Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0005283

Physical Location & Seq

Genomic Coordinates Forward (+)

4395024 .. 4399888

Gene Structure 4865 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000016165

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2319 bp

ATGGATTCGGAAGATAAGTTTCTAGCTAAAGAGTTCCTGAGGAAGGACAGATGGAATCATGGAAGTGCTGCTGATAGGTTGTTGAGTAAACTGATTAGGAAGGCATTGAAGGTAGAAAGAAGGATAAAGCAGAATTTGATTGGGTTGCGCCTCACCATTGATCTGAATTGCCCCTTTTGTCTCACTCTTTCTGGAGTTCAAAGTCTCTCTTCCAGTGTGCAAAGCACTCCCGAGAAGAATGGGCATTCAGATGATGCTTCAAGAAGTCCAGAGCTCCTTCAACAGTTTCTGAAATCTGGTCCCAGGAAGGAACTTCTTCGGGCGTGTGTTGACAAGGACAAGAAAAATTTGACTTCCTCAAAAAACAAGATGGCAGAACTTTTGAAGACTACGAACAAGACAAATAAGAAGCAGGAGTCAAAAAAAGCTTCTTCTAGTCCAAATAATCATCCTCCTAAAAAGCAATCCAGAAAGGGGGAAAATCCCATCCGACTCTCACCGGCTTCTGAGCAGTCTCCAGATTTTGGATGTTCGAACTCATGGATTTGTAAAAACTCTGCTTGTAGAGCTGTTCTATCCATAGACAACACATTCTGCAAGAGATGCTCCTGCTGTATTTGTCATTTGTTTGATGACAACAAGGACCCAAGTCTTTGGTTAGTATGCACATCTGAATCTGGTGAGGGAGATTCCTGTGGGTTATCTTGTCACATTGACTGCGCGCTTAGACATGAAAAGGTGGGAGTTGTTGATCTTGGGCAATTGATGCAGCTAGATGGTAGTTATTGTTGTGCTTCATGTGGTAAAGTTTCTGGGATACTTGGGATTTGGAAGAAGCAGCTACTTGTAGCAAAGGATGCTCGACGTGTTGATGTTCTTTGGGACAGGATATGCTTGGGTTATAGGCTTCTGGATGGGACTTCAAGGTTTAAAGAACTTCATGATATTGTGAAGGAAGCGAAGACTAAACTCGAGACAGAACTAGGTCCAATTAATGGAGATTCAGGAACAATGGTACGTGGGATAGTCAGCAGACTATCTATCGCTGGTGATGTGCTAAAACTCTGCTCTCTTGCAATTGAGAAAGCTGATGAATGGTTGGCCAATGTTTCTAGTGCAGACCCAAACAGAGAGGGTTCACTTCCAGCTGCCTGCAAGTTTCTCTTTGAGGAAGTAACACCTTCATCTGTTGTGATTATATTGATCGAACTGTCTAATGCGTCATCTGATGACATCAAGGGATACAAGCTCTGGTATTACAAGAGCAGAGAAGAATCACACACAAAAGAGCCTACTTGTACCTTTTCAAGATCTCAGAGAAGAATTTTGATCTCCAATCTGCAGCCTTGCACAGAGTATACATTTAGGATAATATCTTATACTGAGGCTGGTGACTTGGGTCACTCTGAGGCAAAGTGTTTCACCAAAAGTGTTGAGATAATTCACAAAAACCTGGATTCACCAGTCTGCAGGAATCATAAGAAAGAGAATCCTGTCATTGAGGCAAATTCTAGTGCCATGAGGGAGTCTGAAACTACAACAGCAGTTGTGCCTTCTTCCGAATTTAAAGTTCGTGATCTTGGAAAGATACTTCGTCTGGCTCAGGCTCAACAGAAAGGCTCCTTGGAGGGCTTTTGTAGTGCCAACAAAGAAAAATGTTGTGGACCAAGCAACCCGATAAAAACTGAAACTCTACTAGAAGAGTTGCCTTCTGTTCCTCGGGGGCTTGACTTAAATGTTCTTTCAATGCCCGATCTGAATGAAGAGCTAACCCCGCCCTTTGAGTCCTCCAGAGATGAAGATAATGGATGCACTTTGCAGCAGGCTGTGGAGGCAGATGATGATGCTGCTTCTCATGACATGGTGAAGAACGGCCTAGCAAGATCACATGGTAGTGGTGATTCACAGACCTGGACTCATGGAATTACTGGAGATGTCCCTGCTGTTGATTCTCGGGCAGAAATTTGCAGGAAGAGGAAAGGAAACTCAAATGAAGAGACCCATGATTGTGACAGCACCCTGATAAATGGGCCACCATTGCAAAATGGTTCTTGTTGCTTGGACGAGAACTTTGAGTACTGTGTGAAAATAATCAGGTGGCTGGAATGCGAGGGTCACCTTACGGAGGAATTCAGATTGAAGTTGCTAACATGGTTCAGTTTGAGATCAACTGAGCAAGAGCGTAGGGTGGTCAACACCTTTATTCAAACTATGATTGATGATCCAAGTAGCTTGGCAGGTCAGTTAGTTGACTCCTTTGCAGATATCATATCCCGCAAGAGGCAACGGAACGGATTCTGCAGTAAGCTGTGGCATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001666 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005677 GO:0006950 GO:0008150 GO:0009266 GO:0009409 GO:0009628 GO:0009892 GO:0009893 GO:0009987 GO:0010048 GO:0010468 GO:0010604 GO:0010605 GO:0010629 GO:0010638 GO:0016604 GO:0016607 GO:0017053 GO:0019222 GO:0031056 GO:0031058 GO:0031060 GO:0031062 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0031974 GO:0031981 GO:0032268 GO:0032270 GO:0032991 GO:0033043 GO:0033044 GO:0033554 GO:0036293 GO:0040029 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045814 GO:0048518 GO:0048519 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0051569 GO:0051571 GO:0051716 GO:0060255 GO:0061085 GO:0061087 GO:0065007 GO:0070013 GO:0070417 GO:0070482 GO:0080090 GO:0090568 GO:1902275 GO:1905269 GO:2001252

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PHD_Oberon fn3

Protein Analysis

773

Amino Acids

85.91

Weight (kDa)

7.39

Isoelectric Point (pI)

57.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PHD_Oberon	PF07227	183 - 301	7.5e-33	PHD - plant homeodomain finger protein
Fn3_VIN3	PF23376	388 - 475	3.6e-32	VIN3-like, fibronectin type-III domain
fn3	PF00041	389 - 469	1e-06	Fibronectin type III domain
VIN3_C	PF23380	688 - 761	1.6e-39	VIN3-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0005283)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G18870 AT3G24440 AT3G24440
fragaria_vesca	FvH4_1g05280
malus_domestica	MD02G1056200.v1.1 MD15G1189100.v1.1
pyrus_communis	pycom02g04520 pycom02g04530 pycom15g16940 pycom15g16950
rosa_chinensis	RchiOBHm_Chr2g0091001
rosa_laevigata	RLG00000015776 RLG00000016165
rosa_multiflora	Rmu_sc0003305.1_g000004 Rmu_sc0004626.1_g000008
rosa_roxburghii	Rroxscaffold_2G00150700 Rroxscaffold_2G00154300 Rroxscaffold_2G00154540
rosa_rugosa	Rorug01G0468700 Rorug01G0468800 Rorug02G0011400
rosa_samantha	Rh2BG020600 Rh2BG056000 Rh2CG020200 Rh2CG020500 Rh2CG021200 Rh2CG058300 Rh2DG057400
rosa_wichuraiana	Rw2G005160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	2228
AccB7I	CCANNNNNTGG	2 cut(s)	524, 995
AccI	GTMKAC	1 cut(s)	1358
AccII	CGCG	1 cut(s)	722
AciI	CCGC	2 cut(s)	1775, 2275
AclWI	GGATC	1 cut(s)	2216
AcoI	YGGCCR	1 cut(s)	1101
AcsI	RAATTY	7 cut(s)	133, 346, 1323, 1507, 1562, 1962, 2129
AfaI	GTAC	3 cut(s)	1017, 1300, 2078
AfiI	CCNNNNNNNGG	6 cut(s)	43, 474, 524, 995, 2125, 2280
AflIII	ACRYGT	1 cut(s)	865
AjiI	CACGTC	1 cut(s)	866
AjnI	CCWGG	3 cut(s)	302, 1452, 1910
AjuI	GAANNNNNNNTTGG	2 cut(s)	1607, 1639
Alw21I	GWGCWC	1 cut(s)	276
Alw26I	GTCTC	5 cut(s)	185, 209, 519, 968, 1991
AlwI	GGATC	1 cut(s)	2216
AlwNI	CAGNNNCTG	1 cut(s)	289
Ama87I	CYCGRG	4 cut(s)	230, 971, 1719, 1953
AoxI	GGCC	3 cut(s)	1101, 1873, 2030
ApeKI	GCWGC	7 cut(s)	68, 769, 838, 1148, 1342, 1819, 1847
ApoI	RAATTY	7 cut(s)	133, 346, 1323, 1507, 1562, 1962, 2129
ArsI	GACNNNNNNTTYG	2 cut(s)	2054, 2086
AseI	ATTAAT	1 cut(s)	993
Asp700I	GAANNNNTTC	2 cut(s)	315, 2294
AspLEI	GCGC	3 cut(s)	150, 722, 724
AspS9I	GGNCC	5 cut(s)	299, 643, 986, 1664, 2030
AsuII	TTCGAA	1 cut(s)	533
AvaI	CYCGRG	4 cut(s)	230, 971, 1719, 1953
AvaII	GGWCC	4 cut(s)	299, 643, 986, 1664
AxyI	CCTNAGG	1 cut(s)	38
BalI	TGGCCA	1 cut(s)	1103
BanII	GRGCYC	1 cut(s)	276
BbsI	GAAGAC	2 cut(s)	392, 968
Bbv12I	GWGCWC	1 cut(s)	276
BbvI	GCAGC	7 cut(s)	55, 781, 850, 1135, 1354, 1831, 1834
BccI	CCATC	5 cut(s)	45, 364, 494, 770, 908
BceAI	ACGGC	1 cut(s)	1888
BciT130I	CCWGG	3 cut(s)	304, 1454, 1912
BciVI	GTATCC	2 cut(s)	810, 1235
BcoDI	GTCTC	5 cut(s)	185, 209, 519, 968, 1991
BfaI	CTAG	8 cut(s)	23, 435, 773, 983, 1113, 1512, 1697, 1877
BfmI	CTRYAG	3 cut(s)	1340, 1468, 2299
BfuAI	ACCTGC	1 cut(s)	2228
BfuI	GTATCC	2 cut(s)	810, 1235
BglII	AGATCT	1 cut(s)	1310
BisI	GCNGC	7 cut(s)	69, 770, 839, 1149, 1343, 1820, 1848
BlsI	GCNGC	7 cut(s)	70, 771, 840, 1150, 1344, 1821, 1849
BmcAI	AGTACT	1 cut(s)	2078
Bme1390I	CCNGG	3 cut(s)	304, 1454, 1912
Bme18I	GGWCC	4 cut(s)	299, 643, 986, 1664
BmeT110I	CYCGRG	4 cut(s)	230, 971, 1719, 1953
BmgBI	CACGTC	1 cut(s)	866
BmgT120I	GGNCC	5 cut(s)	299, 643, 986, 1664, 2030
BmiI	GGNNCC	3 cut(s)	301, 645, 1621
BmrFI	CCNGG	3 cut(s)	304, 1454, 1912
BmsI	GCATC	6 cut(s)	244, 593, 756, 847, 1799, 1834
BoxI	GACNNNNGTC	2 cut(s)	648, 1398
BpiI	GAAGAC	2 cut(s)	392, 968
BpmI	CTGGAG	4 cut(s)	213, 501, 1774, 1950
Bpu10I	CCTNAGC	1 cut(s)	1602
Bpu14I	TTCGAA	1 cut(s)	533
BsaAI	YACGTR	1 cut(s)	1019
BsaI	GGTCTC	1 cut(s)	1991
BsaJI	CCNNGG	3 cut(s)	302, 1623, 1718
Bsc4I	CCNNNNNNNGG	6 cut(s)	43, 474, 524, 995, 2125, 2280
Bse118I	RCCGGY	1 cut(s)	499
Bse1I	ACTGG	3 cut(s)	213, 1463, 1933
Bse21I	CCTNAGG	1 cut(s)	38
Bse3DI	GCAATG	1 cut(s)	2036
BseBI	CCWGG	3 cut(s)	304, 1454, 1912
BseDI	CCNNGG	3 cut(s)	302, 1623, 1718
BseGI	GGATG	6 cut(s)	448, 486, 533, 862, 919, 1814
BseLI	CCNNNNNNNGG	6 cut(s)	43, 474, 524, 995, 2125, 2280
BseMI	GCAATG	1 cut(s)	2036
BseMII	CTCAG	7 cut(s)	29, 498, 1328, 1374, 1398, 1616, 2163
BseNI	ACTGG	3 cut(s)	213, 1463, 1933
BsePI	GCGCGC	1 cut(s)	720
BseXI	GCAGC	7 cut(s)	55, 781, 850, 1135, 1354, 1831, 1834
BsgI	GTGCAG	1 cut(s)	1137
Bsh1236I	CGCG	1 cut(s)	722
BshFI	GGCC	3 cut(s)	1103, 1875, 2032
BsiHKAI	GWGCWC	1 cut(s)	276
BsiHKCI	CYCGRG	4 cut(s)	230, 971, 1719, 1953
BsiSI	CCGG	1 cut(s)	500
BslFI	GGGAC	4 cut(s)	285, 896, 931, 1922
BslI	CCNNNNNNNGG	6 cut(s)	43, 474, 524, 995, 2125, 2280
BsmAI	GTCTC	5 cut(s)	185, 209, 519, 968, 1991
BsmFI	GGGAC	4 cut(s)	285, 896, 931, 1922
BsmI	GAATGC	2 cut(s)	244, 2111
BsnI	GGCC	3 cut(s)	1103, 1875, 2032
Bso31I	GGTCTC	1 cut(s)	1991
BsoBI	CYCGRG	4 cut(s)	230, 971, 1719, 1953
Bsp119I	TTCGAA	1 cut(s)	533
Bsp1286I	GDGCHC	1 cut(s)	276
BspACI	CCGC	2 cut(s)	1775, 2275
BspANI	GGCC	3 cut(s)	1103, 1875, 2032
BspCNI	CTCAG	7 cut(s)	30, 499, 1327, 1375, 1399, 1615, 2164
BspFNI	CGCG	1 cut(s)	722
BspHI	TCATGA	2 cut(s)	940, 1855
BspLI	GGNNCC	3 cut(s)	301, 645, 1621
BspMAI	CTGCAG	3 cut(s)	1344, 1472, 2303
BspMI	ACCTGC	1 cut(s)	2228
BspPI	GGATC	1 cut(s)	2216
BspQI	GCTCTTC	1 cut(s)	1758
BspT104I	TTCGAA	1 cut(s)	533
BspTNI	GGTCTC	1 cut(s)	1991
BsrDI	GCAATG	1 cut(s)	2036
BsrFI	RCCGGY	1 cut(s)	499
BsrI	ACTGG	3 cut(s)	213, 1463, 1933
BssAI	RCCGGY	1 cut(s)	499
BssECI	CCNNGG	3 cut(s)	302, 1623, 1718
BssHII	GCGCGC	1 cut(s)	720
BssNAI	GTATAC	1 cut(s)	1359
BssT1I	CCWWGG	1 cut(s)	1623
Bst1107I	GTATAC	1 cut(s)	1359
Bst2UI	CCWGG	3 cut(s)	304, 1454, 1912
Bst4CI	ACNGT	3 cut(s)	285, 1212, 2081
Bst6I	CTCTTC	5 cut(s)	214, 1695, 1758, 1967, 1989
BstAPI	GCANNNNNTGC	3 cut(s)	603, 766, 857
BstBAI	YACGTR	1 cut(s)	1019
BstBI	TTCGAA	1 cut(s)	533
BstC8I	GCNNGC	3 cut(s)	722, 1153, 1824
BstDEI	CTNAG	8 cut(s)	38, 507, 725, 1314, 1383, 1407, 1602, 2172
BstEII	GGTNACC	1 cut(s)	2114
BstENI	CCTNNNNNAGG	2 cut(s)	41, 2123
BstF5I	GGATG	6 cut(s)	448, 486, 533, 862, 919, 1814
BstFNI	CGCG	1 cut(s)	722
BstHHI	GCGC	3 cut(s)	150, 722, 724
BstMAI	GTCTC	5 cut(s)	185, 209, 519, 968, 1991
BstMWI	GCNNNNNNNGC	7 cut(s)	566, 603, 766, 857, 1774, 1832, 2038
BstNI	CCWGG	3 cut(s)	304, 1454, 1912
BstPAI	GACNNNNGTC	2 cut(s)	648, 1398
BstPI	GGTNACC	1 cut(s)	2114
BstSCI	CCNGG	3 cut(s)	302, 1452, 1910
BstSFI	CTRYAG	3 cut(s)	1340, 1468, 2299
BstUI	CGCG	1 cut(s)	722
BstV1I	GCAGC	7 cut(s)	55, 781, 850, 1135, 1354, 1831, 1834
BstV2I	GAAGAC	2 cut(s)	392, 968
BstX2I	RGATCY	1 cut(s)	1310
BstXI	CCANNNNNNTGG	1 cut(s)	654
BstYI	RGATCY	1 cut(s)	1310
BstZ17I	GTATAC	1 cut(s)	1359
Bsu36I	CCTNAGG	1 cut(s)	38
BsuI	GTATCC	2 cut(s)	810, 1235
BsuRI	GGCC	3 cut(s)	1103, 1875, 2032
BtrI	CACGTC	1 cut(s)	866
BtsCI	GGATG	6 cut(s)	448, 486, 533, 862, 919, 1814
BtsIMutI	CAGTG	1 cut(s)	220
BveI	ACCTGC	1 cut(s)	2228
Cac8I	GCNNGC	3 cut(s)	722, 1153, 1824
CaiI	CAGNNNCTG	1 cut(s)	289
CciI	TCATGA	2 cut(s)	940, 1855
CfoI	GCGC	3 cut(s)	150, 722, 724
Cfr10I	RCCGGY	1 cut(s)	499
Cfr13I	GGNCC	5 cut(s)	299, 643, 986, 1664, 2030
CseI	GACGC	1 cut(s)	1209
Csp6I	GTAC	3 cut(s)	1016, 1299, 2077
CviQI	GTAC	3 cut(s)	1016, 1299, 2077
DdeI	CTNAG	8 cut(s)	38, 507, 725, 1314, 1383, 1407, 1602, 2172
DraI	TTTAAA	2 cut(s)	931, 1567
EaeI	YGGCCR	1 cut(s)	1101
Eam1104I	CTCTTC	5 cut(s)	214, 1695, 1758, 1967, 1989
EarI	CTCTTC	5 cut(s)	214, 1695, 1758, 1967, 1989
Ecl136II	GAGCTC	1 cut(s)	274
Eco130I	CCWWGG	1 cut(s)	1623
Eco24I	GRGCYC	1 cut(s)	276
Eco31I	GGTCTC	1 cut(s)	1991
Eco32I	GATATC	1 cut(s)	2266
Eco47I	GGWCC	4 cut(s)	299, 643, 986, 1664
Eco53kI	GAGCTC	1 cut(s)	274
Eco81I	CCTNAGG	1 cut(s)	38
Eco88I	CYCGRG	4 cut(s)	230, 971, 1719, 1953
Eco91I	GGTNACC	1 cut(s)	2114
EcoICRI	GAGCTC	1 cut(s)	274
EcoNI	CCTNNNNNAGG	2 cut(s)	41, 2123
EcoO109I	RGGNCCY	1 cut(s)	643
EcoO65I	GGTNACC	1 cut(s)	2114
EcoRI	GAATTC	1 cut(s)	2129
EcoRII	CCWGG	3 cut(s)	302, 1452, 1910
EcoRV	GATATC	1 cut(s)	2266
EcoT14I	CCWWGG	1 cut(s)	1623
EcoT38I	GRGCYC	1 cut(s)	276
ErhI	CCWWGG	1 cut(s)	1623
FalI	AAGNNNNNCTT	4 cut(s)	193, 225, 1148, 1180
FaqI	GGGAC	4 cut(s)	285, 896, 931, 1922
FauI	CCCGC	2 cut(s)	1782, 2282
FblI	GTMKAC	1 cut(s)	1358
Fnu4HI	GCNGC	7 cut(s)	69, 770, 839, 1149, 1343, 1820, 1848
FokI	GGATG	6 cut(s)	435, 473, 540, 869, 926, 1821
FriOI	GRGCYC	1 cut(s)	276
Fsp4HI	GCNGC	7 cut(s)	69, 770, 839, 1149, 1343, 1820, 1848
FspBI	CTAG	8 cut(s)	23, 435, 773, 983, 1113, 1512, 1697, 1877
GlaI	GCGC	3 cut(s)	149, 721, 723
GluI	GCNGC	7 cut(s)	69, 770, 839, 1149, 1343, 1820, 1848
GsuI	CTGGAG	4 cut(s)	213, 501, 1774, 1950
HaeIII	GGCC	3 cut(s)	1103, 1875, 2032
HapII	CCGG	1 cut(s)	500
HgaI	GACGC	1 cut(s)	1209
HhaI	GCGC	3 cut(s)	150, 722, 724
Hin6I	GCGC	3 cut(s)	148, 720, 722
HinP1I	GCGC	3 cut(s)	148, 720, 722
HincII	GTYRAC	3 cut(s)	331, 2194, 2251
HindII	GTYRAC	3 cut(s)	331, 2194, 2251
HindIII	AAGCTT	1 cut(s)	426
HpaII	CCGG	1 cut(s)	500
Hpy166II	GTNNAC	7 cut(s)	89, 331, 1139, 1359, 1664, 2194, 2251
Hpy8I	GTNNAC	7 cut(s)	89, 331, 1139, 1359, 1664, 2194, 2251
Hpy99I	CGWCG	1 cut(s)	867
HpyCH4III	ACNGT	3 cut(s)	285, 1212, 2081
HpyCH4IV	ACGT	2 cut(s)	865, 1018
HpyF10VI	GCNNNNNNNGC	7 cut(s)	566, 603, 766, 857, 1774, 1832, 2038
HpyF3I	CTNAG	8 cut(s)	38, 507, 725, 1314, 1383, 1407, 1602, 2172
HpySE526I	ACGT	2 cut(s)	865, 1018
HspAI	GCGC	3 cut(s)	148, 720, 722
LguI	GCTCTTC	1 cut(s)	1758
LmnI	GCTCC	3 cut(s)	279, 611, 1625
Lsp1109I	GCAGC	7 cut(s)	55, 781, 850, 1135, 1354, 1831, 1834
LweI	GCATC	6 cut(s)	244, 593, 756, 847, 1799, 1834
MaeI	CTAG	8 cut(s)	23, 435, 773, 983, 1113, 1512, 1697, 1877
MaeII	ACGT	2 cut(s)	865, 1018
MaeIII	GTNAC	6 cut(s)	707, 1174, 1391, 1400, 2009, 2114
MfeI	CAATTG	2 cut(s)	761, 1077
MflI	RGATCY	1 cut(s)	1310
MhlI	GDGCHC	1 cut(s)	276
MlsI	TGGCCA	1 cut(s)	1103
MluNI	TGGCCA	1 cut(s)	1103
MlyI	GAGTC	6 cut(s)	425, 486, 1535, 1793, 1909, 2246
MmeI	TCCRAC	1 cut(s)	514
Mox20I	TGGCCA	1 cut(s)	1103
MroXI	GAANNNNTTC	2 cut(s)	315, 2294
MscI	TGGCCA	1 cut(s)	1103
MseI	TTAA	5 cut(s)	930, 993, 1566, 1733, 2317
MslI	CAYNNNNRTG	4 cut(s)	63, 249, 1893, 2007
Msp20I	TGGCCA	1 cut(s)	1103
MspA1I	CMGCKG	1 cut(s)	1148
MspI	CCGG	1 cut(s)	500
MspR9I	CCNGG	3 cut(s)	304, 1454, 1912
MunI	CAATTG	2 cut(s)	761, 1077
Mva1269I	GAATGC	2 cut(s)	244, 2111
MvaI	CCWGG	3 cut(s)	304, 1454, 1912
MvnI	CGCG	1 cut(s)	722
MwoI	GCNNNNNNNGC	7 cut(s)	566, 603, 766, 857, 1774, 1832, 2038
NlaIV	GGNNCC	3 cut(s)	301, 645, 1621
NmuCI	GTSAC	5 cut(s)	707, 1391, 1400, 2009, 2114
NspV	TTCGAA	1 cut(s)	533
PaeR7I	CTCGAG	1 cut(s)	971
PagI	TCATGA	2 cut(s)	940, 1855
PauI	GCGCGC	1 cut(s)	720
PciSI	GCTCTTC	1 cut(s)	1758
PctI	GAATGC	2 cut(s)	244, 2111
PdmI	GAANNNNTTC	2 cut(s)	315, 2294
PflMI	CCANNNNNTGG	2 cut(s)	524, 995
PkrI	GCNGC	7 cut(s)	70, 771, 840, 1150, 1344, 1821, 1849
PleI	GAGTC	6 cut(s)	424, 486, 1534, 1792, 1909, 2246
PpsI	GAGTC	6 cut(s)	424, 486, 1534, 1792, 1909, 2246
Ppu21I	YACGTR	1 cut(s)	1019
PpuMI	RGGWCCY	1 cut(s)	643
PshAI	GACNNNNGTC	2 cut(s)	648, 1398
PshBI	ATTAAT	1 cut(s)	993
Psp124BI	GAGCTC	1 cut(s)	276
Psp5II	RGGWCCY	1 cut(s)	643
Psp6I	CCWGG	3 cut(s)	302, 1452, 1910
PspEI	GGTNACC	1 cut(s)	2114
PspGI	CCWGG	3 cut(s)	302, 1452, 1910
PspN4I	GGNNCC	3 cut(s)	301, 645, 1621
PspPI	GGNCC	5 cut(s)	299, 643, 986, 1664, 2030
PspPPI	RGGWCCY	1 cut(s)	643
PsrI	GAACNNNNNNTAC	2 cut(s)	2060, 2092
PstI	CTGCAG	3 cut(s)	1344, 1472, 2303
PstNI	CAGNNNCTG	1 cut(s)	289
PsuI	RGATCY	1 cut(s)	1310
PteI	GCGCGC	1 cut(s)	720
PvuII	CAGCTG	1 cut(s)	1148
RsaI	GTAC	3 cut(s)	1017, 1300, 2078
RsaNI	GTAC	3 cut(s)	1016, 1299, 2077
RseI	CAYNNNNRTG	4 cut(s)	63, 249, 1893, 2007
SacI	GAGCTC	1 cut(s)	276
SapI	GCTCTTC	1 cut(s)	1758
SaqAI	TTAA	5 cut(s)	930, 993, 1566, 1733, 2317
SatI	GCNGC	7 cut(s)	69, 770, 839, 1149, 1343, 1820, 1848
Sau96I	GGNCC	5 cut(s)	299, 643, 986, 1664, 2030
ScaI	AGTACT	1 cut(s)	2078
SchI	GAGTC	6 cut(s)	425, 486, 1535, 1793, 1909, 2246
ScrFI	CCNGG	3 cut(s)	304, 1454, 1912
SduI	GDGCHC	1 cut(s)	276
SfaNI	GCATC	6 cut(s)	244, 593, 756, 847, 1799, 1834
SfcI	CTRYAG	3 cut(s)	1340, 1468, 2299
Sfr274I	CTCGAG	1 cut(s)	971
SfuI	TTCGAA	1 cut(s)	533
SinI	GGWCC	4 cut(s)	299, 643, 986, 1664
SlaI	CTCGAG	1 cut(s)	971
SmiMI	CAYNNNNRTG	4 cut(s)	63, 249, 1893, 2007
SmlI	CTYRAG	1 cut(s)	971
SmoI	CTYRAG	1 cut(s)	971
SsiI	CCGC	2 cut(s)	1775, 2275
SspMI	CTAG	8 cut(s)	23, 435, 773, 983, 1113, 1512, 1697, 1877
SstI	GAGCTC	1 cut(s)	276
StyD4I	CCNGG	3 cut(s)	302, 1452, 1910
StyI	CCWWGG	1 cut(s)	1623
TaaI	ACNGT	3 cut(s)	285, 1212, 2081
TaiI	ACGT	2 cut(s)	868, 1021
TaqI	TCGA	4 cut(s)	533, 862, 972, 1206
TatI	WGTACW	1 cut(s)	2076
Tru1I	TTAA	5 cut(s)	930, 993, 1566, 1733, 2317
Tru9I	TTAA	5 cut(s)	930, 993, 1566, 1733, 2317
TscAI	CASTG	1 cut(s)	220
TseFI	GTSAC	5 cut(s)	707, 1391, 1400, 2009, 2114
TseI	GCWGC	7 cut(s)	68, 769, 838, 1148, 1342, 1819, 1847
Tsp45I	GTSAC	5 cut(s)	707, 1391, 1400, 2009, 2114
TspDTI	ATGAA	8 cut(s)	747, 786, 929, 1107, 1173, 1776, 1812, 2007
TspGWI	ACGGA	3 cut(s)	2138, 2302, 2307
TspRI	CASTG	1 cut(s)	220
Van91I	CCANNNNNTGG	2 cut(s)	524, 995
VpaK11BI	GGWCC	4 cut(s)	299, 643, 986, 1664
VspI	ATTAAT	1 cut(s)	993
XagI	CCTNNNNNAGG	2 cut(s)	41, 2123
XapI	RAATTY	7 cut(s)	133, 346, 1323, 1507, 1562, 1962, 2129
XhoI	CTCGAG	1 cut(s)	971
XmiI	GTMKAC	1 cut(s)	1358
XmnI	GAANNNNTTC	2 cut(s)	315, 2294
XspI	CTAG	8 cut(s)	23, 435, 773, 983, 1113, 1512, 1697, 1877
ZrmI	AGTACT	1 cut(s)	2078

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.