RLG00000036577

Protein of unknown function (DUF632)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0004521
Physical Location & Seq
Reverse (-)
82088030 .. 82088521
492 bp
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UTR
Exon/CDS
Intron
RLM00000036577

Sequence Viewer

Length: 492 bp
ATGGAATCTCTTTGTTGGTGGCTCTTTCATAACGACAAACCAATAATACTCGGAGACAATGATGGTGATTGGTTGATTAACCTGAAAAATCTGGAAAGTAATACAAAGGAGGTGACTACTCAGATGAAAAGGTTCCAGAAAGATGTTGCAGCCCTATTAGGCCAACAAGGGAAGGAGCATGACCAAAAGATGGAGGTCGAGCGAATTGAGAACGGACTCGAGATTAAGAATCAGATGATTACTCCTGCGAACGAGAAGCAGACCTTGGAGGAGATTGAGGAGTTGAAGGAGAGGATAGAGAGAACTAAAGAGACGCATCAAAGTAAAATGCAGGAGACGCAGCAAATGGTGAATCAATTTCAGACAGGGTTCTCTGATGTTTTCGAAAAGCAAGCGGATTTTTCAAAAAAGCTAACGAAATCTATACTGAGCTTATCAAACACCTGCCAAAAACCCCTCTGGATACGCAAACATAACCATCTTGTAGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF630 DUF632

Protein Analysis

164

Amino Acids

19.2

Weight (kDa)

5.98

Isoelectric Point (pI)

41.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 452
Acc36I ACCTGC 1 cut(s) 452
AccB7I CCANNNNNTGG 1 cut(s) 190
AciI CCGC 1 cut(s) 395
AfiI CCNNNNNNNGG 1 cut(s) 190
AgsI TTSAA 2 cut(s) 286, 405
AjuI GAANNNNNNNTTGG 2 cut(s) 248, 280
AluBI AGCT 2 cut(s) 412, 432
AluI AGCT 2 cut(s) 412, 432
Alw26I GTCTC 3 cut(s) 48, 305, 329
Ama87I CYCGRG 1 cut(s) 218
AoxI GGCC 1 cut(s) 160
ApeKI GCWGC 2 cut(s) 149, 340
Asp700I GAANNNNTTC 1 cut(s) 131
AsuHPI GGTGA 3 cut(s) 77, 124, 361
AsuII TTCGAA 1 cut(s) 384
AvaI CYCGRG 1 cut(s) 218
BbvI GCAGC 2 cut(s) 161, 352
BccI CCATC 3 cut(s) 56, 184, 486
BciVI GTATCC 1 cut(s) 456
BcoDI GTCTC 3 cut(s) 48, 305, 329
BfuAI ACCTGC 1 cut(s) 452
BfuI GTATCC 1 cut(s) 456
BisI GCNGC 2 cut(s) 150, 341
BlsI GCNGC 2 cut(s) 151, 342
BmeT110I CYCGRG 1 cut(s) 218
BmiI GGNNCC 1 cut(s) 134
BmsI GCATC 1 cut(s) 325
Bpu14I TTCGAA 1 cut(s) 384
BsaJI CCNNGG 1 cut(s) 264
Bsc4I CCNNNNNNNGG 1 cut(s) 190
BseDI CCNNGG 1 cut(s) 264
BseLI CCNNNNNNNGG 1 cut(s) 190
BseMII CTCAG 2 cut(s) 134, 419
BseRI GAGGAG 2 cut(s) 284, 293
BseXI GCAGC 2 cut(s) 161, 352
BshFI GGCC 1 cut(s) 162
BsiHKCI CYCGRG 1 cut(s) 218
BslI CCNNNNNNNGG 1 cut(s) 190
BsmAI GTCTC 3 cut(s) 48, 305, 329
BsmBI CGTCTC 2 cut(s) 305, 329
BsnI GGCC 1 cut(s) 162
BsoBI CYCGRG 1 cut(s) 218
Bsp119I TTCGAA 1 cut(s) 384
BspACI CCGC 1 cut(s) 395
BspANI GGCC 1 cut(s) 162
BspCNI CTCAG 2 cut(s) 133, 420
BspLI GGNNCC 1 cut(s) 134
BspMI ACCTGC 1 cut(s) 452
BspT104I TTCGAA 1 cut(s) 384
BssECI CCNNGG 1 cut(s) 264
BssT1I CCWWGG 1 cut(s) 264
BstBI TTCGAA 1 cut(s) 384
BstC8I GCNNGC 1 cut(s) 393
BstDEI CTNAG 2 cut(s) 120, 428
BstMAI GTCTC 3 cut(s) 48, 305, 329
BstMWI GCNNNNNNNGC 1 cut(s) 337
BstV1I GCAGC 2 cut(s) 161, 352
BsuI GTATCC 1 cut(s) 456
BsuRI GGCC 1 cut(s) 162
BveI ACCTGC 1 cut(s) 452
Cac8I GCNNGC 1 cut(s) 393
CseI GACGC 2 cut(s) 322, 346
CviAII CATG 1 cut(s) 179
CviJI RGCY 5 cut(s) 22, 152, 162, 412, 432
CviKI_1 RGCY 5 cut(s) 22, 152, 162, 412, 432
DdeI CTNAG 2 cut(s) 120, 428
Eco130I CCWWGG 1 cut(s) 264
Eco88I CYCGRG 1 cut(s) 218
EcoT14I CCWWGG 1 cut(s) 264
ErhI CCWWGG 1 cut(s) 264
Esp3I CGTCTC 2 cut(s) 305, 329
FaeI CATG 1 cut(s) 182
FaiI YATR 4 cut(s) 30, 180, 425, 474
FalI AAGNNNNNCTT 2 cut(s) 248, 280
FatI CATG 1 cut(s) 178
Fnu4HI GCNGC 2 cut(s) 150, 341
Fsp4HI GCNGC 2 cut(s) 150, 341
GluI GCNGC 2 cut(s) 150, 341
HaeIII GGCC 1 cut(s) 162
HgaI GACGC 2 cut(s) 322, 346
Hin1II CATG 1 cut(s) 182
HinfI GANTC 4 cut(s) 5, 216, 229, 352
HphI GGTGA 3 cut(s) 77, 124, 361
Hpy188I TCNGA 5 cut(s) 53, 123, 234, 363, 376
Hpy188III TCNNGA 4 cut(s) 92, 136, 220, 460
HpyAV CCTTC 2 cut(s) 166, 280
HpyCH4V TGCA 2 cut(s) 149, 331
HpyF10VI GCNNNNNNNGC 1 cut(s) 337
HpyF3I CTNAG 2 cut(s) 120, 428
Hsp92II CATG 1 cut(s) 182
LmnI GCTCC 1 cut(s) 175
LpnPI CCDG 8 cut(s) 77, 95, 149, 258, 317, 351, 445, 457
Lsp1109I GCAGC 2 cut(s) 161, 352
LweI GCATC 1 cut(s) 325
MaeIII GTNAC 1 cut(s) 112
MluCI AATT 2 cut(s) 204, 356
MlyI GAGTC 1 cut(s) 210
MnlI CCTC 6 cut(s) 103, 187, 262, 271, 285, 467
MroXI GAANNNNTTC 1 cut(s) 131
MseI TTAA 2 cut(s) 78, 225
MwoI GCNNNNNNNGC 1 cut(s) 337
NlaIII CATG 1 cut(s) 182
NlaIV GGNNCC 1 cut(s) 134
NmuCI GTSAC 1 cut(s) 112
NspV TTCGAA 1 cut(s) 384
PaeR7I CTCGAG 1 cut(s) 218
PaqCI CACCTGC 1 cut(s) 452
PdmI GAANNNNTTC 1 cut(s) 131
PfeI GAWTC 3 cut(s) 5, 229, 352
PflMI CCANNNNNTGG 1 cut(s) 190
PkrI GCNGC 2 cut(s) 151, 342
PleI GAGTC 1 cut(s) 210
PpsI GAGTC 1 cut(s) 210
PspN4I GGNNCC 1 cut(s) 134
SaqAI TTAA 2 cut(s) 78, 225
SatI GCNGC 2 cut(s) 150, 341
SchI GAGTC 1 cut(s) 210
SetI ASST 8 cut(s) 84, 114, 134, 198, 266, 414, 434, 446
SfaNI GCATC 1 cut(s) 325
Sfr274I CTCGAG 1 cut(s) 218
SfuI TTCGAA 1 cut(s) 384
SlaI CTCGAG 1 cut(s) 218
SmlI CTYRAG 1 cut(s) 218
SmoI CTYRAG 1 cut(s) 218
Sse9I AATT 2 cut(s) 204, 356
SsiI CCGC 1 cut(s) 395
StyI CCWWGG 1 cut(s) 264
TaqI TCGA 3 cut(s) 198, 219, 384
TasI AATT 2 cut(s) 204, 356
TfiI GAWTC 3 cut(s) 5, 229, 352
Tru1I TTAA 2 cut(s) 78, 225
Tru9I TTAA 2 cut(s) 78, 225
TseFI GTSAC 1 cut(s) 112
TseI GCWGC 2 cut(s) 149, 340
Tsp45I GTSAC 1 cut(s) 112
TspDTI ATGAA 2 cut(s) 17, 140
TspGWI ACGGA 1 cut(s) 228
Van91I CCANNNNNTGG 1 cut(s) 190
XhoI CTCGAG 1 cut(s) 218
XmnI GAANNNNTTC 1 cut(s) 131
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.