Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0004686

Physical Location & Seq

Genomic Coordinates Reverse (-)

17874734 .. 17877658

Gene Structure 2925 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G44370.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1299 bp

ATGAAGTTATCAAATATTCCGCAACGCTATGTAATAGTCTTCTTAACTTTCCTCAGCACATGTGTGTGTTACATAGAGCGTGTTGGCTTCTCTATTGCATATACCGTTGCTGCTGATGCTGCTGGGATCAATCAATCGAGTAAAGGAACCATACTTTCTACATTCTTTGTTGGCTATGCATGTTCTCAAGTCCCTGGAGGTTGGGCAGCTCAGAAAATTGGGGGAAGGAAAGTTCTTCTTCTGTCGTTTGTTTTATGGTCATCGACGTGTTTCTTGGTTCCACTTGATCCAAACAGAGTCGGGCTTTTGGTTGTTGCCCGTTTACTTGTTGGTGTTGCTCAAGGTTTCATCTTTCCCTCTATCCACACAGTTTTGGCTCAGTGGGTTCCTCCTCATGAAAGGTCTAGATTGGTTTCGATAACGACATCAGGAATGTATTTAGGTGCAGCTTTAGGAATGTGGCTTCTCCCTGCTTTAGTTGAGCTTAGAGGTCCGGAATCAGTTTTCTTAGCAGAGGCATTAGCAGGTGTTATATGGTCATTGCTTTGGATTAGGTACGCTACTGACCCACCTCGATCTGAGCATCCAAAAGCTGCTGCTGCTGGATTCGGAGGTGCTCTGTTACCGACTAATGTAAACCACCATAAAGTTACTCATATCCCGTGGAAGAAAATCATGCTCAGTTTACCCGTTTGGGCGATTGTGGTTAACAATTTCACATTCCATTACGCTTTATATGTGTTGATGAACTGGCTTCCAACGTATTTCGAGCTTGGACTCCAGATCAGTCTTCAGGGGATGGATTCATCAAAGATGGTGCCATACCTCAACATGTTTGTATTCTCCATTGTTGGTGGGTTCATCGCAGACTATTTGATCACCAAGAGAATACTCTCGGTAACCAGAACCCGCAAGTTCTTGAACACAGTTGGGTTCCTAATTGCTTCAGCGGCATTGATGGTCTTACCCATGTTTAGAACAGAAAATGGTGTGATCTTATGTTCCTCAGTGGCTCTTGGGTTTTTGGCATTAGGAAGAGCCGGTTTTGCGGTGAACCATATGGATATTGCTCCAAGATATGCAGGAATAGTGATGGGAGTTTCAAATACTGCTGGGACATTAGCTGGAATCATTGGTGTTGATTTGACTGGAAAGCTTCTTGAAGCTTCTAAATTGGTTTACTCAGATTTGTCACATCCAGAGAGCTGGAGAGTTGTGTTCTTCATCCCGGGTTTGCTCTGTATCTTTAGCTCTGTTGTGTTTCTGCTGTTTTCTACTGGAGAAAGGATCTTTGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005315 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0006810 GO:0006811 GO:0006820 GO:0008150 GO:0009536 GO:0009605 GO:0009607 GO:0009624 GO:0012505 GO:0015291 GO:0015318 GO:0016020 GO:0016021 GO:0022804 GO:0022857 GO:0031224 GO:0034220 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044425 GO:0044444 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055085 GO:0098656

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MFS_1

Protein Analysis

432

Amino Acids

47.17

Weight (kDa)

9.44

Isoelectric Point (pI)

32.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MFS_1	PF07690	17 - 379	1.1e-50	Major Facilitator Superfamily
Sugar_tr	PF00083	44 - 156	8.1e-08	Sugar (and other) transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004686)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G44370
fragaria_vesca	FvH4_2g16800 FvH4_3g28940 FvH4_3g28940 FvH4_3g28940 FvH4_3g28940
malus_domestica	MD02G1271000.v1.1
prunus_persica	Prupe.1G563500_v2.0.a1 Prupe.8G180300_v2.0.a1
pyrus_communis	pycom02g23190 pycom07g02820
rosa_chinensis	RchiOBHm_Chr5g0051801 RchiOBHm_Chr6g0280921
rosa_laevigata	RLG00000013016 RLG00000034856
rosa_multiflora	Rmu_sc0027876.1_g000001 Rmu_sc0027877.1_g000001
rosa_roxburghii	Rroxscaffold_1G00027340 Rroxscaffold_7G00187490
rosa_rugosa	Rorug05G0276900 Rorug06G0136700
rosa_samantha	Rh5AG349000 Rh5BG360100 Rh5CG385100 Rh5DG374800 Rh6AG249200 Rh6BG251200 Rh6CG251900 Rh6DG243700
rosa_wichuraiana	Rw5G032920 Rw6G021560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	515
Acc36I	ACCTGC	1 cut(s)	515
AccB1I	GGYRCC	1 cut(s)	817
AccIII	TCCGGA	1 cut(s)	493
AciI	CCGC	4 cut(s)	20, 910, 950, 1049
AclWI	GGATC	3 cut(s)	134, 281, 1295
AcuI	CTGAAG	2 cut(s)	776, 930
AfaI	GTAC	1 cut(s)	557
AflIII	ACRYGT	3 cut(s)	59, 266, 831
AgsI	TTSAA	3 cut(s)	922, 1104, 1163
AjiI	CACGTC	1 cut(s)	267
AjnI	CCWGG	1 cut(s)	193
AleI	CACNNNNGTG	1 cut(s)	62
AloI	GAACNNNNNNTCC	2 cut(s)	216, 248
Alw21I	GWGCWC	1 cut(s)	619
AlwI	GGATC	3 cut(s)	134, 281, 1295
Ama87I	CYCGRG	1 cut(s)	1228
Aor13HI	TCCGGA	1 cut(s)	493
ApeKI	GCWGC	7 cut(s)	110, 119, 206, 446, 593, 596, 599
AspS9I	GGNCC	1 cut(s)	491
AsuC2I	CCSGG	2 cut(s)	1229, 1230
AsuHPI	GGTGA	2 cut(s)	871, 1063
AvaI	CYCGRG	1 cut(s)	1228
AvaII	GGWCC	1 cut(s)	491
BanI	GGYRCC	1 cut(s)	817
BbsI	GAAGAC	2 cut(s)	31, 782
Bbv12I	GWGCWC	1 cut(s)	619
BbvCI	CCTCAGC	1 cut(s)	53
BbvI	GCAGC	7 cut(s)	97, 106, 218, 458, 580, 583, 586
BccI	CCATC	4 cut(s)	793, 808, 952, 1087
BciT130I	CCWGG	1 cut(s)	195
BclI	TGATCA	1 cut(s)	876
BcnI	CCSGG	2 cut(s)	1229, 1230
BfaI	CTAG	1 cut(s)	405
BfuAI	ACCTGC	1 cut(s)	515
BisI	GCNGC	8 cut(s)	111, 120, 207, 447, 594, 597, 600, 951
BlsI	GCNGC	8 cut(s)	112, 121, 208, 448, 595, 598, 601, 952
Bme1390I	CCNGG	3 cut(s)	195, 1229, 1230
Bme18I	GGWCC	1 cut(s)	491
BmeT110I	CYCGRG	1 cut(s)	1228
BmgBI	CACGTC	1 cut(s)	267
BmgT120I	GGNCC	1 cut(s)	491
BmiI	GGNNCC	5 cut(s)	148, 279, 387, 819, 935
BmrFI	CCNGG	3 cut(s)	195, 1229, 1230
BmsI	GCATC	2 cut(s)	106, 592
BpiI	GAAGAC	2 cut(s)	31, 782
BpmI	CTGGAG	4 cut(s)	216, 764, 1228, 1299
Bpu10I	CCTNAGC	1 cut(s)	53
BpuEI	CTTGAG	2 cut(s)	171, 324
BpuMI	CCSGG	2 cut(s)	1229, 1230
BsaJI	CCNNGG	3 cut(s)	193, 662, 1228
BsaWI	WCCGGW	1 cut(s)	493
Bse118I	RCCGGY	1 cut(s)	1040
Bse1I	ACTGG	3 cut(s)	755, 1153, 1282
Bse3DI	GCAATG	1 cut(s)	539
BseAI	TCCGGA	1 cut(s)	493
BseBI	CCWGG	1 cut(s)	195
BseDI	CCNNGG	3 cut(s)	193, 662, 1228
BseGI	GGATG	4 cut(s)	583, 804, 1195, 1224
BseMI	GCAATG	1 cut(s)	539
BseMII	CTCAG	7 cut(s)	67, 224, 392, 570, 694, 1020, 1197
BseNI	ACTGG	3 cut(s)	755, 1153, 1282
BseRI	GAGGAG	1 cut(s)	381
BseXI	GCAGC	7 cut(s)	97, 106, 218, 458, 580, 583, 586
BseYI	CCCAGC	2 cut(s)	122, 1112
BsgI	GTGCAG	1 cut(s)	465
BshNI	GGYRCC	1 cut(s)	817
BsiHKAI	GWGCWC	1 cut(s)	619
BsiHKCI	CYCGRG	1 cut(s)	1228
BsiSI	CCGG	3 cut(s)	494, 1041, 1229
BslFI	GGGAC	2 cut(s)	176, 1129
BsmFI	GGGAC	2 cut(s)	176, 1129
BsoBI	CYCGRG	1 cut(s)	1228
Bsp1286I	GDGCHC	1 cut(s)	619
Bsp13I	TCCGGA	1 cut(s)	493
Bsp143I	GATC	7 cut(s)	126, 286, 575, 783, 876, 993, 1287
BspACI	CCGC	4 cut(s)	20, 910, 950, 1049
BspCNI	CTCAG	7 cut(s)	66, 223, 391, 571, 693, 1019, 1196
BspEI	TCCGGA	1 cut(s)	493
BspHI	TCATGA	1 cut(s)	394
BspLI	GGNNCC	5 cut(s)	148, 279, 387, 819, 935
BspMI	ACCTGC	1 cut(s)	515
BspPI	GGATC	3 cut(s)	134, 281, 1295
BspQI	GCTCTTC	1 cut(s)	1030
BspT107I	GGYRCC	1 cut(s)	817
BsrDI	GCAATG	1 cut(s)	539
BsrFI	RCCGGY	1 cut(s)	1040
BsrI	ACTGG	3 cut(s)	755, 1153, 1282
BssAI	RCCGGY	1 cut(s)	1040
BssECI	CCNNGG	3 cut(s)	193, 662, 1228
BssMI	GATC	7 cut(s)	126, 286, 575, 783, 876, 993, 1287
Bst2UI	CCWGG	1 cut(s)	195
Bst4CI	ACNGT	3 cut(s)	106, 370, 928
Bst6I	CTCTTC	1 cut(s)	1030
BstDEI	CTNAG	9 cut(s)	53, 210, 378, 485, 508, 579, 680, 1006, 1183
BstDSI	CCRYGG	1 cut(s)	662
BstEII	GGTNACC	1 cut(s)	898
BstF5I	GGATG	4 cut(s)	583, 804, 1195, 1224
BstKTI	GATC	7 cut(s)	129, 289, 578, 786, 879, 996, 1290
BstMBI	GATC	7 cut(s)	126, 286, 575, 783, 876, 993, 1287
BstMWI	GCNNNNNNNGC	5 cut(s)	116, 119, 599, 950, 1046
BstNI	CCWGG	1 cut(s)	195
BstNSI	RCATGY	3 cut(s)	63, 183, 835
BstPI	GGTNACC	1 cut(s)	898
BstSCI	CCNGG	3 cut(s)	193, 1227, 1228
BstV1I	GCAGC	7 cut(s)	97, 106, 218, 458, 580, 583, 586
BstV2I	GAAGAC	2 cut(s)	31, 782
BstX2I	RGATCY	1 cut(s)	1287
BstXI	CCANNNNNNTGG	1 cut(s)	1206
BstYI	RGATCY	1 cut(s)	1287
BtgI	CCRYGG	1 cut(s)	662
BtgZI	GCGATG	1 cut(s)	847
BtrI	CACGTC	1 cut(s)	267
BtsCI	GGATG	4 cut(s)	583, 804, 1195, 1224
BtsIMutI	CAGTG	2 cut(s)	386, 1014
BveI	ACCTGC	1 cut(s)	515
CciI	TCATGA	1 cut(s)	394
Cfr10I	RCCGGY	1 cut(s)	1040
Cfr13I	GGNCC	1 cut(s)	491
Cfr9I	CCCGGG	1 cut(s)	1228
Csp6I	GTAC	1 cut(s)	556
CviAII	CATG	6 cut(s)	60, 180, 395, 676, 832, 970
CviQI	GTAC	1 cut(s)	556
DdeI	CTNAG	9 cut(s)	53, 210, 378, 485, 508, 579, 680, 1006, 1183
DpnI	GATC	7 cut(s)	128, 288, 577, 785, 878, 995, 1289
DpnII	GATC	7 cut(s)	126, 286, 575, 783, 876, 993, 1287
Eam1104I	CTCTTC	1 cut(s)	1030
EarI	CTCTTC	1 cut(s)	1030
Eco47I	GGWCC	1 cut(s)	491
Eco57I	CTGAAG	2 cut(s)	776, 930
Eco88I	CYCGRG	1 cut(s)	1228
Eco91I	GGTNACC	1 cut(s)	898
EcoO65I	GGTNACC	1 cut(s)	898
EcoRII	CCWGG	1 cut(s)	193
EcoT22I	ATGCAT	1 cut(s)	181
FaeI	CATG	6 cut(s)	63, 183, 398, 679, 835, 973
FalI	AAGNNNNNCTT	2 cut(s)	222, 254
FaqI	GGGAC	2 cut(s)	176, 1129
FatI	CATG	6 cut(s)	59, 179, 394, 675, 831, 969
FauI	CCCGC	1 cut(s)	917
FauNDI	CATATG	1 cut(s)	1059
FbaI	TGATCA	1 cut(s)	876
Fnu4HI	GCNGC	8 cut(s)	111, 120, 207, 447, 594, 597, 600, 951
FokI	GGATG	4 cut(s)	570, 811, 1182, 1211
Fsp4HI	GCNGC	8 cut(s)	111, 120, 207, 447, 594, 597, 600, 951
FspBI	CTAG	1 cut(s)	405
GluI	GCNGC	8 cut(s)	111, 120, 207, 447, 594, 597, 600, 951
GsaI	CCCAGC	2 cut(s)	126, 1116
GsuI	CTGGAG	4 cut(s)	216, 764, 1228, 1299
HapII	CCGG	3 cut(s)	494, 1041, 1229
Hin1II	CATG	6 cut(s)	63, 183, 398, 679, 835, 973
HincII	GTYRAC	1 cut(s)	709
HindII	GTYRAC	1 cut(s)	709
HindIII	AAGCTT	2 cut(s)	1154, 1164
HinfI	GANTC	6 cut(s)	297, 497, 606, 777, 803, 1128
HpaI	GTTAAC	1 cut(s)	709
HpaII	CCGG	3 cut(s)	494, 1041, 1229
HphI	GGTGA	2 cut(s)	871, 1063
Hpy166II	GTNNAC	6 cut(s)	323, 637, 686, 709, 1054, 1180
Hpy188I	TCNGA	4 cut(s)	213, 580, 611, 1186
Hpy188III	TCNNGA	8 cut(s)	395, 405, 429, 494, 781, 919, 1160, 1199
Hpy8I	GTNNAC	6 cut(s)	323, 637, 686, 709, 1054, 1180
Hpy99I	CGWCG	1 cut(s)	268
HpyAV	CCTTC	1 cut(s)	219
HpyCH4III	ACNGT	3 cut(s)	106, 370, 928
HpyCH4IV	ACGT	2 cut(s)	266, 761
HpyCH4V	TGCA	4 cut(s)	98, 179, 446, 1082
HpyF10VI	GCNNNNNNNGC	5 cut(s)	116, 119, 599, 950, 1046
HpyF3I	CTNAG	9 cut(s)	53, 210, 378, 485, 508, 579, 680, 1006, 1183
HpySE526I	ACGT	2 cut(s)	266, 761
Hsp92II	CATG	6 cut(s)	63, 183, 398, 679, 835, 973
Kpn2I	TCCGGA	1 cut(s)	493
Ksp22I	TGATCA	1 cut(s)	876
KspAI	GTTAAC	1 cut(s)	709
Kzo9I	GATC	7 cut(s)	126, 286, 575, 783, 876, 993, 1287
LguI	GCTCTTC	1 cut(s)	1030
LmnI	GCTCC	1 cut(s)	1075
Lsp1109I	GCAGC	7 cut(s)	97, 106, 218, 458, 580, 583, 586
LweI	GCATC	2 cut(s)	106, 592
MaeI	CTAG	1 cut(s)	405
MaeII	ACGT	2 cut(s)	266, 761
MaeIII	GTNAC	5 cut(s)	68, 621, 649, 898, 1191
MalI	GATC	7 cut(s)	128, 288, 577, 785, 878, 995, 1289
MboI	GATC	7 cut(s)	126, 286, 575, 783, 876, 993, 1287
MboII	GAAGA	7 cut(s)	31, 227, 230, 679, 782, 1047, 1213
MflI	RGATCY	1 cut(s)	1287
MhlI	GDGCHC	1 cut(s)	619
MluCI	AATT	4 cut(s)	216, 712, 939, 1172
MlyI	GAGTC	2 cut(s)	306, 771
MmeI	TCCRAC	1 cut(s)	782
Mph1103I	ATGCAT	1 cut(s)	181
MroI	TCCGGA	1 cut(s)	493
MseI	TTAA	2 cut(s)	44, 708
MslI	CAYNNNNRTG	3 cut(s)	62, 64, 265
MspA1I	CMGCKG	1 cut(s)	950
MspI	CCGG	3 cut(s)	494, 1041, 1229
MspR9I	CCNGG	3 cut(s)	195, 1229, 1230
MvaI	CCWGG	1 cut(s)	195
MwoI	GCNNNNNNNGC	5 cut(s)	116, 119, 599, 950, 1046
NciI	CCSGG	2 cut(s)	1229, 1230
NdeI	CATATG	1 cut(s)	1059
NdeII	GATC	7 cut(s)	126, 286, 575, 783, 876, 993, 1287
NlaIII	CATG	6 cut(s)	63, 183, 398, 679, 835, 973
NlaIV	GGNNCC	5 cut(s)	148, 279, 387, 819, 935
NmuCI	GTSAC	1 cut(s)	1191
NsiI	ATGCAT	1 cut(s)	181
NspI	RCATGY	3 cut(s)	63, 183, 835
OliI	CACNNNNGTG	1 cut(s)	62
PagI	TCATGA	1 cut(s)	394
PaqCI	CACCTGC	1 cut(s)	515
PciI	ACATGT	2 cut(s)	59, 831
PciSI	GCTCTTC	1 cut(s)	1030
PfeI	GAWTC	4 cut(s)	497, 606, 803, 1128
PkrI	GCNGC	8 cut(s)	112, 121, 208, 448, 595, 598, 601, 952
PleI	GAGTC	2 cut(s)	305, 771
PpsI	GAGTC	2 cut(s)	305, 771
PscI	ACATGT	2 cut(s)	59, 831
Psp6I	CCWGG	1 cut(s)	193
PspEI	GGTNACC	1 cut(s)	898
PspFI	CCCAGC	2 cut(s)	122, 1112
PspGI	CCWGG	1 cut(s)	193
PspN4I	GGNNCC	5 cut(s)	148, 279, 387, 819, 935
PspPI	GGNCC	1 cut(s)	491
PsuI	RGATCY	1 cut(s)	1287
RsaI	GTAC	1 cut(s)	557
RsaNI	GTAC	1 cut(s)	556
RseI	CAYNNNNRTG	3 cut(s)	62, 64, 265
SapI	GCTCTTC	1 cut(s)	1030
SaqAI	TTAA	2 cut(s)	44, 708
SatI	GCNGC	8 cut(s)	111, 120, 207, 447, 594, 597, 600, 951
Sau3AI	GATC	7 cut(s)	126, 286, 575, 783, 876, 993, 1287
Sau96I	GGNCC	1 cut(s)	491
SchI	GAGTC	2 cut(s)	306, 771
ScrFI	CCNGG	3 cut(s)	195, 1229, 1230
SduI	GDGCHC	1 cut(s)	619
SfaNI	GCATC	2 cut(s)	106, 592
SinI	GGWCC	1 cut(s)	491
SmaI	CCCGGG	1 cut(s)	1230
SmiMI	CAYNNNNRTG	3 cut(s)	62, 64, 265
SmlI	CTYRAG	2 cut(s)	186, 339
SmoI	CTYRAG	2 cut(s)	186, 339
Sse9I	AATT	4 cut(s)	216, 712, 939, 1172
SsiI	CCGC	4 cut(s)	20, 910, 950, 1049
SspI	AATATT	1 cut(s)	16
SspMI	CTAG	1 cut(s)	405
StyD4I	CCNGG	3 cut(s)	193, 1227, 1228
TaaI	ACNGT	3 cut(s)	106, 370, 928
TaiI	ACGT	2 cut(s)	269, 764
TaqI	TCGA	5 cut(s)	137, 263, 416, 574, 768
TasI	AATT	4 cut(s)	216, 712, 939, 1172
TauI	GCSGC	1 cut(s)	953
TfiI	GAWTC	4 cut(s)	497, 606, 803, 1128
Tru1I	TTAA	2 cut(s)	44, 708
Tru9I	TTAA	2 cut(s)	44, 708
TscAI	CASTG	2 cut(s)	386, 1014
TseFI	GTSAC	1 cut(s)	1191
TseI	GCWGC	7 cut(s)	110, 119, 206, 446, 593, 596, 599
Tsp45I	GTSAC	1 cut(s)	1191
TspDTI	ATGAA	7 cut(s)	17, 337, 411, 761, 795, 850, 1213
TspMI	CCCGGG	1 cut(s)	1228
TspRI	CASTG	2 cut(s)	386, 1014
VpaK11BI	GGWCC	1 cut(s)	491
XbaI	TCTAGA	1 cut(s)	404
XceI	RCATGY	3 cut(s)	63, 183, 835
XmaI	CCCGGG	1 cut(s)	1228
XspI	CTAG	1 cut(s)	405
Zsp2I	ATGCAT	1 cut(s)	181

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.