Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003570

Physical Location & Seq

Genomic Coordinates Forward (+)

21069110 .. 21071739

Gene Structure 2630 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G51830.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1032 bp

ATGGGTGAGGATGCAATCTCAGGTAATCTCAAGAATCTAACGATCGACACAAGAGATTCAGAAACTCTTGTGGTATGTTTCGGTGAAATGTTGATTGATTTTGTTCCTACGGTGGGAGGTGTTTCATTGGCTGAAGCACCAGCTTTCAAGAAAGCTCCTGGAGGAGCTCCTGCTAATGTAGCTGTTGGTGTCTCTAGACTTGGTGGCTCCTCTGCTTTCATTGGAAAGGTTGGTGATGATGAGTTTGGAAGAATGTTAGCTGATATTCTAAGGCTGAACAATGTTGACAACTCTGGGATGAGATTCGACCATAATGCACGGACTGCTTTGGCCTTTGTTACGCTAAGAGGTGATGGAGAGAGGGAGTTTTTGTTCTTCAGGCATCCGAGTGCTGATATGCTTCTTTTGGAATCTGAGCTTGACAAGAACCTCATCCAAAAGGCCAAGATCTTTCACTACGGATCTATCAGTTTGATTGAGGAACCTTGCCGTTCTACTCAGCTTGTAGCTATGAAAATCGCTAAGGCTGCAGGGAGTCTTTTATCTTATGACCCGAATTTGAGATTGCCGTTGTGGCCATCAGAAGAAGCTGCTAGGAAAGAGATAATGAGTATCTGGAATTTAGCTGATGTTATAAAGATTAGCGAAGACGAGATAACATTCCTGACCGGTGGTGATGATCCTTATGATGATGATGTGGTGTTGCAAAAGCTCTTTCATCCCAATCTTAAGCTTCTTGTTGTTTCAGAAGGACCTAATGGCTGTAGATACTACACTCAGGAGTTTAAAGGTAGAGTTGGTGGAGTAAAAGTGAAGCCAGTTGATACAACCGGTGCAGGAGATGCATTCGTGAGCGGGTTATTGAACAGCTTAGCTTCTGATCTTACTCTTCTCAAGGATGAGAAGAAACTAAGAGAGGCGCTTCTATTTGCAAACGCATGTGGAGCCATTACAGTAACAGAGAGAGGAGCGATACCGGCGATGCCAAGCATGGATGCTGTTCAAGATCTTCTTTCTTCTACTCGCTCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004396 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005975 GO:0005996 GO:0006000 GO:0006082 GO:0006629 GO:0006631 GO:0006633 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0008610 GO:0008865 GO:0009058 GO:0009987 GO:0010035 GO:0010038 GO:0016051 GO:0016053 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019200 GO:0019318 GO:0019752 GO:0032787 GO:0042221 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044262 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0046686 GO:0046835 GO:0050896 GO:0071704 GO:0072330 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00051 ko00500 ko00520 ko01100 map00051 map00500 map00520 map01100

Pfam Domains

Protein Families

PfkB

Protein Analysis

343

Amino Acids

37.03

Weight (kDa)

4.99

Isoelectric Point (pI)

33.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PfkB	PF00294	22 - 330	7.5e-75	pfkB family carbohydrate kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003570)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G51830 AT5G51830
fragaria_vesca	FvH4_7g12690 FvH4_7g28710 FvH4_7g28710
malus_domestica	MD00G1004100.v1.1 MD01G1193000.v1.1 MD02G1197500.v1.1 MD15G1307900.v1.1
prunus_persica	Prupe.2G151100_v2.0.a1 Prupe.2G287100_v2.0.a1 Prupe.2G287100_v2.0.a1 Prupe.2G287100_v2.0.a1
pyrus_communis	pycom01g20360 pycom02g16100 pycom07g23930
rosa_chinensis	RchiOBHm_Chr1g0351681 RchiOBHm_Chr1g0376211
rosa_laevigata	RLG00000026619 RLG00000028390
rosa_multiflora	Rmu_sc0000061.1_g000037 Rmu_sc0001144.1_g000004
rosa_roxburghii	Rroxscaffold_4G00282300 Rroxscaffold_4G00303620
rosa_rugosa	Rorug01G0220600 Rorug01G0394400
rosa_samantha	Rh1AG406000 Rh1BG369700 Rh1CG382400 Rh1CG382600 Rh1DG232200 Rh1DG399300 Rh1DG399500
rosa_wichuraiana	Rw1G020430 Rw1G036020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	635
AccBSI	CCGCTC	1 cut(s)	855
AciI	CCGC	1 cut(s)	855
AclWI	GGATC	2 cut(s)	469, 674
AcoI	YGGCCR	1 cut(s)	575
AcsI	RAATTY	2 cut(s)	556, 619
AcuI	CTGAAG	2 cut(s)	153, 361
AfiI	CCNNNNNNNGG	1 cut(s)	113
AflII	CTTAAG	1 cut(s)	728
AgeI	ACCGGT	2 cut(s)	668, 830
AgsI	TTSAA	3 cut(s)	148, 865, 1004
AjnI	CCWGG	1 cut(s)	157
AloI	GAACNNNNNNTCC	2 cut(s)	356, 388
Alw21I	GWGCWC	1 cut(s)	169
Alw26I	GTCTC	1 cut(s)	196
AlwI	GGATC	2 cut(s)	469, 674
AoxI	GGCC	3 cut(s)	330, 441, 575
ApeKI	GCWGC	2 cut(s)	527, 590
ApoI	RAATTY	2 cut(s)	556, 619
AsiGI	ACCGGT	2 cut(s)	668, 830
AspLEI	GCGC	1 cut(s)	922
AspS9I	GGNCC	1 cut(s)	752
AsuHPI	GGTGA	5 cut(s)	17, 95, 245, 362, 686
AvaII	GGWCC	1 cut(s)	752
BalI	TGGCCA	1 cut(s)	577
BanII	GRGCYC	1 cut(s)	169
BbsI	GAAGAC	1 cut(s)	654
Bbv12I	GWGCWC	1 cut(s)	169
BbvI	GCAGC	2 cut(s)	514, 577
BccI	CCATC	2 cut(s)	347, 586
BceAI	ACGGC	2 cut(s)	474, 553
BcgI	CGANNNNNNTGC	2 cut(s)	296, 330
BciT130I	CCWGG	1 cut(s)	159
BcoDI	GTCTC	1 cut(s)	196
BfaI	CTAG	2 cut(s)	195, 594
BfmI	CTRYAG	2 cut(s)	528, 763
BfoI	RGCGCY	1 cut(s)	923
BfrI	CTTAAG	1 cut(s)	728
BglI	GCCNNNNNGGC	1 cut(s)	574
BglII	AGATCT	2 cut(s)	447, 1006
BisI	GCNGC	2 cut(s)	528, 591
BlpI	GCTNAGC	1 cut(s)	871
BlsI	GCNGC	2 cut(s)	529, 592
Bme1390I	CCNGG	1 cut(s)	159
Bme18I	GGWCC	1 cut(s)	752
BmgT120I	GGNCC	1 cut(s)	752
BmiI	GGNNCC	3 cut(s)	208, 483, 946
BmrFI	CCNGG	1 cut(s)	159
BmsI	GCATC	4 cut(s)	391, 832, 972, 985
BpiI	GAAGAC	1 cut(s)	654
BpmI	CTGGAG	1 cut(s)	180
Bpu10I	CCTNAGC	1 cut(s)	522
Bpu1102I	GCTNAGC	1 cut(s)	871
BpuEI	CTTGAG	2 cut(s)	14, 878
BsaWI	WCCGGW	2 cut(s)	668, 830
BsaXI	ACNNNNNCTCC	4 cut(s)	356, 386, 795, 825
Bsc4I	CCNNNNNNNGG	1 cut(s)	113
Bse118I	RCCGGY	3 cut(s)	668, 830, 976
Bse1I	ACTGG	1 cut(s)	818
BseBI	CCWGG	1 cut(s)	159
BseGI	GGATG	7 cut(s)	16, 303, 382, 432, 718, 904, 1000
BseLI	CCNNNNNNNGG	1 cut(s)	113
BseMII	CTCAG	4 cut(s)	33, 405, 512, 791
BseNI	ACTGG	1 cut(s)	818
BseRI	GAGGAG	3 cut(s)	177, 199, 981
BseXI	GCAGC	2 cut(s)	514, 577
BsgI	GTGCAG	1 cut(s)	855
Bsh1285I	CGRYCG	1 cut(s)	45
BshFI	GGCC	3 cut(s)	332, 443, 577
BshTI	ACCGGT	2 cut(s)	668, 830
BsiEI	CGRYCG	1 cut(s)	45
BsiHKAI	GWGCWC	1 cut(s)	169
BsiSI	CCGG	3 cut(s)	669, 831, 977
BslI	CCNNNNNNNGG	1 cut(s)	113
BsmAI	GTCTC	1 cut(s)	196
BsmI	GAATGC	1 cut(s)	845
BsnI	GGCC	3 cut(s)	332, 443, 577
Bsp1286I	GDGCHC	1 cut(s)	169
Bsp143I	GATC	6 cut(s)	42, 447, 461, 679, 880, 1006
Bsp1720I	GCTNAGC	1 cut(s)	871
BspACI	CCGC	1 cut(s)	855
BspANI	GGCC	3 cut(s)	332, 443, 577
BspCNI	CTCAG	4 cut(s)	32, 406, 511, 790
BspLI	GGNNCC	3 cut(s)	208, 483, 946
BspMAI	CTGCAG	1 cut(s)	532
BspPI	GGATC	2 cut(s)	469, 674
BspTI	CTTAAG	1 cut(s)	728
BsrBI	CCGCTC	1 cut(s)	855
BsrFI	RCCGGY	3 cut(s)	668, 830, 976
BsrI	ACTGG	1 cut(s)	818
BssAI	RCCGGY	3 cut(s)	668, 830, 976
BssMI	GATC	6 cut(s)	42, 447, 461, 679, 880, 1006
Bst2UI	CCWGG	1 cut(s)	159
Bst4CI	ACNGT	2 cut(s)	112, 955
Bst6I	CTCTTC	1 cut(s)	894
BstAFI	CTTAAG	1 cut(s)	728
BstAPI	GCANNNNNTGC	2 cut(s)	323, 842
BstDEI	CTNAG	9 cut(s)	19, 269, 344, 414, 498, 522, 777, 871, 911
BstF5I	GGATG	7 cut(s)	16, 303, 382, 432, 718, 904, 1000
BstH2I	RGCGCY	1 cut(s)	923
BstHHI	GCGC	1 cut(s)	922
BstKTI	GATC	6 cut(s)	45, 450, 464, 682, 883, 1009
BstMAI	GTCTC	1 cut(s)	196
BstMBI	GATC	6 cut(s)	42, 447, 461, 679, 880, 1006
BstMCI	CGRYCG	1 cut(s)	45
BstMWI	GCNNNNNNNGC	7 cut(s)	179, 323, 527, 574, 842, 944, 977
BstNI	CCWGG	1 cut(s)	159
BstNSI	RCATGY	1 cut(s)	942
BstSCI	CCNGG	1 cut(s)	157
BstSFI	CTRYAG	2 cut(s)	528, 763
BstV1I	GCAGC	2 cut(s)	514, 577
BstV2I	GAAGAC	1 cut(s)	654
BstX2I	RGATCY	3 cut(s)	447, 461, 1006
BstYI	RGATCY	3 cut(s)	447, 461, 1006
BsuRI	GGCC	3 cut(s)	332, 443, 577
BtgZI	GCGATG	1 cut(s)	995
BtsCI	GGATG	7 cut(s)	16, 303, 382, 432, 718, 904, 1000
CfoI	GCGC	1 cut(s)	922
Cfr10I	RCCGGY	3 cut(s)	668, 830, 976
Cfr13I	GGNCC	1 cut(s)	752
CspAI	ACCGGT	2 cut(s)	668, 830
CviAII	CATG	2 cut(s)	939, 991
DdeI	CTNAG	9 cut(s)	19, 269, 344, 414, 498, 522, 777, 871, 911
DpnI	GATC	6 cut(s)	44, 449, 463, 681, 882, 1008
DpnII	GATC	6 cut(s)	42, 447, 461, 679, 880, 1006
DraI	TTTAAA	1 cut(s)	787
EaeI	YGGCCR	1 cut(s)	575
Eam1104I	CTCTTC	1 cut(s)	894
EarI	CTCTTC	1 cut(s)	894
Ecl136II	GAGCTC	1 cut(s)	167
Eco24I	GRGCYC	1 cut(s)	169
Eco47I	GGWCC	1 cut(s)	752
Eco53kI	GAGCTC	1 cut(s)	167
Eco57I	CTGAAG	2 cut(s)	153, 361
EcoICRI	GAGCTC	1 cut(s)	167
EcoO109I	RGGNCCY	1 cut(s)	752
EcoRII	CCWGG	1 cut(s)	157
EcoT22I	ATGCAT	1 cut(s)	847
EcoT38I	GRGCYC	1 cut(s)	169
FaeI	CATG	2 cut(s)	942, 994
FaiI	YATR	9 cut(s)	76, 312, 398, 512, 549, 635, 687, 940, 992
FalI	AAGNNNNNCTT	2 cut(s)	996, 1028
FatI	CATG	2 cut(s)	938, 990
FauI	CCCGC	1 cut(s)	848
Fnu4HI	GCNGC	2 cut(s)	528, 591
FokI	GGATG	7 cut(s)	23, 310, 369, 419, 705, 911, 1007
FriOI	GRGCYC	1 cut(s)	169
Fsp4HI	GCNGC	2 cut(s)	528, 591
FspBI	CTAG	2 cut(s)	195, 594
GlaI	GCGC	1 cut(s)	921
GluI	GCNGC	2 cut(s)	528, 591
GsuI	CTGGAG	1 cut(s)	180
HaeII	RGCGCY	1 cut(s)	923
HaeIII	GGCC	3 cut(s)	332, 443, 577
HapII	CCGG	3 cut(s)	669, 831, 977
HhaI	GCGC	1 cut(s)	922
Hin1II	CATG	2 cut(s)	942, 994
Hin6I	GCGC	1 cut(s)	920
HinP1I	GCGC	1 cut(s)	920
HincII	GTYRAC	1 cut(s)	286
HindII	GTYRAC	1 cut(s)	286
HindIII	AAGCTT	1 cut(s)	731
HinfI	GANTC	5 cut(s)	34, 56, 303, 410, 535
HpaII	CCGG	3 cut(s)	669, 831, 977
HphI	GGTGA	5 cut(s)	17, 95, 245, 362, 686
Hpy166II	GTNNAC	1 cut(s)	286
Hpy188I	TCNGA	6 cut(s)	61, 387, 415, 583, 748, 880
Hpy188III	TCNNGA	8 cut(s)	31, 148, 195, 616, 664, 779, 850, 1004
Hpy8I	GTNNAC	1 cut(s)	286
HpyAV	CCTTC	1 cut(s)	743
HpyCH4III	ACNGT	2 cut(s)	112, 955
HpyCH4V	TGCA	7 cut(s)	14, 317, 530, 706, 836, 845, 932
HpyF10VI	GCNNNNNNNGC	7 cut(s)	179, 323, 527, 574, 842, 944, 977
HpyF3I	CTNAG	9 cut(s)	19, 269, 344, 414, 498, 522, 777, 871, 911
Hsp92II	CATG	2 cut(s)	942, 994
HspAI	GCGC	1 cut(s)	920
Kzo9I	GATC	6 cut(s)	42, 447, 461, 679, 880, 1006
LmnI	GCTCC	7 cut(s)	160, 164, 172, 212, 944, 968, 1031
Lsp1109I	GCAGC	2 cut(s)	514, 577
LweI	GCATC	4 cut(s)	391, 832, 972, 985
MaeI	CTAG	2 cut(s)	195, 594
MaeIII	GTNAC	2 cut(s)	337, 955
MalI	GATC	6 cut(s)	44, 449, 463, 681, 882, 1008
MbiI	CCGCTC	1 cut(s)	855
MboI	GATC	6 cut(s)	42, 447, 461, 679, 880, 1006
MboII	GAAGA	8 cut(s)	261, 367, 596, 659, 881, 916, 1001, 1008
MflI	RGATCY	3 cut(s)	447, 461, 1006
MhlI	GDGCHC	1 cut(s)	169
MlsI	TGGCCA	1 cut(s)	577
MluCI	AATT	2 cut(s)	556, 619
MluNI	TGGCCA	1 cut(s)	577
MlyI	GAGTC	1 cut(s)	544
MnlI	CCTC	9 cut(s)	110, 155, 220, 341, 354, 440, 472, 910, 959
Mox20I	TGGCCA	1 cut(s)	577
Mph1103I	ATGCAT	1 cut(s)	847
MscI	TGGCCA	1 cut(s)	577
MseI	TTAA	2 cut(s)	729, 786
MslI	CAYNNNNRTG	1 cut(s)	387
Msp20I	TGGCCA	1 cut(s)	577
MspCI	CTTAAG	1 cut(s)	728
MspI	CCGG	3 cut(s)	669, 831, 977
MspR9I	CCNGG	1 cut(s)	159
Mva1269I	GAATGC	1 cut(s)	845
MvaI	CCWGG	1 cut(s)	159
MwoI	GCNNNNNNNGC	7 cut(s)	179, 323, 527, 574, 842, 944, 977
NdeII	GATC	6 cut(s)	42, 447, 461, 679, 880, 1006
NlaIII	CATG	2 cut(s)	942, 994
NlaIV	GGNNCC	3 cut(s)	208, 483, 946
NsiI	ATGCAT	1 cut(s)	847
NspI	RCATGY	1 cut(s)	942
PctI	GAATGC	1 cut(s)	845
PfeI	GAWTC	4 cut(s)	34, 56, 303, 410
PfoI	TCCNGGA	1 cut(s)	157
PinAI	ACCGGT	2 cut(s)	668, 830
PkrI	GCNGC	2 cut(s)	529, 592
Ple19I	CGATCG	1 cut(s)	45
PleI	GAGTC	1 cut(s)	543
PpsI	GAGTC	1 cut(s)	543
PpuMI	RGGWCCY	1 cut(s)	752
PsiI	TTATAA	1 cut(s)	635
Psp124BI	GAGCTC	1 cut(s)	169
Psp5II	RGGWCCY	1 cut(s)	752
Psp6I	CCWGG	1 cut(s)	157
PspGI	CCWGG	1 cut(s)	157
PspN4I	GGNNCC	3 cut(s)	208, 483, 946
PspPI	GGNCC	1 cut(s)	752
PspPPI	RGGWCCY	1 cut(s)	752
PstI	CTGCAG	1 cut(s)	532
PsuI	RGATCY	3 cut(s)	447, 461, 1006
PvuI	CGATCG	1 cut(s)	45
RseI	CAYNNNNRTG	1 cut(s)	387
SacI	GAGCTC	1 cut(s)	169
SaqAI	TTAA	2 cut(s)	729, 786
SatI	GCNGC	2 cut(s)	528, 591
Sau3AI	GATC	6 cut(s)	42, 447, 461, 679, 880, 1006
Sau96I	GGNCC	1 cut(s)	752
SchI	GAGTC	1 cut(s)	544
ScrFI	CCNGG	1 cut(s)	159
SduI	GDGCHC	1 cut(s)	169
SfaNI	GCATC	4 cut(s)	391, 832, 972, 985
SfcI	CTRYAG	2 cut(s)	528, 763
SinI	GGWCC	1 cut(s)	752
SmiMI	CAYNNNNRTG	1 cut(s)	387
SmlI	CTYRAG	3 cut(s)	29, 728, 893
SmoI	CTYRAG	3 cut(s)	29, 728, 893
Sse9I	AATT	2 cut(s)	556, 619
SsiI	CCGC	1 cut(s)	855
SspMI	CTAG	2 cut(s)	195, 594
SstI	GAGCTC	1 cut(s)	169
StyD4I	CCNGG	1 cut(s)	157
TaaI	ACNGT	2 cut(s)	112, 955
TaqI	TCGA	2 cut(s)	45, 306
TasI	AATT	2 cut(s)	556, 619
TfiI	GAWTC	4 cut(s)	34, 56, 303, 410
Tru1I	TTAA	2 cut(s)	729, 786
Tru9I	TTAA	2 cut(s)	729, 786
TseI	GCWGC	2 cut(s)	527, 590
TspDTI	ATGAA	4 cut(s)	114, 208, 527, 707
TspGWI	ACGGA	2 cut(s)	334, 474
Vha464I	CTTAAG	1 cut(s)	728
VpaK11BI	GGWCC	1 cut(s)	752
XapI	RAATTY	2 cut(s)	556, 619
XbaI	TCTAGA	1 cut(s)	194
XceI	RCATGY	1 cut(s)	942
XspI	CTAG	2 cut(s)	195, 594
Zsp2I	ATGCAT	1 cut(s)	847

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.