FvH4_1g11140

Protein of unknown function (DUF632)

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
Physical Location & Seq
Reverse (-)
6075799 .. 6079832
4034 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g11140.t1

Sequence Viewer

Length: 2118 bp
ATGGGGTGTGTTGTGTCAAAGAAGAACGAGGGAGACGACGTCGTTTGGCTCTGCAAGGAGAGGAAGCGGCAGCTGAAGCTGGCTGTGGAGAGAAGGTATGGTTTTGCAGAAGCACAATGTAAGTACAACCAGTCACTCTACTCAGTAGCAGCTGCTATAAGGTTGTTTGTAGCCAGACATTCCTCGCCATCTTCACCTTTTCTGATTACATTTCCTTCTGTGAATCTTGAAAATGCTGAGCCCATTGTCCAAAATAACCCCATGTTGCTTCAGCAGAGGCCAAGTGAGCCAATGACCCATAAGACCACCATTGGTGTTGGGTCGGTTTGTGATTCTGTGAAGTTACAGGAAGACCCAGATGGGAAAAGTGAGAGTGATCAGGGGGAGGTGGTTTGTGAGCATTTTCATGATGTGGTGGAGTCACCAGAGAGGGATTTTGGGTGGGATTTCTTTAACCCTTTCTATGATGGGGTGAGGGTAGAATTGGTAAATGGGTTTGATGAGGATTTGAGGGCTGTGAGAGAGGAGGAAGGGATTCCTGAGCTGGAGGAAGTGGGGGAAGGAGGAGTGATAAGTGAGGAAAAGGTTGGGGATTTGAGTAATTGTGATGTGGGTCATGAGGAGGAGAGTGGAGGTGTGGCTGTGAGTGATGGTAATGGTAATGGTAACCAAGTAGGGGAAAGGAGTCTGAGGGTGATTGATACACCCAAAGAGGGGAGGGAGTTGTTGGAGGCTTTGAGAGATGTTGAGGACCATTTCATGAAGGCCTATGATTCTGGGTTGGATGTTTCAAGGATGCTAGAGACTAACATGGTTCAGATGCAATCTGCATTGGAGGAGATTAAAGGTAACTCGACTAAGCTTATCCGTTCAATCACACGGAGTCGCTCCACCACGTCCACATTATCTTGGTCTTCCTCTGGCAAAAGTTTGCTTACATCTAGTTCCAAAAGTTCTTCAGCCTGGACTCAGATCAGCAATGATCTCTTTGATGACTATGGAGCAATGGGATCCGGGAACCATTCATTGACATTAGGAAGGTTATATGCCTGGGAGAAGAAGCTATTTCAGGAGGTGAAGGCTGGAGAGGAAACCAGGAAAATTTATGAGCGAAAATGCTCCCAATTGAGAGACCAAGATGTAAGAGGAGATGGCCTAAACAGTAGGGACAAAGTTGGAGTTGAAATAAAGAACTTGTATGCCAGAATTTTGGTTTCCATAAGAAGTGCTGAGTCTATATCACAAAGAATTGAACAGCTGAGAGATGAAGAGCTGCAGCCACAACTTATCGAGCTGCTAAAGGGCTTAATGAGAAATTGGCAGATAATGTCGGAATTGCATGAAACTCAAAACAAAATCATGTCTGAAGTGAGGTCACTCAACTGCCCCACCATTGGAATGTTCTGCAATGACTCGCACCAGCTTGCTACTTTCCGGCTTGAGGCCGAACTTCAAAACTGGCGTGGTTGCTTTGCATCATACTATTCTTCCCAGAAAGCGTACATTGAAGCTCTTCATGGTTGGCTGTTAAAGTTTGTTGCCCCTGAAACTGAATTCTACTTGAAGGGCATGTCTCCACTTCCATTGTGTACACTCAACGGGCCACCACTACTTGCAATCTGTCATAACTGGTTAACTTCTATGGATAAACTGCCAGATGGGGCAGTGATTAGTGCCATGAAAAGCTTTGGGAAAGATATCAGAGCCCTGTTGGCTCAACAAGGGGAGGAGCACCAACAGAAGAGGAAGGTTGATGGACTCACCAGAGAACTTGATAAGAAAGTTTTGGCATTTGAAAGGACAGAGAGGAGGCTTCTTGGGGTGAAGTTCTCTGAGAAAGAAACAGAACTGCATGTGCCAAATCGAATTGAGTATTTGACTGGGATGAAGGATCAGCTGGATATGTTTAGGAAAAAGCTAGACACCGAGAAGGCAAAGCATCAGACTAGCATGCAGGAGACACAGCACATCGCAGTGAATGGATTTCAGACAGGTTTTACTTCAGTTTTTGAATCCTTAGCCGAGTTTTCAAAGACTGCTATGAGATTGTACGCTGACATTATCACTTTCGGCGAAAATGCTAAGGGGGTAGATGAAAAAAGTAGCAACCCCTCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

706

Amino Acids

79.42

Weight (kDa)

5.38

Isoelectric Point (pI)

47.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF630 PF04783 1 - 60 2.8e-18 Protein of unknown function (DUF630)
DUF632 PF04782 242 - 568 4.1e-103 Protein of unknown function (DUF632)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 42
AciI CCGC 1 cut(s) 67
AclWI GGATC 3 cut(s) 1005, 1018, 1899
AcsI RAATTY 3 cut(s) 1101, 1206, 1553
AcuI CTGAAG 5 cut(s) 95, 254, 942, 1386, 1986
AcyI GRCGYC 1 cut(s) 39
AfaI GTAC 4 cut(s) 125, 1502, 1591, 2051
AfiI CCNNNNNNNGG 5 cut(s) 676, 713, 714, 1394, 1441
AjiI CACGTC 1 cut(s) 897
AjnI CCWGG 3 cut(s) 962, 1049, 1094
Alw21I GWGCWC 1 cut(s) 1734
Alw26I GTCTC 5 cut(s) 27, 797, 1125, 1578, 1952
AlwI GGATC 3 cut(s) 1005, 1018, 1899
AoxI GGCC 5 cut(s) 278, 765, 1153, 1443, 1601
ApeKI GCWGC 6 cut(s) 70, 149, 152, 1273, 1276, 1294
ApoI RAATTY 3 cut(s) 1101, 1206, 1553
Asp700I GAANNNNTTC 2 cut(s) 534, 1512
AspS9I GGNCC 2 cut(s) 751, 1601
AsuC2I CCSGG 1 cut(s) 1015
AsuHPI GGTGA 7 cut(s) 186, 414, 484, 706, 1087, 1753, 1834
AvaII GGWCC 1 cut(s) 751
BamHI GGATCC 1 cut(s) 1010
BanII GRGCYC 2 cut(s) 243, 1708
BbsI GAAGAC 2 cut(s) 357, 906
Bbv12I GWGCWC 1 cut(s) 1734
BbvI GCAGC 6 cut(s) 82, 139, 161, 1260, 1281, 1288
BccI CCATC 7 cut(s) 196, 353, 461, 644, 1145, 1652, 1748
BciT130I CCWGG 3 cut(s) 964, 1051, 1096
BclI TGATCA 1 cut(s) 376
BcnI CCSGG 1 cut(s) 1015
BcoDI GTCTC 5 cut(s) 27, 797, 1125, 1578, 1952
BfaI CTAG 4 cut(s) 800, 942, 1919, 1947
BfmI CTRYAG 1 cut(s) 1274
BglI GCCNNNNNGGC 1 cut(s) 1712
BisI GCNGC 7 cut(s) 68, 71, 150, 153, 1274, 1277, 1295
BlpI GCTNAGC 1 cut(s) 237
BlsI GCNGC 7 cut(s) 69, 72, 151, 154, 1275, 1278, 1296
Bme1390I CCNGG 4 cut(s) 964, 1015, 1051, 1096
Bme18I GGWCC 1 cut(s) 751
BmgBI CACGTC 1 cut(s) 897
BmgT120I GGNCC 2 cut(s) 751, 1601
BmiI GGNNCC 2 cut(s) 1012, 1019
BmrFI CCNGG 4 cut(s) 964, 1015, 1051, 1096
BmrI ACTGGG 1 cut(s) 1890
BmsI GCATC 4 cut(s) 786, 810, 1484, 1948
BmuI ACTGGG 1 cut(s) 1890
BpiI GAAGAC 2 cut(s) 357, 906
BpmI CTGGAG 2 cut(s) 566, 1104
Bpu10I CCTNAGC 3 cut(s) 540, 2017, 2082
Bpu1102I GCTNAGC 1 cut(s) 237
BpuEI CTTGAG 1 cut(s) 1460
BpuMI CCSGG 1 cut(s) 1015
BsaHI GRCGYC 1 cut(s) 39
BsaI GGTCTC 1 cut(s) 1125
BsaJI CCNNGG 1 cut(s) 1050
BsaXI ACNNNNNCTCC 4 cut(s) 24, 54, 80, 110
Bsc4I CCNNNNNNNGG 5 cut(s) 676, 713, 714, 1394, 1441
Bse1I ACTGG 4 cut(s) 130, 1463, 1634, 1885
Bse3DI GCAATG 3 cut(s) 985, 1011, 1414
BseBI CCWGG 3 cut(s) 964, 1051, 1096
BseDI CCNNGG 1 cut(s) 1050
BseGI GGATG 3 cut(s) 790, 801, 1890
BseLI CCNNNNNNNGG 5 cut(s) 676, 713, 714, 1394, 1441
BseMI GCAATG 3 cut(s) 985, 1011, 1414
BseMII CTCAG 8 cut(s) 156, 228, 531, 680, 983, 1221, 1250, 1824
BseNI ACTGG 4 cut(s) 130, 1463, 1634, 1885
BseRI GAGGAG 8 cut(s) 539, 579, 635, 638, 851, 1161, 1742, 1822
BseXI GCAGC 6 cut(s) 82, 139, 161, 1260, 1281, 1288
BshFI GGCC 5 cut(s) 280, 767, 1155, 1445, 1603
BsiHKAI GWGCWC 1 cut(s) 1734
BsiSI CCGG 2 cut(s) 1014, 1435
BslFI GGGAC 1 cut(s) 1181
BslI CCNNNNNNNGG 5 cut(s) 676, 713, 714, 1394, 1441
BsmAI GTCTC 5 cut(s) 27, 797, 1125, 1578, 1952
BsmBI CGTCTC 1 cut(s) 27
BsmFI GGGAC 1 cut(s) 1181
BsnI GGCC 5 cut(s) 280, 767, 1155, 1445, 1603
Bso31I GGTCTC 1 cut(s) 1125
Bsp1286I GDGCHC 3 cut(s) 243, 1708, 1734
Bsp1407I TGTACA 1 cut(s) 1589
Bsp143I GATC 5 cut(s) 376, 972, 982, 1010, 1891
Bsp1720I GCTNAGC 1 cut(s) 237
BspACI CCGC 1 cut(s) 67
BspANI GGCC 5 cut(s) 280, 767, 1155, 1445, 1603
BspCNI CTCAG 8 cut(s) 155, 229, 532, 681, 982, 1222, 1251, 1825
BspHI TCATGA 3 cut(s) 406, 616, 759
BspLI GGNNCC 2 cut(s) 1012, 1019
BspMAI CTGCAG 1 cut(s) 1278
BspPI GGATC 3 cut(s) 1005, 1018, 1899
BspQI GCTCTTC 2 cut(s) 1263, 1518
BspTNI GGTCTC 1 cut(s) 1125
BsrDI GCAATG 3 cut(s) 985, 1011, 1414
BsrGI TGTACA 1 cut(s) 1589
BsrI ACTGG 4 cut(s) 130, 1463, 1634, 1885
BssECI CCNNGG 1 cut(s) 1050
BssMI GATC 5 cut(s) 376, 972, 982, 1010, 1891
BssNI GRCGYC 1 cut(s) 39
Bst2UI CCWGG 3 cut(s) 964, 1051, 1096
Bst4CI ACNGT 1 cut(s) 1163
Bst6I CTCTTC 3 cut(s) 1263, 1518, 1736
BstACI GRCGYC 1 cut(s) 39
BstAUI TGTACA 1 cut(s) 1589
BstC8I GCNNGC 3 cut(s) 81, 1425, 1952
BstEII GGTNACC 1 cut(s) 665
BstF5I GGATG 3 cut(s) 790, 801, 1890
BstKTI GATC 5 cut(s) 379, 975, 985, 1013, 1894
BstMAI GTCTC 5 cut(s) 27, 797, 1125, 1578, 1952
BstMBI GATC 5 cut(s) 376, 972, 982, 1010, 1891
BstMWI GCNNNNNNNGC 3 cut(s) 76, 286, 1712
BstNI CCWGG 3 cut(s) 964, 1051, 1096
BstNSI RCATGY 3 cut(s) 1573, 1856, 1954
BstPI GGTNACC 1 cut(s) 665
BstSCI CCNGG 4 cut(s) 962, 1013, 1049, 1094
BstSFI CTRYAG 1 cut(s) 1274
BstV1I GCAGC 6 cut(s) 82, 139, 161, 1260, 1281, 1288
BstV2I GAAGAC 2 cut(s) 357, 906
BstX2I RGATCY 1 cut(s) 1010
BstXI CCANNNNNNTGG 1 cut(s) 1210
BstYI RGATCY 1 cut(s) 1010
BsuRI GGCC 5 cut(s) 280, 767, 1155, 1445, 1603
BtgZI GCGATG 1 cut(s) 1954
BtrI CACGTC 1 cut(s) 897
BtsCI GGATG 3 cut(s) 790, 801, 1890
BtsI GCAGTG 2 cut(s) 1671, 1980
BtsIMutI CAGTG 2 cut(s) 1671, 1980
Cac8I GCNNGC 3 cut(s) 81, 1425, 1952
CciI TCATGA 3 cut(s) 406, 616, 759
Cfr13I GGNCC 2 cut(s) 751, 1601
Csp6I GTAC 4 cut(s) 124, 1501, 1590, 2050
CspCI CAANNNNNGTGG 2 cut(s) 1566, 1601
CviQI GTAC 4 cut(s) 124, 1501, 1590, 2050
DpnI GATC 5 cut(s) 378, 974, 984, 1012, 1893
DpnII GATC 5 cut(s) 376, 972, 982, 1010, 1891
Eam1104I CTCTTC 3 cut(s) 1263, 1518, 1736
EarI CTCTTC 3 cut(s) 1263, 1518, 1736
Eco147I AGGCCT 1 cut(s) 767
Eco24I GRGCYC 2 cut(s) 243, 1708
Eco31I GGTCTC 1 cut(s) 1125
Eco32I GATATC 1 cut(s) 1699
Eco47I GGWCC 1 cut(s) 751
Eco57I CTGAAG 5 cut(s) 95, 254, 942, 1386, 1986
Eco91I GGTNACC 1 cut(s) 665
EcoO65I GGTNACC 1 cut(s) 665
EcoRI GAATTC 1 cut(s) 1553
EcoRII CCWGG 3 cut(s) 962, 1049, 1094
EcoRV GATATC 1 cut(s) 1699
EcoT38I GRGCYC 2 cut(s) 243, 1708
Esp3I CGTCTC 1 cut(s) 27
FaqI GGGAC 1 cut(s) 1181
FbaI TGATCA 1 cut(s) 376
Fnu4HI GCNGC 7 cut(s) 68, 71, 150, 153, 1274, 1277, 1295
FokI GGATG 3 cut(s) 797, 808, 1897
FriOI GRGCYC 2 cut(s) 243, 1708
Fsp4HI GCNGC 7 cut(s) 68, 71, 150, 153, 1274, 1277, 1295
FspBI CTAG 4 cut(s) 800, 942, 1919, 1947
GluI GCNGC 7 cut(s) 68, 71, 150, 153, 1274, 1277, 1295
GsuI CTGGAG 2 cut(s) 566, 1104
HaeIII GGCC 5 cut(s) 280, 767, 1155, 1445, 1603
HapII CCGG 2 cut(s) 1014, 1435
Hin1I GRCGYC 1 cut(s) 39
HincII GTYRAC 1 cut(s) 1635
HindII GTYRAC 1 cut(s) 1635
HindIII AAGCTT 2 cut(s) 860, 1684
HpaI GTTAAC 1 cut(s) 1635
HpaII CCGG 2 cut(s) 1014, 1435
HphI GGTGA 7 cut(s) 186, 414, 484, 706, 1087, 1753, 1834
Hpy166II GTNNAC 4 cut(s) 900, 1590, 1592, 1635
Hpy188III TCNNGA 7 cut(s) 227, 407, 539, 617, 760, 1070, 2115
Hpy8I GTNNAC 4 cut(s) 900, 1590, 1592, 1635
Hpy99I CGWCG 2 cut(s) 41, 44
HpyCH4III ACNGT 1 cut(s) 1163
HpyCH4IV ACGT 2 cut(s) 39, 896
HpyF10VI GCNNNNNNNGC 3 cut(s) 76, 286, 1712
HpySE526I ACGT 2 cut(s) 39, 896
Hsp92I GRCGYC 1 cut(s) 39
Ksp22I TGATCA 1 cut(s) 376
KspAI GTTAAC 1 cut(s) 1635
Kzo9I GATC 5 cut(s) 376, 972, 982, 1010, 1891
LguI GCTCTTC 2 cut(s) 1263, 1518
LmnI GCTCC 4 cut(s) 893, 1001, 1124, 1729
Lsp1109I GCAGC 6 cut(s) 82, 139, 161, 1260, 1281, 1288
LweI GCATC 4 cut(s) 786, 810, 1484, 1948
MaeI CTAG 4 cut(s) 800, 942, 1919, 1947
MaeII ACGT 2 cut(s) 39, 896
MaeIII GTNAC 6 cut(s) 132, 342, 420, 665, 848, 1374
MalI GATC 5 cut(s) 378, 974, 984, 1012, 1893
MboI GATC 5 cut(s) 376, 972, 982, 1010, 1891
MfeI CAATTG 1 cut(s) 1124
MflI RGATCY 1 cut(s) 1010
MhlI GDGCHC 3 cut(s) 243, 1708, 1734
MlyI GAGTC 7 cut(s) 428, 694, 892, 961, 1241, 1406, 1752
MmeI TCCRAC 4 cut(s) 708, 762, 1156, 1311
MroXI GAANNNNTTC 2 cut(s) 534, 1512
MseI TTAA 5 cut(s) 453, 843, 1307, 1529, 1634
MslI CAYNNNNRTG 3 cut(s) 405, 1397, 1973
MspA1I CMGCKG 4 cut(s) 73, 152, 1258, 1897
MspI CCGG 2 cut(s) 1014, 1435
MspR9I CCNGG 4 cut(s) 964, 1015, 1051, 1096
MunI CAATTG 1 cut(s) 1124
MvaI CCWGG 3 cut(s) 964, 1051, 1096
MwoI GCNNNNNNNGC 3 cut(s) 76, 286, 1712
NciI CCSGG 1 cut(s) 1015
NdeII GATC 5 cut(s) 376, 972, 982, 1010, 1891
NlaIV GGNNCC 2 cut(s) 1012, 1019
NmeAIII GCCGAG 1 cut(s) 2047
NmuCI GTSAC 3 cut(s) 132, 420, 1374
NspI RCATGY 3 cut(s) 1573, 1856, 1954
PaeI GCATGC 1 cut(s) 1954
PagI TCATGA 3 cut(s) 406, 616, 759
PceI AGGCCT 1 cut(s) 767
PciSI GCTCTTC 2 cut(s) 1263, 1518
PcsI WCGNNNNNNNCGW 1 cut(s) 33
PdmI GAANNNNTTC 2 cut(s) 534, 1512
PfeI GAWTC 5 cut(s) 223, 332, 535, 773, 2012
PflFI GACNNNGTC 1 cut(s) 38
PfoI TCCNGGA 1 cut(s) 1013
PkrI GCNGC 7 cut(s) 69, 72, 151, 154, 1275, 1278, 1296
PleI GAGTC 7 cut(s) 427, 693, 891, 961, 1240, 1406, 1752
PpsI GAGTC 7 cut(s) 427, 693, 891, 961, 1240, 1406, 1752
Psp6I CCWGG 3 cut(s) 962, 1049, 1094
PspEI GGTNACC 1 cut(s) 665
PspGI CCWGG 3 cut(s) 962, 1049, 1094
PspN4I GGNNCC 2 cut(s) 1012, 1019
PspPI GGNCC 2 cut(s) 751, 1601
PstI CTGCAG 1 cut(s) 1278
PsuI RGATCY 1 cut(s) 1010
PsyI GACNNNGTC 1 cut(s) 38
PvuII CAGCTG 4 cut(s) 73, 152, 1258, 1897
RsaI GTAC 4 cut(s) 125, 1502, 1591, 2051
RsaNI GTAC 4 cut(s) 124, 1501, 1590, 2050
RseI CAYNNNNRTG 3 cut(s) 405, 1397, 1973
SapI GCTCTTC 2 cut(s) 1263, 1518
SaqAI TTAA 5 cut(s) 453, 843, 1307, 1529, 1634
SatI GCNGC 7 cut(s) 68, 71, 150, 153, 1274, 1277, 1295
Sau3AI GATC 5 cut(s) 376, 972, 982, 1010, 1891
Sau96I GGNCC 2 cut(s) 751, 1601
SchI GAGTC 7 cut(s) 428, 694, 892, 961, 1241, 1406, 1752
ScrFI CCNGG 4 cut(s) 964, 1015, 1051, 1096
SduI GDGCHC 3 cut(s) 243, 1708, 1734
SfaNI GCATC 4 cut(s) 786, 810, 1484, 1948
SfcI CTRYAG 1 cut(s) 1274
SinI GGWCC 1 cut(s) 751
SmiMI CAYNNNNRTG 3 cut(s) 405, 1397, 1973
SmlI CTYRAG 1 cut(s) 1439
SmoI CTYRAG 1 cut(s) 1439
SphI GCATGC 1 cut(s) 1954
SseBI AGGCCT 1 cut(s) 767
SsiI CCGC 1 cut(s) 67
SspMI CTAG 4 cut(s) 800, 942, 1919, 1947
StuI AGGCCT 1 cut(s) 767
StyD4I CCNGG 4 cut(s) 962, 1013, 1049, 1094
TaaI ACNGT 1 cut(s) 1163
TaiI ACGT 2 cut(s) 42, 899
TaqI TCGA 3 cut(s) 854, 1290, 1864
TatI WGTACW 2 cut(s) 123, 1589
TauI GCSGC 1 cut(s) 70
TfiI GAWTC 5 cut(s) 223, 332, 535, 773, 2012
Tru1I TTAA 5 cut(s) 453, 843, 1307, 1529, 1634
Tru9I TTAA 5 cut(s) 453, 843, 1307, 1529, 1634
TscAI CASTG 2 cut(s) 1671, 1980
TseFI GTSAC 3 cut(s) 132, 420, 1374
TseI GCWGC 6 cut(s) 70, 149, 152, 1273, 1276, 1294
Tsp45I GTSAC 3 cut(s) 132, 420, 1374
TspGWI ACGGA 2 cut(s) 857, 895
TspRI CASTG 2 cut(s) 1671, 1980
Tth111I GACNNNGTC 1 cut(s) 38
VpaK11BI GGWCC 1 cut(s) 751
XapI RAATTY 3 cut(s) 1101, 1206, 1553
XceI RCATGY 3 cut(s) 1573, 1856, 1954
XmnI GAANNNNTTC 2 cut(s) 534, 1512
XspI CTAG 4 cut(s) 800, 942, 1919, 1947
ZraI GACGTC 1 cut(s) 40
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.