Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

SuperScaffold_111

Orthogroup ID

OG0002442

Physical Location & Seq

Genomic Coordinates Forward (+)

916840 .. 922193

Gene Structure 5354 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom111g01430.14

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2466 bp

ATGGCCGGCAATACTGTAACATTATCGCACGTCAGCACCTTTCAAATTCTCCAACCGGTCCCTCTACATTACCCTATTTCAAAAACAACCCCAACTTATTCAAAAACTCAGACGCGTTTCGCAAATACGAAAACTCTCCAGGGACCTGCATTTCAAAAAAAAACCCAAAAAAAACCCCAAAAAATTGAAAAAAAAAAAAACCTGATTCAGAACGGAGCAGAAAAGCGAGAAACAGAGGAGAGAGAGGGAGAGGAGAGGGAGAGGAGAGGGAGAGGGAGAGGGAGGTTGGTGATGACAATGGACAGAGAGAAGGAGAGAGAGATAGAGCTAGAGAGTGCAATGTACACTAACTGTTTGCTGTTAGGGTTGGATCCGGCGATTATCGGGCTCGGAGGATCCAATGCCACTCCTCGGGTCGGGCTCTTCCGCCACTCCAACCCTAAATTGGGCGAACAGCTCCTCTACTTCATCCTCTCTTCTCTCAGAGGCCCAATTCAATCCGCCAAGGATTTCGATAAGGTCTGGCCAATCTTCGATTCCGCGCAATCGCGGGATTTTCGAAAGGTTGTGCAAGGGATCATTAGTGAGCTCGAATCGCAGGGGGCGCTTCCGAGGAGCAATTCGAGGGTTTCATCACTTGCTACGTGTTGCGGACCGAGGTTTGTGGAACTTCTGTGGCAACTTTCGTTGCATGGTTTGCGAGAGGTTCATAGGCGAACATTTGCAGCTGATGTAGCTTCTAACCCACTTCCTTCATCACTGACGGATGTAGCCTTTTCACACGCAGCTACTTTACTTCCTGTTACTAAGGCTAGAATAGCGCTTGAACGAAGAAGATTTCTTAAGAATGCAGAAACAGCAGTACAGAGACAGGCCATGTGGTCGAATTTGGCGCATGAAATGACTGCGGAGTTTCGTGGTCTTTGTGCTGAAGAGGCTTATTTACAGCAAGAACTGGAAAAATTACATGACCTTAGGAACAAAGTGAAGTTGGAAGGGGAACACTGGGATGACCTTGTTTCTAGTTCGAGTCAGAATTCCCATTTAGTATCAAAAGCTACTCGTCTGTGGGAGTCTATATTAGCCCGTAAAAGTCAACATGAAGTTCTTGCTTCAGGCCCTATTGAGGACTTAATAGCTCACAGGGAGCATAGGTACCGCATCTCTGGATCATCTTTGCTTGCAGCTATCGATCAGAGTTCTCAGGTTCCTTATGGAGATGTCTTATCTTTCCAGTCTGGTGACTTTATTCCAACACATGCGGATGGAAAAGAACAAAATGATGGAGCAGATTCATCCCATTCACAAGTAGCAGATGAAAGAAGTGGAAGAGTCCATCCAACTGTTGACGTGGCAGAAATTATCAGGCGTTGGACGCATGCTTTACAGCGTATTCATAAACAATCACTTCACATGGCAAAGGCTAATGAGGGAGAGGGTCCAGAAATTTTAAGAAGTGCACAGGATGGCAGTTCAAGTGGTCATGCTGAGTCTCTAGCTGCAACTCTTGCTGAACATCAGCAACACTTGGTTAGCTTTCAGGTTCTCATTAACCAACTGAAGGAAGTTGCTCCGGCAATACAAAGGTCAATATCAGAATGTACAGATAAAGTAGATAGCATTTCATCTAGTCTGCCTCCGATGACCAAACAACCTGGTCGGTCAACTTCACCTATTCAAGCACAGAGCAGTGGAAGGACATTGGAAAGCAACAGTGATGATGTGGCTGAGGTGACTTCAAAATTGTCTACCTTTCAGCTCGAAAAGGTGTCATCCAGCCCTGCTTTAAAGCTCCCACAGTTGTTTAACTTGACTTCTAATTCTTCTGGGAAAGGTGCAAATATGCATAAGCGCCCTGCTTCAGTTGCTCATTCAAACCAAATAGAGAACTTTCCTGAAAGGAAGTCTGTGGAGCAGCCTTTATCAAATAATCACATAGATAATCTACCACAAGACAGTGACAATTATTATGTCCAGAATCTAAAGAGATCTGTTAGAGAAGCTGCGCTGTCACAGAATTCCTTAAGTTCCGAATCATCACGAGGCAGCCATTCTGATGAAAGCTCTGAGCATTTCTTTTTACCTCTTTCATCATCTGGGTTTTCTCGTCTAGGCCAAGAGTCTAAAGGGGCTTCATTAAGGAGTAAAAGGTTTTCAGCTCAGACCGAGGCTTCCTTTCATGAAAATCGTGCTCCTGATGGTAATGTGGGGAACAAGTACGCTGAATTATCTGAAGCGTTGAATGATTTAGATTCACTTGATGATTTTGACCAAGTAAATGGGTTTCTTTCCGCTGCTGGTTCAAACTGTGCTGTTTTGGACAGACAGAGATCATTTTATGACTTTGAGGAAGCTCGGGAGCAGGTTTTCTCACCTCCTTTGCTAATGGACTCATCACTATTAGCAGATTATGAAGACTTACTTGCACCACTTTCAGAAACTGAAACAGCCTTAATGGAGCACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005819 GO:0005856 GO:0006996 GO:0007010 GO:0007017 GO:0007275 GO:0008017 GO:0008092 GO:0008150 GO:0009524 GO:0009553 GO:0009555 GO:0009561 GO:0009987 GO:0015630 GO:0015631 GO:0016043 GO:0032501 GO:0032502 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0048229 GO:0048856 GO:0051011 GO:0055046 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HAUS6_N

Protein Analysis

822

Amino Acids

91.04

Weight (kDa)

6.32

Isoelectric Point (pI)

54.93

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002442)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G40740
fragaria_vesca	FvH4_6g52640 FvH4_6g52640 FvH4_6g52640 FvH4_6g52640 FvH4_6g52640 FvH4_6g52640
malus_domestica	MD09G1017400.v1.1 MD17G1018200.v1.1
prunus_persica	Prupe.3G299500_v2.0.a1 Prupe.3G299500_v2.0.a1
pyrus_communis	pycom111g01430 pycom17g01460 pycom17g01470
rosa_chinensis	RchiOBHm_Chr2g0096321 RchiOBHm_Chr2g0166591 RchiOBHm_Chr2g0174171 RchiOBHm_Chr5g0045391 RchiOBHm_Chr6g0248711
rosa_laevigata	RLG00000022253
rosa_multiflora	Rmu_sc0002045.1_g000024 Rmu_ssc0000100.1_g000024 Rmu_ssc0000198.1_g000004
rosa_roxburghii	Rroxscaffold_2G00078390 Rroxscaffold_3G00231180
rosa_rugosa	Rorug02G0575600 Rorug02G0575600
rosa_samantha	Rh2AG655000 Rh2BG666200 Rh2CG630400 Rh2DG680800 Rh4CG097900 Rh5BG312100 Rh5BG536100 Rh5BG536300 Rh5CG559500 Rh5DG322800 Rh6CG160100
rosa_wichuraiana	Rw2G053760 Rw6G003620 Rw7G025810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	154, 2353
Acc65I	GGTACC	1 cut(s)	1155
AccB1I	GGYRCC	1 cut(s)	1155
AccI	GTMKAC	1 cut(s)	1748
AccII	CGCG	3 cut(s)	115, 542, 550
AciI	CCGC	9 cut(s)	427, 501, 540, 550, 651, 908, 1159, 1262, 2292
AclWI	GGATC	6 cut(s)	365, 378, 390, 403, 584, 1177
AcoI	YGGCCR	2 cut(s)	3, 524
AcsI	RAATTY	5 cut(s)	45, 886, 1036, 1446, 2017
AcuI	CTGAAG	5 cut(s)	951, 1098, 1580, 1845, 2253
AfaI	GTAC	5 cut(s)	344, 864, 1157, 1603, 2219
AfeI	AGCGCT	1 cut(s)	822
AfiI	CCNNNNNNNGG	6 cut(s)	411, 416, 445, 446, 1126, 1561
AflII	CTTAAG	2 cut(s)	842, 2023
AflIII	ACRYGT	2 cut(s)	113, 644
AgeI	ACCGGT	1 cut(s)	55
AjiI	CACGTC	2 cut(s)	31, 1351
AjnI	CCWGG	2 cut(s)	138, 1654
AjuI	GAANNNNNNNTTGG	2 cut(s)	520, 552
Alw21I	GWGCWC	4 cut(s)	591, 1462, 2194, 2463
Alw26I	GTCTC	2 cut(s)	862, 1497
Alw44I	GTGCAC	1 cut(s)	1458
AlwI	GGATC	6 cut(s)	365, 378, 390, 403, 584, 1177
AlwNI	CAGNNNCTG	1 cut(s)	2441
Ama87I	CYCGRG	2 cut(s)	411, 2355
Aor51HI	AGCGCT	1 cut(s)	822
AoxI	GGCC	6 cut(s)	3, 487, 524, 873, 1117, 2113
ApaLI	GTGCAC	1 cut(s)	1458
ApeKI	GCWGC	8 cut(s)	725, 785, 1184, 1499, 1915, 2003, 2046, 2294
ApoI	RAATTY	5 cut(s)	45, 886, 1036, 1446, 2017
AsiGI	ACCGGT	1 cut(s)	55
Asp718I	GGTACC	1 cut(s)	1155
AspLEI	GCGC	6 cut(s)	544, 607, 823, 895, 1854, 2008
AspS9I	GGNCC	6 cut(s)	58, 143, 488, 653, 1118, 1439
AsuHPI	GGTGA	5 cut(s)	301, 1253, 1662, 1744, 2364
AsuII	TTCGAA	1 cut(s)	559
AvaI	CYCGRG	2 cut(s)	411, 2355
AvaII	GGWCC	4 cut(s)	58, 143, 653, 1439
AxyI	CCTNAGG	1 cut(s)	974
BaeGI	GKGCMC	1 cut(s)	1462
BalI	TGGCCA	1 cut(s)	526
BamHI	GGATCC	2 cut(s)	370, 395
BanI	GGYRCC	1 cut(s)	1155
BanII	GRGCYC	3 cut(s)	390, 423, 591
BauI	CACGAG	1 cut(s)	2040
BbsI	GAAGAC	1 cut(s)	2421
Bbv12I	GWGCWC	4 cut(s)	591, 1462, 2194, 2463
BbvCI	CCTCAGC	1 cut(s)	1728
BbvI	GCAGC	8 cut(s)	737, 797, 1196, 1486, 1927, 1990, 2058, 2281
BccI	CCATC	5 cut(s)	1259, 1277, 1344, 1460, 2192
BciT130I	CCWGG	2 cut(s)	140, 1656
BcoDI	GTCTC	2 cut(s)	862, 1497
BfaI	CTAG	6 cut(s)	329, 813, 1023, 1496, 1629, 2111
BfoI	RGCGCY	3 cut(s)	608, 824, 1855
BfrI	CTTAAG	2 cut(s)	842, 2023
BfuAI	ACCTGC	2 cut(s)	154, 2353
BglII	AGATCT	1 cut(s)	1988
BisI	GCNGC	8 cut(s)	726, 786, 1185, 1500, 1916, 2004, 2047, 2295
BlsI	GCNGC	8 cut(s)	727, 787, 1186, 1501, 1917, 2005, 2048, 2296
Bme1390I	CCNGG	2 cut(s)	140, 1656
Bme18I	GGWCC	4 cut(s)	58, 143, 653, 1439
BmeT110I	CYCGRG	2 cut(s)	411, 2355
BmgBI	CACGTC	2 cut(s)	31, 1351
BmgT120I	GGNCC	6 cut(s)	58, 143, 488, 653, 1118, 1439
BmiI	GGNNCC	7 cut(s)	60, 144, 372, 397, 1157, 1209, 1440
BmrFI	CCNGG	2 cut(s)	140, 1656
BmrI	ACTGGG	1 cut(s)	1015
BmsI	GCATC	1 cut(s)	1170
BmuI	ACTGGG	1 cut(s)	1015
BpiI	GAAGAC	1 cut(s)	2421
BpmI	CTGGAG	1 cut(s)	122
Bpu10I	CCTNAGC	1 cut(s)	1728
Bpu14I	TTCGAA	1 cut(s)	559
Bsa29I	ATCGAT	1 cut(s)	1191
BsaAI	YACGTR	1 cut(s)	645
BsaJI	CCNNGG	6 cut(s)	139, 410, 504, 611, 656, 2166
BsaWI	WCCGGW	1 cut(s)	55
BsaXI	ACNNNNNCTCC	2 cut(s)	1139, 1169
Bsc4I	CCNNNNNNNGG	6 cut(s)	411, 416, 445, 446, 1126, 1561
Bse118I	RCCGGY	2 cut(s)	5, 55
Bse1I	ACTGG	3 cut(s)	960, 1010, 1234
Bse21I	CCTNAGG	1 cut(s)	974
Bse3DI	GCAATG	1 cut(s)	345
BseBI	CCWGG	2 cut(s)	140, 1656
BseCI	ATCGAT	1 cut(s)	1191
BseDI	CCNNGG	6 cut(s)	139, 410, 504, 611, 656, 2166
BseGI	GGATG	8 cut(s)	468, 772, 1015, 1270, 1295, 1336, 1471, 1772
BseLI	CCNNNNNNNGG	6 cut(s)	411, 416, 445, 446, 1126, 1561
BseMI	GCAATG	1 cut(s)	345
BseMII	CTCAG	7 cut(s)	122, 496, 1217, 1479, 1719, 2058, 2174
BseNI	ACTGG	3 cut(s)	960, 1010, 1234
BseRI	GAGGAG	6 cut(s)	251, 266, 277, 399, 449, 628
BseSI	GKGCMC	1 cut(s)	1462
BseXI	GCAGC	8 cut(s)	737, 797, 1196, 1486, 1927, 1990, 2058, 2281
Bsh1236I	CGCG	3 cut(s)	115, 542, 550
BshFI	GGCC	6 cut(s)	5, 489, 526, 875, 1119, 2115
BshNI	GGYRCC	1 cut(s)	1155
BshTI	ACCGGT	1 cut(s)	55
BshVI	ATCGAT	1 cut(s)	1191
BsiHKAI	GWGCWC	4 cut(s)	591, 1462, 2194, 2463
BsiHKCI	CYCGRG	2 cut(s)	411, 2355
BsiSI	CCGG	4 cut(s)	6, 56, 374, 1574
BslFI	GGGAC	2 cut(s)	44, 156
BslI	CCNNNNNNNGG	6 cut(s)	411, 416, 445, 446, 1126, 1561
BsmAI	GTCTC	2 cut(s)	862, 1497
BsmFI	GGGAC	2 cut(s)	44, 156
BsmI	GAATGC	1 cut(s)	853
BsnI	GGCC	6 cut(s)	5, 489, 526, 875, 1119, 2115
BsoBI	CYCGRG	2 cut(s)	411, 2355
Bsp119I	TTCGAA	1 cut(s)	559
Bsp1286I	GDGCHC	6 cut(s)	390, 423, 591, 1462, 2194, 2463
Bsp1407I	TGTACA	2 cut(s)	342, 1601
Bsp143I	GATC	7 cut(s)	370, 395, 576, 1169, 1192, 1988, 2330
BspACI	CCGC	9 cut(s)	427, 501, 540, 550, 651, 908, 1159, 1262, 2292
BspANI	GGCC	6 cut(s)	5, 489, 526, 875, 1119, 2115
BspCNI	CTCAG	7 cut(s)	121, 495, 1216, 1480, 1720, 2059, 2173
BspDI	ATCGAT	1 cut(s)	1191
BspFNI	CGCG	3 cut(s)	115, 542, 550
BspHI	TCATGA	1 cut(s)	2179
BspLI	GGNNCC	7 cut(s)	60, 144, 372, 397, 1157, 1209, 1440
BspMI	ACCTGC	2 cut(s)	154, 2353
BspPI	GGATC	6 cut(s)	365, 378, 390, 403, 584, 1177
BspQI	GCTCTTC	1 cut(s)	428
BspT104I	TTCGAA	1 cut(s)	559
BspT107I	GGYRCC	1 cut(s)	1155
BspTI	CTTAAG	2 cut(s)	842, 2023
BsrDI	GCAATG	1 cut(s)	345
BsrFI	RCCGGY	2 cut(s)	5, 55
BsrGI	TGTACA	2 cut(s)	342, 1601
BsrI	ACTGG	3 cut(s)	960, 1010, 1234
BssAI	RCCGGY	2 cut(s)	5, 55
BssECI	CCNNGG	6 cut(s)	139, 410, 504, 611, 656, 2166
BssMI	GATC	7 cut(s)	370, 395, 576, 1169, 1192, 1988, 2330
BssSI	CACGAG	1 cut(s)	2040
BssT1I	CCWWGG	1 cut(s)	504
Bst2BI	CACGAG	1 cut(s)	2040
Bst2UI	CCWGG	2 cut(s)	140, 1656
Bst4CI	ACNGT	7 cut(s)	16, 353, 1345, 1715, 1800, 1958, 2309
Bst6I	CTCTTC	4 cut(s)	428, 481, 927, 1324
BstAFI	CTTAAG	2 cut(s)	842, 2023
BstAPI	GCANNNNNTGC	2 cut(s)	697, 1508
BstAUI	TGTACA	2 cut(s)	342, 1601
BstBAI	YACGTR	1 cut(s)	645
BstBI	TTCGAA	1 cut(s)	559
BstC8I	GCNNGC	3 cut(s)	7, 1182, 1380
BstDEI	CTNAG	9 cut(s)	108, 482, 807, 974, 1203, 1488, 1728, 2067, 2160
BstF5I	GGATG	8 cut(s)	468, 772, 1015, 1270, 1295, 1336, 1471, 1772
BstFNI	CGCG	3 cut(s)	115, 542, 550
BstH2I	RGCGCY	3 cut(s)	608, 824, 1855
BstHHI	GCGC	6 cut(s)	544, 607, 823, 895, 1854, 2008
BstKTI	GATC	7 cut(s)	373, 398, 579, 1172, 1195, 1991, 2333
BstMAI	GTCTC	2 cut(s)	862, 1497
BstMBI	GATC	7 cut(s)	370, 395, 576, 1169, 1192, 1988, 2330
BstNI	CCWGG	2 cut(s)	140, 1656
BstNSI	RCATGY	2 cut(s)	1262, 1382
BstSCI	CCNGG	2 cut(s)	138, 1654
BstSLI	GKGCMC	1 cut(s)	1462
BstUI	CGCG	3 cut(s)	115, 542, 550
BstV1I	GCAGC	8 cut(s)	737, 797, 1196, 1486, 1927, 1990, 2058, 2281
BstV2I	GAAGAC	1 cut(s)	2421
BstX2I	RGATCY	3 cut(s)	370, 395, 1988
BstXI	CCANNNNNNTGG	1 cut(s)	2279
BstYI	RGATCY	3 cut(s)	370, 395, 1988
Bsu15I	ATCGAT	1 cut(s)	1191
Bsu36I	CCTNAGG	1 cut(s)	974
BsuRI	GGCC	6 cut(s)	5, 489, 526, 875, 1119, 2115
BsuTUI	ATCGAT	1 cut(s)	1191
BtrI	CACGTC	2 cut(s)	31, 1351
BtsCI	GGATG	8 cut(s)	468, 772, 1015, 1270, 1295, 1336, 1471, 1772
BtsI	GCAGTG	1 cut(s)	1696
BtsIMutI	CAGTG	6 cut(s)	758, 1003, 1696, 1720, 1963, 2461
BveI	ACCTGC	2 cut(s)	154, 2353
Cac8I	GCNNGC	3 cut(s)	7, 1182, 1380
CaiI	CAGNNNCTG	1 cut(s)	2441
CciI	TCATGA	1 cut(s)	2179
CfoI	GCGC	6 cut(s)	544, 607, 823, 895, 1854, 2008
Cfr10I	RCCGGY	2 cut(s)	5, 55
Cfr13I	GGNCC	6 cut(s)	58, 143, 488, 653, 1118, 1439
ClaI	ATCGAT	1 cut(s)	1191
CpoI	CGGWCCG	1 cut(s)	653
CseI	GACGC	2 cut(s)	121, 1384
CsiI	ACCWGGT	1 cut(s)	1654
Csp6I	GTAC	5 cut(s)	343, 863, 1156, 1602, 2218
CspAI	ACCGGT	1 cut(s)	55
CspI	CGGWCCG	1 cut(s)	653
CviQI	GTAC	5 cut(s)	343, 863, 1156, 1602, 2218
DdeI	CTNAG	9 cut(s)	108, 482, 807, 974, 1203, 1488, 1728, 2067, 2160
DpnI	GATC	7 cut(s)	372, 397, 578, 1171, 1194, 1990, 2332
DpnII	GATC	7 cut(s)	370, 395, 576, 1169, 1192, 1988, 2330
DraI	TTTAAA	1 cut(s)	1788
EaeI	YGGCCR	2 cut(s)	3, 524
Eam1104I	CTCTTC	4 cut(s)	428, 481, 927, 1324
EarI	CTCTTC	4 cut(s)	428, 481, 927, 1324
EciI	GGCGGA	2 cut(s)	416, 490
Ecl136II	GAGCTC	1 cut(s)	589
Eco130I	CCWWGG	1 cut(s)	504
Eco24I	GRGCYC	3 cut(s)	390, 423, 591
Eco47I	GGWCC	4 cut(s)	58, 143, 653, 1439
Eco47III	AGCGCT	1 cut(s)	822
Eco53kI	GAGCTC	1 cut(s)	589
Eco57I	CTGAAG	5 cut(s)	951, 1098, 1580, 1845, 2253
Eco81I	CCTNAGG	1 cut(s)	974
Eco88I	CYCGRG	2 cut(s)	411, 2355
EcoICRI	GAGCTC	1 cut(s)	589
EcoO109I	RGGNCCY	2 cut(s)	143, 1118
EcoRI	GAATTC	2 cut(s)	1036, 2017
EcoRII	CCWGG	2 cut(s)	138, 1654
EcoT14I	CCWWGG	1 cut(s)	504
EcoT22I	ATGCAT	1 cut(s)	1848
EcoT38I	GRGCYC	3 cut(s)	390, 423, 591
ErhI	CCWWGG	1 cut(s)	504
FalI	AAGNNNNNCTT	2 cut(s)	2406, 2438
FaqI	GGGAC	2 cut(s)	44, 156
FauI	CCCGC	1 cut(s)	543
FblI	GTMKAC	1 cut(s)	1748
Fnu4HI	GCNGC	8 cut(s)	726, 786, 1185, 1500, 1916, 2004, 2047, 2295
FokI	GGATG	8 cut(s)	455, 779, 1022, 1277, 1282, 1323, 1478, 1759
FriOI	GRGCYC	3 cut(s)	390, 423, 591
Fsp4HI	GCNGC	8 cut(s)	726, 786, 1185, 1500, 1916, 2004, 2047, 2295
FspBI	CTAG	6 cut(s)	329, 813, 1023, 1496, 1629, 2111
GlaI	GCGC	6 cut(s)	543, 606, 822, 894, 1853, 2007
GluI	GCNGC	8 cut(s)	726, 786, 1185, 1500, 1916, 2004, 2047, 2295
GsuI	CTGGAG	1 cut(s)	122
HaeII	RGCGCY	3 cut(s)	608, 824, 1855
HaeIII	GGCC	6 cut(s)	5, 489, 526, 875, 1119, 2115
HapII	CCGG	4 cut(s)	6, 56, 374, 1574
HgaI	GACGC	2 cut(s)	121, 1384
HhaI	GCGC	6 cut(s)	544, 607, 823, 895, 1854, 2008
Hin6I	GCGC	6 cut(s)	542, 605, 821, 893, 1852, 2006
HinP1I	GCGC	6 cut(s)	542, 605, 821, 893, 1852, 2006
HincII	GTYRAC	3 cut(s)	1097, 1348, 1665
HindII	GTYRAC	3 cut(s)	1097, 1348, 1665
HpaII	CCGG	4 cut(s)	6, 56, 374, 1574
HphI	GGTGA	5 cut(s)	301, 1253, 1662, 1744, 2364
Hpy166II	GTNNAC	6 cut(s)	345, 1097, 1348, 1460, 1665, 1749
Hpy188III	TCNNGA	8 cut(s)	1167, 1442, 1895, 1975, 2040, 2180, 2195, 2357
Hpy8I	GTNNAC	6 cut(s)	345, 1097, 1348, 1460, 1665, 1749
HpyAV	CCTTC	5 cut(s)	304, 762, 989, 1555, 1689
HpyCH4III	ACNGT	7 cut(s)	16, 353, 1345, 1715, 1800, 1958, 2309
HpyCH4IV	ACGT	3 cut(s)	30, 644, 1350
HpyF3I	CTNAG	9 cut(s)	108, 482, 807, 974, 1203, 1488, 1728, 2067, 2160
HpySE526I	ACGT	3 cut(s)	30, 644, 1350
HspAI	GCGC	6 cut(s)	542, 605, 821, 893, 1852, 2006
KpnI	GGTACC	1 cut(s)	1159
KroI	GCCGGC	1 cut(s)	5
KroNI	GCCGGC	1 cut(s)	7
Kzo9I	GATC	7 cut(s)	370, 395, 576, 1169, 1192, 1988, 2330
LguI	GCTCTTC	1 cut(s)	428
Lsp1109I	GCAGC	8 cut(s)	737, 797, 1196, 1486, 1927, 1990, 2058, 2281
LweI	GCATC	1 cut(s)	1170
MabI	ACCWGGT	1 cut(s)	1654
MaeI	CTAG	6 cut(s)	329, 813, 1023, 1496, 1629, 2111
MaeII	ACGT	3 cut(s)	30, 644, 1350
MaeIII	GTNAC	6 cut(s)	16, 802, 1241, 1732, 1958, 2010
MalI	GATC	7 cut(s)	372, 397, 578, 1171, 1194, 1990, 2332
MboI	GATC	7 cut(s)	370, 395, 576, 1169, 1192, 1988, 2330
MboII	GAAGA	9 cut(s)	415, 468, 523, 843, 846, 944, 1341, 1815, 2426
MflI	RGATCY	3 cut(s)	370, 395, 1988
MhlI	GDGCHC	6 cut(s)	390, 423, 591, 1462, 2194, 2463
MlsI	TGGCCA	1 cut(s)	526
MluI	ACGCGT	1 cut(s)	113
MluNI	TGGCCA	1 cut(s)	526
MlyI	GAGTC	6 cut(s)	1039, 1082, 1341, 1499, 2129, 2384
MmeI	TCCRAC	7 cut(s)	76, 348, 459, 972, 1277, 1352, 1364
Mox20I	TGGCCA	1 cut(s)	526
Mph1103I	ATGCAT	1 cut(s)	1848
MroNI	GCCGGC	1 cut(s)	5
MscI	TGGCCA	1 cut(s)	526
MseI	TTAA	9 cut(s)	843, 1133, 1451, 1551, 1787, 1806, 2024, 2138, 2453
MslI	CAYNNNNRTG	3 cut(s)	1008, 1263, 2055
Msp20I	TGGCCA	1 cut(s)	526
MspA1I	CMGCKG	2 cut(s)	728, 2294
MspCI	CTTAAG	2 cut(s)	842, 2023
MspI	CCGG	4 cut(s)	6, 56, 374, 1574
MspR9I	CCNGG	2 cut(s)	140, 1656
Mva1269I	GAATGC	1 cut(s)	853
MvaI	CCWGG	2 cut(s)	140, 1656
MvnI	CGCG	3 cut(s)	115, 542, 550
NaeI	GCCGGC	1 cut(s)	7
NdeII	GATC	7 cut(s)	370, 395, 576, 1169, 1192, 1988, 2330
NgoMIV	GCCGGC	1 cut(s)	5
NlaIV	GGNNCC	7 cut(s)	60, 144, 372, 397, 1157, 1209, 1440
NmuCI	GTSAC	4 cut(s)	1241, 1732, 1958, 2010
NsiI	ATGCAT	1 cut(s)	1848
NspI	RCATGY	2 cut(s)	1262, 1382
NspV	TTCGAA	1 cut(s)	559
PaeI	GCATGC	1 cut(s)	1382
PagI	TCATGA	1 cut(s)	2179
PciSI	GCTCTTC	1 cut(s)	428
PctI	GAATGC	1 cut(s)	853
PdiI	GCCGGC	1 cut(s)	7
PfeI	GAWTC	7 cut(s)	205, 536, 593, 1292, 1978, 2033, 2252
PinAI	ACCGGT	1 cut(s)	55
PkrI	GCNGC	8 cut(s)	727, 787, 1186, 1501, 1917, 2005, 2048, 2296
PleI	GAGTC	6 cut(s)	1038, 1081, 1340, 1498, 2128, 2384
PpsI	GAGTC	6 cut(s)	1038, 1081, 1340, 1498, 2128, 2384
Ppu21I	YACGTR	1 cut(s)	645
PpuMI	RGGWCCY	1 cut(s)	143
Psp124BI	GAGCTC	1 cut(s)	591
Psp5II	RGGWCCY	1 cut(s)	143
Psp6I	CCWGG	2 cut(s)	138, 1654
PspGI	CCWGG	2 cut(s)	138, 1654
PspN4I	GGNNCC	7 cut(s)	60, 144, 372, 397, 1157, 1209, 1440
PspPI	GGNCC	6 cut(s)	58, 143, 488, 653, 1118, 1439
PspPPI	RGGWCCY	1 cut(s)	143
PstNI	CAGNNNCTG	1 cut(s)	2441
PsuI	RGATCY	3 cut(s)	370, 395, 1988
PvuII	CAGCTG	1 cut(s)	728
RsaI	GTAC	5 cut(s)	344, 864, 1157, 1603, 2219
RsaNI	GTAC	5 cut(s)	343, 863, 1156, 1602, 2218
RseI	CAYNNNNRTG	3 cut(s)	1008, 1263, 2055
Rsr2I	CGGWCCG	1 cut(s)	653
RsrII	CGGWCCG	1 cut(s)	653
SacI	GAGCTC	1 cut(s)	591
SapI	GCTCTTC	1 cut(s)	428
SaqAI	TTAA	9 cut(s)	843, 1133, 1451, 1551, 1787, 1806, 2024, 2138, 2453
SatI	GCNGC	8 cut(s)	726, 786, 1185, 1500, 1916, 2004, 2047, 2295
Sau3AI	GATC	7 cut(s)	370, 395, 576, 1169, 1192, 1988, 2330
Sau96I	GGNCC	6 cut(s)	58, 143, 488, 653, 1118, 1439
SchI	GAGTC	6 cut(s)	1039, 1082, 1341, 1499, 2129, 2384
ScrFI	CCNGG	2 cut(s)	140, 1656
SduI	GDGCHC	6 cut(s)	390, 423, 591, 1462, 2194, 2463
SexAI	ACCWGGT	1 cut(s)	1654
SfaNI	GCATC	1 cut(s)	1170
SfuI	TTCGAA	1 cut(s)	559
SinI	GGWCC	4 cut(s)	58, 143, 653, 1439
SmiMI	CAYNNNNRTG	3 cut(s)	1008, 1263, 2055
SmlI	CTYRAG	2 cut(s)	842, 2023
SmoI	CTYRAG	2 cut(s)	842, 2023
SphI	GCATGC	1 cut(s)	1382
SsiI	CCGC	9 cut(s)	427, 501, 540, 550, 651, 908, 1159, 1262, 2292
SspMI	CTAG	6 cut(s)	329, 813, 1023, 1496, 1629, 2111
SstI	GAGCTC	1 cut(s)	591
StyD4I	CCNGG	2 cut(s)	138, 1654
StyI	CCWWGG	1 cut(s)	504
TaaI	ACNGT	7 cut(s)	16, 353, 1345, 1715, 1800, 1958, 2309
TaiI	ACGT	3 cut(s)	33, 647, 1353
TaqI	TCGA	9 cut(s)	513, 534, 559, 591, 623, 884, 1028, 1191, 1761
TaqII	GACCGA	3 cut(s)	670, 1650, 2180
TatI	WGTACW	3 cut(s)	342, 862, 1601
TfiI	GAWTC	7 cut(s)	205, 536, 593, 1292, 1978, 2033, 2252
Tru1I	TTAA	9 cut(s)	843, 1133, 1451, 1551, 1787, 1806, 2024, 2138, 2453
Tru9I	TTAA	9 cut(s)	843, 1133, 1451, 1551, 1787, 1806, 2024, 2138, 2453
TscAI	CASTG	5 cut(s)	765, 1010, 1696, 1720, 1963
TseFI	GTSAC	4 cut(s)	1241, 1732, 1958, 2010
TseI	GCWGC	8 cut(s)	725, 785, 1184, 1499, 1915, 2003, 2046, 2294
Tsp45I	GTSAC	4 cut(s)	1241, 1732, 1958, 2010
TspGWI	ACGGA	2 cut(s)	228, 779
TspRI	CASTG	5 cut(s)	765, 1010, 1696, 1720, 1963
Vha464I	CTTAAG	2 cut(s)	842, 2023
VneI	GTGCAC	1 cut(s)	1458
VpaK11BI	GGWCC	4 cut(s)	58, 143, 653, 1439
XapI	RAATTY	5 cut(s)	45, 886, 1036, 1446, 2017
XceI	RCATGY	2 cut(s)	1262, 1382
XcmI	CCANNNNNNNNNTGG	1 cut(s)	442
XmiI	GTMKAC	1 cut(s)	1748
XspI	CTAG	6 cut(s)	329, 813, 1023, 1496, 1629, 2111
Zsp2I	ATGCAT	1 cut(s)	1848

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.