HAUS augmin-like complex subunit 6 N-terminus
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G40740 |
| fragaria_vesca | FvH4_6g52640 FvH4_6g52640 FvH4_6g52640 FvH4_6g52640 FvH4_6g52640 FvH4_6g52640 |
| malus_domestica | MD09G1017400.v1.1 MD17G1018200.v1.1 |
| prunus_persica | Prupe.3G299500_v2.0.a1 Prupe.3G299500_v2.0.a1 |
| pyrus_communis | pycom111g01430 pycom17g01460 pycom17g01470 |
| rosa_chinensis | RchiOBHm_Chr2g0096321 RchiOBHm_Chr2g0166591 RchiOBHm_Chr2g0174171 RchiOBHm_Chr5g0045391 RchiOBHm_Chr6g0248711 |
| rosa_laevigata | RLG00000022253 |
| rosa_multiflora | Rmu_sc0002045.1_g000024 Rmu_ssc0000100.1_g000024 Rmu_ssc0000198.1_g000004 |
| rosa_roxburghii | Rroxscaffold_2G00078390 Rroxscaffold_3G00231180 |
| rosa_rugosa | Rorug02G0575600 Rorug02G0575600 |
| rosa_samantha | Rh2AG655000 Rh2BG666200 Rh2CG630400 Rh2DG680800 Rh4CG097900 Rh5BG312100 Rh5BG536100 Rh5BG536300 Rh5CG559500 Rh5DG322800 Rh6CG160100 |
| rosa_wichuraiana | Rw2G053760 Rw6G003620 Rw7G025810 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 207 |
| AcsI | RAATTY | 1 cut(s) | 192 |
| AgsI | TTSAA | 1 cut(s) | 222 |
| AjiI | CACGTC | 1 cut(s) | 97 |
| AluBI | AGCT | 5 cut(s) | 170, 245, 257, 282, 294 |
| AluI | AGCT | 5 cut(s) | 170, 245, 257, 282, 294 |
| ApeKI | GCWGC | 2 cut(s) | 245, 268 |
| ApoI | RAATTY | 1 cut(s) | 192 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 48 |
| AspLEI | GCGC | 1 cut(s) | 208 |
| AspS9I | GGNCC | 1 cut(s) | 185 |
| AvaII | GGWCC | 1 cut(s) | 185 |
| BbvI | GCAGC | 2 cut(s) | 232, 280 |
| BfaI | CTAG | 1 cut(s) | 254 |
| BisI | GCNGC | 2 cut(s) | 246, 269 |
| BlsI | GCNGC | 2 cut(s) | 247, 270 |
| Bme18I | GGWCC | 1 cut(s) | 185 |
| BmgBI | CACGTC | 1 cut(s) | 97 |
| BmgT120I | GGNCC | 1 cut(s) | 185 |
| BmiI | GGNNCC | 1 cut(s) | 186 |
| BseGI | GGATG | 1 cut(s) | 20 |
| BseXI | GCAGC | 2 cut(s) | 232, 280 |
| BspLI | GGNNCC | 1 cut(s) | 186 |
| Bst4CI | ACNGT | 2 cut(s) | 91, 150 |
| Bst6I | CTCTTC | 2 cut(s) | 54, 70 |
| BstDEI | CTNAG | 1 cut(s) | 197 |
| BstF5I | GGATG | 1 cut(s) | 20 |
| BstHHI | GCGC | 1 cut(s) | 208 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 254 |
| BstNSI | RCATGY | 1 cut(s) | 128 |
| BstV1I | GCAGC | 2 cut(s) | 232, 280 |
| BtrI | CACGTC | 1 cut(s) | 97 |
| BtsCI | GGATG | 1 cut(s) | 20 |
| CfoI | GCGC | 1 cut(s) | 208 |
| Cfr13I | GGNCC | 1 cut(s) | 185 |
| CviAII | CATG | 3 cut(s) | 125, 209, 230 |
| CviJI | RGCY | 5 cut(s) | 170, 245, 257, 282, 294 |
| CviKI_1 | RGCY | 5 cut(s) | 170, 245, 257, 282, 294 |
| DdeI | CTNAG | 1 cut(s) | 197 |
| Eam1104I | CTCTTC | 2 cut(s) | 54, 70 |
| EarI | CTCTTC | 2 cut(s) | 54, 70 |
| Eco47I | GGWCC | 1 cut(s) | 185 |
| FaeI | CATG | 3 cut(s) | 128, 212, 233 |
| FaiI | YATR | 7 cut(s) | 126, 144, 159, 161, 210, 231, 298 |
| FatI | CATG | 3 cut(s) | 124, 208, 229 |
| FauNDI | CATATG | 1 cut(s) | 159 |
| Fnu4HI | GCNGC | 2 cut(s) | 246, 269 |
| FokI | GGATG | 1 cut(s) | 7 |
| Fsp4HI | GCNGC | 2 cut(s) | 246, 269 |
| FspAI | RTGCGCAY | 1 cut(s) | 207 |
| FspBI | CTAG | 1 cut(s) | 254 |
| FspI | TGCGCA | 1 cut(s) | 207 |
| GlaI | GCGC | 1 cut(s) | 207 |
| GluI | GCNGC | 2 cut(s) | 246, 269 |
| HhaI | GCGC | 1 cut(s) | 208 |
| Hin1II | CATG | 3 cut(s) | 128, 212, 233 |
| Hin6I | GCGC | 1 cut(s) | 206 |
| HinP1I | GCGC | 1 cut(s) | 206 |
| HincII | GTYRAC | 1 cut(s) | 94 |
| HindII | GTYRAC | 1 cut(s) | 94 |
| HindIII | AAGCTT | 1 cut(s) | 292 |
| HinfI | GANTC | 3 cut(s) | 17, 78, 236 |
| Hpy166II | GTNNAC | 2 cut(s) | 82, 94 |
| Hpy188III | TCNNGA | 1 cut(s) | 188 |
| Hpy8I | GTNNAC | 2 cut(s) | 82, 94 |
| HpyAV | CCTTC | 1 cut(s) | 206 |
| HpyCH4III | ACNGT | 2 cut(s) | 91, 150 |
| HpyCH4IV | ACGT | 1 cut(s) | 96 |
| HpyCH4V | TGCA | 1 cut(s) | 248 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 254 |
| HpyF3I | CTNAG | 1 cut(s) | 197 |
| HpySE526I | ACGT | 1 cut(s) | 96 |
| Hsp92II | CATG | 3 cut(s) | 128, 212, 233 |
| HspAI | GCGC | 1 cut(s) | 206 |
| LpnPI | CCDG | 3 cut(s) | 97, 201, 272 |
| Lsp1109I | GCAGC | 2 cut(s) | 232, 280 |
| MaeI | CTAG | 1 cut(s) | 254 |
| MaeII | ACGT | 1 cut(s) | 96 |
| MaeIII | GTNAC | 1 cut(s) | 150 |
| MboII | GAAGA | 3 cut(s) | 16, 41, 87 |
| MluCI | AATT | 2 cut(s) | 105, 192 |
| MlyI | GAGTC | 2 cut(s) | 87, 245 |
| MmeI | TCCRAC | 1 cut(s) | 98 |
| MnlI | CCTC | 2 cut(s) | 169, 175 |
| MroXI | GAANNNNTTC | 1 cut(s) | 48 |
| MseI | TTAA | 1 cut(s) | 303 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 254 |
| NdeI | CATATG | 1 cut(s) | 159 |
| NlaIII | CATG | 3 cut(s) | 128, 212, 233 |
| NlaIV | GGNNCC | 1 cut(s) | 186 |
| NmeAIII | GCCGAG | 1 cut(s) | 259 |
| NmuCI | GTSAC | 1 cut(s) | 150 |
| NsbI | TGCGCA | 1 cut(s) | 207 |
| NspI | RCATGY | 1 cut(s) | 128 |
| PdmI | GAANNNNTTC | 1 cut(s) | 48 |
| PfeI | GAWTC | 1 cut(s) | 17 |
| PkrI | GCNGC | 2 cut(s) | 247, 270 |
| PleI | GAGTC | 2 cut(s) | 86, 244 |
| PpsI | GAGTC | 2 cut(s) | 86, 244 |
| PspN4I | GGNNCC | 1 cut(s) | 186 |
| PspPI | GGNCC | 1 cut(s) | 185 |
| SaqAI | TTAA | 1 cut(s) | 303 |
| SatI | GCNGC | 2 cut(s) | 246, 269 |
| Sau96I | GGNCC | 1 cut(s) | 185 |
| SchI | GAGTC | 2 cut(s) | 87, 245 |
| SetI | ASST | 7 cut(s) | 99, 172, 247, 259, 284, 291, 296 |
| SinI | GGWCC | 1 cut(s) | 185 |
| Sse9I | AATT | 2 cut(s) | 105, 192 |
| SspMI | CTAG | 1 cut(s) | 254 |
| TaaI | ACNGT | 2 cut(s) | 91, 150 |
| TaiI | ACGT | 1 cut(s) | 99 |
| TaqI | TCGA | 1 cut(s) | 55 |
| TasI | AATT | 2 cut(s) | 105, 192 |
| TfiI | GAWTC | 1 cut(s) | 17 |
| Tru1I | TTAA | 1 cut(s) | 303 |
| Tru9I | TTAA | 1 cut(s) | 303 |
| TseFI | GTSAC | 1 cut(s) | 150 |
| TseI | GCWGC | 2 cut(s) | 245, 268 |
| Tsp45I | GTSAC | 1 cut(s) | 150 |
| TspDTI | ATGAA | 7 cut(s) | 9, 17, 41, 57, 131, 146, 225 |
| VpaK11BI | GGWCC | 1 cut(s) | 185 |
| XapI | RAATTY | 1 cut(s) | 192 |
| XceI | RCATGY | 1 cut(s) | 128 |
| XmnI | GAANNNNTTC | 1 cut(s) | 48 |
| XspI | CTAG | 1 cut(s) | 254 |