Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0003570

Physical Location & Seq

Genomic Coordinates Forward (+)

28297724 .. 28301506

Gene Structure 3783 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G287100.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1077 bp

ATGGCTAATAATCTCACATCTGCTCTTGATAAAAAATTGGTTCTGGGTGAAGATTCTAAAGATCCTTCCCCAGATGCAAAAGGAGGGTCGAAAGATGACAAGTCCCTGGTTGTTTGCTTTGGGGAAATGCTGATTGACTTTGTGCCCACAGTCGGTGGAGTTTCACTTGCTGAAGCACCTGCGTTTAAAAAAGCTCCTGGTGGTGCTCCTGCTAATGTGGCTGTTGGCGTCTCAAGACTGGGTGGTTCATCAGGTTTTATAGGCAAGGTAGGTGATGATGAATTTGGCTACTTGTTGGCTGACATTTTAAAGCAAAACAATGTTAACAATTCTGGGGTGCGATTTGATCCCAGTGCAAGAACTGCATTGGCATTTGTTACGCTCAGAGCTGATGGAGAGCGTGAATTCCTGTTTTTCCGTAATCCAAGTGCTGATATGCTTCTACGTGAATCAGAACTTGACATAAATCTCATTCAACAGGCAAGAATCTTCCATTATGGTTCAATTAGTTTGATTGACGAACCATGCAGGTCAACCCATCTTGCTGCAATGAGGATTGCCAAGAAGTCTGGTTGCATCCTTTCTTATGATCCAAATTTAAGATTGCCATTGTGGCCATCAGAAGAGGCTGCGCGGAAGGGCATAATGAGTATATGGGATCAAGCAGATATAATCAAGATAAGTGAGGATGAAATCACTTTCCTGACTGGCGGTGATGATCCTTATGATGATAATGTTGTGTTAACCAAGCTTTTTCATCCCAACCTTAAACTGTTGGTAGTAACTGAAGGATCAGAGGGTTGCAGATATTACACTCAGAAATTTCGGGGCCGGGTTGCTGGTGTTAAAGTTAAACCTGTTGATACAACTGGTGCCGGTGATGCATTCGTCAGCGGGGTACTGAACAGCATAGCTTCTGACTTGAGTCTTTTTCAGAATGAGCAGGGGCTACGAGAAGCTCTACTCTTTGCTAATGCATGTGGTGCACTCACAGTAACAGAAAGAGGAGCCATTCCTGCAATGCCAACAAGAGAAGCTGTGCTTCGGTGCTTAGCTCAGGTTGCTGATAAAAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004396 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005975 GO:0005996 GO:0006000 GO:0006082 GO:0006629 GO:0006631 GO:0006633 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0008610 GO:0008865 GO:0009058 GO:0009987 GO:0010035 GO:0010038 GO:0016051 GO:0016053 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019200 GO:0019318 GO:0019752 GO:0032787 GO:0042221 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044262 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0046686 GO:0046835 GO:0050896 GO:0071704 GO:0072330 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00051 ko00500 ko00520 ko01100 map00051 map00500 map00520 map01100

Pfam Domains

Protein Families

PfkB

Protein Analysis

359

Amino Acids

38.49

Weight (kDa)

5.33

Isoelectric Point (pI)

31.25

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003570)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G51830 AT5G51830
fragaria_vesca	FvH4_7g12690 FvH4_7g28710 FvH4_7g28710
malus_domestica	MD00G1004100.v1.1 MD01G1193000.v1.1 MD02G1197500.v1.1 MD15G1307900.v1.1
prunus_persica	Prupe.2G151100_v2.0.a1 Prupe.2G287100_v2.0.a1 Prupe.2G287100_v2.0.a1 Prupe.2G287100_v2.0.a1
pyrus_communis	pycom01g20360 pycom02g16100 pycom07g23930
rosa_chinensis	RchiOBHm_Chr1g0351681 RchiOBHm_Chr1g0376211
rosa_laevigata	RLG00000026619 RLG00000028390
rosa_multiflora	Rmu_sc0000061.1_g000037 Rmu_sc0001144.1_g000004
rosa_roxburghii	Rroxscaffold_4G00282300 Rroxscaffold_4G00303620
rosa_rugosa	Rorug01G0220600 Rorug01G0394400
rosa_samantha	Rh1AG406000 Rh1BG369700 Rh1CG382400 Rh1CG382600 Rh1DG232200 Rh1DG399300 Rh1DG399500
rosa_wichuraiana	Rw1G020430 Rw1G036020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	187
Acc36I	ACCTGC	2 cut(s)	187, 519
AccB1I	GGYRCC	1 cut(s)	872
AccII	CGCG	1 cut(s)	634
AciI	CCGC	3 cut(s)	634, 711, 894
AclWI	GGATC	6 cut(s)	56, 341, 584, 666, 713, 799
AcoI	YGGCCR	1 cut(s)	614
AcsI	RAATTY	4 cut(s)	281, 404, 595, 821
AcuI	CTGAAG	2 cut(s)	192, 807
AcyI	GRCGYC	1 cut(s)	228
AfaI	GTAC	1 cut(s)	900
AfiI	CCNNNNNNNGG	1 cut(s)	152
AgsI	TTSAA	2 cut(s)	476, 504
AjnI	CCWGG	2 cut(s)	105, 196
AluBI	AGCT	7 cut(s)	194, 389, 751, 914, 959, 1037, 1055
AluI	AGCT	7 cut(s)	194, 389, 751, 914, 959, 1037, 1055
Alw21I	GWGCWC	2 cut(s)	208, 988
Alw26I	GTCTC	1 cut(s)	235
Alw44I	GTGCAC	1 cut(s)	984
AlwI	GGATC	6 cut(s)	56, 341, 584, 666, 713, 799
AoxI	GGCC	2 cut(s)	614, 829
ApaLI	GTGCAC	1 cut(s)	984
ApeKI	GCWGC	2 cut(s)	545, 629
ApoI	RAATTY	4 cut(s)	281, 404, 595, 821
ArsI	GACNNNNNNTTYG	2 cut(s)	71, 103
AspLEI	GCGC	1 cut(s)	634
AspS9I	GGNCC	1 cut(s)	829
AsuC2I	CCSGG	1 cut(s)	833
AsuHPI	GGTGA	4 cut(s)	59, 284, 725, 890
BaeGI	GKGCMC	2 cut(s)	147, 988
BalI	TGGCCA	1 cut(s)	616
BanI	GGYRCC	1 cut(s)	872
Bbv12I	GWGCWC	2 cut(s)	208, 988
BbvI	GCAGC	2 cut(s)	532, 616
BccI	CCATC	3 cut(s)	386, 546, 625
BciT130I	CCWGG	2 cut(s)	107, 198
BcnI	CCSGG	1 cut(s)	833
BcoDI	GTCTC	1 cut(s)	235
BfuAI	ACCTGC	2 cut(s)	187, 519
BglI	GCCNNNNNGGC	1 cut(s)	613
BisI	GCNGC	2 cut(s)	546, 630
BlpI	GCTNAGC	1 cut(s)	1051
BlsI	GCNGC	2 cut(s)	547, 631
Bme1390I	CCNGG	3 cut(s)	107, 198, 833
BmgT120I	GGNCC	1 cut(s)	829
BmiI	GGNNCC	3 cut(s)	830, 874, 1009
BmrFI	CCNGG	3 cut(s)	107, 198, 833
BmrI	ACTGGG	2 cut(s)	248, 345
BmsI	GCATC	3 cut(s)	64, 585, 871
BmuI	ACTGGG	2 cut(s)	248, 345
BoxI	GACNNNNGTC	1 cut(s)	924
Bpu10I	CCTNAGC	1 cut(s)	1056
Bpu1102I	GCTNAGC	1 cut(s)	1051
BpuEI	CTTGAG	2 cut(s)	217, 943
BpuMI	CCSGG	1 cut(s)	833
BsaAI	YACGTR	1 cut(s)	446
BsaHI	GRCGYC	1 cut(s)	228
BsaJI	CCNNGG	1 cut(s)	105
Bsc4I	CCNNNNNNNGG	1 cut(s)	152
Bse118I	RCCGGY	1 cut(s)	875
Bse1I	ACTGG	4 cut(s)	243, 351, 712, 874
Bse3DI	GCAATG	2 cut(s)	555, 1026
BseBI	CCWGG	2 cut(s)	107, 198
BseDI	CCNNGG	1 cut(s)	105
BseGI	GGATG	3 cut(s)	576, 694, 757
BseLI	CCNNNNNNNGG	1 cut(s)	152
BseMI	GCAATG	2 cut(s)	555, 1026
BseMII	CTCAG	3 cut(s)	397, 830, 1070
BseNI	ACTGG	4 cut(s)	243, 351, 712, 874
BseRI	GAGGAG	1 cut(s)	1020
BseSI	GKGCMC	2 cut(s)	147, 988
BseXI	GCAGC	2 cut(s)	532, 616
Bsh1236I	CGCG	1 cut(s)	634
BshFI	GGCC	2 cut(s)	616, 831
BshNI	GGYRCC	1 cut(s)	872
BsiHKAI	GWGCWC	2 cut(s)	208, 988
BsiSI	CCGG	2 cut(s)	832, 876
BslFI	GGGAC	1 cut(s)	88
BslI	CCNNNNNNNGG	1 cut(s)	152
BsmAI	GTCTC	1 cut(s)	235
BsmBI	CGTCTC	1 cut(s)	235
BsmFI	GGGAC	1 cut(s)	88
BsmI	GAATGC	1 cut(s)	884
BsnI	GGCC	2 cut(s)	616, 831
Bsp1286I	GDGCHC	3 cut(s)	147, 208, 988
Bsp143I	GATC	6 cut(s)	61, 346, 589, 658, 718, 791
Bsp1720I	GCTNAGC	1 cut(s)	1051
BspACI	CCGC	3 cut(s)	634, 711, 894
BspANI	GGCC	2 cut(s)	616, 831
BspCNI	CTCAG	3 cut(s)	396, 829, 1069
BspFNI	CGCG	1 cut(s)	634
BspLI	GGNNCC	3 cut(s)	830, 874, 1009
BspMI	ACCTGC	2 cut(s)	187, 519
BspPI	GGATC	6 cut(s)	56, 341, 584, 666, 713, 799
BspT107I	GGYRCC	1 cut(s)	872
BsrDI	GCAATG	2 cut(s)	555, 1026
BsrFI	RCCGGY	1 cut(s)	875
BsrI	ACTGG	4 cut(s)	243, 351, 712, 874
BssAI	RCCGGY	1 cut(s)	875
BssECI	CCNNGG	1 cut(s)	105
BssMI	GATC	6 cut(s)	61, 346, 589, 658, 718, 791
BssNI	GRCGYC	1 cut(s)	228
Bst2UI	CCWGG	2 cut(s)	107, 198
Bst4CI	ACNGT	3 cut(s)	151, 774, 994
Bst6I	CTCTTC	1 cut(s)	618
BstACI	GRCGYC	1 cut(s)	228
BstAPI	GCANNNNNTGC	2 cut(s)	362, 983
BstBAI	YACGTR	1 cut(s)	446
BstDEI	CTNAG	4 cut(s)	383, 816, 1051, 1056
BstF5I	GGATG	3 cut(s)	576, 694, 757
BstFNI	CGCG	1 cut(s)	634
BstHHI	GCGC	1 cut(s)	634
BstKTI	GATC	6 cut(s)	64, 349, 592, 661, 721, 794
BstMAI	GTCTC	1 cut(s)	235
BstMBI	GATC	6 cut(s)	61, 346, 589, 658, 718, 791
BstMWI	GCNNNNNNNGC	7 cut(s)	218, 362, 613, 881, 983, 1016, 1061
BstNI	CCWGG	2 cut(s)	107, 198
BstNSI	RCATGY	1 cut(s)	981
BstPAI	GACNNNNGTC	1 cut(s)	924
BstSCI	CCNGG	3 cut(s)	105, 196, 831
BstSLI	GKGCMC	2 cut(s)	147, 988
BstUI	CGCG	1 cut(s)	634
BstV1I	GCAGC	2 cut(s)	532, 616
BstX2I	RGATCY	1 cut(s)	61
BstYI	RGATCY	1 cut(s)	61
BsuRI	GGCC	2 cut(s)	616, 831
BtsCI	GGATG	3 cut(s)	576, 694, 757
BtsIMutI	CAGTG	1 cut(s)	358
BveI	ACCTGC	2 cut(s)	187, 519
CfoI	GCGC	1 cut(s)	634
Cfr10I	RCCGGY	1 cut(s)	875
Cfr13I	GGNCC	1 cut(s)	829
CseI	GACGC	1 cut(s)	217
Csp6I	GTAC	1 cut(s)	899
CviAII	CATG	2 cut(s)	525, 978
CviQI	GTAC	1 cut(s)	899
DdeI	CTNAG	4 cut(s)	383, 816, 1051, 1056
DpnI	GATC	6 cut(s)	63, 348, 591, 660, 720, 793
DpnII	GATC	6 cut(s)	61, 346, 589, 658, 718, 791
DraI	TTTAAA	2 cut(s)	187, 309
EaeI	YGGCCR	1 cut(s)	614
Eam1104I	CTCTTC	1 cut(s)	618
EarI	CTCTTC	1 cut(s)	618
Eco57I	CTGAAG	2 cut(s)	192, 807
EcoRI	GAATTC	1 cut(s)	404
EcoRII	CCWGG	2 cut(s)	105, 196
EcoT22I	ATGCAT	2 cut(s)	886, 979
Esp3I	CGTCTC	1 cut(s)	235
FaeI	CATG	2 cut(s)	528, 981
FalI	AAGNNNNNCTT	2 cut(s)	1026, 1058
FaqI	GGGAC	1 cut(s)	88
FatI	CATG	2 cut(s)	524, 977
FauI	CCCGC	1 cut(s)	887
Fnu4HI	GCNGC	2 cut(s)	546, 630
FokI	GGATG	3 cut(s)	563, 701, 744
Fsp4HI	GCNGC	2 cut(s)	546, 630
GlaI	GCGC	1 cut(s)	633
GluI	GCNGC	2 cut(s)	546, 630
HaeIII	GGCC	2 cut(s)	616, 831
HapII	CCGG	2 cut(s)	832, 876
HgaI	GACGC	1 cut(s)	217
HhaI	GCGC	1 cut(s)	634
Hin1I	GRCGYC	1 cut(s)	228
Hin1II	CATG	2 cut(s)	528, 981
Hin6I	GCGC	1 cut(s)	632
HinP1I	GCGC	1 cut(s)	632
HincII	GTYRAC	3 cut(s)	325, 534, 744
HindII	GTYRAC	3 cut(s)	325, 534, 744
HindIII	AAGCTT	1 cut(s)	749
HinfI	GANTC	4 cut(s)	53, 449, 486, 925
HpaI	GTTAAC	2 cut(s)	325, 744
HpaII	CCGG	2 cut(s)	832, 876
HphI	GGTGA	4 cut(s)	59, 284, 725, 890
Hpy166II	GTNNAC	4 cut(s)	325, 534, 744, 986
Hpy188I	TCNGA	7 cut(s)	386, 454, 622, 796, 819, 919, 936
Hpy188III	TCNNGA	4 cut(s)	26, 234, 676, 703
Hpy8I	GTNNAC	4 cut(s)	325, 534, 744, 986
HpyAV	CCTTC	3 cut(s)	75, 631, 782
HpyCH4III	ACNGT	3 cut(s)	151, 774, 994
HpyCH4IV	ACGT	1 cut(s)	445
HpyF10VI	GCNNNNNNNGC	7 cut(s)	218, 362, 613, 881, 983, 1016, 1061
HpyF3I	CTNAG	4 cut(s)	383, 816, 1051, 1056
HpySE526I	ACGT	1 cut(s)	445
Hsp92I	GRCGYC	1 cut(s)	228
Hsp92II	CATG	2 cut(s)	528, 981
HspAI	GCGC	1 cut(s)	632
KspAI	GTTAAC	2 cut(s)	325, 744
Kzo9I	GATC	6 cut(s)	61, 346, 589, 658, 718, 791
LmnI	GCTCC	3 cut(s)	199, 211, 1007
Lsp1109I	GCAGC	2 cut(s)	532, 616
LweI	GCATC	3 cut(s)	64, 585, 871
MaeII	ACGT	1 cut(s)	445
MaeIII	GTNAC	3 cut(s)	376, 781, 994
MalI	GATC	6 cut(s)	63, 348, 591, 660, 720, 793
MboI	GATC	6 cut(s)	61, 346, 589, 658, 718, 791
MboII	GAAGA	3 cut(s)	62, 481, 635
MflI	RGATCY	1 cut(s)	61
MhlI	GDGCHC	3 cut(s)	147, 208, 988
MlsI	TGGCCA	1 cut(s)	616
MluCI	AATT	7 cut(s)	35, 281, 328, 404, 504, 595, 821
MluNI	TGGCCA	1 cut(s)	616
MlyI	GAGTC	1 cut(s)	934
MnlI	CCTC	6 cut(s)	77, 546, 619, 679, 790, 998
Mox20I	TGGCCA	1 cut(s)	616
Mph1103I	ATGCAT	2 cut(s)	886, 979
MscI	TGGCCA	1 cut(s)	616
MseI	TTAA	8 cut(s)	186, 308, 324, 599, 743, 768, 846, 852
Msp20I	TGGCCA	1 cut(s)	616
MspA1I	CMGCKG	1 cut(s)	894
MspI	CCGG	2 cut(s)	832, 876
MspR9I	CCNGG	3 cut(s)	107, 198, 833
Mva1269I	GAATGC	1 cut(s)	884
MvaI	CCWGG	2 cut(s)	107, 198
MvnI	CGCG	1 cut(s)	634
MwoI	GCNNNNNNNGC	7 cut(s)	218, 362, 613, 881, 983, 1016, 1061
NciI	CCSGG	1 cut(s)	833
NdeII	GATC	6 cut(s)	61, 346, 589, 658, 718, 791
NlaIII	CATG	2 cut(s)	528, 981
NlaIV	GGNNCC	3 cut(s)	830, 874, 1009
NsiI	ATGCAT	2 cut(s)	886, 979
NspI	RCATGY	1 cut(s)	981
PaqCI	CACCTGC	1 cut(s)	187
PctI	GAATGC	1 cut(s)	884
PfeI	GAWTC	3 cut(s)	53, 449, 486
PkrI	GCNGC	2 cut(s)	547, 631
PleI	GAGTC	1 cut(s)	933
PpsI	GAGTC	1 cut(s)	933
Ppu21I	YACGTR	1 cut(s)	446
PshAI	GACNNNNGTC	1 cut(s)	924
Psp6I	CCWGG	2 cut(s)	105, 196
PspGI	CCWGG	2 cut(s)	105, 196
PspN4I	GGNNCC	3 cut(s)	830, 874, 1009
PspPI	GGNCC	1 cut(s)	829
PsuI	RGATCY	1 cut(s)	61
RsaI	GTAC	1 cut(s)	900
RsaNI	GTAC	1 cut(s)	899
SaqAI	TTAA	8 cut(s)	186, 308, 324, 599, 743, 768, 846, 852
SatI	GCNGC	2 cut(s)	546, 630
Sau3AI	GATC	6 cut(s)	61, 346, 589, 658, 718, 791
Sau96I	GGNCC	1 cut(s)	829
SchI	GAGTC	1 cut(s)	934
ScrFI	CCNGG	3 cut(s)	107, 198, 833
SduI	GDGCHC	3 cut(s)	147, 208, 988
SfaNI	GCATC	3 cut(s)	64, 585, 871
SmlI	CTYRAG	2 cut(s)	232, 922
SmoI	CTYRAG	2 cut(s)	232, 922
Sse9I	AATT	7 cut(s)	35, 281, 328, 404, 504, 595, 821
SsiI	CCGC	3 cut(s)	634, 711, 894
StyD4I	CCNGG	3 cut(s)	105, 196, 831
TaaI	ACNGT	3 cut(s)	151, 774, 994
TaiI	ACGT	1 cut(s)	448
TaqI	TCGA	1 cut(s)	89
TasI	AATT	7 cut(s)	35, 281, 328, 404, 504, 595, 821
TfiI	GAWTC	3 cut(s)	53, 449, 486
Tru1I	TTAA	8 cut(s)	186, 308, 324, 599, 743, 768, 846, 852
Tru9I	TTAA	8 cut(s)	186, 308, 324, 599, 743, 768, 846, 852
TscAI	CASTG	1 cut(s)	358
TseI	GCWGC	2 cut(s)	545, 629
TspDTI	ATGAA	4 cut(s)	237, 294, 705, 746
TspGWI	ACGGA	1 cut(s)	407
TspRI	CASTG	1 cut(s)	358
VneI	GTGCAC	1 cut(s)	984
XapI	RAATTY	4 cut(s)	281, 404, 595, 821
XceI	RCATGY	1 cut(s)	981
Zsp2I	ATGCAT	2 cut(s)	886, 979

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.