Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0002442

Physical Location & Seq

Genomic Coordinates Forward (+)

1420981 .. 1427211

Gene Structure 6231 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1018200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2175 bp

ATGACAATGGACAGAGAGAAGGAGAGAGAGATAGAGCTAGAGAGTGCAATGTACACTAACTGTTTGCTGTTGGGGTTGGATCCGGCGATTATCGGGCTCGGAGGCTCCAATGCCACTCCTCGGGTCGGGTTCTTCCGCCACTCCAACCCTAAATTGGGGGAACAGCTCCTCTACTTCATCCTCTCTTCTCTCAGAGGCCCAATTCAATCCGCCAAGGATTTCGATAAGGTCTGGCCAATCTTCGATTCCGCGCAATCACGGGATTTTAGAAAGGTTGTGCAAGGGATCATTAGCGAGCTTGAATCGCAAGGGGCCCTTCCGAGGAGCAATTCGAGGGTTTCATCACTTGCTACATGTTGCGGACCCAGGTTTGTGGAACTTCTGTGGCAACTTTCTTTGCATGCTTTGCGAGAGGTTCATAGGCGAACATTTGCAGCTGATGTAGTTTCTAACCCACTTCCTGCATCACTGACTGATGTAGCTTTTTCACATGCAGCCACTTTACTTCCTGTCACAAAGGCTAGAATAGCACTTGAACGAAGAAGATTTCTTAAGAATGCAGAAACAGCAGTACAGAGACAGGCCATGTGGTCGAATTTGGCTCATGAAATGACTGCAGAGTTTCGTGGTCTTTGTGCTGAAGAGGCTTATTTACAGCAAGAACTGGAAAAATTACATGACCTTAGGAACAAAGTGAAGTTGGAAGGGGAACACTGGGATGATCTTGTTTCTAGTTCGAGTCAGAATTCCCATTTAGTATCGAAAGCTACTCGTTTGTGGGAGTCTATATTAGCCCGTAAAAGTCAACATGAAGTTCTTGCTTCAGGCCCTATTGAGGATTTAATAGCTCACAGGGAGCATAGGTACCGCATCTCTGGATCGTCTTTGCTTGCAGCTATGGATCAGAGTTCTCAGGTTCCTTATGGAGATGTCTTATCTGTCCAGTCTGGTGACTTTACTCCAACACATGTGGATGGCAAGGAACAAATTGATGGAGCAGATTCATCCCATTCACAAGTAAATGATGAAAGAAGTGGAAGAGTGCACCCAACCGTTGACGTGGCAGAAATTATCAGGCGCTGGACGCATGCATTGCAGCGTATTCATAAACAATCACTTCACATGGCAAAGGCTAATGAGGGGGAGGGTCCAGAAATTTTAAGAAGTGCACGTGATGGTAGTTCAAGTGGTCATGCAGAGTCTTTAGCTGCAACTCTTGCTGAACATCAGCAACACTTGGTTAGCTTTCAGGTTCTCATTAACCAACTGAAGGAAGTTGCTCCGGCAATACAAAAGTCAATATCAGAATGTACAGATAAAGTAGATAGCATTTCGTCTAGTCTACCTCCGATGTCCAAACAACCTGGTCGATCAAATTCACCTATTCAAGCACAGAGCAGTGGAAGGACATTGGAGAGCAACACTGATGATGTGGCTGAGGTGACTTCAAAATTGTCTACCGTTCAGCTCGAAAAGGTGTCATCCAGCCCTACTTTAAAGCTCCCACAGTTGTTTAACTTGACCCCTAATTCTTCTGGGAAAGGTGCAAATATGCATAAGCGCCCTGCTTCAGTTGCTCAATCAAACCAAATAGAGAACTTTCCTGAAAGGAAGTCTGTGGAGCAGCCTCTTTCAAATAATCACTTAGATAATCTACAACAAGATAGTGACAATTATTATGTCCAGAATCTAAAGAGATCTGTTAGAGAAGCTGCTCTGTCACGGAACTCCTTAAGTTCCAAATCATCACAAGGCAGCCATTCTGATGAAAGCTCTGAGCATTTCTTTTTACCTCTTTCACCATCTGGGTTTTCTCGTCTAGGCCAAGAATCTAAAGGGGCTTCACTAAGGAGTAAAAGGTTTCCATCTCAGACGGAGGCTTCCTTTCATGAAAAGCGTGCTCATGATGGTAATGTGGGGAGCAAGTACGCTGAATTATCTGAAGTATTGAATGGTTTAGATTCACTTGATGATTATGACCAAGTAAATGGGTTTCTTTCGGCTGCTGGTTCAAACTGTGCTGTTTCAGACACACAGAGATCATTTTATGACTTCGAAGAAGCTCAGGAGCAGGTTTTCTCACCTCCTTTGCTAATGGACTCATCACTATTAGCAGATTATGAGGACTTACTTGCACCACTTTCAGAAACTGAAACAGCCTTAATGGAGCACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005819 GO:0005856 GO:0006996 GO:0007010 GO:0007017 GO:0007275 GO:0008017 GO:0008092 GO:0008150 GO:0009524 GO:0009553 GO:0009555 GO:0009561 GO:0009987 GO:0015630 GO:0015631 GO:0016043 GO:0032501 GO:0032502 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0048229 GO:0048856 GO:0051011 GO:0055046 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HAUS6_N

Protein Analysis

725

Amino Acids

79.98

Weight (kDa)

5.81

Isoelectric Point (pI)

56.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HAUS6_N	PF14661	17 - 261	2e-43	HAUS augmin-like complex subunit 6 N-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002442)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G40740
fragaria_vesca	FvH4_6g52640 FvH4_6g52640 FvH4_6g52640 FvH4_6g52640 FvH4_6g52640 FvH4_6g52640
malus_domestica	MD09G1017400.v1.1 MD17G1018200.v1.1
prunus_persica	Prupe.3G299500_v2.0.a1 Prupe.3G299500_v2.0.a1
pyrus_communis	pycom111g01430 pycom17g01460 pycom17g01470
rosa_chinensis	RchiOBHm_Chr2g0096321 RchiOBHm_Chr2g0166591 RchiOBHm_Chr2g0174171 RchiOBHm_Chr5g0045391 RchiOBHm_Chr6g0248711
rosa_laevigata	RLG00000022253
rosa_multiflora	Rmu_sc0002045.1_g000024 Rmu_ssc0000100.1_g000024 Rmu_ssc0000198.1_g000004
rosa_roxburghii	Rroxscaffold_2G00078390 Rroxscaffold_3G00231180
rosa_rugosa	Rorug02G0575600 Rorug02G0575600
rosa_samantha	Rh2AG655000 Rh2BG666200 Rh2CG630400 Rh2DG680800 Rh4CG097900 Rh5BG312100 Rh5BG536100 Rh5BG536300 Rh5CG559500 Rh5DG322800 Rh6CG160100
rosa_wichuraiana	Rw2G053760 Rw6G003620 Rw7G025810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	2062
Acc65I	GGTACC	1 cut(s)	864
AccB1I	GGYRCC	1 cut(s)	864
AccI	GTMKAC	2 cut(s)	1342, 1457
AccII	CGCG	1 cut(s)	251
AciI	CCGC	5 cut(s)	136, 210, 249, 360, 868
AclWI	GGATC	5 cut(s)	74, 87, 293, 886, 909
AcoI	YGGCCR	1 cut(s)	233
AcsI	RAATTY	4 cut(s)	595, 745, 1155, 1375
AcuI	CTGAAG	5 cut(s)	660, 807, 1289, 1554, 1962
AcvI	CACGTG	1 cut(s)	1172
AfaI	GTAC	5 cut(s)	53, 573, 866, 1312, 1928
AfiI	CCNNNNNNNGG	7 cut(s)	120, 125, 154, 155, 321, 835, 1270
AflII	CTTAAG	2 cut(s)	551, 1732
AflIII	ACRYGT	2 cut(s)	353, 967
AgsI	TTSAA	9 cut(s)	206, 302, 536, 1185, 1388, 1449, 1635, 1951, 2013
AjiI	CACGTC	1 cut(s)	1060
AjnI	CCWGG	2 cut(s)	365, 1363
AjuI	GAANNNNNNNTTGG	2 cut(s)	229, 261
Alw21I	GWGCWC	4 cut(s)	1047, 1171, 1903, 2172
Alw26I	GTCTC	1 cut(s)	571
Alw44I	GTGCAC	2 cut(s)	1043, 1167
AlwI	GGATC	5 cut(s)	74, 87, 293, 886, 909
AlwNI	CAGNNNCTG	2 cut(s)	1080, 2150
Ama87I	CYCGRG	1 cut(s)	120
AoxI	GGCC	6 cut(s)	196, 233, 312, 582, 826, 1822
ApaI	GGGCCC	1 cut(s)	316
ApaLI	GTGCAC	2 cut(s)	1043, 1167
ApeKI	GCWGC	9 cut(s)	434, 494, 893, 1096, 1208, 1624, 1712, 1755, 2003
ApoI	RAATTY	4 cut(s)	595, 745, 1155, 1375
Asp718I	GGTACC	1 cut(s)	864
AspLEI	GCGC	3 cut(s)	253, 1080, 1563
AspS9I	GGNCC	6 cut(s)	197, 312, 313, 362, 827, 1148
AsuHPI	GGTGA	5 cut(s)	962, 1371, 1453, 1791, 2073
AsuII	TTCGAA	1 cut(s)	2055
AvaI	CYCGRG	1 cut(s)	120
AvaII	GGWCC	2 cut(s)	362, 1148
AxyI	CCTNAGG	1 cut(s)	683
BaeGI	GKGCMC	3 cut(s)	316, 1047, 1171
BalI	TGGCCA	1 cut(s)	235
BamHI	GGATCC	1 cut(s)	79
BanI	GGYRCC	1 cut(s)	864
BanII	GRGCYC	2 cut(s)	99, 316
BbrPI	CACGTG	1 cut(s)	1172
Bbv12I	GWGCWC	4 cut(s)	1047, 1171, 1903, 2172
BbvCI	CCTCAGC	1 cut(s)	1437
BbvI	GCAGC	9 cut(s)	446, 506, 905, 1108, 1195, 1636, 1699, 1767, 1990
BccI	CCATC	6 cut(s)	968, 986, 1169, 1810, 1873, 1901
BciT130I	CCWGG	2 cut(s)	367, 1365
BcoDI	GTCTC	1 cut(s)	571
BfaI	CTAG	5 cut(s)	38, 522, 732, 1338, 1820
BfmI	CTRYAG	1 cut(s)	615
BfoI	RGCGCY	2 cut(s)	1081, 1564
BfrI	CTTAAG	2 cut(s)	551, 1732
BfuAI	ACCTGC	1 cut(s)	2062
BglII	AGATCT	1 cut(s)	1697
BisI	GCNGC	9 cut(s)	435, 495, 894, 1097, 1209, 1625, 1713, 1756, 2004
BlsI	GCNGC	9 cut(s)	436, 496, 895, 1098, 1210, 1626, 1714, 1757, 2005
Bme1390I	CCNGG	2 cut(s)	367, 1365
Bme18I	GGWCC	2 cut(s)	362, 1148
BmeT110I	CYCGRG	1 cut(s)	120
BmgBI	CACGTC	1 cut(s)	1060
BmgT120I	GGNCC	6 cut(s)	197, 312, 313, 362, 827, 1148
BmiI	GGNNCC	8 cut(s)	81, 106, 313, 314, 364, 866, 918, 1149
BmrFI	CCNGG	2 cut(s)	367, 1365
BmrI	ACTGGG	1 cut(s)	724
BmsI	GCATC	2 cut(s)	473, 879
BmuI	ACTGGG	1 cut(s)	724
Bpu10I	CCTNAGC	2 cut(s)	1437, 2064
Bpu14I	TTCGAA	1 cut(s)	2055
BsaAI	YACGTR	1 cut(s)	1172
BsaJI	CCNNGG	4 cut(s)	119, 213, 320, 365
BsaXI	ACNNNNNCTCC	2 cut(s)	848, 878
Bsc4I	CCNNNNNNNGG	7 cut(s)	120, 125, 154, 155, 321, 835, 1270
Bse1I	ACTGG	3 cut(s)	669, 719, 943
Bse21I	CCTNAGG	1 cut(s)	683
Bse3DI	GCAATG	2 cut(s)	54, 1091
BseBI	CCWGG	2 cut(s)	367, 1365
BseDI	CCNNGG	4 cut(s)	119, 213, 320, 365
BseGI	GGATG	5 cut(s)	177, 724, 979, 1004, 1481
BseLI	CCNNNNNNNGG	7 cut(s)	120, 125, 154, 155, 321, 835, 1270
BseMI	GCAATG	2 cut(s)	54, 1091
BseMII	CTCAG	6 cut(s)	205, 926, 1428, 1767, 1883, 2078
BseNI	ACTGG	3 cut(s)	669, 719, 943
BseRI	GAGGAG	3 cut(s)	108, 158, 337
BseSI	GKGCMC	3 cut(s)	316, 1047, 1171
BseXI	GCAGC	9 cut(s)	446, 506, 905, 1108, 1195, 1636, 1699, 1767, 1990
Bsh1236I	CGCG	1 cut(s)	251
BshFI	GGCC	6 cut(s)	198, 235, 314, 584, 828, 1824
BshNI	GGYRCC	1 cut(s)	864
BsiHKAI	GWGCWC	4 cut(s)	1047, 1171, 1903, 2172
BsiHKCI	CYCGRG	1 cut(s)	120
BsiSI	CCGG	2 cut(s)	83, 1283
BslI	CCNNNNNNNGG	7 cut(s)	120, 125, 154, 155, 321, 835, 1270
BsmAI	GTCTC	1 cut(s)	571
BsmI	GAATGC	1 cut(s)	562
BsnI	GGCC	6 cut(s)	198, 235, 314, 584, 828, 1824
BsoBI	CYCGRG	1 cut(s)	120
Bsp119I	TTCGAA	1 cut(s)	2055
Bsp120I	GGGCCC	1 cut(s)	312
Bsp1286I	GDGCHC	6 cut(s)	99, 316, 1047, 1171, 1903, 2172
Bsp1407I	TGTACA	2 cut(s)	51, 1310
Bsp143I	GATC	8 cut(s)	79, 285, 721, 878, 901, 1370, 1697, 2039
BspACI	CCGC	5 cut(s)	136, 210, 249, 360, 868
BspANI	GGCC	6 cut(s)	198, 235, 314, 584, 828, 1824
BspCNI	CTCAG	6 cut(s)	204, 925, 1429, 1768, 1882, 2077
BspFNI	CGCG	1 cut(s)	251
BspHI	TCATGA	3 cut(s)	604, 1888, 1903
BspLI	GGNNCC	8 cut(s)	81, 106, 313, 314, 364, 866, 918, 1149
BspMAI	CTGCAG	1 cut(s)	619
BspMI	ACCTGC	1 cut(s)	2062
BspPI	GGATC	5 cut(s)	74, 87, 293, 886, 909
BspT104I	TTCGAA	1 cut(s)	2055
BspT107I	GGYRCC	1 cut(s)	864
BspTI	CTTAAG	2 cut(s)	551, 1732
BsrDI	GCAATG	2 cut(s)	54, 1091
BsrGI	TGTACA	2 cut(s)	51, 1310
BsrI	ACTGG	3 cut(s)	669, 719, 943
BssECI	CCNNGG	4 cut(s)	119, 213, 320, 365
BssMI	GATC	8 cut(s)	79, 285, 721, 878, 901, 1370, 1697, 2039
BssT1I	CCWWGG	1 cut(s)	213
Bst2UI	CCWGG	2 cut(s)	367, 1365
Bst4CI	ACNGT	5 cut(s)	62, 1054, 1462, 1509, 2018
Bst6I	CTCTTC	3 cut(s)	190, 636, 1033
BstAFI	CTTAAG	2 cut(s)	551, 1732
BstAPI	GCANNNNNTGC	3 cut(s)	406, 1093, 1217
BstAUI	TGTACA	2 cut(s)	51, 1310
BstBAI	YACGTR	1 cut(s)	1172
BstBI	TTCGAA	1 cut(s)	2055
BstC8I	GCNNGC	5 cut(s)	296, 402, 891, 1089, 1899
BstDEI	CTNAG	9 cut(s)	191, 683, 912, 1437, 1645, 1776, 1847, 1869, 2064
BstF5I	GGATG	5 cut(s)	177, 724, 979, 1004, 1481
BstFNI	CGCG	1 cut(s)	251
BstH2I	RGCGCY	2 cut(s)	1081, 1564
BstHHI	GCGC	3 cut(s)	253, 1080, 1563
BstKTI	GATC	8 cut(s)	82, 288, 724, 881, 904, 1373, 1700, 2042
BstMAI	GTCTC	1 cut(s)	571
BstMBI	GATC	8 cut(s)	79, 285, 721, 878, 901, 1370, 1697, 2039
BstMWI	GCNNNNNNNGC	9 cut(s)	304, 406, 527, 566, 644, 1084, 1093, 1217, 1574
BstNI	CCWGG	2 cut(s)	367, 1365
BstNSI	RCATGY	5 cut(s)	357, 404, 494, 971, 1091
BstSCI	CCNGG	2 cut(s)	365, 1363
BstSFI	CTRYAG	1 cut(s)	615
BstSLI	GKGCMC	3 cut(s)	316, 1047, 1171
BstUI	CGCG	1 cut(s)	251
BstV1I	GCAGC	9 cut(s)	446, 506, 905, 1108, 1195, 1636, 1699, 1767, 1990
BstX2I	RGATCY	2 cut(s)	79, 1697
BstXI	CCANNNNNNTGG	2 cut(s)	373, 1988
BstYI	RGATCY	2 cut(s)	79, 1697
Bsu36I	CCTNAGG	1 cut(s)	683
BsuRI	GGCC	6 cut(s)	198, 235, 314, 584, 828, 1824
BtrI	CACGTC	1 cut(s)	1060
BtsCI	GGATG	5 cut(s)	177, 724, 979, 1004, 1481
BtsI	GCAGTG	1 cut(s)	1405
BtsIMutI	CAGTG	5 cut(s)	467, 712, 1405, 1422, 2170
BveI	ACCTGC	1 cut(s)	2062
Cac8I	GCNNGC	5 cut(s)	296, 402, 891, 1089, 1899
CaiI	CAGNNNCTG	2 cut(s)	1080, 2150
CciI	TCATGA	3 cut(s)	604, 1888, 1903
CfoI	GCGC	3 cut(s)	253, 1080, 1563
Cfr13I	GGNCC	6 cut(s)	197, 312, 313, 362, 827, 1148
CseI	GACGC	1 cut(s)	1093
CsiI	ACCWGGT	1 cut(s)	1363
Csp6I	GTAC	5 cut(s)	52, 572, 865, 1311, 1927
CspCI	CAANNNNNGTGG	2 cut(s)	951, 986
CviQI	GTAC	5 cut(s)	52, 572, 865, 1311, 1927
DdeI	CTNAG	9 cut(s)	191, 683, 912, 1437, 1645, 1776, 1847, 1869, 2064
DpnI	GATC	8 cut(s)	81, 287, 723, 880, 903, 1372, 1699, 2041
DpnII	GATC	8 cut(s)	79, 285, 721, 878, 901, 1370, 1697, 2039
DraI	TTTAAA	1 cut(s)	1497
EaeI	YGGCCR	1 cut(s)	233
Eam1104I	CTCTTC	3 cut(s)	190, 636, 1033
EarI	CTCTTC	3 cut(s)	190, 636, 1033
EciI	GGCGGA	2 cut(s)	125, 199
Eco130I	CCWWGG	1 cut(s)	213
Eco24I	GRGCYC	2 cut(s)	99, 316
Eco47I	GGWCC	2 cut(s)	362, 1148
Eco57I	CTGAAG	5 cut(s)	660, 807, 1289, 1554, 1962
Eco72I	CACGTG	1 cut(s)	1172
Eco81I	CCTNAGG	1 cut(s)	683
Eco88I	CYCGRG	1 cut(s)	120
EcoO109I	RGGNCCY	3 cut(s)	312, 313, 827
EcoRI	GAATTC	1 cut(s)	745
EcoRII	CCWGG	2 cut(s)	365, 1363
EcoT14I	CCWWGG	1 cut(s)	213
EcoT22I	ATGCAT	2 cut(s)	1093, 1557
EcoT38I	GRGCYC	2 cut(s)	99, 316
ErhI	CCWWGG	1 cut(s)	213
FalI	AAGNNNNNCTT	2 cut(s)	300, 332
FblI	GTMKAC	2 cut(s)	1342, 1457
Fnu4HI	GCNGC	9 cut(s)	435, 495, 894, 1097, 1209, 1625, 1713, 1756, 2004
FokI	GGATG	5 cut(s)	164, 731, 986, 991, 1468
FriOI	GRGCYC	2 cut(s)	99, 316
Fsp4HI	GCNGC	9 cut(s)	435, 495, 894, 1097, 1209, 1625, 1713, 1756, 2004
FspBI	CTAG	5 cut(s)	38, 522, 732, 1338, 1820
GlaI	GCGC	3 cut(s)	252, 1079, 1562
GluI	GCNGC	9 cut(s)	435, 495, 894, 1097, 1209, 1625, 1713, 1756, 2004
HaeII	RGCGCY	2 cut(s)	1081, 1564
HaeIII	GGCC	6 cut(s)	198, 235, 314, 584, 828, 1824
HapII	CCGG	2 cut(s)	83, 1283
HgaI	GACGC	1 cut(s)	1093
HhaI	GCGC	3 cut(s)	253, 1080, 1563
Hin6I	GCGC	3 cut(s)	251, 1078, 1561
HinP1I	GCGC	3 cut(s)	251, 1078, 1561
HincII	GTYRAC	2 cut(s)	806, 1057
HindII	GTYRAC	2 cut(s)	806, 1057
HpaII	CCGG	2 cut(s)	83, 1283
HphI	GGTGA	5 cut(s)	962, 1371, 1453, 1791, 2073
Hpy166II	GTNNAC	7 cut(s)	54, 806, 1045, 1057, 1169, 1343, 1458
Hpy188III	TCNNGA	8 cut(s)	605, 876, 1151, 1604, 1684, 1889, 1904, 2066
Hpy8I	GTNNAC	7 cut(s)	54, 806, 1045, 1057, 1169, 1343, 1458
HpyAV	CCTTC	5 cut(s)	13, 326, 698, 1264, 1398
HpyCH4III	ACNGT	5 cut(s)	62, 1054, 1462, 1509, 2018
HpyCH4IV	ACGT	2 cut(s)	1059, 1171
HpyF10VI	GCNNNNNNNGC	9 cut(s)	304, 406, 527, 566, 644, 1084, 1093, 1217, 1574
HpyF3I	CTNAG	9 cut(s)	191, 683, 912, 1437, 1645, 1776, 1847, 1869, 2064
HpySE526I	ACGT	2 cut(s)	1059, 1171
HspAI	GCGC	3 cut(s)	251, 1078, 1561
KpnI	GGTACC	1 cut(s)	868
Kzo9I	GATC	8 cut(s)	79, 285, 721, 878, 901, 1370, 1697, 2039
Lsp1109I	GCAGC	9 cut(s)	446, 506, 905, 1108, 1195, 1636, 1699, 1767, 1990
LweI	GCATC	2 cut(s)	473, 879
MabI	ACCWGGT	1 cut(s)	1363
MaeI	CTAG	5 cut(s)	38, 522, 732, 1338, 1820
MaeII	ACGT	2 cut(s)	1059, 1171
MaeIII	GTNAC	5 cut(s)	511, 950, 1441, 1667, 1719
MalI	GATC	8 cut(s)	81, 287, 723, 880, 903, 1372, 1699, 2041
MboI	GATC	8 cut(s)	79, 285, 721, 878, 901, 1370, 1697, 2039
MboII	GAAGA	9 cut(s)	124, 177, 232, 552, 555, 653, 1050, 1524, 2069
MflI	RGATCY	2 cut(s)	79, 1697
MhlI	GDGCHC	6 cut(s)	99, 316, 1047, 1171, 1903, 2172
MlsI	TGGCCA	1 cut(s)	235
MluNI	TGGCCA	1 cut(s)	235
MlyI	GAGTC	4 cut(s)	748, 791, 1208, 2093
MmeI	TCCRAC	4 cut(s)	57, 168, 681, 986
Mox20I	TGGCCA	1 cut(s)	235
Mph1103I	ATGCAT	2 cut(s)	1093, 1557
MscI	TGGCCA	1 cut(s)	235
MseI	TTAA	8 cut(s)	552, 842, 1160, 1260, 1496, 1515, 1733, 2162
MslI	CAYNNNNRTG	3 cut(s)	717, 972, 1764
Msp20I	TGGCCA	1 cut(s)	235
MspA1I	CMGCKG	1 cut(s)	437
MspCI	CTTAAG	2 cut(s)	551, 1732
MspI	CCGG	2 cut(s)	83, 1283
MspR9I	CCNGG	2 cut(s)	367, 1365
Mva1269I	GAATGC	1 cut(s)	562
MvaI	CCWGG	2 cut(s)	367, 1365
MvnI	CGCG	1 cut(s)	251
MwoI	GCNNNNNNNGC	9 cut(s)	304, 406, 527, 566, 644, 1084, 1093, 1217, 1574
NdeII	GATC	8 cut(s)	79, 285, 721, 878, 901, 1370, 1697, 2039
NlaIV	GGNNCC	8 cut(s)	81, 106, 313, 314, 364, 866, 918, 1149
NmuCI	GTSAC	5 cut(s)	511, 950, 1441, 1667, 1719
NsiI	ATGCAT	2 cut(s)	1093, 1557
NspI	RCATGY	5 cut(s)	357, 404, 494, 971, 1091
NspV	TTCGAA	1 cut(s)	2055
PaeI	GCATGC	2 cut(s)	404, 1091
PagI	TCATGA	3 cut(s)	604, 1888, 1903
PciI	ACATGT	2 cut(s)	353, 967
PctI	GAATGC	1 cut(s)	562
PfeI	GAWTC	6 cut(s)	245, 302, 1001, 1687, 1829, 1961
PkrI	GCNGC	9 cut(s)	436, 496, 895, 1098, 1210, 1626, 1714, 1757, 2005
PleI	GAGTC	4 cut(s)	747, 790, 1207, 2093
PmaCI	CACGTG	1 cut(s)	1172
PmlI	CACGTG	1 cut(s)	1172
PpsI	GAGTC	4 cut(s)	747, 790, 1207, 2093
Ppu21I	YACGTR	1 cut(s)	1172
PscI	ACATGT	2 cut(s)	353, 967
Psp6I	CCWGG	2 cut(s)	365, 1363
PspCI	CACGTG	1 cut(s)	1172
PspGI	CCWGG	2 cut(s)	365, 1363
PspN4I	GGNNCC	8 cut(s)	81, 106, 313, 314, 364, 866, 918, 1149
PspOMI	GGGCCC	1 cut(s)	312
PspPI	GGNCC	6 cut(s)	197, 312, 313, 362, 827, 1148
PstI	CTGCAG	1 cut(s)	619
PstNI	CAGNNNCTG	2 cut(s)	1080, 2150
PsuI	RGATCY	2 cut(s)	79, 1697
PvuII	CAGCTG	1 cut(s)	437
RsaI	GTAC	5 cut(s)	53, 573, 866, 1312, 1928
RsaNI	GTAC	5 cut(s)	52, 572, 865, 1311, 1927
RseI	CAYNNNNRTG	3 cut(s)	717, 972, 1764
SaqAI	TTAA	8 cut(s)	552, 842, 1160, 1260, 1496, 1515, 1733, 2162
SatI	GCNGC	9 cut(s)	435, 495, 894, 1097, 1209, 1625, 1713, 1756, 2004
Sau3AI	GATC	8 cut(s)	79, 285, 721, 878, 901, 1370, 1697, 2039
Sau96I	GGNCC	6 cut(s)	197, 312, 313, 362, 827, 1148
SchI	GAGTC	4 cut(s)	748, 791, 1208, 2093
ScrFI	CCNGG	2 cut(s)	367, 1365
SduI	GDGCHC	6 cut(s)	99, 316, 1047, 1171, 1903, 2172
SexAI	ACCWGGT	1 cut(s)	1363
SfaNI	GCATC	2 cut(s)	473, 879
SfcI	CTRYAG	1 cut(s)	615
SfuI	TTCGAA	1 cut(s)	2055
SinI	GGWCC	2 cut(s)	362, 1148
SmiMI	CAYNNNNRTG	3 cut(s)	717, 972, 1764
SmlI	CTYRAG	2 cut(s)	551, 1732
SmoI	CTYRAG	2 cut(s)	551, 1732
SphI	GCATGC	2 cut(s)	404, 1091
SsiI	CCGC	5 cut(s)	136, 210, 249, 360, 868
SspMI	CTAG	5 cut(s)	38, 522, 732, 1338, 1820
StyD4I	CCNGG	2 cut(s)	365, 1363
StyI	CCWWGG	1 cut(s)	213
TaaI	ACNGT	5 cut(s)	62, 1054, 1462, 1509, 2018
TaiI	ACGT	2 cut(s)	1062, 1174
TaqI	TCGA	9 cut(s)	222, 243, 332, 593, 737, 761, 1369, 1470, 2055
TatI	WGTACW	3 cut(s)	51, 571, 1310
TfiI	GAWTC	6 cut(s)	245, 302, 1001, 1687, 1829, 1961
Tru1I	TTAA	8 cut(s)	552, 842, 1160, 1260, 1496, 1515, 1733, 2162
Tru9I	TTAA	8 cut(s)	552, 842, 1160, 1260, 1496, 1515, 1733, 2162
TscAI	CASTG	4 cut(s)	474, 719, 1405, 1429
TseFI	GTSAC	5 cut(s)	511, 950, 1441, 1667, 1719
TseI	GCWGC	9 cut(s)	434, 494, 893, 1096, 1208, 1624, 1712, 1755, 2003
Tsp45I	GTSAC	5 cut(s)	511, 950, 1441, 1667, 1719
TspGWI	ACGGA	2 cut(s)	1738, 1889
TspRI	CASTG	4 cut(s)	474, 719, 1405, 1429
Vha464I	CTTAAG	2 cut(s)	551, 1732
VneI	GTGCAC	2 cut(s)	1043, 1167
VpaK11BI	GGWCC	2 cut(s)	362, 1148
XapI	RAATTY	4 cut(s)	595, 745, 1155, 1375
XceI	RCATGY	5 cut(s)	357, 404, 494, 971, 1091
XcmI	CCANNNNNNNNNTGG	1 cut(s)	151
XmiI	GTMKAC	2 cut(s)	1342, 1457
XspI	CTAG	5 cut(s)	38, 522, 732, 1338, 1820
Zsp2I	ATGCAT	2 cut(s)	1093, 1557

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.