FvH4_3g42260

Protein of unknown function (DUF632)

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Reverse (-)
35279311 .. 35280852
1542 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g42260.t1

Sequence Viewer

Length: 1542 bp
ATGGGAAATTCTGCTTCACACGATCAAACATCTCTAAGGAAAGCAATATCTCTTTGTAAAGAGAGACAAAAGTTTCTGAATAAGGCTTCAAAGCGAAGGTGTGATCTTGCGGTTGCACACTTGCAGTTTAGTGGCTATCACAAAGAAGTGGCTGACGCCATAAATGCTTTCGTTGGAGAACAGAATCCTGCAACAACGGAACAGAGTCATGCAACAACGGAATATATAGTCGAAATGCCTGAAGATGATGATGACGTTGAGGTTATGGAGGAAGAGGGGGCTTTAAACACAAGGAGGCAAGGGAACAATCATGTGATAGAAGCCCACCAGTTGCCATGGATCACCAACAGTATGCCAGAAGGGAGGGATGTCGACTTGAAATTCTTGCAGGCATTGAAAAGTGTCGAAGAGCAATTTCGATACGCCTATGAGTATGGTAAGGATGTCTCAAAGAAGTTGGAGACAAAGAGTATTGAAAACAAGTCTAAATCATTGCAACCTCCCAAACTCCTCCGCTCACTCTCAAGAAGCAGCAGCTCTAGAGTTCATTCTTTATCTTTCGAAGAATCTGAAATAATGGGTGTAGCACTCACACAACTGAAAGATTGGGAGGAGAAACTCCTGAAGGATTTGAAAAAAGAAAAGGAAGAGGATAAGAGGATCATGAAATCAGATAAGAGCCAAGCCAATGCAGAGGGAGAGGATCATCATACCAAAAAGGTGAATCCACATGTTGAGATTGGCCAGATTTCCAAGGAGAAAGTGAATGAATGGAAAGACAAACGTTTGCTTCCCAGACTAGTTGAGCAGCTAAATGGATTGATGGACTACTGGAAAGCAATGTCACAGTTTTATGGAACCCAAAAGAACAACATGTCAGAAGTAAAAGAATCTCCCCCGATTGGTGAAGACAATCACATAGCATTGCTTTGTGATGACAAGCACCGAGAGGCTACTAAAAAGCTACAAGAAAAGCTTCAGAATTGGCGCCCCAGATTTGCTTCATATATATACCTACAAACAGCATACATTGAAGTTCTTTATTGTTGGCTATCCATGTTAGTTAAAGACAATGATGTTAAAGTTGAAGACAATGATGTTAGAGGGTGGTCAGAACCCCTAAACAATCTGGTAAACAATGCAGAGACGGTGACCAAGGAGATGAAAGAGTTGCAGAAAGATGTTGAAGCCCTACGAGCTCAACAAGGGAAGGAGCATGCTCAAAAGATGAAGTTGAACAACCTTGAGAGCCGGGTCAATTACAGAGAGAATAGGATCCTTAAGGAGGAGATTGATGGGGATGAGAAGCAGAAGTTGGAGGAGGAGATTGGAAAGTTGAAGAAGAGGATAGAGGAAAATAAAAAGACTCATCAAACAAAAAGGAAGGAGACGCAGCAAGCCTTGATTAAATTCAAAACAAGGTTCTTTGAAGTTTTTGAAAAGCTAGAGGCTTTCTCAAAAGCCGCTGCAGGAAATTATGCTAAGCTTATCGACCACCAGCCAAAAACCCGGCCAAGAACCCGTGTGGATGTGCAAAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

514

Amino Acids

59.73

Weight (kDa)

8.05

Isoelectric Point (pI)

50.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF630 PF04783 1 - 58 3.6e-09 Protein of unknown function (DUF630)
DUF632 PF04782 129 - 395 3.8e-22 Protein of unknown function (DUF632)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 987
AccBSI CCGCTC 1 cut(s) 516
AccI GTMKAC 1 cut(s) 372
AciI CCGC 3 cut(s) 110, 514, 1464
AclI AACGTT 1 cut(s) 784
AclWI GGATC 5 cut(s) 347, 668, 711, 1270, 1283
AcoI YGGCCR 2 cut(s) 742, 1511
AcsI RAATTY 3 cut(s) 7, 380, 1409
AcuI CTGAAG 3 cut(s) 261, 644, 962
AcyI GRCGYC 2 cut(s) 156, 988
AfiI CCNNNNNNNGG 2 cut(s) 902, 1285
AflII CTTAAG 1 cut(s) 1280
AflIII ACRYGT 2 cut(s) 730, 873
AhlI ACTAGT 1 cut(s) 799
AjuI GAANNNNNNNTTGG 2 cut(s) 1298, 1330
AluBI AGCT 7 cut(s) 537, 811, 964, 976, 1199, 1444, 1486
AluI AGCT 7 cut(s) 537, 811, 964, 976, 1199, 1444, 1486
Alw21I GWGCWC 1 cut(s) 1201
Alw26I GTCTC 5 cut(s) 58, 451, 455, 1139, 1382
AlwI GGATC 5 cut(s) 347, 668, 711, 1270, 1283
AoxI GGCC 2 cut(s) 742, 1511
ApeKI GCWGC 5 cut(s) 531, 534, 808, 1393, 1466
ApoI RAATTY 3 cut(s) 7, 380, 1409
Asp700I GAANNNNTTC 1 cut(s) 975
AspLEI GCGC 1 cut(s) 990
AsuC2I CCSGG 2 cut(s) 1253, 1510
AsuHPI GGTGA 4 cut(s) 334, 733, 917, 1162
AsuII TTCGAA 1 cut(s) 561
BalI TGGCCA 1 cut(s) 744
BamHI GGATCC 1 cut(s) 1275
BanI GGYRCC 1 cut(s) 987
BanII GRGCYC 1 cut(s) 1201
BbsI GAAGAC 2 cut(s) 915, 1095
Bbv12I GWGCWC 1 cut(s) 1201
BbvI GCAGC 5 cut(s) 543, 546, 820, 1405, 1453
BccI CCATC 2 cut(s) 817, 1289
BcnI CCSGG 2 cut(s) 1253, 1510
BcoDI GTCTC 5 cut(s) 58, 451, 455, 1139, 1382
BcuI ACTAGT 1 cut(s) 799
BfaI CTAG 3 cut(s) 540, 800, 1445
BfmI CTRYAG 1 cut(s) 1467
BfoI RGCGCY 1 cut(s) 991
BfrI CTTAAG 1 cut(s) 1280
BisI GCNGC 6 cut(s) 532, 535, 809, 1394, 1464, 1467
BlpI GCTNAGC 1 cut(s) 1482
BlsI GCNGC 6 cut(s) 533, 536, 810, 1395, 1465, 1468
Bme1390I CCNGG 2 cut(s) 1253, 1510
BmiI GGNNCC 3 cut(s) 859, 989, 1277
BmrFI CCNGG 2 cut(s) 1253, 1510
BpiI GAAGAC 2 cut(s) 915, 1095
BplI GAGNNNNNCTC 2 cut(s) 1439, 1471
Bpu1102I GCTNAGC 1 cut(s) 1482
Bpu14I TTCGAA 1 cut(s) 561
BpuEI CTTGAG 2 cut(s) 508, 1265
BpuMI CCSGG 2 cut(s) 1253, 1510
BsaHI GRCGYC 2 cut(s) 156, 988
BsaJI CCNNGG 3 cut(s) 335, 753, 1155
Bsc4I CCNNNNNNNGG 2 cut(s) 902, 1285
Bse1I ACTGG 2 cut(s) 328, 836
Bse3DI GCAATG 3 cut(s) 491, 846, 923
BseDI CCNNGG 3 cut(s) 335, 753, 1155
BseGI GGATG 4 cut(s) 373, 448, 1306, 1534
BseLI CCNNNNNNNGG 2 cut(s) 902, 1285
BseMI GCAATG 3 cut(s) 491, 846, 923
BseNI ACTGG 2 cut(s) 328, 836
BseRI GAGGAG 5 cut(s) 500, 626, 1301, 1334, 1337
BseXI GCAGC 5 cut(s) 543, 546, 820, 1405, 1453
BshFI GGCC 2 cut(s) 744, 1513
BshNI GGYRCC 1 cut(s) 987
BsiHKAI GWGCWC 1 cut(s) 1201
BsiSI CCGG 2 cut(s) 1252, 1510
BslI CCNNNNNNNGG 2 cut(s) 902, 1285
BsmAI GTCTC 5 cut(s) 58, 451, 455, 1139, 1382
BsmBI CGTCTC 2 cut(s) 1139, 1382
BsnI GGCC 2 cut(s) 744, 1513
Bsp119I TTCGAA 1 cut(s) 561
Bsp1286I GDGCHC 1 cut(s) 1201
Bsp143I GATC 6 cut(s) 22, 103, 339, 660, 703, 1275
Bsp1720I GCTNAGC 1 cut(s) 1482
Bsp19I CCATGG 1 cut(s) 335
BspACI CCGC 3 cut(s) 110, 514, 1464
BspANI GGCC 2 cut(s) 744, 1513
BspHI TCATGA 1 cut(s) 663
BspLI GGNNCC 3 cut(s) 859, 989, 1277
BspMAI CTGCAG 1 cut(s) 1471
BspPI GGATC 5 cut(s) 347, 668, 711, 1270, 1283
BspQI GCTCTTC 1 cut(s) 402
BspT104I TTCGAA 1 cut(s) 561
BspT107I GGYRCC 1 cut(s) 987
BspTI CTTAAG 1 cut(s) 1280
BsrBI CCGCTC 1 cut(s) 516
BsrDI GCAATG 3 cut(s) 491, 846, 923
BsrI ACTGG 2 cut(s) 328, 836
BssECI CCNNGG 3 cut(s) 335, 753, 1155
BssMI GATC 6 cut(s) 22, 103, 339, 660, 703, 1275
BssNI GRCGYC 2 cut(s) 156, 988
BssT1I CCWWGG 3 cut(s) 335, 753, 1155
Bst4CI ACNGT 3 cut(s) 350, 849, 1150
Bst6I CTCTTC 4 cut(s) 267, 402, 642, 1337
BstACI GRCGYC 2 cut(s) 156, 988
BstAFI CTTAAG 1 cut(s) 1280
BstBI TTCGAA 1 cut(s) 561
BstC8I GCNNGC 3 cut(s) 390, 1218, 1398
BstDEI CTNAG 2 cut(s) 35, 1482
BstDSI CCRYGG 1 cut(s) 335
BstEII GGTNACC 1 cut(s) 1150
BstENI CCTNNNNNAGG 1 cut(s) 1283
BstF5I GGATG 4 cut(s) 373, 448, 1306, 1534
BstH2I RGCGCY 1 cut(s) 991
BstHHI GCGC 1 cut(s) 990
BstKTI GATC 6 cut(s) 25, 106, 342, 663, 706, 1278
BstMAI GTCTC 5 cut(s) 58, 451, 455, 1139, 1382
BstMBI GATC 6 cut(s) 22, 103, 339, 660, 703, 1275
BstMWI GCNNNNNNNGC 2 cut(s) 164, 1196
BstNSI RCATGY 3 cut(s) 734, 877, 1220
BstPI GGTNACC 1 cut(s) 1150
BstSCI CCNGG 2 cut(s) 1251, 1508
BstSFI CTRYAG 1 cut(s) 1467
BstV1I GCAGC 5 cut(s) 543, 546, 820, 1405, 1453
BstV2I GAAGAC 2 cut(s) 915, 1095
BstX2I RGATCY 1 cut(s) 1275
BstYI RGATCY 1 cut(s) 1275
BsuRI GGCC 2 cut(s) 744, 1513
BtgI CCRYGG 1 cut(s) 335
BtsCI GGATG 4 cut(s) 373, 448, 1306, 1534
Cac8I GCNNGC 3 cut(s) 390, 1218, 1398
CciI TCATGA 1 cut(s) 663
CfoI GCGC 1 cut(s) 990
CseI GACGC 2 cut(s) 164, 1399
CviAII CATG 8 cut(s) 209, 311, 336, 664, 731, 874, 1057, 1217
DdeI CTNAG 2 cut(s) 35, 1482
DinI GGCGCC 1 cut(s) 989
DpnI GATC 6 cut(s) 24, 105, 341, 662, 705, 1277
DpnII GATC 6 cut(s) 22, 103, 339, 660, 703, 1275
DraI TTTAAA 1 cut(s) 285
EaeI YGGCCR 2 cut(s) 742, 1511
Eam1104I CTCTTC 4 cut(s) 267, 402, 642, 1337
EarI CTCTTC 4 cut(s) 267, 402, 642, 1337
Ecl136II GAGCTC 1 cut(s) 1199
Eco130I CCWWGG 3 cut(s) 335, 753, 1155
Eco24I GRGCYC 1 cut(s) 1201
Eco53kI GAGCTC 1 cut(s) 1199
Eco57I CTGAAG 3 cut(s) 261, 644, 962
Eco91I GGTNACC 1 cut(s) 1150
EcoICRI GAGCTC 1 cut(s) 1199
EcoNI CCTNNNNNAGG 1 cut(s) 1283
EcoO65I GGTNACC 1 cut(s) 1150
EcoT14I CCWWGG 3 cut(s) 335, 753, 1155
EcoT38I GRGCYC 1 cut(s) 1201
EgeI GGCGCC 1 cut(s) 989
EheI GGCGCC 1 cut(s) 989
ErhI CCWWGG 3 cut(s) 335, 753, 1155
Esp3I CGTCTC 2 cut(s) 1139, 1382
FaeI CATG 8 cut(s) 212, 314, 339, 667, 734, 877, 1060, 1220
FalI AAGNNNNNCTT 2 cut(s) 960, 992
FatI CATG 8 cut(s) 208, 310, 335, 663, 730, 873, 1056, 1216
FblI GTMKAC 1 cut(s) 372
Fnu4HI GCNGC 6 cut(s) 532, 535, 809, 1394, 1464, 1467
FokI GGATG 3 cut(s) 380, 455, 1313
FriOI GRGCYC 1 cut(s) 1201
Fsp4HI GCNGC 6 cut(s) 532, 535, 809, 1394, 1464, 1467
FspBI CTAG 3 cut(s) 540, 800, 1445
GlaI GCGC 1 cut(s) 989
GluI GCNGC 6 cut(s) 532, 535, 809, 1394, 1464, 1467
HaeII RGCGCY 1 cut(s) 991
HaeIII GGCC 2 cut(s) 744, 1513
HapII CCGG 2 cut(s) 1252, 1510
HgaI GACGC 2 cut(s) 164, 1399
HhaI GCGC 1 cut(s) 990
Hin1I GRCGYC 2 cut(s) 156, 988
Hin1II CATG 8 cut(s) 212, 314, 339, 667, 734, 877, 1060, 1220
Hin6I GCGC 1 cut(s) 988
HinP1I GCGC 1 cut(s) 988
HincII GTYRAC 1 cut(s) 373
HindII GTYRAC 1 cut(s) 373
HindIII AAGCTT 2 cut(s) 974, 1484
HinfI GANTC 6 cut(s) 184, 205, 566, 724, 890, 1366
HpaII CCGG 2 cut(s) 1252, 1510
HphI GGTGA 4 cut(s) 334, 733, 917, 1162
Hpy166II GTNNAC 2 cut(s) 373, 1135
Hpy188I TCNGA 6 cut(s) 78, 571, 673, 880, 981, 1114
Hpy188III TCNNGA 4 cut(s) 525, 540, 622, 664
Hpy8I GTNNAC 2 cut(s) 373, 1135
HpyAV CCTTC 5 cut(s) 90, 353, 619, 1204, 1378
HpyCH4III ACNGT 3 cut(s) 350, 849, 1150
HpyCH4IV ACGT 2 cut(s) 255, 784
HpyF10VI GCNNNNNNNGC 2 cut(s) 164, 1196
HpyF3I CTNAG 2 cut(s) 35, 1482
HpySE526I ACGT 2 cut(s) 255, 784
Hsp92I GRCGYC 2 cut(s) 156, 988
Hsp92II CATG 8 cut(s) 212, 314, 339, 667, 734, 877, 1060, 1220
HspAI GCGC 1 cut(s) 988
KasI GGCGCC 1 cut(s) 987
Kzo9I GATC 6 cut(s) 22, 103, 339, 660, 703, 1275
LguI GCTCTTC 1 cut(s) 402
LmnI GCTCC 1 cut(s) 1213
Lsp1109I GCAGC 5 cut(s) 543, 546, 820, 1405, 1453
MaeI CTAG 3 cut(s) 540, 800, 1445
MaeII ACGT 2 cut(s) 255, 784
MaeIII GTNAC 2 cut(s) 843, 1150
MalI GATC 6 cut(s) 24, 105, 341, 662, 705, 1277
MbiI CCGCTC 1 cut(s) 516
MboI GATC 6 cut(s) 22, 103, 339, 660, 703, 1275
MboII GAAGA 9 cut(s) 254, 284, 419, 575, 659, 920, 1100, 1351, 1354
MflI RGATCY 1 cut(s) 1275
MhlI GDGCHC 1 cut(s) 1201
MlsI TGGCCA 1 cut(s) 744
MluCI AATT 7 cut(s) 7, 380, 413, 982, 1258, 1409, 1474
MluNI TGGCCA 1 cut(s) 744
Mly113I GGCGCC 1 cut(s) 988
MlyI GAGTC 2 cut(s) 214, 1360
MmeI TCCRAC 3 cut(s) 154, 438, 1296
Mox20I TGGCCA 1 cut(s) 744
MroXI GAANNNNTTC 1 cut(s) 975
MscI TGGCCA 1 cut(s) 744
MseI TTAA 5 cut(s) 284, 1065, 1080, 1281, 1407
Msp20I TGGCCA 1 cut(s) 744
MspA1I CMGCKG 1 cut(s) 1466
MspCI CTTAAG 1 cut(s) 1280
MspI CCGG 2 cut(s) 1252, 1510
MspR9I CCNGG 2 cut(s) 1253, 1510
MwoI GCNNNNNNNGC 2 cut(s) 164, 1196
NarI GGCGCC 1 cut(s) 988
NciI CCSGG 2 cut(s) 1253, 1510
NcoI CCATGG 1 cut(s) 335
NdeII GATC 6 cut(s) 22, 103, 339, 660, 703, 1275
NlaIII CATG 8 cut(s) 212, 314, 339, 667, 734, 877, 1060, 1220
NlaIV GGNNCC 3 cut(s) 859, 989, 1277
NmuCI GTSAC 2 cut(s) 843, 1150
NspI RCATGY 3 cut(s) 734, 877, 1220
NspV TTCGAA 1 cut(s) 561
PaeI GCATGC 1 cut(s) 1220
PagI TCATGA 1 cut(s) 663
PciI ACATGT 2 cut(s) 730, 873
PciSI GCTCTTC 1 cut(s) 402
PdmI GAANNNNTTC 1 cut(s) 975
PfeI GAWTC 4 cut(s) 184, 566, 724, 890
PkrI GCNGC 6 cut(s) 533, 536, 810, 1395, 1465, 1468
PleI GAGTC 2 cut(s) 213, 1360
PluTI GGCGCC 1 cut(s) 991
PpsI GAGTC 2 cut(s) 213, 1360
PscI ACATGT 2 cut(s) 730, 873
Psp124BI GAGCTC 1 cut(s) 1201
Psp1406I AACGTT 1 cut(s) 784
PspEI GGTNACC 1 cut(s) 1150
PspN4I GGNNCC 3 cut(s) 859, 989, 1277
PstI CTGCAG 1 cut(s) 1471
PsuI RGATCY 1 cut(s) 1275
SacI GAGCTC 1 cut(s) 1201
SalI GTCGAC 1 cut(s) 371
SapI GCTCTTC 1 cut(s) 402
SaqAI TTAA 5 cut(s) 284, 1065, 1080, 1281, 1407
SatI GCNGC 6 cut(s) 532, 535, 809, 1394, 1464, 1467
Sau3AI GATC 6 cut(s) 22, 103, 339, 660, 703, 1275
SchI GAGTC 2 cut(s) 214, 1360
ScrFI CCNGG 2 cut(s) 1253, 1510
SduI GDGCHC 1 cut(s) 1201
SfcI CTRYAG 1 cut(s) 1467
SfoI GGCGCC 1 cut(s) 989
SfuI TTCGAA 1 cut(s) 561
SmlI CTYRAG 3 cut(s) 523, 1244, 1280
SmoI CTYRAG 3 cut(s) 523, 1244, 1280
SpeI ACTAGT 1 cut(s) 799
SphI GCATGC 1 cut(s) 1220
Sse9I AATT 7 cut(s) 7, 380, 413, 982, 1258, 1409, 1474
SsiI CCGC 3 cut(s) 110, 514, 1464
SspDI GGCGCC 1 cut(s) 987
SspMI CTAG 3 cut(s) 540, 800, 1445
SstI GAGCTC 1 cut(s) 1201
StyD4I CCNGG 2 cut(s) 1251, 1508
StyI CCWWGG 3 cut(s) 335, 753, 1155
TaaI ACNGT 3 cut(s) 350, 849, 1150
TaiI ACGT 2 cut(s) 258, 787
TaqI TCGA 6 cut(s) 231, 372, 405, 418, 561, 1491
TasI AATT 7 cut(s) 7, 380, 413, 982, 1258, 1409, 1474
TauI GCSGC 1 cut(s) 1466
TfiI GAWTC 4 cut(s) 184, 566, 724, 890
Tru1I TTAA 5 cut(s) 284, 1065, 1080, 1281, 1407
Tru9I TTAA 5 cut(s) 284, 1065, 1080, 1281, 1407
TseFI GTSAC 2 cut(s) 843, 1150
TseI GCWGC 5 cut(s) 531, 534, 808, 1393, 1466
Tsp45I GTSAC 2 cut(s) 843, 1150
TspDTI ATGAA 6 cut(s) 536, 680, 783, 993, 1178, 1244
TspGWI ACGGA 2 cut(s) 212, 233
Vha464I CTTAAG 1 cut(s) 1280
XagI CCTNNNNNAGG 1 cut(s) 1283
XapI RAATTY 3 cut(s) 7, 380, 1409
XbaI TCTAGA 1 cut(s) 539
XceI RCATGY 3 cut(s) 734, 877, 1220
XmiI GTMKAC 1 cut(s) 372
XmnI GAANNNNTTC 1 cut(s) 975
XspI CTAG 3 cut(s) 540, 800, 1445
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.