Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0002173

Physical Location & Seq

Genomic Coordinates Forward (+)

6253034 .. 6259555

Gene Structure 6522 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g11470.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1809 bp

ATGGGTAAGCGGAGCTCTCTGGTAGTCTTGTCGTCGGATGACGACGAGGCCGATCGTTCTCTGAGCTCCAATCGGAGAAGTACAAGATCGTCGGCGACGAGGTTGGTCTCTACGGCGCCGGCGAAAAACCCCGGGCGAGCGAAGAAGGCTCGGGGTTTGAGCTCTCGCTCTAGCTTGGGCTCAGTGTCCACTGATTGGGATGATGTTAGATTGTCGTTTGGAGATTTTGATGAAGAGTCCAAGGTACCTGCTGGTTTTAGAAGGAGGAATTCAAAGGAGTTATGGGTTGAGAAATACAAACCTTGTTCCTTTGAGGAGCTCGCTGTTCACAAGAAAAAGGTTGAAGAAGTTAAGGGCTGGTTCGAAGAAAGATTAACAAATTCAAAGGGTAAATCTTCTAATCATGCTCTTGTCATCACTGGGCAAGCTGGAGTTGGAAAATCTGCAACTATTCATGTGATTGCATCTCAACTTGCTGCTACATTGTGTGAATGGAGCACGCCAACTCCAGTAGTTTGGCAAGAACATTTATATAACTCTAGTACAGGAGTACAATACATGTCCAAGTTGGAGGAATTTGAAAATTTTGTGGAGAGAGTACGGAAGTATGGTTTGATTCCATCATCCCTTAGTGAGGGTTCAAAAGCATCAATTATACTCGTAATTGACGACCTTCCGGTGACAAATGGTAAAGTTGCTTTTCAAAGACTTCAAAACTGTTTGCGTCTTCTTGTGCAAACAACTTGTACACCAACTGCTATATTGATCACCGACCGTGGTAAAGCTGATTCCGAAGATCAGACTGCTGGATACTTGGATGAACTTCCGTTGTCTCTTCAAAGTGCTGGGGCCTGTAAGGTCTCCTTCAATCCTATAACTTCTAATTCCATCAAAAAAGTACTGTCTAGAATATGTAAAGAAGAGCAGTGTAATGTGACTGCTGAACAGGTTGATCTAATTGCAAAAGCAAGTGGAGGTGACATAAGAAATGCAATTACATCTTTACAGTTCTTCTATTTGAAACCAACTCCCATGCATTTGCTTCCTTCATCAATTACTCCTCCCAGGTTTGGTAAAGGGAAACAAGCACCCTTGTATGCTAAAGGAAAACCAGATATGGATAATGGTTATTCCTTACTTTTTGGAAGAGATGATACACTTTCTCTATTCCATGCCCTTGGGAAGTTTCTGCATAACAAAAGAGAGACTGAAGATATCATGGAATTGGATGGAGCTGCATTTCACGTGCGAGAAGATTTGTCTAGACTACCACTGAAAATGGATGCTCCGGAAAAGATTCTTTGTCAAGCTCATGGACAAGCTAGGCCAATTGCGGATTTTCTACATGAAAATGTTCTGGATTTCCTGAGTGAGGAGGCAATGGATGATTCCTGGTCAGTTGCTTCATATTTAAGTGATGCTGACTTGCTTCTTGCTACCTTCCGCGGAATGTTAAGTAGGCAGTATGAGGCAGAGAATGTTCTACAGTCGGCCGGTGCTTCAGTTGCAGTTCGTGGTGTGCTATTTGGAAATAATCATCCATTGCCGTCCAGGTGGCATGCTGTTCGGCGGCCCAAGCTCTGGCAGGTTGAGAAGTCATCATTTTACAACAAGAAGGAGATGGTAAATCAGAGATTCAGTGCTTATAATGGAATGTGTTCATCAGATTTGACGGTTATAGCTACCGAGTACATGCCTGCATTTAAATGGCTTGGATTTAGGGCACAGGGAGGTCTTGAAGAGAATGTCGAAAGGATGAGTTTGGGTGATCAAGACAGCGAAGTTGAGGACGATATAGAAGATTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000075 GO:0000076 GO:0000077 GO:0000228 GO:0000278 GO:0000785 GO:0000790 GO:0003674 GO:0003682 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006282 GO:0006950 GO:0006974 GO:0007049 GO:0007093 GO:0007346 GO:0008150 GO:0009987 GO:0010389 GO:0010564 GO:0010948 GO:0010972 GO:0019219 GO:0019222 GO:0022402 GO:0031323 GO:0031347 GO:0031570 GO:0031974 GO:0031981 GO:0033314 GO:0033554 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0044774 GO:0044818 GO:0045786 GO:0045930 GO:0048519 GO:0048523 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051171 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0070013 GO:0080090 GO:0080134 GO:0080135 GO:1901987 GO:1901988 GO:1901990 GO:1901991 GO:1902749 GO:1902750 GO:1903047 GO:2001020

KEGG Pathways

Metabolic & Signaling

ko04111 ko04113 map04111 map04113

Pfam Domains

Protein Families

Myb_DNA-bind_3 Rad17

Protein Analysis

603

Amino Acids

66.93

Weight (kDa)

6.36

Isoelectric Point (pI)

49.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rad17	PF03215	90 - 258	1.9e-23	Rad17 P-loop domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002173)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G66130 AT5G66130
fragaria_vesca	FvH4_1g11470 FvH4_1g11471
malus_domestica	MD15G1242700.v1.1
prunus_persica	Prupe.7G171400_v2.0.a1 Prupe.7G171400_v2.0.a1 Prupe.7G171400_v2.0.a1 Prupe.7G171400_v2.0.a1 Prupe.7G171400_v2.0.a1 Prupe.7G171400_v2.0.a1 Prupe.7G171400_v2.0.a1 Prupe.7G171400_v2.0.a1 Prupe.7G171400_v2.0.a1 Prupe.7G171500_v2.0.a1
pyrus_communis	pycom15g21390
rosa_chinensis	RchiOBHm_Chr2g0099051 RchiOBHm_Chr2g0099061
rosa_laevigata	RLG00000016842
rosa_multiflora	Rmu_co8335887.1_g000001 Rmu_sc0000577.1_g000020 Rmu_sc0012098.1_g000008 Rmu_sc0015712.1_g000001 Rmu_sc0025811.1_g000001
rosa_roxburghii	Rroxscaffold_2G00143470
rosa_rugosa	Rorug02G0076000 Rorug02G0076100 Rorug02G0076100 Rorug02G0076200 Rorug02G0076300 Rorug02G0076400
rosa_samantha	Rh2AG125300 Rh2AG125400 Rh2BG128500 Rh2BG128600 Rh2BG128700 Rh2CG129500 Rh2CG129600 Rh2CG129700 Rh2DG129800 Rh2DG129900
rosa_wichuraiana	Rw2G009650 Rw2G009660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1647
Acc36I	ACCTGC	2 cut(s)	256, 1576
Acc65I	GGTACC	1 cut(s)	244
AccB1I	GGYRCC	2 cut(s)	115, 244
AccB7I	CCANNNNNTGG	2 cut(s)	195, 1581
AccII	CGCG	1 cut(s)	1446
AccIII	TCCGGA	1 cut(s)	1288
AciI	CCGC	5 cut(s)	10, 1334, 1444, 1446, 1570
AcoI	YGGCCR	1 cut(s)	1491
AcsI	RAATTY	4 cut(s)	268, 379, 575, 583
AcuI	CTGAAG	2 cut(s)	1230, 1485
AcvI	CACGTG	1 cut(s)	1246
AcyI	GRCGYC	1 cut(s)	116
AfaI	GTAC	8 cut(s)	82, 246, 544, 552, 600, 748, 900, 1691
AfiI	CCNNNNNNNGG	5 cut(s)	195, 634, 1070, 1372, 1581
AflIII	ACRYGT	1 cut(s)	558
AjnI	CCWGG	3 cut(s)	1064, 1391, 1550
Alw21I	GWGCWC	5 cut(s)	17, 68, 164, 321, 500
Alw26I	GTCTC	4 cut(s)	112, 837, 865, 1199
Ama87I	CYCGRG	2 cut(s)	131, 150
Aor13HI	TCCGGA	1 cut(s)	1288
AoxI	GGCC	5 cut(s)	48, 849, 1325, 1491, 1571
ApeKI	GCWGC	2 cut(s)	476, 1235
ApoI	RAATTY	4 cut(s)	268, 379, 575, 583
Asp700I	GAANNNNTTC	3 cut(s)	1296, 1353, 1657
Asp718I	GGTACC	1 cut(s)	244
AspLEI	GCGC	1 cut(s)	118
AspS9I	GGNCC	2 cut(s)	849, 1572
AsuC2I	CCSGG	2 cut(s)	132, 133
AsuHPI	GGTGA	4 cut(s)	691, 760, 989, 1778
AsuII	TTCGAA	1 cut(s)	363
AvaI	CYCGRG	2 cut(s)	131, 150
BaeGI	GKGCMC	1 cut(s)	1726
BanI	GGYRCC	2 cut(s)	115, 244
BanII	GRGCYC	5 cut(s)	17, 68, 164, 182, 321
BarI	GAAGNNNNNNTAC	2 cut(s)	1138, 1170
BbrPI	CACGTG	1 cut(s)	1246
BbsI	GAAGAC	1 cut(s)	719
Bbv12I	GWGCWC	5 cut(s)	17, 68, 164, 321, 500
BbvI	GCAGC	2 cut(s)	463, 1222
BccI	CCATC	4 cut(s)	628, 896, 1223, 1615
BceAI	ACGGC	2 cut(s)	129, 1531
BcgI	CGANNNNNNTGC	2 cut(s)	1547, 1581
BciT130I	CCWGG	3 cut(s)	1066, 1393, 1552
BciVI	GTATCC	1 cut(s)	803
BclI	TGATCA	2 cut(s)	765, 1768
BcnI	CCSGG	2 cut(s)	132, 133
BcoDI	GTCTC	4 cut(s)	112, 837, 865, 1199
BfaI	CTAG	5 cut(s)	171, 540, 906, 1263, 1323
BfmI	CTRYAG	1 cut(s)	1484
BfoI	RGCGCY	1 cut(s)	119
BfuAI	ACCTGC	2 cut(s)	256, 1576
BfuI	GTATCC	1 cut(s)	803
BisI	GCNGC	3 cut(s)	477, 1236, 1571
BlsI	GCNGC	3 cut(s)	478, 1237, 1572
BmcAI	AGTACT	1 cut(s)	900
Bme1390I	CCNGG	5 cut(s)	132, 133, 1066, 1393, 1552
BmeT110I	CYCGRG	2 cut(s)	131, 150
BmgT120I	GGNCC	2 cut(s)	849, 1572
BmiI	GGNNCC	3 cut(s)	117, 246, 850
BmrFI	CCNGG	5 cut(s)	132, 133, 1066, 1393, 1552
BmrI	ACTGGG	1 cut(s)	429
BmsI	GCATC	4 cut(s)	473, 656, 1273, 1408
BmuI	ACTGGG	1 cut(s)	429
BpiI	GAAGAC	1 cut(s)	719
BpmI	CTGGAG	2 cut(s)	450, 492
Bpu14I	TTCGAA	1 cut(s)	363
BpuMI	CCSGG	2 cut(s)	132, 133
BsaAI	YACGTR	1 cut(s)	1246
BsaHI	GRCGYC	1 cut(s)	116
BsaI	GGTCTC	2 cut(s)	112, 865
BsaJI	CCNNGG	7 cut(s)	130, 131, 240, 775, 1064, 1177, 1444
BsaWI	WCCGGW	2 cut(s)	676, 1288
BsaXI	ACNNNNNCTCC	2 cut(s)	490, 520
Bsc4I	CCNNNNNNNGG	5 cut(s)	195, 634, 1070, 1372, 1581
Bse118I	RCCGGY	2 cut(s)	118, 1493
Bse1I	ACTGG	2 cut(s)	424, 509
Bse3DI	GCAATG	2 cut(s)	1386, 1541
BseAI	TCCGGA	1 cut(s)	1288
BseBI	CCWGG	3 cut(s)	1066, 1393, 1552
BseDI	CCNNGG	7 cut(s)	130, 131, 240, 775, 1064, 1177, 1444
BseGI	GGATG	9 cut(s)	43, 205, 623, 823, 1234, 1288, 1390, 1537, 1761
BseLI	CCNNNNNNNGG	5 cut(s)	195, 634, 1070, 1372, 1581
BseMI	GCAATG	2 cut(s)	1386, 1541
BseMII	CTCAG	3 cut(s)	53, 195, 1358
BseNI	ACTGG	2 cut(s)	424, 509
BseRI	GAGGAG	3 cut(s)	329, 1050, 1388
BseSI	GKGCMC	1 cut(s)	1726
BseX3I	CGGCCG	1 cut(s)	1491
BseXI	GCAGC	2 cut(s)	463, 1222
BseYI	CCCAGC	1 cut(s)	845
Bsh1236I	CGCG	1 cut(s)	1446
Bsh1285I	CGRYCG	3 cut(s)	55, 775, 1494
BshFI	GGCC	5 cut(s)	50, 851, 1327, 1493, 1573
BshNI	GGYRCC	2 cut(s)	115, 244
BsiEI	CGRYCG	3 cut(s)	55, 775, 1494
BsiHKAI	GWGCWC	5 cut(s)	17, 68, 164, 321, 500
BsiHKCI	CYCGRG	2 cut(s)	131, 150
BsiSI	CCGG	5 cut(s)	119, 132, 677, 1289, 1494
BslI	CCNNNNNNNGG	5 cut(s)	195, 634, 1070, 1372, 1581
BsmAI	GTCTC	4 cut(s)	112, 837, 865, 1199
BsnI	GGCC	5 cut(s)	50, 851, 1327, 1493, 1573
Bso31I	GGTCTC	2 cut(s)	112, 865
BsoBI	CYCGRG	2 cut(s)	131, 150
Bsp119I	TTCGAA	1 cut(s)	363
Bsp1286I	GDGCHC	7 cut(s)	17, 68, 164, 182, 321, 500, 1726
Bsp13I	TCCGGA	1 cut(s)	1288
Bsp1407I	TGTACA	1 cut(s)	746
Bsp143I	GATC	6 cut(s)	52, 86, 765, 796, 952, 1768
BspACI	CCGC	5 cut(s)	10, 1334, 1444, 1446, 1570
BspANI	GGCC	5 cut(s)	50, 851, 1327, 1493, 1573
BspCNI	CTCAG	3 cut(s)	54, 194, 1359
BspEI	TCCGGA	1 cut(s)	1288
BspFNI	CGCG	1 cut(s)	1446
BspLI	GGNNCC	3 cut(s)	117, 246, 850
BspMI	ACCTGC	2 cut(s)	256, 1576
BspQI	GCTCTTC	1 cut(s)	915
BspT104I	TTCGAA	1 cut(s)	363
BspT107I	GGYRCC	2 cut(s)	115, 244
BspTNI	GGTCTC	2 cut(s)	112, 865
BsrDI	GCAATG	2 cut(s)	1386, 1541
BsrFI	RCCGGY	2 cut(s)	118, 1493
BsrGI	TGTACA	1 cut(s)	746
BsrI	ACTGG	2 cut(s)	424, 509
BssAI	RCCGGY	2 cut(s)	118, 1493
BssECI	CCNNGG	7 cut(s)	130, 131, 240, 775, 1064, 1177, 1444
BssMI	GATC	6 cut(s)	52, 86, 765, 796, 952, 1768
BssNI	GRCGYC	1 cut(s)	116
BssT1I	CCWWGG	2 cut(s)	240, 1177
Bst2UI	CCWGG	3 cut(s)	1066, 1393, 1552
Bst4CI	ACNGT	6 cut(s)	719, 776, 903, 1008, 1488, 1675
Bst6I	CTCTTC	5 cut(s)	228, 840, 915, 1141, 1734
BstACI	GRCGYC	1 cut(s)	116
BstAUI	TGTACA	1 cut(s)	746
BstBAI	YACGTR	1 cut(s)	1246
BstBI	TTCGAA	1 cut(s)	363
BstC8I	GCNNGC	7 cut(s)	120, 138, 321, 426, 500, 1560, 1698
BstDEI	CTNAG	4 cut(s)	62, 181, 629, 1367
BstDSI	CCRYGG	2 cut(s)	775, 1444
BstENI	CCTNNNNNAGG	2 cut(s)	632, 1370
BstF5I	GGATG	9 cut(s)	43, 205, 623, 823, 1234, 1288, 1390, 1537, 1761
BstFNI	CGCG	1 cut(s)	1446
BstH2I	RGCGCY	1 cut(s)	119
BstHHI	GCGC	1 cut(s)	118
BstKTI	GATC	6 cut(s)	55, 89, 768, 799, 955, 1771
BstMAI	GTCTC	4 cut(s)	112, 837, 865, 1199
BstMBI	GATC	6 cut(s)	52, 86, 765, 796, 952, 1768
BstMCI	CGRYCG	3 cut(s)	55, 775, 1494
BstMWI	GCNNNNNNNGC	3 cut(s)	146, 1505, 1576
BstNI	CCWGG	3 cut(s)	1066, 1393, 1552
BstNSI	RCATGY	3 cut(s)	562, 1562, 1696
BstSCI	CCNGG	5 cut(s)	130, 131, 1064, 1391, 1550
BstSFI	CTRYAG	1 cut(s)	1484
BstSLI	GKGCMC	1 cut(s)	1726
BstUI	CGCG	1 cut(s)	1446
BstV1I	GCAGC	2 cut(s)	463, 1222
BstV2I	GAAGAC	1 cut(s)	719
BstXI	CCANNNNNNTGG	2 cut(s)	516, 1178
BstZI	CGGCCG	1 cut(s)	1491
BsuI	GTATCC	1 cut(s)	803
BsuRI	GGCC	5 cut(s)	50, 851, 1327, 1493, 1573
BtgI	CCRYGG	2 cut(s)	775, 1444
BtsCI	GGATG	9 cut(s)	43, 205, 623, 823, 1234, 1288, 1390, 1537, 1761
BtsI	GCAGTG	1 cut(s)	932
BtsIMutI	CAGTG	6 cut(s)	189, 189, 417, 932, 1271, 1645
BveI	ACCTGC	2 cut(s)	256, 1576
Cac8I	GCNNGC	7 cut(s)	120, 138, 321, 426, 500, 1560, 1698
CfoI	GCGC	1 cut(s)	118
Cfr10I	RCCGGY	2 cut(s)	118, 1493
Cfr13I	GGNCC	2 cut(s)	849, 1572
Cfr42I	CCGCGG	1 cut(s)	1447
Cfr9I	CCCGGG	1 cut(s)	131
CseI	GACGC	1 cut(s)	713
Csp6I	GTAC	8 cut(s)	81, 245, 543, 551, 599, 747, 899, 1690
CviQI	GTAC	8 cut(s)	81, 245, 543, 551, 599, 747, 899, 1690
DdeI	CTNAG	4 cut(s)	62, 181, 629, 1367
DinI	GGCGCC	1 cut(s)	117
DpnI	GATC	6 cut(s)	54, 88, 767, 798, 954, 1770
DpnII	GATC	6 cut(s)	52, 86, 765, 796, 952, 1768
DraI	TTTAAA	1 cut(s)	1705
EaeI	YGGCCR	1 cut(s)	1491
EagI	CGGCCG	1 cut(s)	1491
Eam1104I	CTCTTC	5 cut(s)	228, 840, 915, 1141, 1734
EarI	CTCTTC	5 cut(s)	228, 840, 915, 1141, 1734
Ecl136II	GAGCTC	4 cut(s)	15, 66, 162, 319
EclXI	CGGCCG	1 cut(s)	1491
Eco130I	CCWWGG	2 cut(s)	240, 1177
Eco24I	GRGCYC	5 cut(s)	17, 68, 164, 182, 321
Eco31I	GGTCTC	2 cut(s)	112, 865
Eco32I	GATATC	1 cut(s)	1216
Eco52I	CGGCCG	1 cut(s)	1491
Eco53kI	GAGCTC	4 cut(s)	15, 66, 162, 319
Eco57I	CTGAAG	2 cut(s)	1230, 1485
Eco72I	CACGTG	1 cut(s)	1246
Eco88I	CYCGRG	2 cut(s)	131, 150
EcoICRI	GAGCTC	4 cut(s)	15, 66, 162, 319
EcoNI	CCTNNNNNAGG	2 cut(s)	632, 1370
EcoO109I	RGGNCCY	1 cut(s)	849
EcoRI	GAATTC	1 cut(s)	268
EcoRII	CCWGG	3 cut(s)	1064, 1391, 1550
EcoRV	GATATC	1 cut(s)	1216
EcoT14I	CCWWGG	2 cut(s)	240, 1177
EcoT22I	ATGCAT	1 cut(s)	1038
EcoT38I	GRGCYC	5 cut(s)	17, 68, 164, 182, 321
EgeI	GGCGCC	1 cut(s)	117
EheI	GGCGCC	1 cut(s)	117
ErhI	CCWWGG	2 cut(s)	240, 1177
FalI	AAGNNNNNCTT	2 cut(s)	848, 880
FbaI	TGATCA	2 cut(s)	765, 1768
Fnu4HI	GCNGC	3 cut(s)	477, 1236, 1571
FokI	GGATG	9 cut(s)	50, 212, 610, 830, 1241, 1295, 1397, 1524, 1768
FriOI	GRGCYC	5 cut(s)	17, 68, 164, 182, 321
Fsp4HI	GCNGC	3 cut(s)	477, 1236, 1571
FspBI	CTAG	5 cut(s)	171, 540, 906, 1263, 1323
GlaI	GCGC	1 cut(s)	117
GluI	GCNGC	3 cut(s)	477, 1236, 1571
GsaI	CCCAGC	1 cut(s)	849
GsuI	CTGGAG	2 cut(s)	450, 492
HaeII	RGCGCY	1 cut(s)	119
HaeIII	GGCC	5 cut(s)	50, 851, 1327, 1493, 1573
HapII	CCGG	5 cut(s)	119, 132, 677, 1289, 1494
HgaI	GACGC	1 cut(s)	713
HhaI	GCGC	1 cut(s)	118
Hin1I	GRCGYC	1 cut(s)	116
Hin6I	GCGC	1 cut(s)	116
HinP1I	GCGC	1 cut(s)	116
HinfI	GANTC	6 cut(s)	236, 616, 788, 1297, 1388, 1635
HpaII	CCGG	5 cut(s)	119, 132, 677, 1289, 1494
HphI	GGTGA	4 cut(s)	691, 760, 989, 1778
Hpy166II	GTNNAC	3 cut(s)	189, 328, 749
Hpy188I	TCNGA	7 cut(s)	37, 63, 75, 793, 801, 1632, 1666
Hpy188III	TCNNGA	7 cut(s)	906, 1263, 1289, 1358, 1366, 1736, 1772
Hpy8I	GTNNAC	3 cut(s)	189, 328, 749
Hpy99I	CGWCG	4 cut(s)	37, 47, 94, 100
HpyAV	CCTTC	7 cut(s)	139, 255, 683, 874, 1056, 1450, 1609
HpyCH4III	ACNGT	6 cut(s)	719, 776, 903, 1008, 1488, 1675
HpyCH4IV	ACGT	1 cut(s)	1245
HpyF10VI	GCNNNNNNNGC	3 cut(s)	146, 1505, 1576
HpyF3I	CTNAG	4 cut(s)	62, 181, 629, 1367
HpySE526I	ACGT	1 cut(s)	1245
Hsp92I	GRCGYC	1 cut(s)	116
HspAI	GCGC	1 cut(s)	116
KasI	GGCGCC	1 cut(s)	115
Kpn2I	TCCGGA	1 cut(s)	1288
KpnI	GGTACC	1 cut(s)	248
KroI	GCCGGC	1 cut(s)	118
KroNI	GCCGGC	1 cut(s)	120
Ksp22I	TGATCA	2 cut(s)	765, 1768
KspI	CCGCGG	1 cut(s)	1447
Kzo9I	GATC	6 cut(s)	52, 86, 765, 796, 952, 1768
LguI	GCTCTTC	1 cut(s)	915
LmnI	GCTCC	6 cut(s)	12, 71, 316, 495, 1232, 1291
Lsp1109I	GCAGC	2 cut(s)	463, 1222
LweI	GCATC	4 cut(s)	473, 656, 1273, 1408
MaeI	CTAG	5 cut(s)	171, 540, 906, 1263, 1323
MaeII	ACGT	1 cut(s)	1245
MaeIII	GTNAC	3 cut(s)	679, 934, 977
MalI	GATC	6 cut(s)	54, 88, 767, 798, 954, 1770
MboI	GATC	6 cut(s)	52, 86, 765, 796, 952, 1768
MfeI	CAATTG	1 cut(s)	1329
MhlI	GDGCHC	7 cut(s)	17, 68, 164, 182, 321, 500, 1726
Mly113I	GGCGCC	1 cut(s)	116
MlyI	GAGTC	1 cut(s)	245
MmeI	TCCRAC	3 cut(s)	15, 415, 549
Mph1103I	ATGCAT	1 cut(s)	1038
MreI	CGCCGGCG	1 cut(s)	118
MroI	TCCGGA	1 cut(s)	1288
MroNI	GCCGGC	1 cut(s)	118
MroXI	GAANNNNTTC	3 cut(s)	1296, 1353, 1657
MseI	TTAA	5 cut(s)	351, 374, 1412, 1454, 1704
MslI	CAYNNNNRTG	2 cut(s)	1350, 1705
MspA1I	CMGCKG	1 cut(s)	1446
MspI	CCGG	5 cut(s)	119, 132, 677, 1289, 1494
MspR9I	CCNGG	5 cut(s)	132, 133, 1066, 1393, 1552
MunI	CAATTG	1 cut(s)	1329
MvaI	CCWGG	3 cut(s)	1066, 1393, 1552
MvnI	CGCG	1 cut(s)	1446
MwoI	GCNNNNNNNGC	3 cut(s)	146, 1505, 1576
NaeI	GCCGGC	1 cut(s)	120
NarI	GGCGCC	1 cut(s)	116
NciI	CCSGG	2 cut(s)	132, 133
NdeII	GATC	6 cut(s)	52, 86, 765, 796, 952, 1768
NgoMIV	GCCGGC	1 cut(s)	118
NlaIV	GGNNCC	3 cut(s)	117, 246, 850
NmuCI	GTSAC	3 cut(s)	679, 934, 977
NsiI	ATGCAT	1 cut(s)	1038
NspI	RCATGY	3 cut(s)	562, 1562, 1696
NspV	TTCGAA	1 cut(s)	363
PaeI	GCATGC	1 cut(s)	1562
PciI	ACATGT	1 cut(s)	558
PciSI	GCTCTTC	1 cut(s)	915
PcsI	WCGNNNNNNNCGW	4 cut(s)	48, 95, 119, 666
PdiI	GCCGGC	1 cut(s)	120
PdmI	GAANNNNTTC	3 cut(s)	1296, 1353, 1657
PfeI	GAWTC	5 cut(s)	616, 788, 1297, 1388, 1635
PflMI	CCANNNNNTGG	2 cut(s)	195, 1581
PkrI	GCNGC	3 cut(s)	478, 1237, 1572
Ple19I	CGATCG	1 cut(s)	55
PleI	GAGTC	1 cut(s)	244
PluTI	GGCGCC	1 cut(s)	119
PmaCI	CACGTG	1 cut(s)	1246
PmlI	CACGTG	1 cut(s)	1246
PpsI	GAGTC	1 cut(s)	244
Ppu21I	YACGTR	1 cut(s)	1246
PscI	ACATGT	1 cut(s)	558
PsiI	TTATAA	1 cut(s)	1647
Psp124BI	GAGCTC	4 cut(s)	17, 68, 164, 321
Psp6I	CCWGG	3 cut(s)	1064, 1391, 1550
PspCI	CACGTG	1 cut(s)	1246
PspFI	CCCAGC	1 cut(s)	845
PspGI	CCWGG	3 cut(s)	1064, 1391, 1550
PspN4I	GGNNCC	3 cut(s)	117, 246, 850
PspPI	GGNCC	2 cut(s)	849, 1572
PvuI	CGATCG	1 cut(s)	55
RsaI	GTAC	8 cut(s)	82, 246, 544, 552, 600, 748, 900, 1691
RsaNI	GTAC	8 cut(s)	81, 245, 543, 551, 599, 747, 899, 1690
RseI	CAYNNNNRTG	2 cut(s)	1350, 1705
SacI	GAGCTC	4 cut(s)	17, 68, 164, 321
SacII	CCGCGG	1 cut(s)	1447
SapI	GCTCTTC	1 cut(s)	915
SaqAI	TTAA	5 cut(s)	351, 374, 1412, 1454, 1704
SatI	GCNGC	3 cut(s)	477, 1236, 1571
Sau3AI	GATC	6 cut(s)	52, 86, 765, 796, 952, 1768
Sau96I	GGNCC	2 cut(s)	849, 1572
ScaI	AGTACT	1 cut(s)	900
SchI	GAGTC	1 cut(s)	245
ScrFI	CCNGG	5 cut(s)	132, 133, 1066, 1393, 1552
SduI	GDGCHC	7 cut(s)	17, 68, 164, 182, 321, 500, 1726
SfaNI	GCATC	4 cut(s)	473, 656, 1273, 1408
SfcI	CTRYAG	1 cut(s)	1484
SfoI	GGCGCC	1 cut(s)	117
Sfr303I	CCGCGG	1 cut(s)	1447
SfuI	TTCGAA	1 cut(s)	363
SgrAI	CRCCGGYG	1 cut(s)	118
SgrBI	CCGCGG	1 cut(s)	1447
SmaI	CCCGGG	1 cut(s)	133
SmiI	ATTTAAAT	1 cut(s)	1705
SmiMI	CAYNNNNRTG	2 cut(s)	1350, 1705
SphI	GCATGC	1 cut(s)	1562
SsiI	CCGC	5 cut(s)	10, 1334, 1444, 1446, 1570
SspDI	GGCGCC	1 cut(s)	115
SspMI	CTAG	5 cut(s)	171, 540, 906, 1263, 1323
SstI	GAGCTC	4 cut(s)	17, 68, 164, 321
StyD4I	CCNGG	5 cut(s)	130, 131, 1064, 1391, 1550
StyI	CCWWGG	2 cut(s)	240, 1177
SwaI	ATTTAAAT	1 cut(s)	1705
TaaI	ACNGT	6 cut(s)	719, 776, 903, 1008, 1488, 1675
TaiI	ACGT	1 cut(s)	1248
TaqI	TCGA	2 cut(s)	363, 1749
TatI	WGTACW	6 cut(s)	80, 542, 550, 746, 898, 1689
TauI	GCSGC	1 cut(s)	1573
TfiI	GAWTC	5 cut(s)	616, 788, 1297, 1388, 1635
Tru1I	TTAA	5 cut(s)	351, 374, 1412, 1454, 1704
Tru9I	TTAA	5 cut(s)	351, 374, 1412, 1454, 1704
TscAI	CASTG	6 cut(s)	189, 196, 424, 932, 1278, 1645
TseFI	GTSAC	3 cut(s)	679, 934, 977
TseI	GCWGC	2 cut(s)	476, 1235
Tsp45I	GTSAC	3 cut(s)	679, 934, 977
TspDTI	ATGAA	7 cut(s)	246, 443, 834, 1038, 1362, 1395, 1650
TspGWI	ACGGA	2 cut(s)	616, 816
TspMI	CCCGGG	1 cut(s)	131
TspRI	CASTG	6 cut(s)	189, 196, 424, 932, 1278, 1645
Van91I	CCANNNNNTGG	2 cut(s)	195, 1581
XagI	CCTNNNNNAGG	2 cut(s)	632, 1370
XapI	RAATTY	4 cut(s)	268, 379, 575, 583
XbaI	TCTAGA	2 cut(s)	905, 1262
XceI	RCATGY	3 cut(s)	562, 1562, 1696
XmaI	CCCGGG	1 cut(s)	131
XmnI	GAANNNNTTC	3 cut(s)	1296, 1353, 1657
XspI	CTAG	5 cut(s)	171, 540, 906, 1263, 1323
ZrmI	AGTACT	1 cut(s)	900
Zsp2I	ATGCAT	1 cut(s)	1038

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.