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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G50640 AT5G66800 |
| fragaria_vesca | FvH4_1g15910 |
| malus_domestica | MD02G1170900.v1.1 MD15G1282400.v1.1 |
| prunus_persica | Prupe.7G134700_v2.0.a1 |
| pyrus_communis | pycom02g13740 |
| rosa_chinensis | RchiOBHm_Chr2g0105301 |
| rosa_laevigata | RLG00000009823 RLG00000017414 RLG00000030156 |
| rosa_multiflora | Rmu_sc0000329.1_g000019 Rmu_sc0001074.1_g000009 Rmu_sc0001407.1_g000013 Rmu_sc0003511.1_g000008 |
| rosa_roxburghii | Rroxscaffold_2G00138320 Rroxscaffold_6G00402960 |
| rosa_rugosa | Rorug02G0127400 |
| rosa_samantha | Rh2AG178000 Rh2BG186400 Rh2BG403700 Rh2CG182600 Rh2DG184000 Rh4DG108700 Rh6AG134000 |
| rosa_wichuraiana | Rw2G013980 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcvI | CACGTG | 1 cut(s) | 317 |
| AfaI | GTAC | 1 cut(s) | 20 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 393, 421, 432 |
| AflII | CTTAAG | 1 cut(s) | 416 |
| AgsI | TTSAA | 2 cut(s) | 244, 293 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 392, 424 |
| AluBI | AGCT | 3 cut(s) | 206, 232, 283 |
| AluI | AGCT | 3 cut(s) | 206, 232, 283 |
| Alw26I | GTCTC | 2 cut(s) | 92, 187 |
| AoxI | GGCC | 3 cut(s) | 92, 412, 423 |
| ApaI | GGGCCC | 1 cut(s) | 427 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 282 |
| AspS9I | GGNCC | 4 cut(s) | 311, 412, 423, 424 |
| AvaII | GGWCC | 1 cut(s) | 311 |
| BaeGI | GKGCMC | 1 cut(s) | 427 |
| BanII | GRGCYC | 1 cut(s) | 427 |
| BbrPI | CACGTG | 1 cut(s) | 317 |
| BbsI | GAAGAC | 1 cut(s) | 303 |
| BcoDI | GTCTC | 2 cut(s) | 92, 187 |
| BfaI | CTAG | 1 cut(s) | 57 |
| BfrI | CTTAAG | 1 cut(s) | 416 |
| Bme18I | GGWCC | 1 cut(s) | 311 |
| BmgT120I | GGNCC | 4 cut(s) | 311, 412, 423, 424 |
| BmiI | GGNNCC | 1 cut(s) | 425 |
| BmsI | GCATC | 2 cut(s) | 189, 310 |
| BpiI | GAAGAC | 1 cut(s) | 303 |
| BpuEI | CTTGAG | 1 cut(s) | 326 |
| BsaAI | YACGTR | 1 cut(s) | 317 |
| BsaJI | CCNNGG | 1 cut(s) | 387 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 393, 421, 432 |
| BseDI | CCNNGG | 1 cut(s) | 387 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 393, 421, 432 |
| BseMII | CTCAG | 1 cut(s) | 506 |
| BseSI | GKGCMC | 1 cut(s) | 427 |
| BshFI | GGCC | 3 cut(s) | 94, 414, 425 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 393, 421, 432 |
| BsmAI | GTCTC | 2 cut(s) | 92, 187 |
| BsmBI | CGTCTC | 1 cut(s) | 92 |
| BsnI | GGCC | 3 cut(s) | 94, 414, 425 |
| Bsp120I | GGGCCC | 1 cut(s) | 423 |
| Bsp1286I | GDGCHC | 1 cut(s) | 427 |
| Bsp1407I | TGTACA | 1 cut(s) | 18 |
| Bsp143I | GATC | 1 cut(s) | 116 |
| BspANI | GGCC | 3 cut(s) | 94, 414, 425 |
| BspCNI | CTCAG | 1 cut(s) | 505 |
| BspLI | GGNNCC | 1 cut(s) | 425 |
| BspQI | GCTCTTC | 2 cut(s) | 273, 444 |
| BspTI | CTTAAG | 1 cut(s) | 416 |
| BsrGI | TGTACA | 1 cut(s) | 18 |
| BssECI | CCNNGG | 1 cut(s) | 387 |
| BssMI | GATC | 1 cut(s) | 116 |
| BssT1I | CCWWGG | 1 cut(s) | 387 |
| Bst6I | CTCTTC | 4 cut(s) | 273, 444, 505, 536 |
| BstAFI | CTTAAG | 1 cut(s) | 416 |
| BstAUI | TGTACA | 1 cut(s) | 18 |
| BstBAI | YACGTR | 1 cut(s) | 317 |
| BstC8I | GCNNGC | 2 cut(s) | 7, 204 |
| BstDEI | CTNAG | 3 cut(s) | 10, 438, 492 |
| BstKTI | GATC | 1 cut(s) | 119 |
| BstMAI | GTCTC | 2 cut(s) | 92, 187 |
| BstMBI | GATC | 1 cut(s) | 116 |
| BstNSI | RCATGY | 1 cut(s) | 9 |
| BstSLI | GKGCMC | 1 cut(s) | 427 |
| BstV2I | GAAGAC | 1 cut(s) | 303 |
| BsuRI | GGCC | 3 cut(s) | 94, 414, 425 |
| Cac8I | GCNNGC | 2 cut(s) | 7, 204 |
| Cfr13I | GGNCC | 4 cut(s) | 311, 412, 423, 424 |
| Csp6I | GTAC | 1 cut(s) | 19 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 16, 51 |
| CviAII | CATG | 3 cut(s) | 6, 49, 428 |
| CviJI | RGCY | 9 cut(s) | 94, 123, 206, 232, 283, 346, 406, 414, 425 |
| CviKI_1 | RGCY | 9 cut(s) | 94, 123, 206, 232, 283, 346, 406, 414, 425 |
| CviQI | GTAC | 1 cut(s) | 19 |
| DdeI | CTNAG | 3 cut(s) | 10, 438, 492 |
| DpnI | GATC | 1 cut(s) | 118 |
| DpnII | GATC | 1 cut(s) | 116 |
| Eam1104I | CTCTTC | 4 cut(s) | 273, 444, 505, 536 |
| EarI | CTCTTC | 4 cut(s) | 273, 444, 505, 536 |
| Eco130I | CCWWGG | 1 cut(s) | 387 |
| Eco24I | GRGCYC | 1 cut(s) | 427 |
| Eco47I | GGWCC | 1 cut(s) | 311 |
| Eco72I | CACGTG | 1 cut(s) | 317 |
| EcoO109I | RGGNCCY | 1 cut(s) | 423 |
| EcoT14I | CCWWGG | 1 cut(s) | 387 |
| EcoT38I | GRGCYC | 1 cut(s) | 427 |
| ErhI | CCWWGG | 1 cut(s) | 387 |
| Esp3I | CGTCTC | 1 cut(s) | 92 |
| FaeI | CATG | 3 cut(s) | 9, 52, 431 |
| FaiI | YATR | 6 cut(s) | 7, 50, 429, 468, 470, 548 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 216, 248 |
| FatI | CATG | 3 cut(s) | 5, 48, 427 |
| FauNDI | CATATG | 1 cut(s) | 468 |
| FriOI | GRGCYC | 1 cut(s) | 427 |
| FspBI | CTAG | 1 cut(s) | 57 |
| HaeIII | GGCC | 3 cut(s) | 94, 414, 425 |
| Hin1II | CATG | 3 cut(s) | 9, 52, 431 |
| HindIII | AAGCTT | 1 cut(s) | 230 |
| HinfI | GANTC | 2 cut(s) | 52, 60 |
| Hpy166II | GTNNAC | 1 cut(s) | 314 |
| Hpy188I | TCNGA | 1 cut(s) | 163 |
| Hpy188III | TCNNGA | 2 cut(s) | 262, 494 |
| Hpy8I | GTNNAC | 1 cut(s) | 314 |
| Hpy99I | CGWCG | 1 cut(s) | 115 |
| HpyAV | CCTTC | 4 cut(s) | 76, 302, 387, 509 |
| HpyCH4IV | ACGT | 1 cut(s) | 316 |
| HpyCH4V | TGCA | 1 cut(s) | 528 |
| HpyF3I | CTNAG | 3 cut(s) | 10, 438, 492 |
| HpySE526I | ACGT | 1 cut(s) | 316 |
| Hsp92II | CATG | 3 cut(s) | 9, 52, 431 |
| Kzo9I | GATC | 1 cut(s) | 116 |
| LguI | GCTCTTC | 2 cut(s) | 273, 444 |
| LpnPI | CCDG | 5 cut(s) | 108, 216, 275, 479, 514 |
| LweI | GCATC | 2 cut(s) | 189, 310 |
| MaeI | CTAG | 1 cut(s) | 57 |
| MaeII | ACGT | 1 cut(s) | 316 |
| MalI | GATC | 1 cut(s) | 118 |
| MboI | GATC | 1 cut(s) | 116 |
| MfeI | CAATTG | 1 cut(s) | 501 |
| MhlI | GDGCHC | 1 cut(s) | 427 |
| MluCI | AATT | 2 cut(s) | 166, 501 |
| MlyI | GAGTC | 1 cut(s) | 61 |
| MnlI | CCTC | 3 cut(s) | 133, 135, 414 |
| MroXI | GAANNNNTTC | 1 cut(s) | 282 |
| MseI | TTAA | 3 cut(s) | 272, 417, 474 |
| MslI | CAYNNNNRTG | 1 cut(s) | 197 |
| MspA1I | CMGCKG | 1 cut(s) | 206 |
| MspCI | CTTAAG | 1 cut(s) | 416 |
| MunI | CAATTG | 1 cut(s) | 501 |
| NdeI | CATATG | 1 cut(s) | 468 |
| NdeII | GATC | 1 cut(s) | 116 |
| NlaIII | CATG | 3 cut(s) | 9, 52, 431 |
| NlaIV | GGNNCC | 1 cut(s) | 425 |
| NspI | RCATGY | 1 cut(s) | 9 |
| PaeI | GCATGC | 1 cut(s) | 9 |
| PciSI | GCTCTTC | 2 cut(s) | 273, 444 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 107 |
| PdmI | GAANNNNTTC | 1 cut(s) | 282 |
| PfeI | GAWTC | 1 cut(s) | 60 |
| PleI | GAGTC | 1 cut(s) | 60 |
| PmaCI | CACGTG | 1 cut(s) | 317 |
| PmlI | CACGTG | 1 cut(s) | 317 |
| PpsI | GAGTC | 1 cut(s) | 60 |
| Ppu21I | YACGTR | 1 cut(s) | 317 |
| PspCI | CACGTG | 1 cut(s) | 317 |
| PspN4I | GGNNCC | 1 cut(s) | 425 |
| PspOMI | GGGCCC | 1 cut(s) | 423 |
| PspPI | GGNCC | 4 cut(s) | 311, 412, 423, 424 |
| PvuII | CAGCTG | 1 cut(s) | 206 |
| RsaI | GTAC | 1 cut(s) | 20 |
| RsaNI | GTAC | 1 cut(s) | 19 |
| RseI | CAYNNNNRTG | 1 cut(s) | 197 |
| SapI | GCTCTTC | 2 cut(s) | 273, 444 |
| SaqAI | TTAA | 3 cut(s) | 272, 417, 474 |
| Sau3AI | GATC | 1 cut(s) | 116 |
| Sau96I | GGNCC | 4 cut(s) | 311, 412, 423, 424 |
| SchI | GAGTC | 1 cut(s) | 61 |
| SduI | GDGCHC | 1 cut(s) | 427 |
| SetI | ASST | 6 cut(s) | 208, 234, 285, 313, 319, 398 |
| SfaNI | GCATC | 2 cut(s) | 189, 310 |
| SinI | GGWCC | 1 cut(s) | 311 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 197 |
| SmlI | CTYRAG | 2 cut(s) | 341, 416 |
| SmoI | CTYRAG | 2 cut(s) | 341, 416 |
| SphI | GCATGC | 1 cut(s) | 9 |
| Sse9I | AATT | 2 cut(s) | 166, 501 |
| SspMI | CTAG | 1 cut(s) | 57 |
| StyI | CCWWGG | 1 cut(s) | 387 |
| TaiI | ACGT | 1 cut(s) | 319 |
| TaqI | TCGA | 1 cut(s) | 171 |
| TasI | AATT | 2 cut(s) | 166, 501 |
| TatI | WGTACW | 1 cut(s) | 18 |
| TfiI | GAWTC | 1 cut(s) | 60 |
| Tru1I | TTAA | 3 cut(s) | 272, 417, 474 |
| Tru9I | TTAA | 3 cut(s) | 272, 417, 474 |
| TspDTI | ATGAA | 4 cut(s) | 225, 452, 462, 551 |
| Vha464I | CTTAAG | 1 cut(s) | 416 |
| VpaK11BI | GGWCC | 1 cut(s) | 311 |
| XceI | RCATGY | 1 cut(s) | 9 |
| XmnI | GAANNNNTTC | 1 cut(s) | 282 |
| XspI | CTAG | 1 cut(s) | 57 |