Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0005283

Physical Location & Seq

Genomic Coordinates Forward (+)

2807423 .. 2812147

Gene Structure 4725 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g05280.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1956 bp

ATGGCCGATCTTTTGAAGACCACTAACAAGACAAATAAGAAGCAGGAGTCAAAAAAAGCCTCTTCTAGTCCAAACAATCATGTTTCTAAAAAGCAATCCAGAAAGGGGGATAATCCCATCAGACTCTCACCGGCTTCTGAGCAGTCTCCAGATTTTGGATATTCGAACTCATGGATCTGTAAAAACTCTGCTTGTAGAGCTGTTATATCCATAGACAACACATTCTGCAAGAGATGCTCCTGCTGTATTTGTCATTTGTTTGATGACAACAAGGACCCTAGTCTTTGGTTAGTATGTACATCTGAATCTGGTGAGGGAGACTCATGTGGGTTATCTTGTCACATTGACTGCGCACTTCGACGTGAAAAGGTGGGAGTTGTTGATCTTGGGCAATTGATGCAGCTAGATGGTAGTTATTGTTGTGCTTCATGTGGTAAAGTTTCTGGGATACTTGGAATTTGGAAGAAGCAGCTACTTGTAGCAAAGGATGCTCGTCGTGTTGATGTACTTTGGGACAGGATATGCTTGAGTTATAAGCTTCTGGATGGGACTTCAAGGTTTAAAGAACTTCATGATATTGTGAAGGAAGCCAAGACTAAACTTGAGAAAGAAGTGGGTCCAATTAATGGAGAGTCTGGAACAATGGTACGTGGGATAGTCAGCAGGCTATCTATCGCTGGTGCTGTACTGAAACTCTGTTCTCTTGCAATTGAGAAAGCTGATGAATGGTTGGCTAATGTTTCTAGTGCAGATCCAAACAGAGAGGGTTCACTACCAGCTGCCTGCAAGTTTCTCTTTGAGGAAGTAACACCTTCATCTGTTGTGATCATATTGATCGAACTGTCTAATGCATCAGCTGATGACATCAAGGGCTACAAGCTCTGGTACTACAAGAGCAGAGAAGAATTGCCCACAAAAGAGCCTACTTGTACCTTTTCAAGATCTCAGAGACGAATTTTGATCTCCAATCTGCAGCCTTGCACAGAGTATACTTTTAGGATAATATCCTATACTGAGACTGGTGACTTGGGTCACTCTGAGGCAAAGTGTTTCACCAAGAGTGTTGAGTTAATTCATAAAAACCTGGATTCACCGGTCTGCAGGAATCATAAGAAAGAGAATCCCGTCATTGAGGCAAATTCTAGTTCCATGAGGGAGCCTGAAACTACAACAGCAGTTGTGCCCTCTTCTGAATTTAAAGTTCGTGATCTTGGAAAGATACTTCGTCTGGCTCAGGCTCAGGCTCAACAGAAAGGCTCCTTAGAGGGCTTTTGTAGTGCCAACAAAGAAAAATGTTGTGGACCAAGCAACCCGATAAAAACTGAAACTTTACAAGAAGAGTTACCTTCTGTTTCACGTGGGCTTGACTTGAATGTTCTTTCAATGCCCGATCTGAATGAAGAGCTAACCCCGCCCTTTGAGTCATCCAGAGATGAAGATAATGGATGCACTCTGCAGCAGACCGTGGAGGCAGATGATGATGCTGCCTCTCATGAGATGGTGAAAAATGGCCTGGCAAGATCACATGGTAGTGGTGATTCACAGACCTGGACTCATGGGATTACTGGAGATGTCCCTGCTGTTGATTCCCGGGCAGAAAATGGCAGGAAGAGGAAAGGAAACACAAATGAAGAGACCCATGATTGTGACAGCACACTGATAAATGGGCCACCATTGCAAAATGGTTCTTGTTGCTTGGATGAGAACTTTGAGTACTGTGTGAAAATTATCAGGTGGCTGGAATGCGAGGGTCACCTTACAGAGGAATTCAGGTTGAAGTTGCTAACATGGTTCAGTTTGAGATCAACTGAGCAAGAGCGTAGGGTGGTGAACACCTTTATTCAAACTATGATTGATGATCCAAGTAGCTTGGCAGGACAGTTAGTTGACTCCTTTTCGGACATCATATCCCGCAAGAGGCAACGGAACGGATTCTGTAGTAAGCTCTGGCATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001666 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005677 GO:0006950 GO:0008150 GO:0009266 GO:0009409 GO:0009628 GO:0009892 GO:0009893 GO:0009987 GO:0010048 GO:0010468 GO:0010604 GO:0010605 GO:0010629 GO:0010638 GO:0016604 GO:0016607 GO:0017053 GO:0019222 GO:0031056 GO:0031058 GO:0031060 GO:0031062 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0031974 GO:0031981 GO:0032268 GO:0032270 GO:0032991 GO:0033043 GO:0033044 GO:0033554 GO:0036293 GO:0040029 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045814 GO:0048518 GO:0048519 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0051569 GO:0051571 GO:0051716 GO:0060255 GO:0061085 GO:0061087 GO:0065007 GO:0070013 GO:0070417 GO:0070482 GO:0080090 GO:0090568 GO:1902275 GO:1905269 GO:2001252

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PHD_Oberon fn3

Protein Analysis

652

Amino Acids

72.28

Weight (kDa)

6.19

Isoelectric Point (pI)

56.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PHD_Oberon	PF07227	60 - 178	1.2e-32	PHD - plant homeodomain finger protein
Fn3_VIN3	PF23376	265 - 352	6.2e-31	VIN3-like, fibronectin type-III domain
fn3	PF00041	266 - 346	3.9e-06	Fibronectin type III domain
VIN3_C	PF23380	567 - 640	5.5e-40	VIN3-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0005283)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G18870 AT3G24440 AT3G24440
fragaria_vesca	FvH4_1g05280
malus_domestica	MD02G1056200.v1.1 MD15G1189100.v1.1
pyrus_communis	pycom02g04520 pycom02g04530 pycom15g16940 pycom15g16950
rosa_chinensis	RchiOBHm_Chr2g0091001
rosa_laevigata	RLG00000015776 RLG00000016165
rosa_multiflora	Rmu_sc0003305.1_g000004 Rmu_sc0004626.1_g000008
rosa_roxburghii	Rroxscaffold_2G00150700 Rroxscaffold_2G00154300 Rroxscaffold_2G00154540
rosa_rugosa	Rorug01G0468700 Rorug01G0468800 Rorug02G0011400
rosa_samantha	Rh2BG020600 Rh2BG056000 Rh2CG020200 Rh2CG020500 Rh2CG021200 Rh2CG058300 Rh2DG057400
rosa_wichuraiana	Rw2G005160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	534
Acc16I	TGCGCA	1 cut(s)	352
AccB7I	CCANNNNNTGG	2 cut(s)	155, 626
AccI	GTMKAC	1 cut(s)	989
AciI	CCGC	2 cut(s)	1412, 1912
AclWI	GGATC	3 cut(s)	182, 746, 1853
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	5 cut(s)	456, 954, 1138, 1193, 1766
AcvI	CACGTG	1 cut(s)	1358
AfaI	GTAC	7 cut(s)	298, 507, 648, 687, 887, 931, 1715
AfiI	CCNNNNNNNGG	5 cut(s)	105, 155, 626, 1762, 1917
AgeI	ACCGGT	1 cut(s)	1093
AgsI	TTSAA	7 cut(s)	16, 555, 939, 1372, 1383, 1777, 1844
AjiI	CACGTC	1 cut(s)	362
AjnI	CCWGG	3 cut(s)	1083, 1512, 1547
Alw26I	GTCTC	5 cut(s)	150, 312, 943, 1010, 1628
AlwI	GGATC	3 cut(s)	182, 746, 1853
Ama87I	CYCGRG	1 cut(s)	1590
AoxI	GGCC	3 cut(s)	3, 1510, 1667
ApeKI	GCWGC	6 cut(s)	400, 469, 779, 973, 1456, 1484
ApoI	RAATTY	5 cut(s)	456, 954, 1138, 1193, 1766
AseI	ATTAAT	1 cut(s)	624
AsiGI	ACCGGT	1 cut(s)	1093
Asp700I	GAANNNNTTC	1 cut(s)	1931
AspLEI	GCGC	1 cut(s)	353
AspS9I	GGNCC	4 cut(s)	274, 617, 1301, 1667
AsuC2I	CCSGG	2 cut(s)	1591, 1592
AsuHPI	GGTGA	9 cut(s)	120, 323, 1034, 1045, 1083, 1513, 1547, 1745, 1840
AsuII	TTCGAA	1 cut(s)	164
AvaI	CYCGRG	1 cut(s)	1590
AvaII	GGWCC	3 cut(s)	274, 617, 1301
BaeGI	GKGCMC	1 cut(s)	1185
BbrPI	CACGTG	1 cut(s)	1358
BbsI	GAAGAC	1 cut(s)	23
BbvI	GCAGC	6 cut(s)	412, 481, 766, 985, 1468, 1471
BccI	CCATC	4 cut(s)	125, 401, 539, 1492
BciT130I	CCWGG	3 cut(s)	1085, 1514, 1549
BciVI	GTATCC	1 cut(s)	441
BclI	TGATCA	1 cut(s)	825
BcnI	CCSGG	2 cut(s)	1591, 1592
BcoDI	GTCTC	5 cut(s)	150, 312, 943, 1010, 1628
BfaI	CTAG	5 cut(s)	66, 279, 404, 744, 1143
BfmI	CTRYAG	4 cut(s)	971, 1099, 1454, 1936
BfuI	GTATCC	1 cut(s)	441
BglII	AGATCT	1 cut(s)	941
BisI	GCNGC	6 cut(s)	401, 470, 780, 974, 1457, 1485
BlsI	GCNGC	6 cut(s)	402, 471, 781, 975, 1458, 1486
BmcAI	AGTACT	1 cut(s)	1715
Bme1390I	CCNGG	5 cut(s)	1085, 1514, 1549, 1591, 1592
Bme18I	GGWCC	3 cut(s)	274, 617, 1301
BmeT110I	CYCGRG	1 cut(s)	1590
BmgBI	CACGTC	1 cut(s)	362
BmgT120I	GGNCC	4 cut(s)	274, 617, 1301, 1667
BmiI	GGNNCC	4 cut(s)	276, 618, 1158, 1258
BmrFI	CCNGG	5 cut(s)	1085, 1514, 1549, 1591, 1592
BmsI	GCATC	6 cut(s)	224, 387, 478, 860, 1436, 1471
BoxI	GACNNNNGTC	2 cut(s)	279, 1029
BpiI	GAAGAC	1 cut(s)	23
BplI	GAGNNNNNCTC	2 cut(s)	305, 337
BpmI	CTGGAG	2 cut(s)	132, 1587
Bpu10I	CCTNAGC	2 cut(s)	1233, 1239
Bpu14I	TTCGAA	1 cut(s)	164
BpuEI	CTTGAG	2 cut(s)	547, 623
BpuMI	CCSGG	2 cut(s)	1591, 1592
BsaAI	YACGTR	2 cut(s)	650, 1358
BsaI	GGTCTC	1 cut(s)	1628
BsaJI	CCNNGG	2 cut(s)	1464, 1590
BsaWI	WCCGGW	1 cut(s)	1093
Bsc4I	CCNNNNNNNGG	5 cut(s)	105, 155, 626, 1762, 1917
Bse118I	RCCGGY	2 cut(s)	130, 1093
Bse1I	ACTGG	2 cut(s)	1024, 1570
Bse3DI	GCAATG	1 cut(s)	1673
BseBI	CCWGG	3 cut(s)	1085, 1514, 1549
BseDI	CCNNGG	2 cut(s)	1464, 1590
BseGI	GGATG	5 cut(s)	493, 550, 1424, 1451, 1705
BseLI	CCNNNNNNNGG	5 cut(s)	105, 155, 626, 1762, 1917
BseMI	GCAATG	1 cut(s)	1673
BseMII	CTCAG	7 cut(s)	129, 959, 1005, 1029, 1247, 1253, 1800
BseNI	ACTGG	2 cut(s)	1024, 1570
BseSI	GKGCMC	1 cut(s)	1185
BseXI	GCAGC	6 cut(s)	412, 481, 766, 985, 1468, 1471
BsgI	GTGCAG	1 cut(s)	768
BshFI	GGCC	3 cut(s)	5, 1512, 1669
BshTI	ACCGGT	1 cut(s)	1093
BsiHKCI	CYCGRG	1 cut(s)	1590
BsiSI	CCGG	3 cut(s)	131, 1094, 1591
BslFI	GGGAC	3 cut(s)	527, 562, 1559
BslI	CCNNNNNNNGG	5 cut(s)	105, 155, 626, 1762, 1917
BsmAI	GTCTC	5 cut(s)	150, 312, 943, 1010, 1628
BsmBI	CGTCTC	1 cut(s)	943
BsmFI	GGGAC	3 cut(s)	527, 562, 1559
BsmI	GAATGC	1 cut(s)	1748
BsnI	GGCC	3 cut(s)	5, 1512, 1669
Bso31I	GGTCTC	1 cut(s)	1628
BsoBI	CYCGRG	1 cut(s)	1590
Bsp119I	TTCGAA	1 cut(s)	164
Bsp1286I	GDGCHC	1 cut(s)	1185
Bsp1407I	TGTACA	1 cut(s)	296
BspACI	CCGC	2 cut(s)	1412, 1912
BspANI	GGCC	3 cut(s)	5, 1512, 1669
BspCNI	CTCAG	7 cut(s)	130, 958, 1006, 1030, 1246, 1252, 1801
BspHI	TCATGA	2 cut(s)	571, 1492
BspLI	GGNNCC	4 cut(s)	276, 618, 1158, 1258
BspMAI	CTGCAG	3 cut(s)	975, 1103, 1458
BspPI	GGATC	3 cut(s)	182, 746, 1853
BspQI	GCTCTTC	1 cut(s)	1395
BspT104I	TTCGAA	1 cut(s)	164
BspTNI	GGTCTC	1 cut(s)	1628
BsrDI	GCAATG	1 cut(s)	1673
BsrFI	RCCGGY	2 cut(s)	130, 1093
BsrGI	TGTACA	1 cut(s)	296
BsrI	ACTGG	2 cut(s)	1024, 1570
BssAI	RCCGGY	2 cut(s)	130, 1093
BssECI	CCNNGG	2 cut(s)	1464, 1590
BssNAI	GTATAC	1 cut(s)	990
Bst1107I	GTATAC	1 cut(s)	990
Bst2UI	CCWGG	3 cut(s)	1085, 1514, 1549
Bst4CI	ACNGT	4 cut(s)	843, 1465, 1718, 1881
Bst6I	CTCTTC	6 cut(s)	67, 1192, 1332, 1395, 1604, 1626
BstAPI	GCANNNNNTGC	3 cut(s)	234, 397, 488
BstAUI	TGTACA	1 cut(s)	296
BstBAI	YACGTR	2 cut(s)	650, 1358
BstBI	TTCGAA	1 cut(s)	164
BstC8I	GCNNGC	2 cut(s)	665, 784
BstDEI	CTNAG	8 cut(s)	138, 945, 1014, 1038, 1233, 1239, 1261, 1809
BstDSI	CCRYGG	1 cut(s)	1464
BstEII	GGTNACC	1 cut(s)	1751
BstENI	CCTNNNNNAGG	1 cut(s)	1760
BstF5I	GGATG	5 cut(s)	493, 550, 1424, 1451, 1705
BstHHI	GCGC	1 cut(s)	353
BstMAI	GTCTC	5 cut(s)	150, 312, 943, 1010, 1628
BstMWI	GCNNNNNNNGC	6 cut(s)	197, 234, 397, 488, 1411, 1675
BstNI	CCWGG	3 cut(s)	1085, 1514, 1549
BstPAI	GACNNNNGTC	2 cut(s)	279, 1029
BstPI	GGTNACC	1 cut(s)	1751
BstSCI	CCNGG	5 cut(s)	1083, 1512, 1547, 1589, 1590
BstSFI	CTRYAG	4 cut(s)	971, 1099, 1454, 1936
BstSLI	GKGCMC	1 cut(s)	1185
BstV1I	GCAGC	6 cut(s)	412, 481, 766, 985, 1468, 1471
BstV2I	GAAGAC	1 cut(s)	23
BstX2I	RGATCY	3 cut(s)	174, 751, 941
BstYI	RGATCY	3 cut(s)	174, 751, 941
BstZ17I	GTATAC	1 cut(s)	990
BsuI	GTATCC	1 cut(s)	441
BsuRI	GGCC	3 cut(s)	5, 1512, 1669
BtgI	CCRYGG	1 cut(s)	1464
BtrI	CACGTC	1 cut(s)	362
BtsCI	GGATG	5 cut(s)	493, 550, 1424, 1451, 1705
BtsIMutI	CAGTG	1 cut(s)	1655
Cac8I	GCNNGC	2 cut(s)	665, 784
CciI	TCATGA	2 cut(s)	571, 1492
CfoI	GCGC	1 cut(s)	353
Cfr10I	RCCGGY	2 cut(s)	130, 1093
Cfr13I	GGNCC	4 cut(s)	274, 617, 1301, 1667
Cfr9I	CCCGGG	1 cut(s)	1590
Csp6I	GTAC	7 cut(s)	297, 506, 647, 686, 886, 930, 1714
CspAI	ACCGGT	1 cut(s)	1093
CviQI	GTAC	7 cut(s)	297, 506, 647, 686, 886, 930, 1714
DdeI	CTNAG	8 cut(s)	138, 945, 1014, 1038, 1233, 1239, 1261, 1809
DraI	TTTAAA	2 cut(s)	562, 1198
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	6 cut(s)	67, 1192, 1332, 1395, 1604, 1626
EarI	CTCTTC	6 cut(s)	67, 1192, 1332, 1395, 1604, 1626
Eco31I	GGTCTC	1 cut(s)	1628
Eco47I	GGWCC	3 cut(s)	274, 617, 1301
Eco72I	CACGTG	1 cut(s)	1358
Eco88I	CYCGRG	1 cut(s)	1590
Eco91I	GGTNACC	1 cut(s)	1751
EcoNI	CCTNNNNNAGG	1 cut(s)	1760
EcoO109I	RGGNCCY	1 cut(s)	274
EcoO65I	GGTNACC	1 cut(s)	1751
EcoRI	GAATTC	1 cut(s)	1766
EcoRII	CCWGG	3 cut(s)	1083, 1512, 1547
EcoT22I	ATGCAT	1 cut(s)	853
Esp3I	CGTCTC	1 cut(s)	943
FalI	AAGNNNNNCTT	2 cut(s)	779, 811
FaqI	GGGAC	3 cut(s)	527, 562, 1559
FauI	CCCGC	2 cut(s)	1419, 1919
FbaI	TGATCA	1 cut(s)	825
FblI	GTMKAC	1 cut(s)	989
Fnu4HI	GCNGC	6 cut(s)	401, 470, 780, 974, 1457, 1485
FokI	GGATG	5 cut(s)	500, 557, 1411, 1458, 1712
Fsp4HI	GCNGC	6 cut(s)	401, 470, 780, 974, 1457, 1485
FspBI	CTAG	5 cut(s)	66, 279, 404, 744, 1143
FspI	TGCGCA	1 cut(s)	352
GlaI	GCGC	1 cut(s)	352
GluI	GCNGC	6 cut(s)	401, 470, 780, 974, 1457, 1485
GsuI	CTGGAG	2 cut(s)	132, 1587
HaeIII	GGCC	3 cut(s)	5, 1512, 1669
HapII	CCGG	3 cut(s)	131, 1094, 1591
HhaI	GCGC	1 cut(s)	353
Hin6I	GCGC	1 cut(s)	351
HinP1I	GCGC	1 cut(s)	351
HincII	GTYRAC	1 cut(s)	1888
HindII	GTYRAC	1 cut(s)	1888
HindIII	AAGCTT	1 cut(s)	536
HpaII	CCGG	3 cut(s)	131, 1094, 1591
HphI	GGTGA	9 cut(s)	120, 323, 1034, 1045, 1083, 1513, 1547, 1745, 1840
Hpy166II	GTNNAC	5 cut(s)	770, 990, 1301, 1831, 1888
Hpy188I	TCNGA	8 cut(s)	122, 139, 304, 948, 1039, 1192, 1395, 1900
Hpy188III	TCNNGA	9 cut(s)	99, 149, 542, 572, 636, 939, 1205, 1428, 1493
Hpy8I	GTNNAC	5 cut(s)	770, 990, 1301, 1831, 1888
Hpy99I	CGWCG	2 cut(s)	363, 498
HpyAV	CCTTC	3 cut(s)	577, 822, 1356
HpyCH4III	ACNGT	4 cut(s)	843, 1465, 1718, 1881
HpyCH4IV	ACGT	3 cut(s)	361, 649, 1357
HpyF10VI	GCNNNNNNNGC	6 cut(s)	197, 234, 397, 488, 1411, 1675
HpyF3I	CTNAG	8 cut(s)	138, 945, 1014, 1038, 1233, 1239, 1261, 1809
HpySE526I	ACGT	3 cut(s)	361, 649, 1357
HspAI	GCGC	1 cut(s)	351
Ksp22I	TGATCA	1 cut(s)	825
LguI	GCTCTTC	1 cut(s)	1395
LmnI	GCTCC	3 cut(s)	242, 1156, 1262
Lsp1109I	GCAGC	6 cut(s)	412, 481, 766, 985, 1468, 1471
LweI	GCATC	6 cut(s)	224, 387, 478, 860, 1436, 1471
MaeI	CTAG	5 cut(s)	66, 279, 404, 744, 1143
MaeII	ACGT	3 cut(s)	361, 649, 1357
MaeIII	GTNAC	7 cut(s)	338, 805, 1022, 1031, 1341, 1646, 1751
MfeI	CAATTG	2 cut(s)	392, 708
MflI	RGATCY	3 cut(s)	174, 751, 941
MhlI	GDGCHC	1 cut(s)	1185
MlyI	GAGTC	7 cut(s)	56, 117, 314, 641, 1430, 1546, 1883
Mph1103I	ATGCAT	1 cut(s)	853
MroXI	GAANNNNTTC	1 cut(s)	1931
MseI	TTAA	5 cut(s)	561, 624, 1070, 1197, 1954
MslI	CAYNNNNRTG	2 cut(s)	1530, 1644
MspA1I	CMGCKG	2 cut(s)	779, 857
MspI	CCGG	3 cut(s)	131, 1094, 1591
MspR9I	CCNGG	5 cut(s)	1085, 1514, 1549, 1591, 1592
MunI	CAATTG	2 cut(s)	392, 708
Mva1269I	GAATGC	1 cut(s)	1748
MvaI	CCWGG	3 cut(s)	1085, 1514, 1549
MwoI	GCNNNNNNNGC	6 cut(s)	197, 234, 397, 488, 1411, 1675
NciI	CCSGG	2 cut(s)	1591, 1592
NlaIV	GGNNCC	4 cut(s)	276, 618, 1158, 1258
NmuCI	GTSAC	5 cut(s)	338, 1022, 1031, 1646, 1751
NsbI	TGCGCA	1 cut(s)	352
NsiI	ATGCAT	1 cut(s)	853
NspV	TTCGAA	1 cut(s)	164
PagI	TCATGA	2 cut(s)	571, 1492
PciSI	GCTCTTC	1 cut(s)	1395
PctI	GAATGC	1 cut(s)	1748
PdmI	GAANNNNTTC	1 cut(s)	1931
PfeI	GAWTC	7 cut(s)	305, 1088, 1105, 1120, 1538, 1586, 1932
PflMI	CCANNNNNTGG	2 cut(s)	155, 626
PinAI	ACCGGT	1 cut(s)	1093
PkrI	GCNGC	6 cut(s)	402, 471, 781, 975, 1458, 1486
PleI	GAGTC	7 cut(s)	55, 117, 314, 640, 1429, 1546, 1883
PmaCI	CACGTG	1 cut(s)	1358
PmlI	CACGTG	1 cut(s)	1358
PpsI	GAGTC	7 cut(s)	55, 117, 314, 640, 1429, 1546, 1883
Ppu21I	YACGTR	2 cut(s)	650, 1358
PpuMI	RGGWCCY	1 cut(s)	274
PshAI	GACNNNNGTC	2 cut(s)	279, 1029
PshBI	ATTAAT	1 cut(s)	624
PsiI	TTATAA	1 cut(s)	534
Psp5II	RGGWCCY	1 cut(s)	274
Psp6I	CCWGG	3 cut(s)	1083, 1512, 1547
PspCI	CACGTG	1 cut(s)	1358
PspEI	GGTNACC	1 cut(s)	1751
PspGI	CCWGG	3 cut(s)	1083, 1512, 1547
PspN4I	GGNNCC	4 cut(s)	276, 618, 1158, 1258
PspPI	GGNCC	4 cut(s)	274, 617, 1301, 1667
PspPPI	RGGWCCY	1 cut(s)	274
PsrI	GAACNNNNNNTAC	2 cut(s)	1697, 1729
PstI	CTGCAG	3 cut(s)	975, 1103, 1458
PsuI	RGATCY	3 cut(s)	174, 751, 941
PvuII	CAGCTG	2 cut(s)	779, 857
RsaI	GTAC	7 cut(s)	298, 507, 648, 687, 887, 931, 1715
RsaNI	GTAC	7 cut(s)	297, 506, 647, 686, 886, 930, 1714
RseI	CAYNNNNRTG	2 cut(s)	1530, 1644
SapI	GCTCTTC	1 cut(s)	1395
SaqAI	TTAA	5 cut(s)	561, 624, 1070, 1197, 1954
SatI	GCNGC	6 cut(s)	401, 470, 780, 974, 1457, 1485
Sau96I	GGNCC	4 cut(s)	274, 617, 1301, 1667
ScaI	AGTACT	1 cut(s)	1715
SchI	GAGTC	7 cut(s)	56, 117, 314, 641, 1430, 1546, 1883
ScrFI	CCNGG	5 cut(s)	1085, 1514, 1549, 1591, 1592
SduI	GDGCHC	1 cut(s)	1185
SfaNI	GCATC	6 cut(s)	224, 387, 478, 860, 1436, 1471
SfcI	CTRYAG	4 cut(s)	971, 1099, 1454, 1936
SfuI	TTCGAA	1 cut(s)	164
SinI	GGWCC	3 cut(s)	274, 617, 1301
SmaI	CCCGGG	1 cut(s)	1592
SmiMI	CAYNNNNRTG	2 cut(s)	1530, 1644
SmlI	CTYRAG	2 cut(s)	526, 602
SmoI	CTYRAG	2 cut(s)	526, 602
SsiI	CCGC	2 cut(s)	1412, 1912
SspMI	CTAG	5 cut(s)	66, 279, 404, 744, 1143
StyD4I	CCNGG	5 cut(s)	1083, 1512, 1547, 1589, 1590
TaaI	ACNGT	4 cut(s)	843, 1465, 1718, 1881
TaiI	ACGT	3 cut(s)	364, 652, 1360
TaqI	TCGA	3 cut(s)	164, 358, 837
TatI	WGTACW	4 cut(s)	296, 505, 685, 1713
TfiI	GAWTC	7 cut(s)	305, 1088, 1105, 1120, 1538, 1586, 1932
Tru1I	TTAA	5 cut(s)	561, 624, 1070, 1197, 1954
Tru9I	TTAA	5 cut(s)	561, 624, 1070, 1197, 1954
TscAI	CASTG	1 cut(s)	1662
TseFI	GTSAC	5 cut(s)	338, 1022, 1031, 1646, 1751
TseI	GCWGC	6 cut(s)	400, 469, 779, 973, 1456, 1484
Tsp45I	GTSAC	5 cut(s)	338, 1022, 1031, 1646, 1751
TspDTI	ATGAA	8 cut(s)	417, 560, 738, 804, 1064, 1413, 1449, 1644
TspGWI	ACGGA	2 cut(s)	1939, 1944
TspMI	CCCGGG	1 cut(s)	1590
TspRI	CASTG	1 cut(s)	1662
Van91I	CCANNNNNTGG	2 cut(s)	155, 626
VpaK11BI	GGWCC	3 cut(s)	274, 617, 1301
VspI	ATTAAT	1 cut(s)	624
XagI	CCTNNNNNAGG	1 cut(s)	1760
XapI	RAATTY	5 cut(s)	456, 954, 1138, 1193, 1766
XmaI	CCCGGG	1 cut(s)	1590
XmiI	GTMKAC	1 cut(s)	989
XmnI	GAANNNNTTC	1 cut(s)	1931
XspI	CTAG	5 cut(s)	66, 279, 404, 744, 1143
ZrmI	AGTACT	1 cut(s)	1715
Zsp2I	ATGCAT	1 cut(s)	853

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.