCAGCAGGCTCATCACGGGATAGTCAATCCGATGAGGGCTCCGAGCATTATTTTGTACCTCTTTCAGCAACTGGCTTTTCCCGTTTTCCATCAGAAACCAAAGCCCTGCCTCTCAGAGGGTCGAGAGCACTTACCTCTCTGAGCGAGCCTTCGTTTCTTGAACCCAATGTTCCCGATAGCTTTGCACCAAGCAAGTACAGCGATATACCTGACACGTATGATGATCTTGATTCATTCAAAGATTACGATAATGGGAACGGGTTTCTGTCGGTTGCTGGATCAAACAGTGTAGCTTCTGATGCACAACAATCATTTTACGATATTGATGATCAAGTATTTTCCCCACCTTTACTAATGGACTCATCCCTATTATCAGATGCCTATGAAGACTTGTTAGCTCCTCTTTCAGAAACCGAAGCCGCTTTAATGGAGCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005819 GO:0005856 GO:0006996 GO:0007010 GO:0007017 GO:0007275 GO:0008017 GO:0008092 GO:0008150 GO:0009524 GO:0009553 GO:0009555 GO:0009561 GO:0009987 GO:0015630 GO:0015631 GO:0016043 GO:0032501 GO:0032502 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0048229 GO:0048856 GO:0051011 GO:0055046 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HAUS6_N

Protein Analysis

741

Amino Acids

80.93

Weight (kDa)

5.19

Isoelectric Point (pI)

49.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HAUS6_N	PF14661	17 - 260	1.2e-43	HAUS augmin-like complex subunit 6 N-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002442)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G40740
fragaria_vesca	FvH4_6g52640 FvH4_6g52640 FvH4_6g52640 FvH4_6g52640 FvH4_6g52640 FvH4_6g52640
malus_domestica	MD09G1017400.v1.1 MD17G1018200.v1.1
prunus_persica	Prupe.3G299500_v2.0.a1 Prupe.3G299500_v2.0.a1
pyrus_communis	pycom111g01430 pycom17g01460 pycom17g01470
rosa_chinensis	RchiOBHm_Chr2g0096321 RchiOBHm_Chr2g0166591 RchiOBHm_Chr2g0174171 RchiOBHm_Chr5g0045391 RchiOBHm_Chr6g0248711
rosa_laevigata	RLG00000022253
rosa_multiflora	Rmu_sc0002045.1_g000024 Rmu_ssc0000100.1_g000024 Rmu_ssc0000198.1_g000004
rosa_roxburghii	Rroxscaffold_2G00078390 Rroxscaffold_3G00231180
rosa_rugosa	Rorug02G0575600 Rorug02G0575600
rosa_samantha	Rh2AG655000 Rh2BG666200 Rh2CG630400 Rh2DG680800 Rh4CG097900 Rh5BG312100 Rh5BG536100 Rh5BG536300 Rh5CG559500 Rh5DG322800 Rh6CG160100
rosa_wichuraiana	Rw2G053760 Rw6G003620 Rw7G025810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	290
AccII	CGCG	1 cut(s)	261
AciI	CCGC	7 cut(s)	424, 569, 968, 1121, 1219, 1769, 2208
AclWI	GGATC	6 cut(s)	74, 87, 886, 909, 1000, 2074
AcoI	YGGCCR	1 cut(s)	233
AcsI	RAATTY	1 cut(s)	745
AcuI	CTGAAG	3 cut(s)	660, 1769, 1773
AfaI	GTAC	7 cut(s)	53, 573, 998, 1240, 1369, 1845, 1985
AfiI	CCNNNNNNNGG	6 cut(s)	125, 155, 522, 658, 1327, 1904
AflIII	ACRYGT	1 cut(s)	2001
AgsI	TTSAA	9 cut(s)	213, 281, 302, 656, 762, 1037, 1256, 1949, 2026
AhdI	GACNNNNNGTC	1 cut(s)	727
AjnI	CCWGG	1 cut(s)	1635
AjuI	GAANNNNNNNTTGG	4 cut(s)	229, 261, 313, 345
Alw21I	GWGCWC	3 cut(s)	39, 381, 1918
Alw26I	GTCTC	4 cut(s)	557, 635, 1176, 1540
AlwI	GGATC	6 cut(s)	74, 87, 886, 909, 1000, 2074
AlwNI	CAGNNNCTG	2 cut(s)	566, 1859
Ama87I	CYCGRG	5 cut(s)	38, 120, 921, 1074, 1526
AoxI	GGCC	5 cut(s)	196, 233, 519, 582, 882
ApeKI	GCWGC	3 cut(s)	494, 893, 1265
ApoI	RAATTY	1 cut(s)	745
Asp700I	GAANNNNTTC	1 cut(s)	165
AspLEI	GCGC	2 cut(s)	540, 1137
AspS9I	GGNCC	6 cut(s)	197, 362, 520, 827, 883, 1205
AsuC2I	CCSGG	1 cut(s)	523
AsuHPI	GGTGA	1 cut(s)	170
AsuII	TTCGAA	1 cut(s)	143
AsuNHI	GCTAGC	1 cut(s)	1298
AvaI	CYCGRG	5 cut(s)	38, 120, 921, 1074, 1526
AvaII	GGWCC	3 cut(s)	362, 827, 1205
BalI	TGGCCA	1 cut(s)	235
BamHI	GGATCC	1 cut(s)	79
BanII	GRGCYC	3 cut(s)	39, 381, 1829
BbsI	GAAGAC	3 cut(s)	201, 1379, 2181
Bbv12I	GWGCWC	3 cut(s)	39, 381, 1918
BbvI	GCAGC	3 cut(s)	506, 905, 1252
BccI	CCATC	7 cut(s)	892, 983, 1190, 1196, 1226, 1369, 1885
BceAI	ACGGC	1 cut(s)	525
BcgI	CGANNNNNNTGC	2 cut(s)	1952, 1986
BciT130I	CCWGG	1 cut(s)	1637
BclI	TGATCA	1 cut(s)	2116
BcnI	CCSGG	1 cut(s)	523
BcoDI	GTCTC	4 cut(s)	557, 635, 1176, 1540
BfaI	CTAG	7 cut(s)	347, 665, 732, 755, 771, 1299, 1542
BfmI	CTRYAG	2 cut(s)	615, 1674
BfoI	RGCGCY	2 cut(s)	541, 1138
BisI	GCNGC	5 cut(s)	495, 894, 1266, 1770, 2208
BlpI	GCTNAGC	1 cut(s)	1494
BlsI	GCNGC	5 cut(s)	496, 895, 1267, 1771, 2209
Bme1390I	CCNGG	2 cut(s)	523, 1637
Bme18I	GGWCC	3 cut(s)	362, 827, 1205
BmeRI	GACNNNNNGTC	1 cut(s)	727
BmeT110I	CYCGRG	5 cut(s)	38, 120, 921, 1074, 1526
BmgT120I	GGNCC	6 cut(s)	197, 362, 520, 827, 883, 1205
BmiI	GGNNCC	4 cut(s)	81, 103, 829, 1828
BmrFI	CCNGG	2 cut(s)	523, 1637
BmsI	GCATC	3 cut(s)	1439, 2077, 2155
BmtI	GCTAGC	1 cut(s)	1302
BpiI	GAAGAC	3 cut(s)	201, 1379, 2181
BplI	GAGNNNNNCTC	6 cut(s)	1487, 1519, 1520, 1552, 1655, 1687
BpmI	CTGGAG	3 cut(s)	721, 1323, 1389
Bpu1102I	GCTNAGC	1 cut(s)	1494
Bpu14I	TTCGAA	1 cut(s)	143
BpuEI	CTTGAG	3 cut(s)	53, 554, 897
BpuMI	CCSGG	1 cut(s)	523
BsaAI	YACGTR	1 cut(s)	2004
BsaI	GGTCTC	1 cut(s)	635
BsaJI	CCNNGG	5 cut(s)	119, 320, 516, 625, 1635
BsaWI	WCCGGW	1 cut(s)	867
BsaXI	ACNNNNNCTCC	4 cut(s)	368, 398, 1387, 1417
Bsc4I	CCNNNNNNNGG	6 cut(s)	125, 155, 522, 658, 1327, 1904
Bse1I	ACTGG	3 cut(s)	738, 1406, 1864
Bse3DI	GCAATG	1 cut(s)	54
BseBI	CCWGG	1 cut(s)	1637
BseDI	CCNNGG	5 cut(s)	119, 320, 516, 625, 1635
BseGI	GGATG	5 cut(s)	177, 724, 976, 1207, 2150
BseLI	CCNNNNNNNGG	6 cut(s)	125, 155, 522, 658, 1327, 1904
BseMI	GCAATG	1 cut(s)	54
BseMII	CTCAG	9 cut(s)	218, 960, 1362, 1463, 1485, 1551, 1653, 1915, 1919
BseNI	ACTGG	3 cut(s)	738, 1406, 1864
BseRI	GAGGAG	1 cut(s)	2178
BseXI	GCAGC	3 cut(s)	506, 905, 1252
Bsh1236I	CGCG	1 cut(s)	261
BshFI	GGCC	5 cut(s)	198, 235, 521, 584, 884
BsiHKAI	GWGCWC	3 cut(s)	39, 381, 1918
BsiHKCI	CYCGRG	5 cut(s)	38, 120, 921, 1074, 1526
BsiSI	CCGG	2 cut(s)	523, 868
BslFI	GGGAC	1 cut(s)	813
BslI	CCNNNNNNNGG	6 cut(s)	125, 155, 522, 658, 1327, 1904
BsmAI	GTCTC	4 cut(s)	557, 635, 1176, 1540
BsmFI	GGGAC	1 cut(s)	813
BsnI	GGCC	5 cut(s)	198, 235, 521, 584, 884
Bso31I	GGTCTC	1 cut(s)	635
BsoBI	CYCGRG	5 cut(s)	38, 120, 921, 1074, 1526
Bsp119I	TTCGAA	1 cut(s)	143
Bsp1286I	GDGCHC	4 cut(s)	39, 381, 1829, 1918
Bsp1407I	TGTACA	1 cut(s)	51
Bsp143I	GATC	9 cut(s)	79, 90, 878, 901, 992, 1098, 2011, 2066, 2116
Bsp1720I	GCTNAGC	1 cut(s)	1494
Bsp68I	TCGCGA	1 cut(s)	261
BspACI	CCGC	7 cut(s)	424, 569, 968, 1121, 1219, 1769, 2208
BspANI	GGCC	5 cut(s)	198, 235, 521, 584, 884
BspCNI	CTCAG	9 cut(s)	217, 959, 1363, 1462, 1486, 1550, 1654, 1914, 1920
BspFNI	CGCG	1 cut(s)	261
BspLI	GGNNCC	4 cut(s)	81, 103, 829, 1828
BspMAI	CTGCAG	1 cut(s)	619
BspOI	GCTAGC	1 cut(s)	1302
BspPI	GGATC	6 cut(s)	74, 87, 886, 909, 1000, 2074
BspT104I	TTCGAA	1 cut(s)	143
BspTNI	GGTCTC	1 cut(s)	635
BsrDI	GCAATG	1 cut(s)	54
BsrGI	TGTACA	1 cut(s)	51
BsrI	ACTGG	3 cut(s)	738, 1406, 1864
BssECI	CCNNGG	5 cut(s)	119, 320, 516, 625, 1635
BssMI	GATC	9 cut(s)	79, 90, 878, 901, 992, 1098, 2011, 2066, 2116
BssT1I	CCWWGG	2 cut(s)	320, 516
Bst2UI	CCWGG	1 cut(s)	1637
Bst4CI	ACNGT	5 cut(s)	62, 1111, 1170, 1566, 2075
Bst6I	CTCTTC	4 cut(s)	190, 195, 636, 1179
BstAPI	GCANNNNNTGC	1 cut(s)	566
BstAUI	TGTACA	1 cut(s)	51
BstBAI	YACGTR	1 cut(s)	2004
BstBI	TTCGAA	1 cut(s)	143
BstC8I	GCNNGC	7 cut(s)	116, 296, 402, 1045, 1300, 1795, 1934
BstDSI	CCRYGG	1 cut(s)	625
BstENI	CCTNNNNNAGG	2 cut(s)	656, 1902
BstF5I	GGATG	5 cut(s)	177, 724, 976, 1207, 2150
BstFNI	CGCG	1 cut(s)	261
BstH2I	RGCGCY	2 cut(s)	541, 1138
BstHHI	GCGC	2 cut(s)	540, 1137
BstKTI	GATC	9 cut(s)	82, 93, 881, 904, 995, 1101, 2014, 2069, 2119
BstMAI	GTCTC	4 cut(s)	557, 635, 1176, 1540
BstMBI	GATC	9 cut(s)	79, 90, 878, 901, 992, 1098, 2011, 2066, 2116
BstMWI	GCNNNNNNNGC	8 cut(s)	385, 443, 566, 644, 890, 965, 1986, 2087
BstNI	CCWGG	1 cut(s)	1637
BstNSI	RCATGY	5 cut(s)	404, 494, 1009, 1148, 1253
BstSCI	CCNGG	2 cut(s)	521, 1635
BstSFI	CTRYAG	2 cut(s)	615, 1674
BstUI	CGCG	1 cut(s)	261
BstV1I	GCAGC	3 cut(s)	506, 905, 1252
BstV2I	GAAGAC	3 cut(s)	201, 1379, 2181
BstX2I	RGATCY	1 cut(s)	79
BstYI	RGATCY	1 cut(s)	79
BsuRI	GGCC	5 cut(s)	198, 235, 521, 584, 884
BtgI	CCRYGG	1 cut(s)	625
BtgZI	GCGATG	1 cut(s)	911
BtsCI	GGATG	5 cut(s)	177, 724, 976, 1207, 2150
BtsI	GCAGTG	2 cut(s)	395, 1462
BtsIMutI	CAGTG	3 cut(s)	395, 1462, 2080
BtuMI	TCGCGA	1 cut(s)	261
Cac8I	GCNNGC	7 cut(s)	116, 296, 402, 1045, 1300, 1795, 1934
CaiI	CAGNNNCTG	2 cut(s)	566, 1859
CfoI	GCGC	2 cut(s)	540, 1137
Cfr13I	GGNCC	6 cut(s)	197, 362, 520, 827, 883, 1205
CseI	GACGC	1 cut(s)	810
Csp6I	GTAC	7 cut(s)	52, 572, 997, 1239, 1368, 1844, 1984
CspCI	CAANNNNNGTGG	2 cut(s)	354, 389
CviAII	CATG	9 cut(s)	401, 491, 586, 605, 809, 1006, 1010, 1145, 1250
CviQI	GTAC	7 cut(s)	52, 572, 997, 1239, 1368, 1844, 1984
DpnI	GATC	9 cut(s)	81, 92, 880, 903, 994, 1100, 2013, 2068, 2118
DpnII	GATC	9 cut(s)	79, 90, 878, 901, 992, 1098, 2011, 2066, 2116
DriI	GACNNNNNGTC	1 cut(s)	727
EaeI	YGGCCR	1 cut(s)	233
Eam1104I	CTCTTC	4 cut(s)	190, 195, 636, 1179
Eam1105I	GACNNNNNGTC	1 cut(s)	727
EarI	CTCTTC	4 cut(s)	190, 195, 636, 1179
EciI	GGCGGA	1 cut(s)	439
Ecl136II	GAGCTC	2 cut(s)	37, 379
Eco130I	CCWWGG	2 cut(s)	320, 516
Eco24I	GRGCYC	3 cut(s)	39, 381, 1829
Eco31I	GGTCTC	1 cut(s)	635
Eco47I	GGWCC	3 cut(s)	362, 827, 1205
Eco53kI	GAGCTC	2 cut(s)	37, 379
Eco57I	CTGAAG	3 cut(s)	660, 1769, 1773
Eco88I	CYCGRG	5 cut(s)	38, 120, 921, 1074, 1526
EcoICRI	GAGCTC	2 cut(s)	37, 379
EcoNI	CCTNNNNNAGG	2 cut(s)	656, 1902
EcoO109I	RGGNCCY	1 cut(s)	827
EcoRI	GAATTC	1 cut(s)	745
EcoRII	CCWGG	1 cut(s)	1635
EcoT14I	CCWWGG	2 cut(s)	320, 516
EcoT22I	ATGCAT	2 cut(s)	1011, 1150
EcoT38I	GRGCYC	3 cut(s)	39, 381, 1829
ErhI	CCWWGG	2 cut(s)	320, 516
FaeI	CATG	9 cut(s)	404, 494, 589, 608, 812, 1009, 1013, 1148, 1253
FalI	AAGNNNNNCTT	2 cut(s)	1717, 1749
FaqI	GGGAC	1 cut(s)	813
FatI	CATG	9 cut(s)	400, 490, 585, 604, 808, 1005, 1009, 1144, 1249
FbaI	TGATCA	1 cut(s)	2116
Fnu4HI	GCNGC	5 cut(s)	495, 894, 1266, 1770, 2208
FokI	GGATG	5 cut(s)	164, 731, 983, 1214, 2137
FriOI	GRGCYC	3 cut(s)	39, 381, 1829
Fsp4HI	GCNGC	5 cut(s)	495, 894, 1266, 1770, 2208
FspBI	CTAG	7 cut(s)	347, 665, 732, 755, 771, 1299, 1542
GlaI	GCGC	2 cut(s)	539, 1136
GluI	GCNGC	5 cut(s)	495, 894, 1266, 1770, 2208
GsuI	CTGGAG	3 cut(s)	721, 1323, 1389
HaeII	RGCGCY	2 cut(s)	541, 1138
HaeIII	GGCC	5 cut(s)	198, 235, 521, 584, 884
HapII	CCGG	2 cut(s)	523, 868
HgaI	GACGC	1 cut(s)	810
HhaI	GCGC	2 cut(s)	540, 1137
Hin1II	CATG	9 cut(s)	404, 494, 589, 608, 812, 1009, 1013, 1148, 1253
Hin6I	GCGC	2 cut(s)	538, 1135
HinP1I	GCGC	2 cut(s)	538, 1135
HindIII	AAGCTT	2 cut(s)	1556, 1654
HpaII	CCGG	2 cut(s)	523, 868
HphI	GGTGA	1 cut(s)	170
Hpy166II	GTNNAC	4 cut(s)	54, 161, 362, 999
Hpy8I	GTNNAC	4 cut(s)	54, 161, 362, 999
Hpy99I	CGWCG	1 cut(s)	546
HpyAV	CCTTC	6 cut(s)	471, 662, 698, 1466, 1794, 1947
HpyCH4III	ACNGT	5 cut(s)	62, 1111, 1170, 1566, 2075
HpyCH4IV	ACGT	2 cut(s)	477, 2003
HpyF10VI	GCNNNNNNNGC	8 cut(s)	385, 443, 566, 644, 890, 965, 1986, 2087
HpySE526I	ACGT	2 cut(s)	477, 2003
Hsp92II	CATG	9 cut(s)	404, 494, 589, 608, 812, 1009, 1013, 1148, 1253
HspAI	GCGC	2 cut(s)	538, 1135
Ksp22I	TGATCA	1 cut(s)	2116
Kzo9I	GATC	9 cut(s)	79, 90, 878, 901, 992, 1098, 2011, 2066, 2116
LmnI	GCTCC	7 cut(s)	101, 376, 740, 856, 1832, 2191, 2218
Lsp1109I	GCAGC	3 cut(s)	506, 905, 1252
LweI	GCATC	3 cut(s)	1439, 2077, 2155
MaeI	CTAG	7 cut(s)	347, 665, 732, 755, 771, 1299, 1542
MaeII	ACGT	2 cut(s)	477, 2003
MaeIII	GTNAC	2 cut(s)	511, 1408
MalI	GATC	9 cut(s)	81, 92, 880, 903, 994, 1100, 2013, 2068, 2118
MboI	GATC	9 cut(s)	79, 90, 878, 901, 992, 1098, 2011, 2066, 2116
MflI	RGATCY	1 cut(s)	79
MhlI	GDGCHC	4 cut(s)	39, 381, 1829, 1918
MlsI	TGGCCA	1 cut(s)	235
MluCI	AATT	7 cut(s)	237, 328, 595, 745, 929, 1322, 1464
MluNI	TGGCCA	1 cut(s)	235
MlyI	GAGTC	2 cut(s)	90, 2141
Mox20I	TGGCCA	1 cut(s)	235
Mph1103I	ATGCAT	2 cut(s)	1011, 1150
MroXI	GAANNNNTTC	1 cut(s)	165
MscI	TGGCCA	1 cut(s)	235
MseI	TTAA	7 cut(s)	407, 552, 675, 1325, 1380, 1553, 2213
MslI	CAYNNNNRTG	2 cut(s)	948, 1004
Msp20I	TGGCCA	1 cut(s)	235
MspI	CCGG	2 cut(s)	523, 868
MspR9I	CCNGG	2 cut(s)	523, 1637
MvaI	CCWGG	1 cut(s)	1637
MvnI	CGCG	1 cut(s)	261
MwoI	GCNNNNNNNGC	8 cut(s)	385, 443, 566, 644, 890, 965, 1986, 2087
NciI	CCSGG	1 cut(s)	523
NdeII	GATC	9 cut(s)	79, 90, 878, 901, 992, 1098, 2011, 2066, 2116
NheI	GCTAGC	1 cut(s)	1298
NlaIII	CATG	9 cut(s)	404, 494, 589, 608, 812, 1009, 1013, 1148, 1253
NlaIV	GGNNCC	4 cut(s)	81, 103, 829, 1828
NruI	TCGCGA	1 cut(s)	261
NsiI	ATGCAT	2 cut(s)	1011, 1150
NspI	RCATGY	5 cut(s)	404, 494, 1009, 1148, 1253
NspV	TTCGAA	1 cut(s)	143
PaeI	GCATGC	1 cut(s)	404
PaeR7I	CTCGAG	4 cut(s)	38, 921, 1074, 1526
PcsI	WCGNNNNNNNCGW	1 cut(s)	265
PdmI	GAANNNNTTC	1 cut(s)	165
PfeI	GAWTC	8 cut(s)	145, 245, 302, 782, 953, 1256, 1780, 2018
PflFI	GACNNNGTC	1 cut(s)	1510
PkrI	GCNGC	5 cut(s)	496, 895, 1267, 1771, 2209
PleI	GAGTC	2 cut(s)	90, 2141
PpsI	GAGTC	2 cut(s)	90, 2141
Ppu21I	YACGTR	1 cut(s)	2004
PpuMI	RGGWCCY	1 cut(s)	827
PsiI	TTATAA	1 cut(s)	290
Psp124BI	GAGCTC	2 cut(s)	39, 381
Psp5II	RGGWCCY	1 cut(s)	827
Psp6I	CCWGG	1 cut(s)	1635
PspGI	CCWGG	1 cut(s)	1635
PspN4I	GGNNCC	4 cut(s)	81, 103, 829, 1828
PspPI	GGNCC	6 cut(s)	197, 362, 520, 827, 883, 1205
PspPPI	RGGWCCY	1 cut(s)	827
PspXI	VCTCGAGB	1 cut(s)	921
PstI	CTGCAG	1 cut(s)	619
PstNI	CAGNNNCTG	2 cut(s)	566, 1859
PsuI	RGATCY	1 cut(s)	79
PsyI	GACNNNGTC	1 cut(s)	1510
RruI	TCGCGA	1 cut(s)	261
RsaI	GTAC	7 cut(s)	53, 573, 998, 1240, 1369, 1845, 1985
RsaNI	GTAC	7 cut(s)	52, 572, 997, 1239, 1368, 1844, 1984
RseI	CAYNNNNRTG	2 cut(s)	948, 1004
SacI	GAGCTC	2 cut(s)	39, 381
SaqAI	TTAA	7 cut(s)	407, 552, 675, 1325, 1380, 1553, 2213
SatI	GCNGC	5 cut(s)	495, 894, 1266, 1770, 2208
Sau3AI	GATC	9 cut(s)	79, 90, 878, 901, 992, 1098, 2011, 2066, 2116
Sau96I	GGNCC	6 cut(s)	197, 362, 520, 827, 883, 1205
SchI	GAGTC	2 cut(s)	90, 2141
ScrFI	CCNGG	2 cut(s)	523, 1637
SduI	GDGCHC	4 cut(s)	39, 381, 1829, 1918
SfaNI	GCATC	3 cut(s)	1439, 2077, 2155
SfcI	CTRYAG	2 cut(s)	615, 1674
Sfr274I	CTCGAG	4 cut(s)	38, 921, 1074, 1526
SfuI	TTCGAA	1 cut(s)	143
SinI	GGWCC	3 cut(s)	362, 827, 1205
SlaI	CTCGAG	4 cut(s)	38, 921, 1074, 1526
SmiMI	CAYNNNNRTG	2 cut(s)	948, 1004
SmlI	CTYRAG	7 cut(s)	32, 38, 533, 912, 921, 1074, 1526
SmoI	CTYRAG	7 cut(s)	32, 38, 533, 912, 921, 1074, 1526
SphI	GCATGC	1 cut(s)	404
Sse9I	AATT	7 cut(s)	237, 328, 595, 745, 929, 1322, 1464
SsiI	CCGC	7 cut(s)	424, 569, 968, 1121, 1219, 1769, 2208
SspMI	CTAG	7 cut(s)	347, 665, 732, 755, 771, 1299, 1542
SstI	GAGCTC	2 cut(s)	39, 381
StyD4I	CCNGG	2 cut(s)	521, 1635
StyI	CCWWGG	2 cut(s)	320, 516
TaaI	ACNGT	5 cut(s)	62, 1111, 1170, 1566, 2075
TaiI	ACGT	2 cut(s)	480, 2006
TasI	AATT	7 cut(s)	237, 328, 595, 745, 929, 1322, 1464
TatI	WGTACW	3 cut(s)	51, 1367, 1983
TauI	GCSGC	2 cut(s)	1772, 2210
TfiI	GAWTC	8 cut(s)	145, 245, 302, 782, 953, 1256, 1780, 2018
Tru1I	TTAA	7 cut(s)	407, 552, 675, 1325, 1380, 1553, 2213
Tru9I	TTAA	7 cut(s)	407, 552, 675, 1325, 1380, 1553, 2213
TscAI	CASTG	3 cut(s)	402, 1462, 2080
TseI	GCWGC	3 cut(s)	494, 893, 1265
TspDTI	ATGAA	8 cut(s)	166, 330, 407, 825, 1077, 1151, 2010, 2187
TspGWI	ACGGA	1 cut(s)	614
TspRI	CASTG	3 cut(s)	402, 1462, 2080
Tth111I	GACNNNGTC	1 cut(s)	1510
VpaK11BI	GGWCC	3 cut(s)	362, 827, 1205
XagI	CCTNNNNNAGG	2 cut(s)	656, 1902
XapI	RAATTY	1 cut(s)	745
XceI	RCATGY	5 cut(s)	404, 494, 1009, 1148, 1253
XhoI	CTCGAG	4 cut(s)	38, 921, 1074, 1526
XmnI	GAANNNNTTC	1 cut(s)	165
XspI	CTAG	7 cut(s)	347, 665, 732, 755, 771, 1299, 1542
Zsp2I	ATGCAT	2 cut(s)	1011, 1150

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.