Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0002442

Physical Location & Seq

Genomic Coordinates Reverse (-)

80296459 .. 80301995

Gene Structure 5537 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG630400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2211 bp

ATGACTATGGACAGAGAGAAGGAGAGAGAGATAGAGCTGGAGAGTGCAATGTACACTAACTGTTTGCTGTTAGGTTTGGATCCGGCCATTATCGGACTCGGAGCCTCCAACTCCACTCCCCGGGTCGGGTTCTTCCGCCACTCCAACCCCAAACTCGGCGAGCAGCTCCTCTACTTCATCCTCTCTTCCCTCCGTGGCCCAATTCAATCCGCCAAGGATTTCGATAAGGTCTGGCCAATCTTCGATTCTACGCAATCTCGCGATTTTCGTAAGGTTGTGCAAGGGATTATTAGCGAGCTCGAATCGCAAGGGGCGCTTCCCAGGAGCAATTCGAGGGTTTCATCACTTGCTACATGTTGTGGACCGAGGTTTGTAGAACTTCTGTGGCAACTTTCTTTGCATGCTTTGCGAGAGGTTCATAGGCGGACATTTGCAGCTGATGTAGCTTCTAACCCTCTTCCTGCGTCATTGACGGATGTGGCCTTTTCACATGCAGCCACTTTACTTCCTGTTACAAAGGCTAGAATAGCACTTGAAAGAAGGAAGTTTCTTAAGAATGCGGAAACAGCAGTACAGAGACAGGCCATGTGGTCAAATTTGGCTCATGAAATGACAGCAGAGTTTCGTGGTTTGTGTGCTGAAGAGGCTTATTTGCAGCAAGAGCTGGAAAAATTACATGATCTTAGGAACAAAGTCAAGTTGGAAGGGGAACATTGGGATGACCTTGTATCTAGTTCGAGTCAGAATTCTCATTTAGTATCCAAGGCTACTCGTTTGTGGGAGTCGATATTAGCCCGTAAAAGTCAACATGAAGTTCTTGCTTCGGGCCCTATCGAGGATTTAATCGCTCATCGGGAGCATAGGTACCGCATTTCTGGATCTTCTTTGCTTGCAGCTATGGATCAGAGCTCTCAGGTTCCTTATGCAGATGTCTTATCTGTCCAGTCTGGTGATTTTACTCCTACACATGTAGATGATAAAGAGCAGAGTGATGGTTCATATGTCAATATTAACAGAGAAAAGATGAAGAATAATTTAGATTCATCCCATTCACAAGTAAATGATGAAACTCTTCATCGAGCAGATGAGAGAAGTGGAAGAGTCCACCCAACTGTTGACGTGGCAGAAATTATCAGGCGTTGGACACATGCTTTACAGCGTATTCATAAACAGTCACTTCATATGGCAAAAGCTAATGAGGGAGAGGGTCCAGAAATTCTAAGAAGTGCGCATGAAGGCAGTTCAAGTGGTCATGCCGAGTCATTAGCTGCAACACTAGCTGAACATCAGCAGCACTTGGTTAGCTTTCAGGTTCTCATTAATCAACTGAAGGAAGTTGCTCCAGCAATACAAAAGTCAATATCAGAATGTACAGATAAAGTAGATAGCATTTCCTCTAATCTGCCTCCAATGACTAAGCATCCTGGCCGCTCAACCTCACCTAGTCAAGCACAGAGCAGTGGAAGGACATTGGAGAGCACTGATGATGTGGCTGAAGTCACTTCGAAGTTGTCCACCTTTCAGCTCGAAAAGGTGTCAGCCAGTGCGCCTGCTCTAAAGCTCCCCCAGTTATTTAGCTTGACGCCTAATTCTCATAAGCGCCTTGCTTCAGCTACTCAAATAAGTCAAACAGAGAATTTTTCTGAAAGGAAACCTTTGGAGCAGCCTCTATCTAATAATCACATAGATAATCTGCCACAAGATAGTGATAGTAATTATGTCCAGAATTTAAAGAGATCTGTTAGAGAAGCTGCTTTGTCACGGAAGTCCTTCCATTCCAAATCATCACAAGGCAGTCATTCTGATGAAAGCTCAGAGCATTTCTTTATGCCTCTTTCATCATCTGGGTTTTCTCGTCTGGGTCCAGAATCTAAAGGGGGTTTGATAACTAGTTCGCTTCATGATTATGACCAAGTAAATGGGTTTCTTTCAGTTACGGGTTCAAACAGTGCTGCTTCTGATGCACAAAGATCGTTTTATGACTTTGAGGAAGCTCGGGAGCAGGTCTTCTCTCCTCCTTTGCTAATAGAAGATGCTTATGAAGACTTACTGGGTATGTTGCTTAAGGCACTGACTATTCTAGTTAGTAGGCTTCTTTTTTATTTAGTTTTTTTATATGCACAGATTGTTGACTGGCTACATTTTAGTAATAAAATGCTTCAAATTGAGTATACGGTTCTCTGCTGGTTCAGGCAACTTTCTGTTATATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005819 GO:0005856 GO:0006996 GO:0007010 GO:0007017 GO:0007275 GO:0008017 GO:0008092 GO:0008150 GO:0009524 GO:0009553 GO:0009555 GO:0009561 GO:0009987 GO:0015630 GO:0015631 GO:0016043 GO:0032501 GO:0032502 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0048229 GO:0048856 GO:0051011 GO:0055046 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HAUS6_N

Protein Analysis

736

Amino Acids

82.17

Weight (kDa)

6.16

Isoelectric Point (pI)

52.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HAUS6_N	PF14661	17 - 261	8.6e-44	HAUS augmin-like complex subunit 6 N-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002442)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G40740
fragaria_vesca	FvH4_6g52640 FvH4_6g52640 FvH4_6g52640 FvH4_6g52640 FvH4_6g52640 FvH4_6g52640
malus_domestica	MD09G1017400.v1.1 MD17G1018200.v1.1
prunus_persica	Prupe.3G299500_v2.0.a1 Prupe.3G299500_v2.0.a1
pyrus_communis	pycom111g01430 pycom17g01460 pycom17g01470
rosa_chinensis	RchiOBHm_Chr2g0096321 RchiOBHm_Chr2g0166591 RchiOBHm_Chr2g0174171 RchiOBHm_Chr5g0045391 RchiOBHm_Chr6g0248711
rosa_laevigata	RLG00000022253
rosa_multiflora	Rmu_sc0002045.1_g000024 Rmu_ssc0000100.1_g000024 Rmu_ssc0000198.1_g000004
rosa_roxburghii	Rroxscaffold_2G00078390 Rroxscaffold_3G00231180
rosa_rugosa	Rorug02G0575600 Rorug02G0575600
rosa_samantha	Rh2AG655000 Rh2BG666200 Rh2CG630400 Rh2DG680800 Rh4CG097900 Rh5BG312100 Rh5BG536100 Rh5BG536300 Rh5CG559500 Rh5DG322800 Rh6CG160100
rosa_wichuraiana	Rw2G053760 Rw6G003620 Rw7G025810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1230
Acc36I	ACCTGC	1 cut(s)	1993
Acc65I	GGTACC	1 cut(s)	864
AccB1I	GGYRCC	1 cut(s)	864
AccBSI	CCGCTC	1 cut(s)	1431
AccI	GTMKAC	1 cut(s)	2171
AccII	CGCG	1 cut(s)	261
AciI	CCGC	6 cut(s)	136, 210, 424, 560, 868, 1429
AclWI	GGATC	4 cut(s)	74, 87, 886, 909
AcoI	YGGCCR	3 cut(s)	84, 233, 1426
AcsI	RAATTY	5 cut(s)	595, 745, 1215, 1636, 1726
AcuI	CTGAAG	4 cut(s)	660, 1349, 1515, 1593
AcyI	GRCGYC	1 cut(s)	1583
AfaI	GTAC	4 cut(s)	53, 573, 866, 1372
AfiI	CCNNNNNNNGG	5 cut(s)	120, 125, 126, 155, 835
AflII	CTTAAG	2 cut(s)	551, 2063
AflIII	ACRYGT	2 cut(s)	353, 967
AgsI	TTSAA	5 cut(s)	206, 536, 1245, 1944, 2162
AhlI	ACTAGT	1 cut(s)	1889
AjiI	CACGTC	1 cut(s)	1120
AjnI	CCWGG	2 cut(s)	320, 1423
AjuI	GAANNNNNNNTTGG	2 cut(s)	229, 261
Alw21I	GWGCWC	3 cut(s)	300, 911, 1481
Alw26I	GTCTC	1 cut(s)	571
AlwI	GGATC	4 cut(s)	74, 87, 886, 909
Ama87I	CYCGRG	2 cut(s)	120, 1995
AoxI	GGCC	7 cut(s)	84, 196, 233, 480, 582, 826, 1426
ApaI	GGGCCC	1 cut(s)	830
ApoI	RAATTY	5 cut(s)	595, 745, 1215, 1636, 1726
AseI	ATTAAT	1 cut(s)	1320
Asp700I	GAANNNNTTC	2 cut(s)	1071, 1769
Asp718I	GGTACC	1 cut(s)	864
AspLEI	GCGC	4 cut(s)	316, 1231, 1549, 1602
AspS9I	GGNCC	6 cut(s)	197, 362, 826, 827, 1208, 1862
AsuC2I	CCSGG	2 cut(s)	121, 122
AsuHPI	GGTGA	2 cut(s)	962, 1431
AsuII	TTCGAA	1 cut(s)	1505
AvaI	CYCGRG	2 cut(s)	120, 1995
AvaII	GGWCC	3 cut(s)	362, 1208, 1862
BaeGI	GKGCMC	1 cut(s)	830
BalI	TGGCCA	1 cut(s)	235
BamHI	GGATCC	1 cut(s)	79
BanI	GGYRCC	1 cut(s)	864
BanII	GRGCYC	3 cut(s)	300, 830, 911
BbsI	GAAGAC	2 cut(s)	1999, 2049
Bbv12I	GWGCWC	3 cut(s)	300, 911, 1481
BccI	CCATC	1 cut(s)	986
BcgI	CGANNNNNNTGC	2 cut(s)	1953, 1987
BciT130I	CCWGG	2 cut(s)	322, 1425
BciVI	GTATCC	1 cut(s)	769
BcnI	CCSGG	2 cut(s)	121, 122
BcoDI	GTCTC	1 cut(s)	571
BcuI	ACTAGT	1 cut(s)	1889
BfaI	CTAG	6 cut(s)	522, 732, 1277, 1443, 1890, 2081
BfoI	RGCGCY	2 cut(s)	317, 1603
BfrI	CTTAAG	2 cut(s)	551, 2063
BfuAI	ACCTGC	1 cut(s)	1993
BfuI	GTATCC	1 cut(s)	769
BglII	AGATCT	1 cut(s)	1736
Bme1390I	CCNGG	4 cut(s)	121, 122, 322, 1425
Bme18I	GGWCC	3 cut(s)	362, 1208, 1862
BmeT110I	CYCGRG	2 cut(s)	120, 1995
BmgBI	CACGTC	1 cut(s)	1120
BmgT120I	GGNCC	6 cut(s)	197, 362, 826, 827, 1208, 1862
BmiI	GGNNCC	7 cut(s)	81, 103, 828, 866, 918, 1209, 1863
BmrFI	CCNGG	4 cut(s)	121, 122, 322, 1425
BmrI	ACTGGG	2 cut(s)	1561, 2060
BmsI	GCATC	3 cut(s)	1429, 1951, 2023
BmuI	ACTGGG	2 cut(s)	1561, 2060
BpiI	GAAGAC	2 cut(s)	1999, 2049
BpmI	CTGGAG	2 cut(s)	59, 1326
Bpu14I	TTCGAA	1 cut(s)	1505
BpuMI	CCSGG	2 cut(s)	121, 122
BsaHI	GRCGYC	1 cut(s)	1583
BsaJI	CCNNGG	7 cut(s)	119, 120, 193, 213, 320, 365, 762
BsaXI	ACNNNNNCTCC	2 cut(s)	848, 878
Bsc4I	CCNNNNNNNGG	5 cut(s)	120, 125, 126, 155, 835
Bse1I	ACTGG	5 cut(s)	943, 1542, 1567, 2055, 2138
Bse3DI	GCAATG	1 cut(s)	54
BseBI	CCWGG	2 cut(s)	322, 1425
BseDI	CCNNGG	7 cut(s)	119, 120, 193, 213, 320, 365, 762
BseGI	GGATG	5 cut(s)	177, 481, 724, 1043, 1420
BseLI	CCNNNNNNNGG	5 cut(s)	120, 125, 126, 155, 835
BseMI	GCAATG	1 cut(s)	54
BseMII	CTCAG	2 cut(s)	926, 1827
BseNI	ACTGG	5 cut(s)	943, 1542, 1567, 2055, 2138
BseRI	GAGGAG	2 cut(s)	158, 2004
BseSI	GKGCMC	1 cut(s)	830
Bsh1236I	CGCG	1 cut(s)	261
BshFI	GGCC	7 cut(s)	86, 198, 235, 482, 584, 828, 1428
BshNI	GGYRCC	1 cut(s)	864
BsiHKAI	GWGCWC	3 cut(s)	300, 911, 1481
BsiHKCI	CYCGRG	2 cut(s)	120, 1995
BsiSI	CCGG	2 cut(s)	83, 121
BslI	CCNNNNNNNGG	5 cut(s)	120, 125, 126, 155, 835
BsmAI	GTCTC	1 cut(s)	571
BsmI	GAATGC	1 cut(s)	562
BsnI	GGCC	7 cut(s)	86, 198, 235, 482, 584, 828, 1428
BsoBI	CYCGRG	2 cut(s)	120, 1995
Bsp119I	TTCGAA	1 cut(s)	1505
Bsp120I	GGGCCC	1 cut(s)	826
Bsp1286I	GDGCHC	4 cut(s)	300, 830, 911, 1481
Bsp1407I	TGTACA	2 cut(s)	51, 1370
Bsp143I	GATC	6 cut(s)	79, 679, 878, 901, 1736, 1970
Bsp68I	TCGCGA	1 cut(s)	261
BspACI	CCGC	6 cut(s)	136, 210, 424, 560, 868, 1429
BspANI	GGCC	7 cut(s)	86, 198, 235, 482, 584, 828, 1428
BspCNI	CTCAG	2 cut(s)	925, 1826
BspFNI	CGCG	1 cut(s)	261
BspHI	TCATGA	2 cut(s)	604, 1900
BspLI	GGNNCC	7 cut(s)	81, 103, 828, 866, 918, 1209, 1863
BspMI	ACCTGC	1 cut(s)	1993
BspPI	GGATC	4 cut(s)	74, 87, 886, 909
BspT104I	TTCGAA	1 cut(s)	1505
BspT107I	GGYRCC	1 cut(s)	864
BspTI	CTTAAG	2 cut(s)	551, 2063
BsrBI	CCGCTC	1 cut(s)	1431
BsrDI	GCAATG	1 cut(s)	54
BsrGI	TGTACA	2 cut(s)	51, 1370
BsrI	ACTGG	5 cut(s)	943, 1542, 1567, 2055, 2138
BssECI	CCNNGG	7 cut(s)	119, 120, 193, 213, 320, 365, 762
BssMI	GATC	6 cut(s)	79, 679, 878, 901, 1736, 1970
BssNAI	GTATAC	1 cut(s)	2172
BssNI	GRCGYC	1 cut(s)	1583
BssT1I	CCWWGG	2 cut(s)	213, 762
Bst1107I	GTATAC	1 cut(s)	2172
Bst2UI	CCWGG	2 cut(s)	322, 1425
Bst4CI	ACNGT	5 cut(s)	62, 1114, 1173, 1949, 2176
Bst6I	CTCTTC	5 cut(s)	190, 462, 636, 1077, 1093
BstACI	GRCGYC	1 cut(s)	1583
BstAFI	CTTAAG	2 cut(s)	551, 2063
BstAPI	GCANNNNNTGC	1 cut(s)	406
BstAUI	TGTACA	2 cut(s)	51, 1370
BstBI	TTCGAA	1 cut(s)	1505
BstC8I	GCNNGC	5 cut(s)	161, 296, 402, 891, 1551
BstDEI	CTNAG	5 cut(s)	683, 912, 1220, 1416, 1813
BstDSI	CCRYGG	1 cut(s)	193
BstF5I	GGATG	5 cut(s)	177, 481, 724, 1043, 1420
BstFNI	CGCG	1 cut(s)	261
BstH2I	RGCGCY	2 cut(s)	317, 1603
BstHHI	GCGC	4 cut(s)	316, 1231, 1549, 1602
BstKTI	GATC	6 cut(s)	82, 682, 881, 904, 1739, 1973
BstMAI	GTCTC	1 cut(s)	571
BstMBI	GATC	6 cut(s)	79, 679, 878, 901, 1736, 1970
BstNI	CCWGG	2 cut(s)	322, 1425
BstNSI	RCATGY	5 cut(s)	357, 404, 494, 971, 1151
BstSCI	CCNGG	4 cut(s)	119, 120, 320, 1423
BstSLI	GKGCMC	1 cut(s)	830
BstUI	CGCG	1 cut(s)	261
BstV2I	GAAGAC	2 cut(s)	1999, 2049
BstX2I	RGATCY	3 cut(s)	79, 878, 1736
BstXI	CCANNNNNNTGG	1 cut(s)	1919
BstYI	RGATCY	3 cut(s)	79, 878, 1736
BstZ17I	GTATAC	1 cut(s)	2172
BsuI	GTATCC	1 cut(s)	769
BsuRI	GGCC	7 cut(s)	86, 198, 235, 482, 584, 828, 1428
BtgI	CCRYGG	1 cut(s)	193
BtrI	CACGTC	1 cut(s)	1120
BtsCI	GGATG	5 cut(s)	177, 481, 724, 1043, 1420
BtsI	GCAGTG	1 cut(s)	1465
BtsIMutI	CAGTG	5 cut(s)	1465, 1479, 1549, 1954, 2069
BtuMI	TCGCGA	1 cut(s)	261
BveI	ACCTGC	1 cut(s)	1993
Cac8I	GCNNGC	5 cut(s)	161, 296, 402, 891, 1551
CciI	TCATGA	2 cut(s)	604, 1900
CfoI	GCGC	4 cut(s)	316, 1231, 1549, 1602
Cfr13I	GGNCC	6 cut(s)	197, 362, 826, 827, 1208, 1862
Cfr9I	CCCGGG	1 cut(s)	120
CseI	GACGC	2 cut(s)	453, 1591
Csp6I	GTAC	4 cut(s)	52, 572, 865, 1371
CviQI	GTAC	4 cut(s)	52, 572, 865, 1371
DdeI	CTNAG	5 cut(s)	683, 912, 1220, 1416, 1813
DpnI	GATC	6 cut(s)	81, 681, 880, 903, 1738, 1972
DpnII	GATC	6 cut(s)	79, 679, 878, 901, 1736, 1970
DraI	TTTAAA	1 cut(s)	1731
EaeI	YGGCCR	3 cut(s)	84, 233, 1426
Eam1104I	CTCTTC	5 cut(s)	190, 462, 636, 1077, 1093
EarI	CTCTTC	5 cut(s)	190, 462, 636, 1077, 1093
EciI	GGCGGA	3 cut(s)	125, 199, 439
Ecl136II	GAGCTC	2 cut(s)	298, 909
Eco130I	CCWWGG	2 cut(s)	213, 762
Eco24I	GRGCYC	3 cut(s)	300, 830, 911
Eco47I	GGWCC	3 cut(s)	362, 1208, 1862
Eco53kI	GAGCTC	2 cut(s)	298, 909
Eco57I	CTGAAG	4 cut(s)	660, 1349, 1515, 1593
Eco88I	CYCGRG	2 cut(s)	120, 1995
EcoICRI	GAGCTC	2 cut(s)	298, 909
EcoO109I	RGGNCCY	1 cut(s)	827
EcoRI	GAATTC	1 cut(s)	745
EcoRII	CCWGG	2 cut(s)	320, 1423
EcoT14I	CCWWGG	2 cut(s)	213, 762
EcoT38I	GRGCYC	3 cut(s)	300, 830, 911
ErhI	CCWWGG	2 cut(s)	213, 762
FalI	AAGNNNNNCTT	4 cut(s)	300, 332, 1639, 1671
FauNDI	CATATG	2 cut(s)	1000, 1182
FblI	GTMKAC	1 cut(s)	2171
FokI	GGATG	5 cut(s)	164, 488, 731, 1030, 1407
FriOI	GRGCYC	3 cut(s)	300, 830, 911
FspAI	RTGCGCAY	1 cut(s)	1230
FspBI	CTAG	6 cut(s)	522, 732, 1277, 1443, 1890, 2081
FspI	TGCGCA	1 cut(s)	1230
GlaI	GCGC	4 cut(s)	315, 1230, 1548, 1601
GsuI	CTGGAG	2 cut(s)	59, 1326
HaeII	RGCGCY	2 cut(s)	317, 1603
HaeIII	GGCC	7 cut(s)	86, 198, 235, 482, 584, 828, 1428
HapII	CCGG	2 cut(s)	83, 121
HgaI	GACGC	2 cut(s)	453, 1591
HhaI	GCGC	4 cut(s)	316, 1231, 1549, 1602
Hin1I	GRCGYC	1 cut(s)	1583
Hin6I	GCGC	4 cut(s)	314, 1229, 1547, 1600
HinP1I	GCGC	4 cut(s)	314, 1229, 1547, 1600
HincII	GTYRAC	3 cut(s)	806, 1117, 2131
HindII	GTYRAC	3 cut(s)	806, 1117, 2131
HinfI	GANTC	9 cut(s)	96, 245, 302, 739, 782, 1040, 1101, 1259, 1868
HpaII	CCGG	2 cut(s)	83, 121
HphI	GGTGA	2 cut(s)	962, 1431
Hpy166II	GTNNAC	8 cut(s)	54, 362, 806, 1105, 1117, 1515, 2131, 2172
Hpy188I	TCNGA	9 cut(s)	95, 101, 744, 906, 1366, 1645, 1804, 1816, 1960
Hpy188III	TCNNGA	9 cut(s)	260, 605, 854, 876, 1211, 1723, 1865, 1901, 1997
Hpy8I	GTNNAC	8 cut(s)	54, 362, 806, 1105, 1117, 1515, 2131, 2172
HpyAV	CCTTC	7 cut(s)	13, 534, 698, 1229, 1324, 1458, 1780
HpyCH4III	ACNGT	5 cut(s)	62, 1114, 1173, 1949, 2176
HpyCH4IV	ACGT	1 cut(s)	1119
HpyF3I	CTNAG	5 cut(s)	683, 912, 1220, 1416, 1813
HpySE526I	ACGT	1 cut(s)	1119
Hsp92I	GRCGYC	1 cut(s)	1583
HspAI	GCGC	4 cut(s)	314, 1229, 1547, 1600
KpnI	GGTACC	1 cut(s)	868
Kzo9I	GATC	6 cut(s)	79, 679, 878, 901, 1736, 1970
LmnI	GCTCC	8 cut(s)	101, 171, 324, 856, 1345, 1566, 1660, 1999
LweI	GCATC	3 cut(s)	1429, 1951, 2023
MaeI	CTAG	6 cut(s)	522, 732, 1277, 1443, 1890, 2081
MaeII	ACGT	1 cut(s)	1119
MaeIII	GTNAC	5 cut(s)	511, 1173, 1498, 1758, 1933
MalI	GATC	6 cut(s)	81, 681, 880, 903, 1738, 1972
MbiI	CCGCTC	1 cut(s)	1431
MboI	GATC	6 cut(s)	79, 679, 878, 901, 1736, 1970
MflI	RGATCY	3 cut(s)	79, 878, 1736
MhlI	GDGCHC	4 cut(s)	300, 830, 911, 1481
MlsI	TGGCCA	1 cut(s)	235
MluNI	TGGCCA	1 cut(s)	235
MlyI	GAGTC	5 cut(s)	90, 748, 791, 1110, 1268
MmeI	TCCRAC	4 cut(s)	132, 168, 681, 1121
Mox20I	TGGCCA	1 cut(s)	235
MroXI	GAANNNNTTC	2 cut(s)	1071, 1769
MscI	TGGCCA	1 cut(s)	235
MseI	TTAA	6 cut(s)	552, 842, 1011, 1320, 1730, 2064
MslI	CAYNNNNRTG	4 cut(s)	717, 972, 1803, 1905
Msp20I	TGGCCA	1 cut(s)	235
MspA1I	CMGCKG	1 cut(s)	437
MspCI	CTTAAG	2 cut(s)	551, 2063
MspI	CCGG	2 cut(s)	83, 121
MspR9I	CCNGG	4 cut(s)	121, 122, 322, 1425
Mva1269I	GAATGC	1 cut(s)	562
MvaI	CCWGG	2 cut(s)	322, 1425
MvnI	CGCG	1 cut(s)	261
NciI	CCSGG	2 cut(s)	121, 122
NdeI	CATATG	2 cut(s)	1000, 1182
NdeII	GATC	6 cut(s)	79, 679, 878, 901, 1736, 1970
NlaIV	GGNNCC	7 cut(s)	81, 103, 828, 866, 918, 1209, 1863
NmeAIII	GCCGAG	2 cut(s)	135, 1282
NmuCI	GTSAC	3 cut(s)	1173, 1498, 1758
NruI	TCGCGA	1 cut(s)	261
NsbI	TGCGCA	1 cut(s)	1230
NspI	RCATGY	5 cut(s)	357, 404, 494, 971, 1151
NspV	TTCGAA	1 cut(s)	1505
PaeI	GCATGC	1 cut(s)	404
PagI	TCATGA	2 cut(s)	604, 1900
PciI	ACATGT	2 cut(s)	353, 967
PcsI	WCGNNNNNNNCGW	1 cut(s)	265
PctI	GAATGC	1 cut(s)	562
PdmI	GAANNNNTTC	2 cut(s)	1071, 1769
PfeI	GAWTC	4 cut(s)	245, 302, 1040, 1868
PleI	GAGTC	5 cut(s)	90, 747, 790, 1109, 1267
PpsI	GAGTC	5 cut(s)	90, 747, 790, 1109, 1267
PscI	ACATGT	2 cut(s)	353, 967
PshBI	ATTAAT	1 cut(s)	1320
Psp124BI	GAGCTC	2 cut(s)	300, 911
Psp6I	CCWGG	2 cut(s)	320, 1423
PspGI	CCWGG	2 cut(s)	320, 1423
PspN4I	GGNNCC	7 cut(s)	81, 103, 828, 866, 918, 1209, 1863
PspOMI	GGGCCC	1 cut(s)	826
PspPI	GGNCC	6 cut(s)	197, 362, 826, 827, 1208, 1862
PsuI	RGATCY	3 cut(s)	79, 878, 1736
PvuII	CAGCTG	1 cut(s)	437
RruI	TCGCGA	1 cut(s)	261
RsaI	GTAC	4 cut(s)	53, 573, 866, 1372
RsaNI	GTAC	4 cut(s)	52, 572, 865, 1371
RseI	CAYNNNNRTG	4 cut(s)	717, 972, 1803, 1905
SacI	GAGCTC	2 cut(s)	300, 911
SaqAI	TTAA	6 cut(s)	552, 842, 1011, 1320, 1730, 2064
Sau3AI	GATC	6 cut(s)	79, 679, 878, 901, 1736, 1970
Sau96I	GGNCC	6 cut(s)	197, 362, 826, 827, 1208, 1862
SchI	GAGTC	5 cut(s)	90, 748, 791, 1110, 1268
ScrFI	CCNGG	4 cut(s)	121, 122, 322, 1425
SduI	GDGCHC	4 cut(s)	300, 830, 911, 1481
SfaNI	GCATC	3 cut(s)	1429, 1951, 2023
SfuI	TTCGAA	1 cut(s)	1505
SinI	GGWCC	3 cut(s)	362, 1208, 1862
SmaI	CCCGGG	1 cut(s)	122
SmiMI	CAYNNNNRTG	4 cut(s)	717, 972, 1803, 1905
SmlI	CTYRAG	2 cut(s)	551, 2063
SmoI	CTYRAG	2 cut(s)	551, 2063
SpeI	ACTAGT	1 cut(s)	1889
SphI	GCATGC	1 cut(s)	404
SsiI	CCGC	6 cut(s)	136, 210, 424, 560, 868, 1429
SspI	AATATT	1 cut(s)	1009
SspMI	CTAG	6 cut(s)	522, 732, 1277, 1443, 1890, 2081
SstI	GAGCTC	2 cut(s)	300, 911
StyD4I	CCNGG	4 cut(s)	119, 120, 320, 1423
StyI	CCWWGG	2 cut(s)	213, 762
TaaI	ACNGT	5 cut(s)	62, 1114, 1173, 1949, 2176
TaiI	ACGT	1 cut(s)	1122
TaqII	GACCGA	1 cut(s)	379
TatI	WGTACW	3 cut(s)	51, 571, 1370
TauI	GCSGC	1 cut(s)	1431
TfiI	GAWTC	4 cut(s)	245, 302, 1040, 1868
Tru1I	TTAA	6 cut(s)	552, 842, 1011, 1320, 1730, 2064
Tru9I	TTAA	6 cut(s)	552, 842, 1011, 1320, 1730, 2064
TscAI	CASTG	5 cut(s)	1465, 1486, 1549, 1954, 2076
TseFI	GTSAC	3 cut(s)	1173, 1498, 1758
Tsp45I	GTSAC	3 cut(s)	1173, 1498, 1758
TspGWI	ACGGA	3 cut(s)	182, 488, 1777
TspMI	CCCGGG	1 cut(s)	120
TspRI	CASTG	5 cut(s)	1465, 1486, 1549, 1954, 2076
Vha464I	CTTAAG	2 cut(s)	551, 2063
VpaK11BI	GGWCC	3 cut(s)	362, 1208, 1862
VspI	ATTAAT	1 cut(s)	1320
XapI	RAATTY	5 cut(s)	595, 745, 1215, 1636, 1726
XceI	RCATGY	5 cut(s)	357, 404, 494, 971, 1151
XmaI	CCCGGG	1 cut(s)	120
XmiI	GTMKAC	1 cut(s)	2171
XmnI	GAANNNNTTC	2 cut(s)	1071, 1769
XspI	CTAG	6 cut(s)	522, 732, 1277, 1443, 1890, 2081

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.