FvH4_2g36970

3beta-hydroxysteroid-dehydrogenase decarboxylase isoform

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Reverse (-)
26984240 .. 26989437
5198 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g36970.t2

Sequence Viewer

Length: 1683 bp
ATGGCCGGCGATGACAGGTGGTGCGTCGTCACCGGCGGCCGAGGCTTCGCCGCTCGCCATTTGGTCCTCATGCTCATCCGCCAAAACATCTACCGCGTCCGAATCGCCGACCTCGGCCCTACGATCGATCTCGAACATTCCGAGTCCGACGGAGTCCTCGCCGATGCTCTAAACTCCGGCCGCGCCGAGTACATTTCCATCGACCTCCGCCGCAAGGATCAAGTTCTTCAAGCATGTCAAGGCGCTGAGGTTGTGTTCCACATGGCGGCTCCTAATTCGTCGATCAACAATTTCCAGCTCCACCATTCTGTCAATGTGGAAGGAACTAAGAATGTGATTGATGCTTGTGTTGAGCAGAAAGTGAAGAGGCTCATCTACACTAGCTCTCCTAGCGTTGTGTTTGATGGGGTTCATAGCATTATTGATGGGGATGAGTCATTGCCATATCCACCTAAGCACAATGATACTTATTCGGCCACTAAAGCGCAAGGTGAAGAGTTGGTAATCAAGGCAAACGGTGTTAAAGGGCTTCTAACATGCTGCATACGCCCTAGCAGTATTTTCGGACCTGGTGATAGGTTACTTGTTCCGTCTTTAGTTGTTGCCGCCAGGGCAGGGAAATCAAAGTTCATTATCGGAGATGGCAATAACATTTATGACTTCACGTATGTTGAAAATGTGGCCCATGCCCATGTATGTGCAGAACGAGCTCTAGCATCTGAAGCGACAGTTGCAGAGAAAGCCGCAGGACAGGCATATTTTATAACCAATATGGAACCTATCAAATTTTGGGATTTTATGTCTCTTATTTTAGAAGGTCTTGGCTATGAAAGACCAAGGATAAAAATCCCTGCAGCTGTTATGATGCCAATTGCACATGTGGTGGAGTGGACATATAAGCTTCTAGGCCCGTATGGGATGAAGGTTCCACAGCTGACGCCTTCAAGAATTAGACTCCTCTCTTGCACCAGATCTTTTAAATCATCAAAAGCACAGGATCAAATCGGTTACACACCCATCATTTCGCTTCAGGAGGGTCTCAAGAGAACAATTGAGTCATACCCACACTTGAGGGCTGAACATCAACCTAAAAGAGAAGGACCATCTAAAGCTTCTGTGTATCTTGGAAGCGGAAGGGTTGCTGATACATTACTGTGGAAGGACAAAAAACAGACATTCAAGGCACTATTAGTTTTGATTACAATCTACTGCAACTTCATTGCATCTCAAGCTACAGTTATAACTGTCATTTCAAAGAGTCTCATGTTCGCATCAATTTTCGTGTTCATCTCCAGCAATTTACCAGAAAAGATATTAGGATATAAACTCGAGAAGCTTCAGTCATCACATTTTCACTTATCAGAAGAGATGTCACAACAAATTGCTGGATCAGTGGCCTCATCATGGAATATATCTGTGAAAACTTTAAAATCTCTTGGGAAAGGAAATGACTGGGTATTGTTCCTTAAGGTGGCTCTATCCCTATTGGTTCTTAGCTTTCTTGGAGCCATTTCACTTCAAACCTCATTTATTATAGGAGTCTCGATTGCCTTTCTAGCCTTCTATGTGTACGAAAAACAAGAAGAAAAAATTGATGCCATGGTCCTAGAAGCTTTCTCACATGGATGCAAATTGAAGTCTGATATACTCCGAAAATTCAATACATCCAAAAAGATTGAGTGA

Protein Analysis

561

Amino Acids

61.9

Weight (kDa)

8.96

Isoelectric Point (pI)

37.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
3Beta_HSD PF01073 9 - 283 2.6e-79 3-beta hydroxysteroid dehydrogenase/isomerase family
Epimerase PF01370 9 - 237 1.1e-34 NAD dependent epimerase/dehydratase family
Polysacc_synt_2 PF02719 9 - 129 8e-08 Polysaccharide biosynthesis protein
GDP_Man_Dehyd PF16363 10 - 244 3.3e-15 GDP-mannose 4,6 dehydratase
NAD_binding_4 PF07993 10 - 228 1.4e-13 Male sterility protein
NAD_binding_10 PF13460 57 - 133 1.8e-08 NAD(P)H-binding
RmlD_sub_bind PF04321 66 - 282 4.6e-08 RmlD substrate binding domain
Reticulon PF02453 380 - 535 7.2e-33 Reticulon
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 764, 1241
AccBSI CCGCTC 1 cut(s) 53
AccII CGCG 2 cut(s) 96, 183
AclWI GGATC 3 cut(s) 225, 1005, 1396
AcoI YGGCCR 4 cut(s) 3, 37, 178, 474
AcsI RAATTY 2 cut(s) 785, 1655
AcuI CTGAAG 3 cut(s) 741, 1013, 1322
AcyI GRCGYC 1 cut(s) 938
AfaI GTAC 2 cut(s) 191, 1571
AfiI CCNNNNNNNGG 5 cut(s) 214, 265, 615, 1404, 1471
AflII CTTAAG 1 cut(s) 1466
AflIII ACRYGT 1 cut(s) 877
AgsI TTSAA 8 cut(s) 230, 674, 945, 1180, 1254, 1520, 1636, 1660
AjnI CCWGG 2 cut(s) 568, 608
Alw21I GWGCWC 1 cut(s) 712
Alw26I GTCTC 4 cut(s) 807, 1043, 1265, 1546
AlwI GGATC 3 cut(s) 225, 1005, 1396
Ama87I CYCGRG 1 cut(s) 1328
AoxI GGCC 8 cut(s) 3, 37, 115, 178, 474, 681, 907, 1395
ApeKI GCWGC 2 cut(s) 540, 854
ApoI RAATTY 2 cut(s) 785, 1655
AspLEI GCGC 3 cut(s) 185, 245, 487
AspS9I GGNCC 7 cut(s) 64, 116, 566, 682, 908, 1100, 1603
AsuHPI GGTGA 3 cut(s) 22, 503, 584
AvaI CYCGRG 1 cut(s) 1328
AvaII GGWCC 4 cut(s) 64, 566, 1100, 1603
BanII GRGCYC 1 cut(s) 712
Bbv12I GWGCWC 1 cut(s) 712
BbvCI CCTCAGC 1 cut(s) 246
BbvI GCAGC 2 cut(s) 527, 866
BccI CCATC 6 cut(s) 206, 398, 419, 635, 1025, 1111
BcgI CGANNNNNNTGC 2 cut(s) 544, 578
BciT130I CCWGG 2 cut(s) 570, 610
BcoDI GTCTC 4 cut(s) 807, 1043, 1265, 1546
BfaI CTAG 7 cut(s) 381, 390, 552, 713, 905, 1556, 1607
BfmI CTRYAG 2 cut(s) 852, 1233
BfoI RGCGCY 1 cut(s) 246
BfrI CTTAAG 1 cut(s) 1466
BglI GCCNNNNNGGC 1 cut(s) 611
BglII AGATCT 1 cut(s) 971
BisI GCNGC 9 cut(s) 37, 51, 181, 211, 267, 541, 606, 744, 855
BlsI GCNGC 9 cut(s) 38, 52, 182, 212, 268, 542, 607, 745, 856
Bme1390I CCNGG 2 cut(s) 570, 610
Bme18I GGWCC 4 cut(s) 64, 566, 1100, 1603
BmeT110I CYCGRG 1 cut(s) 1328
BmgT120I GGNCC 7 cut(s) 64, 116, 566, 682, 908, 1100, 1603
BmiI GGNNCC 4 cut(s) 270, 777, 927, 1507
BmrFI CCNGG 2 cut(s) 570, 610
BmrI ACTGGG 1 cut(s) 1462
BmsI GCATC 8 cut(s) 154, 331, 725, 855, 1232, 1280, 1585, 1616
BmuI ACTGGG 1 cut(s) 1462
BpmI CTGGAG 1 cut(s) 1276
Bpu10I CCTNAGC 2 cut(s) 246, 453
BpuEI CTTGAG 3 cut(s) 1025, 1090, 1212
Bsa29I ATCGAT 1 cut(s) 126
BsaAI YACGTR 1 cut(s) 666
BsaBI GATNNNNATC 2 cut(s) 845, 1202
BsaHI GRCGYC 1 cut(s) 938
BsaI GGTCTC 1 cut(s) 1043
BsaJI CCNNGG 5 cut(s) 40, 112, 609, 836, 1599
BsaXI ACNNNNNCTCC 2 cut(s) 370, 400
Bsc4I CCNNNNNNNGG 5 cut(s) 214, 265, 615, 1404, 1471
Bse118I RCCGGY 2 cut(s) 5, 32
Bse1I ACTGG 1 cut(s) 1457
Bse3DI GCAATG 2 cut(s) 437, 1218
Bse8I GATNNNNATC 2 cut(s) 845, 1202
BseBI CCWGG 2 cut(s) 570, 610
BseCI ATCGAT 1 cut(s) 126
BseDI CCNNGG 5 cut(s) 40, 112, 609, 836, 1599
BseGI GGATG 5 cut(s) 75, 436, 924, 1631, 1664
BseJI GATNNNNATC 2 cut(s) 845, 1202
BseLI CCNNNNNNNGG 5 cut(s) 214, 265, 615, 1404, 1471
BseMI GCAATG 2 cut(s) 437, 1218
BseMII CTCAG 1 cut(s) 237
BseNI ACTGG 1 cut(s) 1457
BseRI GAGGAG 1 cut(s) 947
BseX3I CGGCCG 2 cut(s) 37, 178
BseXI GCAGC 2 cut(s) 527, 866
BsgI GTGCAG 1 cut(s) 720
Bsh1236I CGCG 2 cut(s) 96, 183
Bsh1285I CGRYCG 3 cut(s) 40, 126, 181
BshFI GGCC 8 cut(s) 5, 39, 117, 180, 476, 683, 909, 1397
BshVI ATCGAT 1 cut(s) 126
BsiEI CGRYCG 3 cut(s) 40, 126, 181
BsiHKAI GWGCWC 1 cut(s) 712
BsiHKCI CYCGRG 1 cut(s) 1328
BsiSI CCGG 3 cut(s) 6, 33, 177
BslI CCNNNNNNNGG 5 cut(s) 214, 265, 615, 1404, 1471
BsmAI GTCTC 4 cut(s) 807, 1043, 1265, 1546
BsnI GGCC 8 cut(s) 5, 39, 117, 180, 476, 683, 909, 1397
Bso31I GGTCTC 1 cut(s) 1043
BsoBI CYCGRG 1 cut(s) 1328
Bsp1286I GDGCHC 1 cut(s) 712
Bsp143I GATC 7 cut(s) 123, 127, 217, 282, 971, 997, 1388
Bsp19I CCATGG 1 cut(s) 1599
BspANI GGCC 8 cut(s) 5, 39, 117, 180, 476, 683, 909, 1397
BspCNI CTCAG 1 cut(s) 238
BspDI ATCGAT 1 cut(s) 126
BspFNI CGCG 2 cut(s) 96, 183
BspLI GGNNCC 4 cut(s) 270, 777, 927, 1507
BspMAI CTGCAG 1 cut(s) 856
BspPI GGATC 3 cut(s) 225, 1005, 1396
BspTI CTTAAG 1 cut(s) 1466
BspTNI GGTCTC 1 cut(s) 1043
BsrBI CCGCTC 1 cut(s) 53
BsrDI GCAATG 2 cut(s) 437, 1218
BsrFI RCCGGY 2 cut(s) 5, 32
BsrI ACTGG 1 cut(s) 1457
BssAI RCCGGY 2 cut(s) 5, 32
BssECI CCNNGG 5 cut(s) 40, 112, 609, 836, 1599
BssMI GATC 7 cut(s) 123, 127, 217, 282, 971, 997, 1388
BssNI GRCGYC 1 cut(s) 938
BssT1I CCWWGG 2 cut(s) 836, 1599
Bst2UI CCWGG 2 cut(s) 570, 610
Bst4CI ACNGT 5 cut(s) 518, 730, 1155, 1237, 1246
Bst6I CTCTTC 3 cut(s) 359, 489, 1359
BstACI GRCGYC 1 cut(s) 938
BstAFI CTTAAG 1 cut(s) 1466
BstBAI YACGTR 1 cut(s) 666
BstC8I GCNNGC 2 cut(s) 7, 55
BstDEI CTNAG 4 cut(s) 246, 327, 453, 1493
BstDSI CCRYGG 1 cut(s) 1599
BstF5I GGATG 5 cut(s) 75, 436, 924, 1631, 1664
BstFNI CGCG 2 cut(s) 96, 183
BstH2I RGCGCY 1 cut(s) 246
BstHHI GCGC 3 cut(s) 185, 245, 487
BstKTI GATC 7 cut(s) 126, 130, 220, 285, 974, 1000, 1391
BstMAI GTCTC 4 cut(s) 807, 1043, 1265, 1546
BstMBI GATC 7 cut(s) 123, 127, 217, 282, 971, 997, 1388
BstMCI CGRYCG 3 cut(s) 40, 126, 181
BstNI CCWGG 2 cut(s) 570, 610
BstNSI RCATGY 3 cut(s) 237, 540, 881
BstSCI CCNGG 2 cut(s) 568, 608
BstSFI CTRYAG 2 cut(s) 852, 1233
BstUI CGCG 2 cut(s) 96, 183
BstV1I GCAGC 2 cut(s) 527, 866
BstX2I RGATCY 1 cut(s) 971
BstYI RGATCY 1 cut(s) 971
BstZI CGGCCG 2 cut(s) 37, 178
Bsu15I ATCGAT 1 cut(s) 126
BsuRI GGCC 8 cut(s) 5, 39, 117, 180, 476, 683, 909, 1397
BsuTUI ATCGAT 1 cut(s) 126
BtgI CCRYGG 1 cut(s) 1599
BtgZI GCGATG 1 cut(s) 24
BtsCI GGATG 5 cut(s) 75, 436, 924, 1631, 1664
BtsIMutI CAGTG 1 cut(s) 1398
Cac8I GCNNGC 2 cut(s) 7, 55
CfoI GCGC 3 cut(s) 185, 245, 487
Cfr10I RCCGGY 2 cut(s) 5, 32
Cfr13I GGNCC 7 cut(s) 64, 116, 566, 682, 908, 1100, 1603
ClaI ATCGAT 1 cut(s) 126
CseI GACGC 3 cut(s) 13, 85, 946
CsiI ACCWGGT 1 cut(s) 568
Csp6I GTAC 2 cut(s) 190, 1570
CviQI GTAC 2 cut(s) 190, 1570
DdeI CTNAG 4 cut(s) 246, 327, 453, 1493
DpnI GATC 7 cut(s) 125, 129, 219, 284, 973, 999, 1390
DpnII GATC 7 cut(s) 123, 127, 217, 282, 971, 997, 1388
DraI TTTAAA 2 cut(s) 979, 1428
EaeI YGGCCR 4 cut(s) 3, 37, 178, 474
EagI CGGCCG 2 cut(s) 37, 178
Eam1104I CTCTTC 3 cut(s) 359, 489, 1359
EarI CTCTTC 3 cut(s) 359, 489, 1359
EciI GGCGGA 2 cut(s) 68, 197
Ecl136II GAGCTC 1 cut(s) 710
EclXI CGGCCG 2 cut(s) 37, 178
Eco130I CCWWGG 2 cut(s) 836, 1599
Eco24I GRGCYC 1 cut(s) 712
Eco31I GGTCTC 1 cut(s) 1043
Eco47I GGWCC 4 cut(s) 64, 566, 1100, 1603
Eco52I CGGCCG 2 cut(s) 37, 178
Eco53kI GAGCTC 1 cut(s) 710
Eco57I CTGAAG 3 cut(s) 741, 1013, 1322
Eco88I CYCGRG 1 cut(s) 1328
EcoICRI GAGCTC 1 cut(s) 710
EcoRII CCWGG 2 cut(s) 568, 608
EcoT14I CCWWGG 2 cut(s) 836, 1599
EcoT38I GRGCYC 1 cut(s) 712
ErhI CCWWGG 2 cut(s) 836, 1599
Fnu4HI GCNGC 9 cut(s) 37, 51, 181, 211, 267, 541, 606, 744, 855
FokI GGATG 5 cut(s) 62, 443, 931, 1638, 1651
FriOI GRGCYC 1 cut(s) 712
Fsp4HI GCNGC 9 cut(s) 37, 51, 181, 211, 267, 541, 606, 744, 855
FspBI CTAG 7 cut(s) 381, 390, 552, 713, 905, 1556, 1607
GlaI GCGC 3 cut(s) 184, 244, 486
GluI GCNGC 9 cut(s) 37, 51, 181, 211, 267, 541, 606, 744, 855
GsuI CTGGAG 1 cut(s) 1276
HaeII RGCGCY 1 cut(s) 246
HaeIII GGCC 8 cut(s) 5, 39, 117, 180, 476, 683, 909, 1397
HapII CCGG 3 cut(s) 6, 33, 177
HgaI GACGC 3 cut(s) 13, 85, 946
HhaI GCGC 3 cut(s) 185, 245, 487
Hin1I GRCGYC 1 cut(s) 938
Hin6I GCGC 3 cut(s) 183, 243, 485
HinP1I GCGC 3 cut(s) 183, 243, 485
HindIII AAGCTT 4 cut(s) 899, 1110, 1334, 1611
HinfI GANTC 8 cut(s) 102, 143, 153, 434, 954, 1055, 1258, 1539
HpaII CCGG 3 cut(s) 6, 33, 177
HphI GGTGA 3 cut(s) 22, 503, 584
Hpy166II GTNNAC 2 cut(s) 891, 1570
Hpy188I TCNGA 9 cut(s) 101, 142, 148, 566, 638, 721, 1363, 1642, 1652
Hpy188III TCNNGA 6 cut(s) 131, 945, 1031, 1042, 1330, 1543
Hpy8I GTNNAC 2 cut(s) 891, 1570
Hpy99I CGWCG 3 cut(s) 29, 152, 283
HpyAV CCTTC 8 cut(s) 314, 809, 916, 951, 1091, 1128, 1153, 1570
HpyCH4III ACNGT 5 cut(s) 518, 730, 1155, 1237, 1246
HpyCH4IV ACGT 1 cut(s) 665
HpyCH4V TGCA 9 cut(s) 543, 701, 734, 854, 875, 966, 1212, 1223, 1629
HpyF3I CTNAG 4 cut(s) 246, 327, 453, 1493
HpySE526I ACGT 1 cut(s) 665
Hsp92I GRCGYC 1 cut(s) 938
HspAI GCGC 3 cut(s) 183, 243, 485
KroI GCCGGC 1 cut(s) 5
KroNI GCCGGC 1 cut(s) 7
Kzo9I GATC 7 cut(s) 123, 127, 217, 282, 971, 997, 1388
LmnI GCTCC 3 cut(s) 274, 303, 1505
Lsp1109I GCAGC 2 cut(s) 527, 866
LweI GCATC 8 cut(s) 154, 331, 725, 855, 1232, 1280, 1585, 1616
MabI ACCWGGT 1 cut(s) 568
MaeI CTAG 7 cut(s) 381, 390, 552, 713, 905, 1556, 1607
MaeII ACGT 1 cut(s) 665
MaeIII GTNAC 4 cut(s) 28, 579, 1007, 1371
MalI GATC 7 cut(s) 125, 129, 219, 284, 973, 999, 1390
MbiI CCGCTC 1 cut(s) 53
MboI GATC 7 cut(s) 123, 127, 217, 282, 971, 997, 1388
MboII GAAGA 5 cut(s) 218, 376, 506, 1376, 1595
MfeI CAATTG 2 cut(s) 870, 1050
MflI RGATCY 1 cut(s) 971
MhlI GDGCHC 1 cut(s) 712
MlyI GAGTC 7 cut(s) 152, 162, 443, 948, 1064, 1267, 1548
MmeI TCCRAC 1 cut(s) 171
MroNI GCCGGC 1 cut(s) 5
MseI TTAA 4 cut(s) 522, 978, 1427, 1467
MslI CAYNNNNRTG 4 cut(s) 690, 696, 1153, 1624
MspA1I CMGCKG 2 cut(s) 857, 934
MspCI CTTAAG 1 cut(s) 1466
MspI CCGG 3 cut(s) 6, 33, 177
MspR9I CCNGG 2 cut(s) 570, 610
MunI CAATTG 2 cut(s) 870, 1050
MvaI CCWGG 2 cut(s) 570, 610
MvnI CGCG 2 cut(s) 96, 183
NaeI GCCGGC 1 cut(s) 7
NcoI CCATGG 1 cut(s) 1599
NdeII GATC 7 cut(s) 123, 127, 217, 282, 971, 997, 1388
NgoMIV GCCGGC 1 cut(s) 5
NlaIV GGNNCC 4 cut(s) 270, 777, 927, 1507
NmeAIII GCCGAG 3 cut(s) 65, 93, 211
NmuCI GTSAC 2 cut(s) 28, 1371
NspI RCATGY 3 cut(s) 237, 540, 881
PaeR7I CTCGAG 1 cut(s) 1328
PciI ACATGT 1 cut(s) 877
PcsI WCGNNNNNNNCGW 1 cut(s) 138
PdiI GCCGGC 1 cut(s) 7
PfeI GAWTC 1 cut(s) 102
PflFI GACNNNGTC 1 cut(s) 152
PkrI GCNGC 9 cut(s) 38, 52, 182, 212, 268, 542, 607, 745, 856
Ple19I CGATCG 1 cut(s) 126
PleI GAGTC 7 cut(s) 151, 161, 442, 948, 1063, 1266, 1547
PpsI GAGTC 7 cut(s) 151, 161, 442, 948, 1063, 1266, 1547
Ppu21I YACGTR 1 cut(s) 666
PscI ACATGT 1 cut(s) 877
PsiI TTATAA 2 cut(s) 764, 1241
Psp124BI GAGCTC 1 cut(s) 712
Psp6I CCWGG 2 cut(s) 568, 608
PspGI CCWGG 2 cut(s) 568, 608
PspN4I GGNNCC 4 cut(s) 270, 777, 927, 1507
PspPI GGNCC 7 cut(s) 64, 116, 566, 682, 908, 1100, 1603
PstI CTGCAG 1 cut(s) 856
PsuI RGATCY 1 cut(s) 971
PsyI GACNNNGTC 1 cut(s) 152
PvuI CGATCG 1 cut(s) 126
PvuII CAGCTG 2 cut(s) 857, 934
RsaI GTAC 2 cut(s) 191, 1571
RsaNI GTAC 2 cut(s) 190, 1570
RseI CAYNNNNRTG 4 cut(s) 690, 696, 1153, 1624
SacI GAGCTC 1 cut(s) 712
SaqAI TTAA 4 cut(s) 522, 978, 1427, 1467
SatI GCNGC 9 cut(s) 37, 51, 181, 211, 267, 541, 606, 744, 855
Sau3AI GATC 7 cut(s) 123, 127, 217, 282, 971, 997, 1388
Sau96I GGNCC 7 cut(s) 64, 116, 566, 682, 908, 1100, 1603
SchI GAGTC 7 cut(s) 152, 162, 443, 948, 1064, 1267, 1548
ScrFI CCNGG 2 cut(s) 570, 610
SduI GDGCHC 1 cut(s) 712
SexAI ACCWGGT 1 cut(s) 568
SfaNI GCATC 8 cut(s) 154, 331, 725, 855, 1232, 1280, 1585, 1616
SfcI CTRYAG 2 cut(s) 852, 1233
Sfr274I CTCGAG 1 cut(s) 1328
SgrAI CRCCGGYG 1 cut(s) 32
SinI GGWCC 4 cut(s) 64, 566, 1100, 1603
SlaI CTCGAG 1 cut(s) 1328
SmiMI CAYNNNNRTG 4 cut(s) 690, 696, 1153, 1624
SmlI CTYRAG 5 cut(s) 1040, 1069, 1227, 1328, 1466
SmoI CTYRAG 5 cut(s) 1040, 1069, 1227, 1328, 1466
SspMI CTAG 7 cut(s) 381, 390, 552, 713, 905, 1556, 1607
SstI GAGCTC 1 cut(s) 712
StyD4I CCNGG 2 cut(s) 568, 608
StyI CCWWGG 2 cut(s) 836, 1599
TaaI ACNGT 5 cut(s) 518, 730, 1155, 1237, 1246
TaiI ACGT 1 cut(s) 668
TaqI TCGA 6 cut(s) 126, 132, 201, 281, 1329, 1544
TatI WGTACW 1 cut(s) 189
TauI GCSGC 7 cut(s) 39, 53, 183, 213, 269, 608, 746
TfiI GAWTC 1 cut(s) 102
Tru1I TTAA 4 cut(s) 522, 978, 1427, 1467
Tru9I TTAA 4 cut(s) 522, 978, 1427, 1467
TscAI CASTG 1 cut(s) 1398
TseFI GTSAC 2 cut(s) 28, 1371
TseI GCWGC 2 cut(s) 540, 854
Tsp45I GTSAC 2 cut(s) 28, 1371
TspDTI ATGAA 6 cut(s) 401, 619, 843, 935, 1207, 1276
TspGWI ACGGA 2 cut(s) 165, 579
TspRI CASTG 1 cut(s) 1398
Tth111I GACNNNGTC 1 cut(s) 152
Vha464I CTTAAG 1 cut(s) 1466
VpaK11BI GGWCC 4 cut(s) 64, 566, 1100, 1603
XapI RAATTY 2 cut(s) 785, 1655
XceI RCATGY 3 cut(s) 237, 540, 881
XhoI CTCGAG 1 cut(s) 1328
XspI CTAG 7 cut(s) 381, 390, 552, 713, 905, 1556, 1607
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.