lipid-transfer protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G44265 |
| fragaria_vesca | FvH4_4g18380 FvH4_4g18390 FvH4_6g26560 |
| malus_domestica | MD06G1108000.v1.1 MD06G1108100.v1.1 MD17G1235700.v1.1 |
| prunus_persica | Prupe.2G079300_v2.0.a1 Prupe.3G134200_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr2g0127571 RchiOBHm_Chr2g0127591 |
| rosa_laevigata | RLG00000018952 RLG00000018954 |
| rosa_multiflora | Rmu_co8172800.1_g000001 Rmu_sc0004744.1_g000004 Rmu_ssc0000200.1_g000021 |
| rosa_roxburghii | Rroxscaffold_2G00116480 Rroxscaffold_2G00116550 |
| rosa_rugosa | Rorug02G0272700 Rorug02G0273100 |
| rosa_samantha | Rh2AG324700 Rh2AG325100 Rh2BG334000 Rh2BG334400 Rh2CG312200 Rh2CG312400 Rh2CG312600 Rh2DG352200 |
| rosa_wichuraiana | Rw2G026370 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 29 |
| AclWI | GGATC | 1 cut(s) | 298 |
| AfaI | GTAC | 2 cut(s) | 95, 99 |
| AluBI | AGCT | 1 cut(s) | 313 |
| AluI | AGCT | 1 cut(s) | 313 |
| AlwI | GGATC | 1 cut(s) | 298 |
| Ama87I | CYCGRG | 1 cut(s) | 235 |
| AsuC2I | CCSGG | 1 cut(s) | 171 |
| AvaI | CYCGRG | 1 cut(s) | 235 |
| BauI | CACGAG | 1 cut(s) | 50 |
| BcnI | CCSGG | 1 cut(s) | 171 |
| BfaI | CTAG | 3 cut(s) | 69, 140, 357 |
| Bme1390I | CCNGG | 1 cut(s) | 171 |
| BmeT110I | CYCGRG | 1 cut(s) | 235 |
| BmrFI | CCNGG | 1 cut(s) | 171 |
| BpuMI | CCSGG | 1 cut(s) | 171 |
| BsaAI | YACGTR | 1 cut(s) | 97 |
| BsaJI | CCNNGG | 2 cut(s) | 236, 372 |
| BseDI | CCNNGG | 2 cut(s) | 236, 372 |
| BseMII | CTCAG | 1 cut(s) | 352 |
| BseRI | GAGGAG | 1 cut(s) | 343 |
| Bsh1236I | CGCG | 1 cut(s) | 29 |
| BsiHKCI | CYCGRG | 1 cut(s) | 235 |
| BsiSI | CCGG | 1 cut(s) | 171 |
| BsiWI | CGTACG | 1 cut(s) | 93 |
| BsoBI | CYCGRG | 1 cut(s) | 235 |
| Bsp143I | GATC | 2 cut(s) | 54, 303 |
| Bsp68I | TCGCGA | 1 cut(s) | 29 |
| BspCNI | CTCAG | 1 cut(s) | 351 |
| BspFNI | CGCG | 1 cut(s) | 29 |
| BspPI | GGATC | 1 cut(s) | 298 |
| BssECI | CCNNGG | 2 cut(s) | 236, 372 |
| BssMI | GATC | 2 cut(s) | 54, 303 |
| BssSI | CACGAG | 1 cut(s) | 50 |
| Bst2BI | CACGAG | 1 cut(s) | 50 |
| Bst4CI | ACNGT | 1 cut(s) | 376 |
| Bst6I | CTCTTC | 1 cut(s) | 324 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 366 |
| BstBAI | YACGTR | 1 cut(s) | 97 |
| BstDEI | CTNAG | 1 cut(s) | 338 |
| BstDSI | CCRYGG | 1 cut(s) | 372 |
| BstFNI | CGCG | 1 cut(s) | 29 |
| BstKTI | GATC | 2 cut(s) | 57, 306 |
| BstMBI | GATC | 2 cut(s) | 54, 303 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 366 |
| BstSCI | CCNGG | 1 cut(s) | 169 |
| BstSNI | TACGTA | 1 cut(s) | 97 |
| BstUI | CGCG | 1 cut(s) | 29 |
| BstX2I | RGATCY | 1 cut(s) | 303 |
| BstYI | RGATCY | 1 cut(s) | 303 |
| BtgI | CCRYGG | 1 cut(s) | 372 |
| BtuMI | TCGCGA | 1 cut(s) | 29 |
| Csp6I | GTAC | 2 cut(s) | 94, 98 |
| CviAII | CATG | 1 cut(s) | 361 |
| CviJI | RGCY | 4 cut(s) | 73, 241, 296, 313 |
| CviKI_1 | RGCY | 4 cut(s) | 73, 241, 296, 313 |
| CviQI | GTAC | 2 cut(s) | 94, 98 |
| DdeI | CTNAG | 1 cut(s) | 338 |
| DpnI | GATC | 2 cut(s) | 56, 305 |
| DpnII | GATC | 2 cut(s) | 54, 303 |
| Eam1104I | CTCTTC | 1 cut(s) | 324 |
| EarI | CTCTTC | 1 cut(s) | 324 |
| Eco105I | TACGTA | 1 cut(s) | 97 |
| Eco88I | CYCGRG | 1 cut(s) | 235 |
| FaeI | CATG | 1 cut(s) | 364 |
| FaiI | YATR | 7 cut(s) | 112, 118, 120, 192, 209, 279, 362 |
| FatI | CATG | 1 cut(s) | 360 |
| FauNDI | CATATG | 1 cut(s) | 118 |
| FspBI | CTAG | 3 cut(s) | 69, 140, 357 |
| HapII | CCGG | 1 cut(s) | 171 |
| Hin1II | CATG | 1 cut(s) | 364 |
| HinfI | GANTC | 1 cut(s) | 79 |
| HpaII | CCGG | 1 cut(s) | 171 |
| Hpy166II | GTNNAC | 1 cut(s) | 88 |
| Hpy188I | TCNGA | 1 cut(s) | 61 |
| Hpy188III | TCNNGA | 3 cut(s) | 28, 52, 140 |
| Hpy8I | GTNNAC | 1 cut(s) | 88 |
| HpyCH4III | ACNGT | 1 cut(s) | 376 |
| HpyCH4IV | ACGT | 1 cut(s) | 96 |
| HpyCH4V | TGCA | 2 cut(s) | 110, 327 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 366 |
| HpyF3I | CTNAG | 1 cut(s) | 338 |
| HpySE526I | ACGT | 1 cut(s) | 96 |
| Hsp92II | CATG | 1 cut(s) | 364 |
| Kzo9I | GATC | 2 cut(s) | 54, 303 |
| LmnI | GCTCC | 1 cut(s) | 374 |
| LpnPI | CCDG | 2 cut(s) | 68, 184 |
| MaeI | CTAG | 3 cut(s) | 69, 140, 357 |
| MaeII | ACGT | 1 cut(s) | 96 |
| MalI | GATC | 2 cut(s) | 56, 305 |
| MboI | GATC | 2 cut(s) | 54, 303 |
| MboII | GAAGA | 1 cut(s) | 311 |
| MflI | RGATCY | 1 cut(s) | 303 |
| MluCI | AATT | 3 cut(s) | 20, 210, 250 |
| MmeI | TCCRAC | 1 cut(s) | 331 |
| MnlI | CCTC | 5 cut(s) | 231, 266, 294, 327, 364 |
| MseI | TTAA | 2 cut(s) | 204, 379 |
| MspI | CCGG | 1 cut(s) | 171 |
| MspR9I | CCNGG | 1 cut(s) | 171 |
| MvnI | CGCG | 1 cut(s) | 29 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 366 |
| NciI | CCSGG | 1 cut(s) | 171 |
| NdeI | CATATG | 1 cut(s) | 118 |
| NdeII | GATC | 2 cut(s) | 54, 303 |
| NlaIII | CATG | 1 cut(s) | 364 |
| NruI | TCGCGA | 1 cut(s) | 29 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 57 |
| PfeI | GAWTC | 1 cut(s) | 79 |
| Pfl23II | CGTACG | 1 cut(s) | 93 |
| Ppu21I | YACGTR | 1 cut(s) | 97 |
| PspLI | CGTACG | 1 cut(s) | 93 |
| PsuI | RGATCY | 1 cut(s) | 303 |
| RruI | TCGCGA | 1 cut(s) | 29 |
| RsaI | GTAC | 2 cut(s) | 95, 99 |
| RsaNI | GTAC | 2 cut(s) | 94, 98 |
| SaqAI | TTAA | 2 cut(s) | 204, 379 |
| Sau3AI | GATC | 2 cut(s) | 54, 303 |
| ScrFI | CCNGG | 1 cut(s) | 171 |
| SetI | ASST | 4 cut(s) | 87, 99, 277, 315 |
| SnaBI | TACGTA | 1 cut(s) | 97 |
| Sse9I | AATT | 3 cut(s) | 20, 210, 250 |
| SspMI | CTAG | 3 cut(s) | 69, 140, 357 |
| StyD4I | CCNGG | 1 cut(s) | 169 |
| TaaI | ACNGT | 1 cut(s) | 376 |
| TaiI | ACGT | 1 cut(s) | 99 |
| TasI | AATT | 3 cut(s) | 20, 210, 250 |
| TfiI | GAWTC | 1 cut(s) | 79 |
| Tru1I | TTAA | 2 cut(s) | 204, 379 |
| Tru9I | TTAA | 2 cut(s) | 204, 379 |
| XbaI | TCTAGA | 1 cut(s) | 139 |
| XspI | CTAG | 3 cut(s) | 69, 140, 357 |