Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0005283

Physical Location & Seq

Genomic Coordinates Reverse (-)

4816089 .. 4820048

Gene Structure 3960 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G005160.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2064 bp

ATGGACTGTCCTCCAAAAATTCAAAGTCTCTCTTCCAGTGTGCAAAGCACTCCTGAGAAGAATGGGCATTCAGATGATGCTTCAAGAAGTCCAGAGCTCCTTCAACAGTTTCTGAAATCTGGTCCCAGGAAGGAACTTCTTCGGGCATGTGTTGACAAGGACAAGAAAAATTTGACTTCCTCAAAAAACAAGATGGCCGAACTTTTGAAGACTACTAACAAGACAAATAAGAAGCAGGAGTCAAAAAAAGCTTCTTCTAGTCCAAATAATCATCCTCCTAAAAAGCAATCCAGAAAGGGGGAAAATCCCATCCGACTATCACCGACATCTGAGCAGTCTCCAGATTTTGGATGTTCGAACTCATGGATCTGTAAAAACTCTGCTTGTAGAGCTGTTCTATCCATAGACAACACATTCTGCAAGAGATGCTCCTGCTGTATTTGTCATTTGTTTGATGACAACAAGGACCCAAGTCTTTGGTTAGTATGCACATCTGAATCTGGTGAGGGAGATTCCTGTGGGTTATCTTGTCACATTGACTGTGCGCTTAGACGTGAAAAGGTGGGAGTTGTTGATCTTGGGCAATTGATGCAGCTAGATGGTAGTTATTGTTGTGCTTCATGTGGTAAAGTTTCTGGGATACTTGGGATGCTCGACGTTGATGTTCTTTGGGACAGGATATGCTTGAGTTATAGGCTTCTGGATGGGACTTCAAGGTTTAAAGAACTTCATGATATTGTGAAGGAAGCGAAGACTAAACTCGAGACTGAACTGGGTCCAATTAATGGAGATTCAGGAACAATGGTACGTGGGATAGTCAGCAGACTATCTATCGCTGGTGATGTGCTAAAACTCTGCTCTCTTGCAATTGAGAAAGCTGATGAATGGTTGGCCAATGTTTCTAGTGCAGACCCAAACAGAGAGGGTTCACTTCCAGCTGCCTGCAAGTTTCTCTTTGAGGAAGTAACACCTTCATCTGTTGTGATTATATTGATCGAACTGTCTAATGCGTCATCTGATGACATCAAGGGATACAAGCTCTGGTATTACAAGAGCAGAGAAGAATCACACACAAAAGAGCCTACTTGTACCTTTTCAAGATCTCAGAGAAGAATTTTGATCTCTAATCTGCAGCCTTGCACAGAGTATACATTTAGGATAATATCTTATACTGAGGCTGGTGACTTGGGTCACTCTGAGGCAAAGTGTTTCACCAAAAGTGTTGAGATAATTCACAAAAACCCGGATTCACCAGTCTGCAGGAATCATAAGAAAGAGAATCCTGTCATTGAGGCAAATTCTAGTGCCATGAGGGAGTCTGAAACTACAACAGCAGTTGTGCCTTCTTCTGAATTTAAAGTTCGTGATCTTGGAAAGATACTTCGTCTGGCTCAGGCTCAACAAAAGGCTCCTTGGAGGGCTTTTGTAGTGCCAACAAAGAAAAATGTTTTGCCTTCTGTTCCACGGGGGCTTGACTTAAATGTTCTTTCAATGCCCGATCTGAATGAAGAGCTAACCCCGCCCTTTGAGTCCTCCAGAGATGAAGATAATGGATGCACTTTGCAGCAGGCTGTGGAGGCAGATGATGATGCTGCTTCTCATGACATGGTGAAGAACGGCCTAGCAAGATCACATGGTAGTGGTGATTCACAGACCTGGACTCATGGGATTACTGGAGATGTCCCTGCTGTTGATTCTCGGGCCGAAATTTGCAGGAAGAGGAAAGGAAACTCAAACGAAGAGACCCATGATTGTGACAGCACCCTGATAAATGGGCCACCATTGCAAAATGGTTCTTGTTGCTTGGACGAGAACTTTGAGTACTGTGTGAAAATAATCAGGTGGCTGGAATGCGAGGGTCACCTTACGGAGGAATTCAGATTGAAGTTGCTAACATGGTTCAGTTTGAGATCAACTGAGCAAGAGCGTAGGGTGGTCAACACCTTTATTCAAACTATGATTGATGATCCAAGTAGCTTGGCAGGACAGTTAGTTGACTCCTTTGCAGATATCATATCCCGCAAGAGGCAACGGAACGGGTTCTGCAGTAAGCTGTGGCATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001666 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005677 GO:0006950 GO:0008150 GO:0009266 GO:0009409 GO:0009628 GO:0009892 GO:0009893 GO:0009987 GO:0010048 GO:0010468 GO:0010604 GO:0010605 GO:0010629 GO:0010638 GO:0016604 GO:0016607 GO:0017053 GO:0019222 GO:0031056 GO:0031058 GO:0031060 GO:0031062 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0031974 GO:0031981 GO:0032268 GO:0032270 GO:0032991 GO:0033043 GO:0033044 GO:0033554 GO:0036293 GO:0040029 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045814 GO:0048518 GO:0048519 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0051569 GO:0051571 GO:0051716 GO:0060255 GO:0061085 GO:0061087 GO:0065007 GO:0070013 GO:0070417 GO:0070482 GO:0080090 GO:0090568 GO:1902275 GO:1905269 GO:2001252

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PHD_Oberon fn3

Protein Analysis

687

Amino Acids

76.3

Weight (kDa)

6.46

Isoelectric Point (pI)

58.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PHD_Oberon	PF07227	124 - 218	4.4e-26	PHD - plant homeodomain finger protein
Fn3_VIN3	PF23376	318 - 405	3.1e-32	VIN3-like, fibronectin type-III domain
fn3	PF00041	319 - 399	8.6e-07	Fibronectin type III domain
VIN3_C	PF23380	603 - 676	1.4e-39	VIN3-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005283)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G18870 AT3G24440 AT3G24440
fragaria_vesca	FvH4_1g05280
malus_domestica	MD02G1056200.v1.1 MD15G1189100.v1.1
pyrus_communis	pycom02g04520 pycom02g04530 pycom15g16940 pycom15g16950
rosa_chinensis	RchiOBHm_Chr2g0091001
rosa_laevigata	RLG00000015776 RLG00000016165
rosa_multiflora	Rmu_sc0003305.1_g000004 Rmu_sc0004626.1_g000008
rosa_roxburghii	Rroxscaffold_2G00150700 Rroxscaffold_2G00154300 Rroxscaffold_2G00154540
rosa_rugosa	Rorug01G0468700 Rorug01G0468800 Rorug02G0011400
rosa_samantha	Rh2BG020600 Rh2BG056000 Rh2CG020200 Rh2CG020500 Rh2CG021200 Rh2CG058300 Rh2DG057400
rosa_wichuraiana	Rw2G005160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	347, 785
AccI	GTMKAC	1 cut(s)	1148
AciI	CCGC	2 cut(s)	1520, 2020
AclWI	GGATC	2 cut(s)	374, 1961
AcoI	YGGCCR	2 cut(s)	195, 891
AcsI	RAATTY	7 cut(s)	18, 169, 1113, 1297, 1352, 1707, 1874
AfaI	GTAC	3 cut(s)	807, 1090, 1823
AfiI	CCNNNNNNNGG	5 cut(s)	297, 347, 785, 1870, 2025
AgsI	TTSAA	9 cut(s)	23, 84, 104, 208, 714, 1098, 1491, 1885, 1952
AjiI	CACGTC	1 cut(s)	554
AjnI	CCWGG	2 cut(s)	125, 1655
Alw21I	GWGCWC	1 cut(s)	99
Alw26I	GTCTC	4 cut(s)	32, 342, 758, 1736
AlwI	GGATC	2 cut(s)	374, 1961
AlwNI	CAGNNNCTG	1 cut(s)	112
Ama87I	CYCGRG	2 cut(s)	761, 1698
AoxI	GGCC	5 cut(s)	195, 891, 1618, 1701, 1775
ApeKI	GCWGC	5 cut(s)	592, 938, 1132, 1564, 1592
ApoI	RAATTY	7 cut(s)	18, 169, 1113, 1297, 1352, 1707, 1874
ArsI	GACNNNNNNTTYG	2 cut(s)	1799, 1831
AseI	ATTAAT	1 cut(s)	783
Asp700I	GAANNNNTTC	2 cut(s)	138, 2039
AspLEI	GCGC	1 cut(s)	547
AspS9I	GGNCC	5 cut(s)	122, 466, 776, 1701, 1775
AsuC2I	CCSGG	1 cut(s)	1244
AsuHPI	GGTGA	9 cut(s)	312, 515, 851, 1193, 1204, 1242, 1621, 1655, 1853
AsuII	TTCGAA	1 cut(s)	356
AvaI	CYCGRG	2 cut(s)	761, 1698
AvaII	GGWCC	3 cut(s)	122, 466, 776
BalI	TGGCCA	1 cut(s)	893
BanII	GRGCYC	1 cut(s)	99
BbsI	GAAGAC	2 cut(s)	215, 758
Bbv12I	GWGCWC	1 cut(s)	99
BbvI	GCAGC	5 cut(s)	604, 925, 1144, 1576, 1579
BccI	CCATC	4 cut(s)	187, 317, 593, 698
BceAI	ACGGC	1 cut(s)	1633
BciT130I	CCWGG	2 cut(s)	127, 1657
BciVI	GTATCC	2 cut(s)	633, 1025
BcnI	CCSGG	1 cut(s)	1244
BcoDI	GTCTC	4 cut(s)	32, 342, 758, 1736
BfaI	CTAG	5 cut(s)	258, 596, 903, 1302, 1622
BfmI	CTRYAG	3 cut(s)	1130, 1258, 2044
BfuI	GTATCC	2 cut(s)	633, 1025
BglII	AGATCT	1 cut(s)	1100
BisI	GCNGC	5 cut(s)	593, 939, 1133, 1565, 1593
BlsI	GCNGC	5 cut(s)	594, 940, 1134, 1566, 1594
BmcAI	AGTACT	1 cut(s)	1823
Bme1390I	CCNGG	3 cut(s)	127, 1244, 1657
Bme18I	GGWCC	3 cut(s)	122, 466, 776
BmeT110I	CYCGRG	2 cut(s)	761, 1698
BmgBI	CACGTC	1 cut(s)	554
BmgT120I	GGNCC	5 cut(s)	122, 466, 776, 1701, 1775
BmiI	GGNNCC	4 cut(s)	124, 468, 777, 1410
BmrFI	CCNGG	3 cut(s)	127, 1244, 1657
BmrI	ACTGGG	1 cut(s)	782
BmsI	GCATC	6 cut(s)	67, 416, 579, 639, 1544, 1579
BmuI	ACTGGG	1 cut(s)	782
BoxI	GACNNNNGTC	2 cut(s)	471, 1188
BpiI	GAAGAC	2 cut(s)	215, 758
BpmI	CTGGAG	3 cut(s)	324, 1519, 1695
Bpu10I	CCTNAGC	1 cut(s)	1392
Bpu14I	TTCGAA	1 cut(s)	356
BpuEI	CTTGAG	1 cut(s)	706
BpuMI	CCSGG	1 cut(s)	1244
BsaAI	YACGTR	1 cut(s)	809
BsaI	GGTCTC	1 cut(s)	1736
BsaJI	CCNNGG	3 cut(s)	125, 1412, 1463
Bsc4I	CCNNNNNNNGG	5 cut(s)	297, 347, 785, 1870, 2025
Bse1I	ACTGG	4 cut(s)	36, 777, 1253, 1678
Bse3DI	GCAATG	1 cut(s)	1781
BseBI	CCWGG	2 cut(s)	127, 1657
BseDI	CCNNGG	3 cut(s)	125, 1412, 1463
BseGI	GGATG	6 cut(s)	271, 309, 356, 654, 709, 1559
BseLI	CCNNNNNNNGG	5 cut(s)	297, 347, 785, 1870, 2025
BseMI	GCAATG	1 cut(s)	1781
BseMII	CTCAG	7 cut(s)	45, 321, 1118, 1164, 1188, 1406, 1908
BseNI	ACTGG	4 cut(s)	36, 777, 1253, 1678
BseXI	GCAGC	5 cut(s)	604, 925, 1144, 1576, 1579
BsgI	GTGCAG	1 cut(s)	927
BshFI	GGCC	5 cut(s)	197, 893, 1620, 1703, 1777
BsiHKAI	GWGCWC	1 cut(s)	99
BsiHKCI	CYCGRG	2 cut(s)	761, 1698
BsiSI	CCGG	1 cut(s)	1244
BslFI	GGGAC	4 cut(s)	108, 686, 721, 1667
BslI	CCNNNNNNNGG	5 cut(s)	297, 347, 785, 1870, 2025
BsmAI	GTCTC	4 cut(s)	32, 342, 758, 1736
BsmFI	GGGAC	4 cut(s)	108, 686, 721, 1667
BsmI	GAATGC	2 cut(s)	67, 1856
BsnI	GGCC	5 cut(s)	197, 893, 1620, 1703, 1777
Bso31I	GGTCTC	1 cut(s)	1736
BsoBI	CYCGRG	2 cut(s)	761, 1698
Bsp119I	TTCGAA	1 cut(s)	356
Bsp1286I	GDGCHC	1 cut(s)	99
BspACI	CCGC	2 cut(s)	1520, 2020
BspANI	GGCC	5 cut(s)	197, 893, 1620, 1703, 1777
BspCNI	CTCAG	7 cut(s)	46, 322, 1117, 1165, 1189, 1405, 1909
BspHI	TCATGA	2 cut(s)	730, 1600
BspLI	GGNNCC	4 cut(s)	124, 468, 777, 1410
BspMAI	CTGCAG	3 cut(s)	1134, 1262, 2048
BspPI	GGATC	2 cut(s)	374, 1961
BspQI	GCTCTTC	1 cut(s)	1503
BspT104I	TTCGAA	1 cut(s)	356
BspTNI	GGTCTC	1 cut(s)	1736
BsrDI	GCAATG	1 cut(s)	1781
BsrI	ACTGG	4 cut(s)	36, 777, 1253, 1678
BssECI	CCNNGG	3 cut(s)	125, 1412, 1463
BssNAI	GTATAC	1 cut(s)	1149
BssT1I	CCWWGG	1 cut(s)	1412
Bst1107I	GTATAC	1 cut(s)	1149
Bst2UI	CCWGG	2 cut(s)	127, 1657
Bst4CI	ACNGT	6 cut(s)	8, 108, 542, 1002, 1826, 1989
Bst6I	CTCTTC	4 cut(s)	37, 1503, 1712, 1734
BstAPI	GCANNNNNTGC	2 cut(s)	426, 589
BstBAI	YACGTR	1 cut(s)	809
BstBI	TTCGAA	1 cut(s)	356
BstC8I	GCNNGC	2 cut(s)	943, 1569
BstDEI	CTNAG	8 cut(s)	54, 330, 548, 1104, 1173, 1197, 1392, 1917
BstDSI	CCRYGG	1 cut(s)	1463
BstEII	GGTNACC	1 cut(s)	1859
BstENI	CCTNNNNNAGG	1 cut(s)	1868
BstF5I	GGATG	6 cut(s)	271, 309, 356, 654, 709, 1559
BstHHI	GCGC	1 cut(s)	547
BstMAI	GTCTC	4 cut(s)	32, 342, 758, 1736
BstMWI	GCNNNNNNNGC	6 cut(s)	389, 426, 589, 1519, 1577, 1783
BstNI	CCWGG	2 cut(s)	127, 1657
BstNSI	RCATGY	1 cut(s)	150
BstPAI	GACNNNNGTC	2 cut(s)	471, 1188
BstPI	GGTNACC	1 cut(s)	1859
BstSCI	CCNGG	3 cut(s)	125, 1242, 1655
BstSFI	CTRYAG	3 cut(s)	1130, 1258, 2044
BstV1I	GCAGC	5 cut(s)	604, 925, 1144, 1576, 1579
BstV2I	GAAGAC	2 cut(s)	215, 758
BstX2I	RGATCY	2 cut(s)	366, 1100
BstXI	CCANNNNNNTGG	1 cut(s)	477
BstYI	RGATCY	2 cut(s)	366, 1100
BstZ17I	GTATAC	1 cut(s)	1149
BsuI	GTATCC	2 cut(s)	633, 1025
BsuRI	GGCC	5 cut(s)	197, 893, 1620, 1703, 1777
BtgI	CCRYGG	1 cut(s)	1463
BtrI	CACGTC	1 cut(s)	554
BtsCI	GGATG	6 cut(s)	271, 309, 356, 654, 709, 1559
BtsIMutI	CAGTG	1 cut(s)	43
Cac8I	GCNNGC	2 cut(s)	943, 1569
CaiI	CAGNNNCTG	1 cut(s)	112
CciI	TCATGA	2 cut(s)	730, 1600
CfoI	GCGC	1 cut(s)	547
Cfr13I	GGNCC	5 cut(s)	122, 466, 776, 1701, 1775
CseI	GACGC	1 cut(s)	999
Csp6I	GTAC	3 cut(s)	806, 1089, 1822
CviQI	GTAC	3 cut(s)	806, 1089, 1822
DdeI	CTNAG	8 cut(s)	54, 330, 548, 1104, 1173, 1197, 1392, 1917
DraI	TTTAAA	2 cut(s)	721, 1357
EaeI	YGGCCR	2 cut(s)	195, 891
Eam1104I	CTCTTC	4 cut(s)	37, 1503, 1712, 1734
EarI	CTCTTC	4 cut(s)	37, 1503, 1712, 1734
Ecl136II	GAGCTC	1 cut(s)	97
Eco130I	CCWWGG	1 cut(s)	1412
Eco24I	GRGCYC	1 cut(s)	99
Eco31I	GGTCTC	1 cut(s)	1736
Eco32I	GATATC	1 cut(s)	2011
Eco47I	GGWCC	3 cut(s)	122, 466, 776
Eco53kI	GAGCTC	1 cut(s)	97
Eco88I	CYCGRG	2 cut(s)	761, 1698
Eco91I	GGTNACC	1 cut(s)	1859
EcoICRI	GAGCTC	1 cut(s)	97
EcoNI	CCTNNNNNAGG	1 cut(s)	1868
EcoO109I	RGGNCCY	1 cut(s)	466
EcoO65I	GGTNACC	1 cut(s)	1859
EcoRI	GAATTC	1 cut(s)	1874
EcoRII	CCWGG	2 cut(s)	125, 1655
EcoRV	GATATC	1 cut(s)	2011
EcoT14I	CCWWGG	1 cut(s)	1412
EcoT38I	GRGCYC	1 cut(s)	99
ErhI	CCWWGG	1 cut(s)	1412
FalI	AAGNNNNNCTT	4 cut(s)	16, 48, 938, 970
FaqI	GGGAC	4 cut(s)	108, 686, 721, 1667
FauI	CCCGC	2 cut(s)	1527, 2027
FblI	GTMKAC	1 cut(s)	1148
Fnu4HI	GCNGC	5 cut(s)	593, 939, 1133, 1565, 1593
FokI	GGATG	6 cut(s)	258, 296, 363, 661, 716, 1566
FriOI	GRGCYC	1 cut(s)	99
Fsp4HI	GCNGC	5 cut(s)	593, 939, 1133, 1565, 1593
FspBI	CTAG	5 cut(s)	258, 596, 903, 1302, 1622
GlaI	GCGC	1 cut(s)	546
GluI	GCNGC	5 cut(s)	593, 939, 1133, 1565, 1593
GsuI	CTGGAG	3 cut(s)	324, 1519, 1695
HaeIII	GGCC	5 cut(s)	197, 893, 1620, 1703, 1777
HapII	CCGG	1 cut(s)	1244
HgaI	GACGC	1 cut(s)	999
HhaI	GCGC	1 cut(s)	547
Hin6I	GCGC	1 cut(s)	545
HinP1I	GCGC	1 cut(s)	545
HincII	GTYRAC	3 cut(s)	154, 1939, 1996
HindII	GTYRAC	3 cut(s)	154, 1939, 1996
HindIII	AAGCTT	1 cut(s)	249
HpaII	CCGG	1 cut(s)	1244
HphI	GGTGA	9 cut(s)	312, 515, 851, 1193, 1204, 1242, 1621, 1655, 1853
Hpy166II	GTNNAC	5 cut(s)	154, 929, 1149, 1939, 1996
Hpy8I	GTNNAC	5 cut(s)	154, 929, 1149, 1939, 1996
Hpy99I	CGWCG	1 cut(s)	659
HpyAV	CCTTC	6 cut(s)	110, 124, 736, 981, 1353, 1464
HpyCH4III	ACNGT	6 cut(s)	8, 108, 542, 1002, 1826, 1989
HpyCH4IV	ACGT	3 cut(s)	553, 657, 808
HpyF10VI	GCNNNNNNNGC	6 cut(s)	389, 426, 589, 1519, 1577, 1783
HpyF3I	CTNAG	8 cut(s)	54, 330, 548, 1104, 1173, 1197, 1392, 1917
HpySE526I	ACGT	3 cut(s)	553, 657, 808
HspAI	GCGC	1 cut(s)	545
LguI	GCTCTTC	1 cut(s)	1503
LmnI	GCTCC	3 cut(s)	102, 434, 1414
Lsp1109I	GCAGC	5 cut(s)	604, 925, 1144, 1576, 1579
LweI	GCATC	6 cut(s)	67, 416, 579, 639, 1544, 1579
MaeI	CTAG	5 cut(s)	258, 596, 903, 1302, 1622
MaeII	ACGT	3 cut(s)	553, 657, 808
MaeIII	GTNAC	6 cut(s)	530, 964, 1181, 1190, 1754, 1859
MfeI	CAATTG	2 cut(s)	584, 867
MflI	RGATCY	2 cut(s)	366, 1100
MhlI	GDGCHC	1 cut(s)	99
MlsI	TGGCCA	1 cut(s)	893
MluNI	TGGCCA	1 cut(s)	893
MlyI	GAGTC	5 cut(s)	248, 1325, 1538, 1654, 1991
MmeI	TCCRAC	1 cut(s)	337
Mox20I	TGGCCA	1 cut(s)	893
MroXI	GAANNNNTTC	2 cut(s)	138, 2039
MscI	TGGCCA	1 cut(s)	893
MseI	TTAA	5 cut(s)	720, 783, 1356, 1478, 2062
MslI	CAYNNNNRTG	3 cut(s)	72, 1638, 1752
Msp20I	TGGCCA	1 cut(s)	893
MspA1I	CMGCKG	1 cut(s)	938
MspI	CCGG	1 cut(s)	1244
MspR9I	CCNGG	3 cut(s)	127, 1244, 1657
MunI	CAATTG	2 cut(s)	584, 867
Mva1269I	GAATGC	2 cut(s)	67, 1856
MvaI	CCWGG	2 cut(s)	127, 1657
MwoI	GCNNNNNNNGC	6 cut(s)	389, 426, 589, 1519, 1577, 1783
NciI	CCSGG	1 cut(s)	1244
NlaIV	GGNNCC	4 cut(s)	124, 468, 777, 1410
NmuCI	GTSAC	5 cut(s)	530, 1181, 1190, 1754, 1859
NspI	RCATGY	1 cut(s)	150
NspV	TTCGAA	1 cut(s)	356
PaeR7I	CTCGAG	1 cut(s)	761
PagI	TCATGA	2 cut(s)	730, 1600
PciSI	GCTCTTC	1 cut(s)	1503
PctI	GAATGC	2 cut(s)	67, 1856
PdmI	GAANNNNTTC	2 cut(s)	138, 2039
PfeI	GAWTC	9 cut(s)	497, 512, 791, 1064, 1247, 1264, 1279, 1646, 1694
PflMI	CCANNNNNTGG	2 cut(s)	347, 785
PkrI	GCNGC	5 cut(s)	594, 940, 1134, 1566, 1594
PleI	GAGTC	5 cut(s)	247, 1324, 1537, 1654, 1991
PpsI	GAGTC	5 cut(s)	247, 1324, 1537, 1654, 1991
Ppu21I	YACGTR	1 cut(s)	809
PpuMI	RGGWCCY	1 cut(s)	466
PshAI	GACNNNNGTC	2 cut(s)	471, 1188
PshBI	ATTAAT	1 cut(s)	783
Psp124BI	GAGCTC	1 cut(s)	99
Psp5II	RGGWCCY	1 cut(s)	466
Psp6I	CCWGG	2 cut(s)	125, 1655
PspEI	GGTNACC	1 cut(s)	1859
PspGI	CCWGG	2 cut(s)	125, 1655
PspN4I	GGNNCC	4 cut(s)	124, 468, 777, 1410
PspPI	GGNCC	5 cut(s)	122, 466, 776, 1701, 1775
PspPPI	RGGWCCY	1 cut(s)	466
PsrI	GAACNNNNNNTAC	2 cut(s)	1805, 1837
PstI	CTGCAG	3 cut(s)	1134, 1262, 2048
PstNI	CAGNNNCTG	1 cut(s)	112
PsuI	RGATCY	2 cut(s)	366, 1100
PvuII	CAGCTG	1 cut(s)	938
RsaI	GTAC	3 cut(s)	807, 1090, 1823
RsaNI	GTAC	3 cut(s)	806, 1089, 1822
RseI	CAYNNNNRTG	3 cut(s)	72, 1638, 1752
SacI	GAGCTC	1 cut(s)	99
SapI	GCTCTTC	1 cut(s)	1503
SaqAI	TTAA	5 cut(s)	720, 783, 1356, 1478, 2062
SatI	GCNGC	5 cut(s)	593, 939, 1133, 1565, 1593
Sau96I	GGNCC	5 cut(s)	122, 466, 776, 1701, 1775
ScaI	AGTACT	1 cut(s)	1823
SchI	GAGTC	5 cut(s)	248, 1325, 1538, 1654, 1991
ScrFI	CCNGG	3 cut(s)	127, 1244, 1657
SduI	GDGCHC	1 cut(s)	99
SfaNI	GCATC	6 cut(s)	67, 416, 579, 639, 1544, 1579
SfcI	CTRYAG	3 cut(s)	1130, 1258, 2044
Sfr274I	CTCGAG	1 cut(s)	761
SfuI	TTCGAA	1 cut(s)	356
SinI	GGWCC	3 cut(s)	122, 466, 776
SlaI	CTCGAG	1 cut(s)	761
SmiMI	CAYNNNNRTG	3 cut(s)	72, 1638, 1752
SmlI	CTYRAG	2 cut(s)	685, 761
SmoI	CTYRAG	2 cut(s)	685, 761
SsiI	CCGC	2 cut(s)	1520, 2020
SspMI	CTAG	5 cut(s)	258, 596, 903, 1302, 1622
SstI	GAGCTC	1 cut(s)	99
StyD4I	CCNGG	3 cut(s)	125, 1242, 1655
StyI	CCWWGG	1 cut(s)	1412
TaaI	ACNGT	6 cut(s)	8, 108, 542, 1002, 1826, 1989
TaiI	ACGT	3 cut(s)	556, 660, 811
TaqI	TCGA	4 cut(s)	356, 654, 762, 996
TatI	WGTACW	1 cut(s)	1821
TfiI	GAWTC	9 cut(s)	497, 512, 791, 1064, 1247, 1264, 1279, 1646, 1694
Tru1I	TTAA	5 cut(s)	720, 783, 1356, 1478, 2062
Tru9I	TTAA	5 cut(s)	720, 783, 1356, 1478, 2062
TscAI	CASTG	1 cut(s)	43
TseFI	GTSAC	5 cut(s)	530, 1181, 1190, 1754, 1859
TseI	GCWGC	5 cut(s)	592, 938, 1132, 1564, 1592
Tsp45I	GTSAC	5 cut(s)	530, 1181, 1190, 1754, 1859
TspDTI	ATGAA	6 cut(s)	609, 719, 897, 963, 1521, 1557
TspGWI	ACGGA	2 cut(s)	1883, 2047
TspRI	CASTG	1 cut(s)	43
Van91I	CCANNNNNTGG	2 cut(s)	347, 785
VpaK11BI	GGWCC	3 cut(s)	122, 466, 776
VspI	ATTAAT	1 cut(s)	783
XagI	CCTNNNNNAGG	1 cut(s)	1868
XapI	RAATTY	7 cut(s)	18, 169, 1113, 1297, 1352, 1707, 1874
XceI	RCATGY	1 cut(s)	150
XhoI	CTCGAG	1 cut(s)	761
XmiI	GTMKAC	1 cut(s)	1148
XmnI	GAANNNNTTC	2 cut(s)	138, 2039
XspI	CTAG	5 cut(s)	258, 596, 903, 1302, 1622
ZrmI	AGTACT	1 cut(s)	1823

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.