Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0004686

Physical Location & Seq

Genomic Coordinates Forward (+)

18100155 .. 18101721

Gene Structure 1567 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G180300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1338 bp

ATGTGGACAAGATTTCCAAAGCGTTATTTGATTGTCGTTCTAACTTTCATCAGCACATTCATTTGCTATGTAGAAAGAGTGGGATTCTCAATTGCTTACACAGCAGCAGCTGATGTTGCTGGTGTGAGCCAATCAAGCAAAGGCACTATACTCTCTACATTCTATTATGGCTATGCCTGTTCACAAGTCCCTGGAGGATGGGCAGCTCAGAGAATAGGAGGAAGGTGTGTTCTTCTCCTCTCATTTGTGACATGGTCTCTAACTTATGCCTTTGTCCCGTTAGACCCCAATCGAGTCACAATGATGGTTCTGGCTCGGTTTCTTGTTGGTGTGGCACAAGGCTTCATGTTCCCTTCAATCCACTCTGTTCTTGCTCAATGGGTGCCTCCACATGAGAGGTCTAGATCTGTTTCTCTTACAACTTCTGGGATGTACCTTGGTGCAGCTGCAGGAATGCTTGTGGTTCCAAGCCTTGTGAAGTTGAGTAGCCCCCAATTTGTATTTTTGGCTGAAGCAACTTTAGGTACTATATGGTCTGTGGTTTGGTTAAACTATGCTAGCAACCCACCTCAATCTGAGCTTCCAAAAGCTACAACAGTTACGGGGTTTGGAGAAGTATTGTTGCTAATCAAAGGAGGTCATGAAAAGATCAAAGTGGAGGAACGGAACGAACGAAATTGTAATAGAACAGAAAGTATCCCATGGAAGATTATTTTTGGGAGCTTACCAATTTGGGCTATTGTAGTGAATAATTTCACTTTCCATTATGCTTTGTATGTGATGATGAATTGGCTCCCAACATACTTTGAACAAGGCCTCCAGCTTAGTCTTCAGGACATGGGGAGTTACAAGATGGTGCCTTATCTTAATATGTTCATATTCTCAAACATTGGTGGAGTGATTGCTGATCACTTGATCACAAAGAGGCTCTTGTCTGTGACTGCAACCAGGAAGCTTTTGAACACTTCAGGGTTCATAGTTGCTTCTCTTTCATTGATGGCACTGCCCATTTTCAGAACTTCCCTTGGGGCTGTGATTTGTTCTTCTATGGCCCTTGGTTTCTTGGCACTAGGGAGAGCTGGGTTTGCAGTAAATCACATGGATATTGCTCCCAAGTATGCAGGAATTGTGATGGGAGTGTCTAATACAGCTGGTACATTGGCTGGCATAATTGGGGTTGATCTCACTGGGAAGCTTCTTGAAGCTGCTAAGTTTTCTCATTCGGATCTTTCGAATCCGGACAGCTGGAGATCAGTGTTCATGATACCAGGGGTGCTTTGCATTTTCAGCTCACTTGGGTTTTTACTCTTCTCAACTGGGGAGAGGATTTTTCACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005315 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0006810 GO:0006811 GO:0006820 GO:0008150 GO:0009536 GO:0009605 GO:0009607 GO:0009624 GO:0012505 GO:0015291 GO:0015318 GO:0016020 GO:0016021 GO:0022804 GO:0022857 GO:0031224 GO:0034220 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044425 GO:0044444 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055085 GO:0098656

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MFS_1

Protein Analysis

446

Amino Acids

48.73

Weight (kDa)

9.39

Isoelectric Point (pI)

34.28

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004686)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G44370
fragaria_vesca	FvH4_2g16800 FvH4_3g28940 FvH4_3g28940 FvH4_3g28940 FvH4_3g28940
malus_domestica	MD02G1271000.v1.1
prunus_persica	Prupe.1G563500_v2.0.a1 Prupe.8G180300_v2.0.a1
pyrus_communis	pycom02g23190 pycom07g02820
rosa_chinensis	RchiOBHm_Chr5g0051801 RchiOBHm_Chr6g0280921
rosa_laevigata	RLG00000013016 RLG00000034856
rosa_multiflora	Rmu_sc0027876.1_g000001 Rmu_sc0027877.1_g000001
rosa_roxburghii	Rroxscaffold_1G00027340 Rroxscaffold_7G00187490
rosa_rugosa	Rorug05G0276900 Rorug06G0136700
rosa_samantha	Rh5AG349000 Rh5BG360100 Rh5CG385100 Rh5DG374800 Rh6AG249200 Rh6BG251200 Rh6CG251900 Rh6DG243700
rosa_wichuraiana	Rw5G032920 Rw6G021560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	382, 856
AccIII	TCCGGA	1 cut(s)	1237
AclWI	GGATC	1 cut(s)	1233
AcuI	CTGAAG	3 cut(s)	531, 815, 951
AfaI	GTAC	3 cut(s)	434, 526, 1156
AgsI	TTSAA	4 cut(s)	357, 809, 961, 1202
AjnI	CCWGG	3 cut(s)	190, 947, 1267
AloI	GAACNNNNNNTCC	4 cut(s)	213, 245, 801, 833
Alw26I	GTCTC	1 cut(s)	261
AlwI	GGATC	1 cut(s)	1233
AlwNI	CAGNNNCTG	1 cut(s)	110
Aor13HI	TCCGGA	1 cut(s)	1237
AoxI	GGCC	2 cut(s)	814, 1050
ApeKI	GCWGC	6 cut(s)	104, 107, 203, 443, 446, 1205
Asp700I	GAANNNNTTC	1 cut(s)	752
AspS9I	GGNCC	1 cut(s)	1051
AsuII	TTCGAA	1 cut(s)	1232
AsuNHI	GCTAGC	1 cut(s)	557
BanI	GGYRCC	2 cut(s)	382, 856
BbsI	GAAGAC	1 cut(s)	821
BbvI	GCAGC	6 cut(s)	116, 119, 215, 433, 455, 1192
BccI	CCATC	5 cut(s)	192, 298, 847, 991, 1126
BciT130I	CCWGG	3 cut(s)	192, 949, 1269
BciVI	GTATCC	1 cut(s)	707
BclI	TGATCA	2 cut(s)	907, 915
BcoDI	GTCTC	1 cut(s)	261
BfaI	CTAG	3 cut(s)	402, 558, 1070
BfmI	CTRYAG	1 cut(s)	447
BfuI	GTATCC	1 cut(s)	707
BglII	AGATCT	1 cut(s)	404
BisI	GCNGC	6 cut(s)	105, 108, 204, 444, 447, 1206
BlsI	GCNGC	6 cut(s)	106, 109, 205, 445, 448, 1207
Bme1390I	CCNGG	3 cut(s)	192, 949, 1269
BmgT120I	GGNCC	1 cut(s)	1051
BmiI	GGNNCC	4 cut(s)	384, 465, 794, 858
BmrFI	CCNGG	3 cut(s)	192, 949, 1269
BmrI	ACTGGG	2 cut(s)	1197, 1326
BmtI	GCTAGC	1 cut(s)	561
BmuI	ACTGGG	2 cut(s)	1197, 1326
BpiI	GAAGAC	1 cut(s)	821
BpmI	CTGGAG	3 cut(s)	213, 803, 1267
Bpu14I	TTCGAA	1 cut(s)	1232
BsaI	GGTCTC	1 cut(s)	261
BsaJI	CCNNGG	6 cut(s)	190, 436, 701, 1024, 1054, 1268
BsaWI	WCCGGW	1 cut(s)	1237
BsaXI	ACNNNNNCTCC	2 cut(s)	801, 831
Bse1I	ACTGG	2 cut(s)	1192, 1321
BseAI	TCCGGA	1 cut(s)	1237
BseBI	CCWGG	3 cut(s)	192, 949, 1269
BseDI	CCNNGG	6 cut(s)	190, 436, 701, 1024, 1054, 1268
BseGI	GGATG	2 cut(s)	203, 435
BseMII	CTCAG	2 cut(s)	221, 567
BseNI	ACTGG	2 cut(s)	1192, 1321
BseRI	GAGGAG	1 cut(s)	227
BseXI	GCAGC	6 cut(s)	116, 119, 215, 433, 455, 1192
BseYI	CCCAGC	1 cut(s)	1079
BsgI	GTGCAG	1 cut(s)	462
BshFI	GGCC	2 cut(s)	816, 1052
BshNI	GGYRCC	2 cut(s)	382, 856
BsiSI	CCGG	1 cut(s)	1238
BslFI	GGGAC	2 cut(s)	173, 260
BsmAI	GTCTC	1 cut(s)	261
BsmFI	GGGAC	2 cut(s)	173, 260
BsmI	GAATGC	1 cut(s)	459
BsnI	GGCC	2 cut(s)	816, 1052
Bso31I	GGTCTC	1 cut(s)	261
Bsp119I	TTCGAA	1 cut(s)	1232
Bsp13I	TCCGGA	1 cut(s)	1237
Bsp143I	GATC	7 cut(s)	404, 648, 907, 915, 1180, 1225, 1250
Bsp19I	CCATGG	1 cut(s)	701
BspANI	GGCC	2 cut(s)	816, 1052
BspCNI	CTCAG	2 cut(s)	220, 568
BspEI	TCCGGA	1 cut(s)	1237
BspHI	TCATGA	2 cut(s)	640, 1260
BspLI	GGNNCC	4 cut(s)	384, 465, 794, 858
BspMAI	CTGCAG	1 cut(s)	451
BspOI	GCTAGC	1 cut(s)	561
BspPI	GGATC	1 cut(s)	1233
BspT104I	TTCGAA	1 cut(s)	1232
BspT107I	GGYRCC	2 cut(s)	382, 856
BspTNI	GGTCTC	1 cut(s)	261
BsrI	ACTGG	2 cut(s)	1192, 1321
BssECI	CCNNGG	6 cut(s)	190, 436, 701, 1024, 1054, 1268
BssMI	GATC	7 cut(s)	404, 648, 907, 915, 1180, 1225, 1250
BssT1I	CCWWGG	4 cut(s)	436, 701, 1024, 1054
Bst2UI	CCWGG	3 cut(s)	192, 949, 1269
Bst4CI	ACNGT	1 cut(s)	598
Bst6I	CTCTTC	1 cut(s)	1313
BstBI	TTCGAA	1 cut(s)	1232
BstC8I	GCNNGC	2 cut(s)	559, 1165
BstDEI	CTNAG	4 cut(s)	207, 576, 824, 1209
BstDSI	CCRYGG	1 cut(s)	701
BstF5I	GGATG	2 cut(s)	203, 435
BstKTI	GATC	7 cut(s)	407, 651, 910, 918, 1183, 1228, 1253
BstMAI	GTCTC	1 cut(s)	261
BstMBI	GATC	7 cut(s)	404, 648, 907, 915, 1180, 1225, 1250
BstMWI	GCNNNNNNNGC	5 cut(s)	101, 116, 135, 1085, 1287
BstNI	CCWGG	3 cut(s)	192, 949, 1269
BstSCI	CCNGG	3 cut(s)	190, 947, 1267
BstSFI	CTRYAG	1 cut(s)	447
BstV1I	GCAGC	6 cut(s)	116, 119, 215, 433, 455, 1192
BstV2I	GAAGAC	1 cut(s)	821
BstX2I	RGATCY	2 cut(s)	404, 1225
BstYI	RGATCY	2 cut(s)	404, 1225
BsuI	GTATCC	1 cut(s)	707
BsuRI	GGCC	2 cut(s)	816, 1052
BtgI	CCRYGG	1 cut(s)	701
BtsCI	GGATG	2 cut(s)	203, 435
BtsI	GCAGTG	1 cut(s)	1001
BtsIMutI	CAGTG	4 cut(s)	1001, 1185, 1260, 1333
Cac8I	GCNNGC	2 cut(s)	559, 1165
CaiI	CAGNNNCTG	1 cut(s)	110
CciI	TCATGA	2 cut(s)	640, 1260
Cfr13I	GGNCC	1 cut(s)	1051
Csp6I	GTAC	3 cut(s)	433, 525, 1155
CviAII	CATG	8 cut(s)	252, 346, 392, 641, 702, 838, 1099, 1261
CviQI	GTAC	3 cut(s)	433, 525, 1155
DdeI	CTNAG	4 cut(s)	207, 576, 824, 1209
DpnI	GATC	7 cut(s)	406, 650, 909, 917, 1182, 1227, 1252
DpnII	GATC	7 cut(s)	404, 648, 907, 915, 1180, 1225, 1250
Eam1104I	CTCTTC	1 cut(s)	1313
EarI	CTCTTC	1 cut(s)	1313
Eco130I	CCWWGG	4 cut(s)	436, 701, 1024, 1054
Eco147I	AGGCCT	1 cut(s)	816
Eco31I	GGTCTC	1 cut(s)	261
Eco57I	CTGAAG	3 cut(s)	531, 815, 951
EcoRII	CCWGG	3 cut(s)	190, 947, 1267
EcoT14I	CCWWGG	4 cut(s)	436, 701, 1024, 1054
ErhI	CCWWGG	4 cut(s)	436, 701, 1024, 1054
FaeI	CATG	8 cut(s)	255, 349, 395, 644, 705, 841, 1102, 1264
FalI	AAGNNNNNCTT	2 cut(s)	914, 946
FaqI	GGGAC	2 cut(s)	173, 260
FatI	CATG	8 cut(s)	251, 345, 391, 640, 701, 837, 1098, 1260
FbaI	TGATCA	2 cut(s)	907, 915
Fnu4HI	GCNGC	6 cut(s)	105, 108, 204, 444, 447, 1206
FokI	GGATG	2 cut(s)	210, 442
Fsp4HI	GCNGC	6 cut(s)	105, 108, 204, 444, 447, 1206
FspBI	CTAG	3 cut(s)	402, 558, 1070
GluI	GCNGC	6 cut(s)	105, 108, 204, 444, 447, 1206
GsaI	CCCAGC	1 cut(s)	1083
GsuI	CTGGAG	3 cut(s)	213, 803, 1267
HaeIII	GGCC	2 cut(s)	816, 1052
HapII	CCGG	1 cut(s)	1238
Hin1II	CATG	8 cut(s)	255, 349, 395, 644, 705, 841, 1102, 1264
HindIII	AAGCTT	2 cut(s)	953, 1193
HinfI	GANTC	3 cut(s)	84, 294, 1234
HpaII	CCGG	1 cut(s)	1238
Hpy166II	GTNNAC	2 cut(s)	6, 182
Hpy188I	TCNGA	4 cut(s)	210, 577, 1016, 1225
Hpy188III	TCNNGA	6 cut(s)	402, 641, 833, 1199, 1238, 1261
Hpy8I	GTNNAC	2 cut(s)	6, 182
HpyAV	CCTTC	2 cut(s)	216, 363
HpyCH4III	ACNGT	1 cut(s)	598
HpyCH4V	TGCA	6 cut(s)	443, 449, 944, 1088, 1121, 1281
HpyF10VI	GCNNNNNNNGC	5 cut(s)	101, 116, 135, 1085, 1287
HpyF3I	CTNAG	4 cut(s)	207, 576, 824, 1209
Hsp92II	CATG	8 cut(s)	255, 349, 395, 644, 705, 841, 1102, 1264
Kpn2I	TCCGGA	1 cut(s)	1237
Ksp22I	TGATCA	2 cut(s)	907, 915
Kzo9I	GATC	7 cut(s)	404, 648, 907, 915, 1180, 1225, 1250
LmnI	GCTCC	3 cut(s)	720, 798, 1114
Lsp1109I	GCAGC	6 cut(s)	116, 119, 215, 433, 455, 1192
MaeI	CTAG	3 cut(s)	402, 558, 1070
MaeIII	GTNAC	5 cut(s)	247, 295, 598, 845, 937
MalI	GATC	7 cut(s)	406, 650, 909, 917, 1182, 1227, 1252
MboI	GATC	7 cut(s)	404, 648, 907, 915, 1180, 1225, 1250
MboII	GAAGA	5 cut(s)	224, 718, 821, 1035, 1300
MfeI	CAATTG	1 cut(s)	90
MflI	RGATCY	2 cut(s)	404, 1225
MluCI	AATT	8 cut(s)	90, 494, 676, 729, 751, 787, 1125, 1170
MlyI	GAGTC	1 cut(s)	303
MroI	TCCGGA	1 cut(s)	1237
MroXI	GAANNNNTTC	1 cut(s)	752
MseI	TTAA	2 cut(s)	548, 867
MslI	CAYNNNNRTG	1 cut(s)	302
MspA1I	CMGCKG	4 cut(s)	110, 446, 1151, 1245
MspI	CCGG	1 cut(s)	1238
MspR9I	CCNGG	3 cut(s)	192, 949, 1269
MunI	CAATTG	1 cut(s)	90
Mva1269I	GAATGC	1 cut(s)	459
MvaI	CCWGG	3 cut(s)	192, 949, 1269
MwoI	GCNNNNNNNGC	5 cut(s)	101, 116, 135, 1085, 1287
NcoI	CCATGG	1 cut(s)	701
NdeII	GATC	7 cut(s)	404, 648, 907, 915, 1180, 1225, 1250
NheI	GCTAGC	1 cut(s)	557
NlaIII	CATG	8 cut(s)	255, 349, 395, 644, 705, 841, 1102, 1264
NlaIV	GGNNCC	4 cut(s)	384, 465, 794, 858
NmuCI	GTSAC	3 cut(s)	247, 295, 937
NspV	TTCGAA	1 cut(s)	1232
PagI	TCATGA	2 cut(s)	640, 1260
PceI	AGGCCT	1 cut(s)	816
PcsI	WCGNNNNNNNCGW	2 cut(s)	670, 1229
PctI	GAATGC	1 cut(s)	459
PdmI	GAANNNNTTC	1 cut(s)	752
PfeI	GAWTC	2 cut(s)	84, 1234
PflFI	GACNNNGTC	1 cut(s)	253
PkrI	GCNGC	6 cut(s)	106, 109, 205, 445, 448, 1207
PleI	GAGTC	1 cut(s)	302
PpsI	GAGTC	1 cut(s)	302
Psp6I	CCWGG	3 cut(s)	190, 947, 1267
PspFI	CCCAGC	1 cut(s)	1079
PspGI	CCWGG	3 cut(s)	190, 947, 1267
PspN4I	GGNNCC	4 cut(s)	384, 465, 794, 858
PspPI	GGNCC	1 cut(s)	1051
PstI	CTGCAG	1 cut(s)	451
PstNI	CAGNNNCTG	1 cut(s)	110
PsuI	RGATCY	2 cut(s)	404, 1225
PsyI	GACNNNGTC	1 cut(s)	253
PvuII	CAGCTG	4 cut(s)	110, 446, 1151, 1245
RsaI	GTAC	3 cut(s)	434, 526, 1156
RsaNI	GTAC	3 cut(s)	433, 525, 1155
RseI	CAYNNNNRTG	1 cut(s)	302
SaqAI	TTAA	2 cut(s)	548, 867
SatI	GCNGC	6 cut(s)	105, 108, 204, 444, 447, 1206
Sau3AI	GATC	7 cut(s)	404, 648, 907, 915, 1180, 1225, 1250
Sau96I	GGNCC	1 cut(s)	1051
SchI	GAGTC	1 cut(s)	303
ScrFI	CCNGG	3 cut(s)	192, 949, 1269
SfcI	CTRYAG	1 cut(s)	447
SfuI	TTCGAA	1 cut(s)	1232
SmiMI	CAYNNNNRTG	1 cut(s)	302
Sse9I	AATT	8 cut(s)	90, 494, 676, 729, 751, 787, 1125, 1170
SseBI	AGGCCT	1 cut(s)	816
SspMI	CTAG	3 cut(s)	402, 558, 1070
StuI	AGGCCT	1 cut(s)	816
StyD4I	CCNGG	3 cut(s)	190, 947, 1267
StyI	CCWWGG	4 cut(s)	436, 701, 1024, 1054
TaaI	ACNGT	1 cut(s)	598
TaqI	TCGA	2 cut(s)	292, 1232
TasI	AATT	8 cut(s)	90, 494, 676, 729, 751, 787, 1125, 1170
TfiI	GAWTC	2 cut(s)	84, 1234
Tru1I	TTAA	2 cut(s)	548, 867
Tru9I	TTAA	2 cut(s)	548, 867
TscAI	CASTG	3 cut(s)	1008, 1192, 1260
TseFI	GTSAC	3 cut(s)	247, 295, 937
TseI	GCWGC	6 cut(s)	104, 107, 203, 443, 446, 1205
Tsp45I	GTSAC	3 cut(s)	247, 295, 937
TspDTI	ATGAA	9 cut(s)	37, 49, 334, 657, 800, 865, 964, 981, 1249
TspGWI	ACGGA	1 cut(s)	679
TspRI	CASTG	3 cut(s)	1008, 1192, 1260
Tth111I	GACNNNGTC	1 cut(s)	253
XbaI	TCTAGA	1 cut(s)	401
XmnI	GAANNNNTTC	1 cut(s)	752
XspI	CTAG	3 cut(s)	402, 558, 1070

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.