Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr8

Orthogroup ID

OG0003789

Physical Location & Seq

Genomic Coordinates Reverse (-)

2935760 .. 2940169

Gene Structure 4410 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom08g03860.11

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1917 bp

ATGCAATGCAAATACAAGGATAAAAGCGGGAGAAAATTACACGAACTAAAACAGTGTTTCATTTTTGGGTCAAAAGCTATAATTGAATTCCTCTGGTTTTCCTCCGTAAATTTCTGTCACCTTCTTCGTCTGTTTGCTGACTCTCTCACACACTACACTTCCCTCTCTCTCTCTCTCTCTCTCACTCCGATCCTCATTACCTTCACCTCCACCGATCACCGTCGTCTTCTTACAATGCCCGGTGACGAAAAATGGTGCGTGGTCACCGGAGGCCGAGGCTTCGCGGCGCGCCACTTGGTCCAGATGCTGATCCGATACGACGTGTTCCGGGTCCGAATCGCCGACCTGGGCTCCACCGTCGATCTAGAACCTTCCGAGGAGAACGGCATTCTTGCCGAAGCTCTGAGCTCCGGCCGCGCCCAGTACGTGTCCCTCGACCTTCGCAGCAAGAGCCAAGTTCTTCAAGCGTTTCAAGGTGCGGAGGTTGTGTTTCACATGGCGGCTCCCAATTCGTCCATCAACAATTACAAGCTCCACCACTCGGTCAATGTAGAAGGAACACAGAACGCGATTGATGCTTGTACTGAGCTGAAAGTAAAGAGACTAATCTATACTAGCTCCCCGAGTGTTGTTTTCGATGGGATTCATGGGATTGTTGACGGGGATGAGTCGTTGTCATATCCACCTAAGCATAATGATTTCTATTCGGCAACGAAAGCTCAGGGAGAAGAATTGGTGATCAAGGCAAATGGTGTTAAGGGGCTTCTTACATGTTGCATTCGCCCTAGCAGCATTTTTGGACCTGGTGATAGGTTGCTCGTTCCGTCTTTGGTAGTTGCTGCCAGGGCAGGGAAATCCAAGTACATCATTGGTGATGGCAACAACATTTATGATTTCACATATGTTGAAAATGTGGCACATGCGCATATATGTGCTGAGCGAGCTCTTGCATCAGAAGGGACAGTTGCAGATAAAGCGGCAGGGCAGGCATATTTTATAACCAATATGGAACCTATCAAGTTTTGGGAGTTTGTTTCACTTATTCTAGAAGGTCTTGGTTATGAAAGGCCAAGAATAAAAATCCCTGCATTTGTTGTGATGCCAATTGCACATATGGTGGAGTTGACATATAAGCTGTTAGGCCCATATGGGATGAAGGTTCCACAGTTGACCCCTTCGAGAATTAGACTCCTCTCTTGCACCCGATCTTTTAAATGTTCGAAGGCACAGGATCGAATTGGCTACACACCCATCGTATCGCTTCAGGAGGGTCTGAAAAGGACAATTGAGGCATACCCACATTTGAGGGCTGAACATCTACCGAAAAGAGGAGGGCCATCTAAAGCGTCAATATATCTTGGAAGCGGAAGGGTTGCTGACACGTTACTCTGGAAGGATAAAAAACAGACCTTCAAGGCGTTATTTGTTTTGATTGCAATCTACTACAACTTCGTTGTACCTGGATCTACAATTATTACTATGCTTTCAAAGGTTCTCCTGGTAGCTTCAGTATTCGTGTTCATTCATGCTGTTTTACCAGAAAAGATATTAGGATACAAAATTGAGAAGCTTCAGTCATCACATTTCCACTTATCAGAAGAGACGTCGCAACAAATTGCCAAGTCTGTGGCTTCATCATGGAATGCATCTGTTAAAACATTGAAATCTCTTGGCAAGGGAAATGATGGGATTTTGTTCCTTAAGGTTACTCTCACCCTACTGGTTCTTAGCTTCCTTGGAGCGTTTTCACTTCAGAACTTATATGTTATAGGAGTTCCCGCTGCCTTCATAGTTTTCTACGTGTATGAGAAGGAGGAGCAAAAAATTGACGACATGGTCCTCGAAGCTCTCTCTCGTGGATGCAAATTGAAATCGGATATTGTAAAAAAATTCTATACTTCCAAGAAGATTGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0008150 GO:0008152 GO:0016020 GO:0016491 GO:0016614 GO:0016616 GO:0047012 GO:0055114

KEGG Pathways

Metabolic & Signaling

ko00100 ko01100 ko01130 map00100 map01100 map01130

Pfam Domains

Protein Families

3Beta_HSD Reticulon

Protein Analysis

639

Amino Acids

70.89

Weight (kDa)

9.21

Isoelectric Point (pI)

36.62

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003789)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G47290 AT1G47290 AT2G26260 AT2G26260
fragaria_vesca	FvH4_2g36970 FvH4_2g36970
malus_domestica	MD08G1046500.v1.1
prunus_persica	Prupe.1G401700_v2.0.a1 Prupe.1G401700_v2.0.a1
pyrus_communis	pycom08g03860 pycom15g04580 pycom15g04640
rosa_chinensis	RchiOBHm_Chr4g0406951 RchiOBHm_Chr6g0304791
rosa_laevigata	RLG00000008747 RLG00000010949
rosa_multiflora	Rmu_sc0000600.1_g000025 Rmu_sc0003120.1_g000003
rosa_roxburghii	Rroxscaffold_7G00163470
rosa_rugosa	Rorug03G0259800 Rorug04G0075400 Rorug06G0334600 Rorug06G0334600 Rorug06G0334700 Rorug06G0334800
rosa_samantha	Rh4AG141600 Rh4BG138400 Rh4DG135500 Rh6AG446500 Rh6BG455100 Rh6CG460000 Rh6DG446800
rosa_wichuraiana	Rw4G011530 Rw6G038850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	998
AasI	GACNNNNNNGTC	1 cut(s)	1835
AatII	GACGTC	1 cut(s)	1607
Acc16I	TGCGCA	1 cut(s)	924
AccII	CGCG	4 cut(s)	284, 289, 417, 569
AciI	CCGC	8 cut(s)	27, 284, 415, 479, 500, 977, 1365, 1779
AclWI	GGATC	4 cut(s)	184, 304, 1239, 1471
AcoI	YGGCCR	1 cut(s)	412
AcsI	RAATTY	3 cut(s)	86, 109, 1889
AcuI	CTGAAG	4 cut(s)	1247, 1491, 1556, 1736
AcyI	GRCGYC	1 cut(s)	1604
AfaI	GTAC	4 cut(s)	425, 583, 863, 1458
AfiI	CCNNNNNNNGG	3 cut(s)	541, 849, 1328
AflII	CTTAAG	1 cut(s)	1700
AflIII	ACRYGT	5 cut(s)	321, 426, 770, 1380, 1800
AgsI	TTSAA	8 cut(s)	86, 464, 473, 908, 1414, 1488, 1663, 1870
AjiI	CACGTC	1 cut(s)	322
AjnI	CCWGG	5 cut(s)	345, 802, 842, 1459, 1497
Alw21I	GWGCWC	2 cut(s)	410, 946
Alw26I	GTCTC	2 cut(s)	595, 1595
AlwI	GGATC	4 cut(s)	184, 304, 1239, 1471
AlwNI	CAGNNNCTG	1 cut(s)	307
Ama87I	CYCGRG	1 cut(s)	622
AoxI	GGCC	5 cut(s)	271, 412, 1067, 1141, 1334
ApeKI	GCWGC	4 cut(s)	444, 789, 839, 1781
ApoI	RAATTY	3 cut(s)	86, 109, 1889
AscI	GGCGCGCC	1 cut(s)	287
AspLEI	GCGC	4 cut(s)	289, 291, 419, 925
AspS9I	GGNCC	6 cut(s)	298, 331, 800, 1142, 1334, 1837
AsuC2I	CCSGG	2 cut(s)	240, 329
AsuHPI	GGTGA	9 cut(s)	110, 196, 209, 254, 256, 748, 818, 884, 1705
AsuII	TTCGAA	1 cut(s)	1220
AvaI	CYCGRG	1 cut(s)	622
AvaII	GGWCC	4 cut(s)	298, 331, 800, 1837
BanII	GRGCYC	3 cut(s)	353, 410, 946
BauI	CACGAG	1 cut(s)	1854
BbsI	GAAGAC	1 cut(s)	218
Bbv12I	GWGCWC	2 cut(s)	410, 946
BbvI	GCAGC	4 cut(s)	456, 801, 826, 1768
BccI	CCATC	6 cut(s)	524, 632, 869, 1259, 1345, 1679
BceAI	ACGGC	1 cut(s)	400
BciT130I	CCWGG	5 cut(s)	347, 804, 844, 1461, 1499
BciVI	GTATCC	1 cut(s)	1547
BclI	TGATCA	1 cut(s)	738
BcnI	CCSGG	2 cut(s)	240, 329
BcoDI	GTCTC	2 cut(s)	595, 1595
BfaI	CTAG	4 cut(s)	365, 615, 786, 1046
BfrI	CTTAAG	1 cut(s)	1700
BfuI	GTATCC	1 cut(s)	1547
BisI	GCNGC	8 cut(s)	285, 415, 445, 501, 790, 840, 978, 1782
BlpI	GCTNAGC	1 cut(s)	936
BlsI	GCNGC	8 cut(s)	286, 416, 446, 502, 791, 841, 979, 1783
Bme1390I	CCNGG	7 cut(s)	240, 329, 347, 804, 844, 1461, 1499
Bme18I	GGWCC	4 cut(s)	298, 331, 800, 1837
BmeT110I	CYCGRG	1 cut(s)	622
BmgBI	CACGTC	1 cut(s)	322
BmgT120I	GGNCC	6 cut(s)	298, 331, 800, 1142, 1334, 1837
BmiI	GGNNCC	5 cut(s)	332, 352, 504, 1011, 1161
BmrFI	CCNGG	7 cut(s)	240, 329, 347, 804, 844, 1461, 1499
BmrI	ACTGGG	1 cut(s)	415
BmsI	GCATC	6 cut(s)	294, 565, 959, 1089, 1655, 1850
BmuI	ACTGGG	1 cut(s)	415
BpiI	GAAGAC	1 cut(s)	218
Bpu10I	CCTNAGC	2 cut(s)	687, 720
Bpu1102I	GCTNAGC	1 cut(s)	936
Bpu14I	TTCGAA	1 cut(s)	1220
BpuMI	CCSGG	2 cut(s)	240, 329
BsaAI	YACGTR	2 cut(s)	427, 1801
BsaBI	GATNNNNATC	2 cut(s)	308, 1436
BsaHI	GRCGYC	1 cut(s)	1604
BsaJI	CCNNGG	5 cut(s)	274, 346, 375, 843, 1735
BsaWI	WCCGGW	1 cut(s)	266
BsaXI	ACNNNNNCTCC	4 cut(s)	335, 365, 473, 503
Bsc4I	CCNNNNNNNGG	3 cut(s)	541, 849, 1328
Bse1I	ACTGG	2 cut(s)	421, 1725
Bse3DI	GCAATG	1 cut(s)	11
Bse8I	GATNNNNATC	2 cut(s)	308, 1436
BseBI	CCWGG	5 cut(s)	347, 804, 844, 1461, 1499
BseDI	CCNNGG	5 cut(s)	274, 346, 375, 843, 1735
BseGI	GGATG	3 cut(s)	670, 1158, 1865
BseJI	GATNNNNATC	2 cut(s)	308, 1436
BseLI	CCNNNNNNNGG	3 cut(s)	541, 849, 1328
BseMI	GCAATG	1 cut(s)	11
BseMII	CTCAG	4 cut(s)	395, 576, 734, 927
BseNI	ACTGG	2 cut(s)	421, 1725
BsePI	GCGCGC	1 cut(s)	287
BseRI	GAGGAG	4 cut(s)	392, 1181, 1344, 1829
BseX3I	CGGCCG	1 cut(s)	412
BseXI	GCAGC	4 cut(s)	456, 801, 826, 1768
Bsh1236I	CGCG	4 cut(s)	284, 289, 417, 569
Bsh1285I	CGRYCG	1 cut(s)	415
BshFI	GGCC	5 cut(s)	273, 414, 1069, 1143, 1336
BsiEI	CGRYCG	1 cut(s)	415
BsiHKAI	GWGCWC	2 cut(s)	410, 946
BsiHKCI	CYCGRG	1 cut(s)	622
BsiSI	CCGG	4 cut(s)	240, 267, 328, 411
BslFI	GGGAC	2 cut(s)	415, 973
BslI	CCNNNNNNNGG	3 cut(s)	541, 849, 1328
BsmAI	GTCTC	2 cut(s)	595, 1595
BsmBI	CGTCTC	1 cut(s)	1595
BsmFI	GGGAC	2 cut(s)	415, 973
BsmI	GAATGC	3 cut(s)	387, 777, 1648
BsnI	GGCC	5 cut(s)	273, 414, 1069, 1143, 1336
BsoBI	CYCGRG	1 cut(s)	622
Bsp119I	TTCGAA	1 cut(s)	1220
Bsp1286I	GDGCHC	3 cut(s)	353, 410, 946
Bsp143I	GATC	8 cut(s)	189, 214, 309, 361, 738, 1205, 1231, 1463
Bsp1720I	GCTNAGC	1 cut(s)	936
BspACI	CCGC	8 cut(s)	27, 284, 415, 479, 500, 977, 1365, 1779
BspANI	GGCC	5 cut(s)	273, 414, 1069, 1143, 1336
BspCNI	CTCAG	4 cut(s)	396, 577, 733, 928
BspFNI	CGCG	4 cut(s)	284, 289, 417, 569
BspLI	GGNNCC	5 cut(s)	332, 352, 504, 1011, 1161
BspPI	GGATC	4 cut(s)	184, 304, 1239, 1471
BspT104I	TTCGAA	1 cut(s)	1220
BspTI	CTTAAG	1 cut(s)	1700
BsrDI	GCAATG	1 cut(s)	11
BsrI	ACTGG	2 cut(s)	421, 1725
BssECI	CCNNGG	5 cut(s)	274, 346, 375, 843, 1735
BssHII	GCGCGC	1 cut(s)	287
BssMI	GATC	8 cut(s)	189, 214, 309, 361, 738, 1205, 1231, 1463
BssNI	GRCGYC	1 cut(s)	1604
BssSI	CACGAG	1 cut(s)	1854
BssT1I	CCWWGG	1 cut(s)	1735
Bst2BI	CACGAG	1 cut(s)	1854
Bst2UI	CCWGG	5 cut(s)	347, 804, 844, 1461, 1499
Bst4CI	ACNGT	5 cut(s)	54, 221, 358, 964, 1167
Bst6I	CTCTTC	1 cut(s)	1593
BstACI	GRCGYC	1 cut(s)	1604
BstAFI	CTTAAG	1 cut(s)	1700
BstBAI	YACGTR	2 cut(s)	427, 1801
BstBI	TTCGAA	1 cut(s)	1220
BstC8I	GCNNGC	3 cut(s)	289, 942, 987
BstDEI	CTNAG	6 cut(s)	404, 585, 687, 720, 936, 1727
BstEII	GGTNACC	1 cut(s)	262
BstF5I	GGATG	3 cut(s)	670, 1158, 1865
BstFNI	CGCG	4 cut(s)	284, 289, 417, 569
BstHHI	GCGC	4 cut(s)	289, 291, 419, 925
BstKTI	GATC	8 cut(s)	192, 217, 312, 364, 741, 1208, 1234, 1466
BstMAI	GTCTC	2 cut(s)	595, 1595
BstMBI	GATC	8 cut(s)	189, 214, 309, 361, 738, 1205, 1231, 1463
BstMCI	CGRYCG	1 cut(s)	415
BstMWI	GCNNNNNNNGC	9 cut(s)	414, 450, 575, 716, 789, 845, 941, 974, 986
BstNI	CCWGG	5 cut(s)	347, 804, 844, 1461, 1499
BstNSI	RCATGY	2 cut(s)	774, 923
BstPI	GGTNACC	1 cut(s)	262
BstSCI	CCNGG	7 cut(s)	238, 327, 345, 802, 842, 1459, 1497
BstUI	CGCG	4 cut(s)	284, 289, 417, 569
BstV1I	GCAGC	4 cut(s)	456, 801, 826, 1768
BstV2I	GAAGAC	1 cut(s)	218
BstX2I	RGATCY	1 cut(s)	1463
BstXI	CCANNNNNNTGG	1 cut(s)	1627
BstYI	RGATCY	1 cut(s)	1463
BstZI	CGGCCG	1 cut(s)	412
BsuI	GTATCC	1 cut(s)	1547
BsuRI	GGCC	5 cut(s)	273, 414, 1069, 1143, 1336
BtrI	CACGTC	1 cut(s)	322
BtsCI	GGATG	3 cut(s)	670, 1158, 1865
BtsIMutI	CAGTG	1 cut(s)	59
Cac8I	GCNNGC	3 cut(s)	289, 942, 987
CaiI	CAGNNNCTG	1 cut(s)	307
CfoI	GCGC	4 cut(s)	289, 291, 419, 925
Cfr13I	GGNCC	6 cut(s)	298, 331, 800, 1142, 1334, 1837
CseI	GACGC	1 cut(s)	1335
CsiI	ACCWGGT	1 cut(s)	802
Csp6I	GTAC	4 cut(s)	424, 582, 862, 1457
CviAII	CATG	7 cut(s)	496, 647, 771, 920, 1526, 1638, 1834
CviQI	GTAC	4 cut(s)	424, 582, 862, 1457
DdeI	CTNAG	6 cut(s)	404, 585, 687, 720, 936, 1727
DpnI	GATC	8 cut(s)	191, 216, 311, 363, 740, 1207, 1233, 1465
DpnII	GATC	8 cut(s)	189, 214, 309, 361, 738, 1205, 1231, 1463
DraI	TTTAAA	1 cut(s)	1213
DrdI	GACNNNNNNGTC	1 cut(s)	1835
DseDI	GACNNNNNNGTC	1 cut(s)	1835
EaeI	YGGCCR	1 cut(s)	412
EagI	CGGCCG	1 cut(s)	412
Eam1104I	CTCTTC	1 cut(s)	1593
EarI	CTCTTC	1 cut(s)	1593
Ecl136II	GAGCTC	2 cut(s)	408, 944
EclXI	CGGCCG	1 cut(s)	412
Eco130I	CCWWGG	1 cut(s)	1735
Eco24I	GRGCYC	3 cut(s)	353, 410, 946
Eco47I	GGWCC	4 cut(s)	298, 331, 800, 1837
Eco52I	CGGCCG	1 cut(s)	412
Eco53kI	GAGCTC	2 cut(s)	408, 944
Eco57I	CTGAAG	4 cut(s)	1247, 1491, 1556, 1736
Eco88I	CYCGRG	1 cut(s)	622
Eco91I	GGTNACC	1 cut(s)	262
EcoICRI	GAGCTC	2 cut(s)	408, 944
EcoO65I	GGTNACC	1 cut(s)	262
EcoRI	GAATTC	1 cut(s)	86
EcoRII	CCWGG	5 cut(s)	345, 802, 842, 1459, 1497
EcoT14I	CCWWGG	1 cut(s)	1735
EcoT22I	ATGCAT	1 cut(s)	1648
EcoT38I	GRGCYC	3 cut(s)	353, 410, 946
ErhI	CCWWGG	1 cut(s)	1735
Esp3I	CGTCTC	1 cut(s)	1595
FaeI	CATG	7 cut(s)	499, 650, 774, 923, 1529, 1641, 1837
FaqI	GGGAC	2 cut(s)	415, 973
FatI	CATG	7 cut(s)	495, 646, 770, 919, 1525, 1637, 1833
FauI	CCCGC	2 cut(s)	20, 1786
FauNDI	CATATG	3 cut(s)	901, 1113, 1147
FbaI	TGATCA	1 cut(s)	738
Fnu4HI	GCNGC	8 cut(s)	285, 415, 445, 501, 790, 840, 978, 1782
FokI	GGATG	3 cut(s)	677, 1165, 1872
FriOI	GRGCYC	3 cut(s)	353, 410, 946
Fsp4HI	GCNGC	8 cut(s)	285, 415, 445, 501, 790, 840, 978, 1782
FspAI	RTGCGCAY	1 cut(s)	924
FspBI	CTAG	4 cut(s)	365, 615, 786, 1046
FspI	TGCGCA	1 cut(s)	924
GlaI	GCGC	4 cut(s)	288, 290, 418, 924
GluI	GCNGC	8 cut(s)	285, 415, 445, 501, 790, 840, 978, 1782
HaeIII	GGCC	5 cut(s)	273, 414, 1069, 1143, 1336
HapII	CCGG	4 cut(s)	240, 267, 328, 411
HgaI	GACGC	1 cut(s)	1335
HhaI	GCGC	4 cut(s)	289, 291, 419, 925
Hin1I	GRCGYC	1 cut(s)	1604
Hin1II	CATG	7 cut(s)	499, 650, 774, 923, 1529, 1641, 1837
Hin6I	GCGC	4 cut(s)	287, 289, 417, 923
HinP1I	GCGC	4 cut(s)	287, 289, 417, 923
HincII	GTYRAC	3 cut(s)	658, 1125, 1170
HindII	GTYRAC	3 cut(s)	658, 1125, 1170
HindIII	AAGCTT	1 cut(s)	1568
HinfI	GANTC	5 cut(s)	140, 336, 643, 668, 1188
HpaII	CCGG	4 cut(s)	240, 267, 328, 411
HphI	GGTGA	9 cut(s)	110, 196, 209, 254, 256, 748, 818, 884, 1705
Hpy166II	GTNNAC	3 cut(s)	658, 1125, 1170
Hpy188III	TCNNGA	6 cut(s)	301, 365, 1046, 1179, 1265, 1390
Hpy8I	GTNNAC	3 cut(s)	658, 1125, 1170
Hpy99I	CGWCG	4 cut(s)	225, 323, 362, 1609
HpyCH4III	ACNGT	5 cut(s)	54, 221, 358, 964, 1167
HpyCH4IV	ACGT	5 cut(s)	321, 426, 1382, 1604, 1800
HpyF10VI	GCNNNNNNNGC	9 cut(s)	414, 450, 575, 716, 789, 845, 941, 974, 986
HpyF3I	CTNAG	6 cut(s)	404, 585, 687, 720, 936, 1727
HpySE526I	ACGT	5 cut(s)	321, 426, 1382, 1604, 1800
Hsp92I	GRCGYC	1 cut(s)	1604
Hsp92II	CATG	7 cut(s)	499, 650, 774, 923, 1529, 1641, 1837
HspAI	GCGC	4 cut(s)	287, 289, 417, 923
Ksp22I	TGATCA	1 cut(s)	738
Kzo9I	GATC	8 cut(s)	189, 214, 309, 361, 738, 1205, 1231, 1463
LmnI	GCTCC	7 cut(s)	356, 413, 508, 537, 623, 1739, 1816
Lsp1109I	GCAGC	4 cut(s)	456, 801, 826, 1768
LweI	GCATC	6 cut(s)	294, 565, 959, 1089, 1655, 1850
MabI	ACCWGGT	1 cut(s)	802
MaeI	CTAG	4 cut(s)	365, 615, 786, 1046
MaeII	ACGT	5 cut(s)	321, 426, 1382, 1604, 1800
MaeIII	GTNAC	5 cut(s)	116, 242, 262, 1383, 1705
MalI	GATC	8 cut(s)	191, 216, 311, 363, 740, 1207, 1233, 1465
MboI	GATC	8 cut(s)	189, 214, 309, 361, 738, 1205, 1231, 1463
MboII	GAAGA	5 cut(s)	116, 218, 452, 740, 1610
MfeI	CAATTG	2 cut(s)	1104, 1284
MflI	RGATCY	1 cut(s)	1463
MhlI	GDGCHC	3 cut(s)	353, 410, 946
MlyI	GAGTC	3 cut(s)	134, 677, 1182
Mph1103I	ATGCAT	1 cut(s)	1648
MseI	TTAA	4 cut(s)	756, 1212, 1653, 1701
MslI	CAYNNNNRTG	1 cut(s)	930
MspA1I	CMGCKG	1 cut(s)	1781
MspCI	CTTAAG	1 cut(s)	1700
MspI	CCGG	4 cut(s)	240, 267, 328, 411
MspR9I	CCNGG	7 cut(s)	240, 329, 347, 804, 844, 1461, 1499
MunI	CAATTG	2 cut(s)	1104, 1284
Mva1269I	GAATGC	3 cut(s)	387, 777, 1648
MvaI	CCWGG	5 cut(s)	347, 804, 844, 1461, 1499
MvnI	CGCG	4 cut(s)	284, 289, 417, 569
MwoI	GCNNNNNNNGC	9 cut(s)	414, 450, 575, 716, 789, 845, 941, 974, 986
NciI	CCSGG	2 cut(s)	240, 329
NdeI	CATATG	3 cut(s)	901, 1113, 1147
NdeII	GATC	8 cut(s)	189, 214, 309, 361, 738, 1205, 1231, 1463
NlaIII	CATG	7 cut(s)	499, 650, 774, 923, 1529, 1641, 1837
NlaIV	GGNNCC	5 cut(s)	332, 352, 504, 1011, 1161
NmeAIII	GCCGAG	1 cut(s)	299
NmuCI	GTSAC	3 cut(s)	116, 242, 262
NsbI	TGCGCA	1 cut(s)	924
NsiI	ATGCAT	1 cut(s)	1648
NspI	RCATGY	2 cut(s)	774, 923
NspV	TTCGAA	1 cut(s)	1220
PalAI	GGCGCGCC	1 cut(s)	287
PauI	GCGCGC	1 cut(s)	287
PciI	ACATGT	1 cut(s)	770
PcsI	WCGNNNNNNNCGW	1 cut(s)	432
PctI	GAATGC	3 cut(s)	387, 777, 1648
PfeI	GAWTC	2 cut(s)	336, 643
PflFI	GACNNNGTC	1 cut(s)	1835
PkrI	GCNGC	8 cut(s)	286, 416, 446, 502, 791, 841, 979, 1783
PleI	GAGTC	3 cut(s)	134, 676, 1182
PpsI	GAGTC	3 cut(s)	134, 676, 1182
Ppu21I	YACGTR	2 cut(s)	427, 1801
PscI	ACATGT	1 cut(s)	770
PsiI	TTATAA	1 cut(s)	998
Psp124BI	GAGCTC	2 cut(s)	410, 946
Psp6I	CCWGG	5 cut(s)	345, 802, 842, 1459, 1497
PspEI	GGTNACC	1 cut(s)	262
PspGI	CCWGG	5 cut(s)	345, 802, 842, 1459, 1497
PspN4I	GGNNCC	5 cut(s)	332, 352, 504, 1011, 1161
PspPI	GGNCC	6 cut(s)	298, 331, 800, 1142, 1334, 1837
PstNI	CAGNNNCTG	1 cut(s)	307
PsuI	RGATCY	1 cut(s)	1463
PsyI	GACNNNGTC	1 cut(s)	1835
PteI	GCGCGC	1 cut(s)	287
RsaI	GTAC	4 cut(s)	425, 583, 863, 1458
RsaNI	GTAC	4 cut(s)	424, 582, 862, 1457
RseI	CAYNNNNRTG	1 cut(s)	930
SacI	GAGCTC	2 cut(s)	410, 946
SaqAI	TTAA	4 cut(s)	756, 1212, 1653, 1701
SatI	GCNGC	8 cut(s)	285, 415, 445, 501, 790, 840, 978, 1782
Sau3AI	GATC	8 cut(s)	189, 214, 309, 361, 738, 1205, 1231, 1463
Sau96I	GGNCC	6 cut(s)	298, 331, 800, 1142, 1334, 1837
SchI	GAGTC	3 cut(s)	134, 677, 1182
ScrFI	CCNGG	7 cut(s)	240, 329, 347, 804, 844, 1461, 1499
SduI	GDGCHC	3 cut(s)	353, 410, 946
SexAI	ACCWGGT	1 cut(s)	802
SfaNI	GCATC	6 cut(s)	294, 565, 959, 1089, 1655, 1850
SfuI	TTCGAA	1 cut(s)	1220
SgsI	GGCGCGCC	1 cut(s)	287
SinI	GGWCC	4 cut(s)	298, 331, 800, 1837
SmiMI	CAYNNNNRTG	1 cut(s)	930
SmlI	CTYRAG	1 cut(s)	1700
SmoI	CTYRAG	1 cut(s)	1700
SsiI	CCGC	8 cut(s)	27, 284, 415, 479, 500, 977, 1365, 1779
SspMI	CTAG	4 cut(s)	365, 615, 786, 1046
SstI	GAGCTC	2 cut(s)	410, 946
StyD4I	CCNGG	7 cut(s)	238, 327, 345, 802, 842, 1459, 1497
StyI	CCWWGG	1 cut(s)	1735
TaaI	ACNGT	5 cut(s)	54, 221, 358, 964, 1167
TaiI	ACGT	5 cut(s)	324, 429, 1385, 1607, 1803
TaqI	TCGA	7 cut(s)	360, 435, 636, 1178, 1220, 1234, 1842
TaqII	GACCGA	1 cut(s)	532
TatI	WGTACW	2 cut(s)	581, 861
TauI	GCSGC	4 cut(s)	287, 417, 503, 980
TfiI	GAWTC	2 cut(s)	336, 643
Tru1I	TTAA	4 cut(s)	756, 1212, 1653, 1701
Tru9I	TTAA	4 cut(s)	756, 1212, 1653, 1701
TscAI	CASTG	1 cut(s)	59
TseFI	GTSAC	3 cut(s)	116, 242, 262
TseI	GCWGC	4 cut(s)	444, 789, 839, 1781
Tsp45I	GTSAC	3 cut(s)	116, 242, 262
TspDTI	ATGAA	8 cut(s)	49, 635, 1077, 1169, 1510, 1514, 1623, 1777
TspGWI	ACGGA	2 cut(s)	94, 813
TspRI	CASTG	1 cut(s)	59
Tth111I	GACNNNGTC	1 cut(s)	1835
Vha464I	CTTAAG	1 cut(s)	1700
VpaK11BI	GGWCC	4 cut(s)	298, 331, 800, 1837
XapI	RAATTY	3 cut(s)	86, 109, 1889
XbaI	TCTAGA	2 cut(s)	364, 1045
XceI	RCATGY	2 cut(s)	774, 923
XspI	CTAG	4 cut(s)	365, 615, 786, 1046
ZraI	GACGTC	1 cut(s)	1605
Zsp2I	ATGCAT	1 cut(s)	1648

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.