Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0003373

Physical Location & Seq

Genomic Coordinates Forward (+)

2108104 .. 2114350

Gene Structure 6247 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g03760.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3018 bp

ATGGAGCCCGCGGCGGGGCCGCTGCCGGACAAGCTGCGGTGCACGAGGACCGACGGCCGGCGATGGCGGTGCAAGAGGAGAGTGATGGAGAACATGAAGCTCTGCGAGATTCACTACCTGCAGGGCCGGCACCGCCAGTACAGGGAGAAGGTGCCGGAGGACCTCAAGATTCAGAGGAAGACGCAGACGGCGCCGTGCGAGGATCGGGACAACGCTGCCGCCGGCGACGGCGGCGGCGGAGGAGGAGGAGCAGAAATGAAGGCGCAGATGGAGAAGGTGGAGGATTTGGTGACGCTGATGAAGCGGAAGAGGGCGGAGGAGCCGTCGCCGGGGGCGGTGAAGATTAAGAAGGCGAAGGTGAAGAAGAAGAAGAAGAAGAAGAAGTCAAAGAAGGGAGGAGGGAGTGAGAAGAAGTGTGAGCTGAATTTGGAGCTGATAAGGATGGTGCTGAAGAGAGAGGTGGAGAAGAGGAACACGCCGAAGAAGAAGAAGAGGAGTGATGAGGAGGAAGAGGAGGAAGGGGTTGATCTCACCAGAGACTTGCCTAATGGAAGAATGGCGATTTCGTCTTCGTCTTCGCAGTCTTTGGGAGGCAATGTAGGTTCCAATTCGGCTTCGGATGTAAGAGTTGGGGCCGAATTAGGGCCGCCTGCGGCGGGTACTGCTACGCGGCGGTGCTTTCGGTCCAAGAACATTGAGCCAATGCCGGTTGGCACAGTGCAGGTTTTGCCGTGTGGTGATGAGAATGAGGGGAGATTGAGGAAGAGTAGGAGAAAGAGGTGCCATTGGTGTCAGAGAAGTGGAAGTAGTGCTTCTGCGGGATTGATTAAGTGTTCGAGTTGTAAGAAGCACTTGTTTTGCTTGAGCTGCATCAAAGAAAGGTACTTTGATACGCAAGAAGAAGTCAAAATGTCATGTCCGGTTTGTCGAGGAACTTGCCCCTGTAAGGAATGCTCTGAGAATCAACCTAAAGGTGCTGAAAGTAAGGATTATGTGGGGGTTAAAAATAAAGTTGAAGTTATATTACACTTCCATTACCTTGTATGTATGCTTCTCCCTGTGCTGAAACAAATAAACCAAGACCAGAAGTTTGAGTTGGAAGCAGAGGCAAAAATGAGGGGAAAAAAGCTCTCTGAAGTTTATATCAAGCAGGCTGAATTTAGCTGCAGTGTGCAAAACTGCTGCAATAAATGCAAAGCTTCCATTGTGGATCTTCATAGAAGCTGCCCAAATTGTTCCTATAACCTTTGTTTAAGCTGTTGTCGAGATCAGTTTCATGGGACTTTCCGGGGAGGTGTAAATGCATTTCTCTCAAGGTGCTCTAATACAAATGATGCTTGGGTCTCTGGTAACGGGAAAGTTTTGAAGAGGCCAATAACTACCCAAAAGCAAAATGCCCGCTACATTTCGTCATTTGCATCAGTAACAAACTGGAAGGCGTGTAATGCTGTTGATGGTATATCTTGCCCGCCCAAGGAGTTTGGTGGTTGTGGTGACAACTTCCTTGATTTGAGATGTTTTTTTCCTTTAAGTTGGATCAAAGAGCTAGAAGTAAGTGCAGAAGAAATAGTTTGCAGCTATGAGTTTCCAGAAACTTCAGACATGTCATTGAGCTGCCCTCTTTGTTTGGACACAGACCAAAATGTTAATGGACTTCGACAGTTGCAAGAAGCTGCTCTGAGAGAAAATTCAAATGATAACCATCTATTCTACCCCACGCTTTTAGACATGCATGGTGATAATGTTGAACATTTTCAGAAGCACTGGAGTAAAGGCCATCCTGTTATAGTCCGAGATGTCCTTCAGACTACGTCAGAGTTGAGTTGGGATCCAGTATTCATGTTCTGCACTTATCTTGAGAGGAGCATTGCTAGATATGAAAATAACAAGAATTCCCAGGAAGCTATCCATTGCCTGGATTGGTGTGAGGTGGAAATGGGGATCAGGCAGTATTTTATGGGTTCGTTGAACGGGCGAACACAAAGAAATAGTTGGAATGAGACCCTGAAATTGAAGGGTTGGCTTTCTTCGCAATTATTTCAAGAACAGTTTCCAGCTCATTATTCTGAAATCATGCATGCTCTACCACTTCAAGAATACATGAATCCCACGTCTGGTCTTTTGAATGTTGCTGCAAGGATGCCACAGGAAATTTCAAAACCTGATCTAGGTCCATGTGTTTATATTTCGTATGGCTGTAGTGAGCAATTCGTACAGGCTGATTCAGTGATAAATCTGTGTTACGACTCGTATGATGTGGTTAATATTTTGGCACATACATCAGATGCTCCTATTTCTGATGAACAAGTTTCTAAAATAAGGAAGTTACTGAAAAGGCACAATCAAAATCAGAGGGAGGCTTCTAAGAATACTTCTGATCAAACTAGAGCAAGAAAAGTGAATGGAAATTCAGCATTGCATAGTCAACAAGTGAGGTCACATAATGTGATTGGAGAAGAGATGCATTTACGGAAAAGAATTGCTAGAGGATCTTGCTTCTCTGCTGCAACGCATGAAGAATGCACTACGAATCTGAGAGAGAGTAATATGTCATTTGATGGGGAATCTGATGTTGATTCTGAGGCCACATTGAGTTGCTCTAGGTCTATCAATGGTGATGAAACATCTGAAGATGAGGAGTCTCCGGATCTCCTTGAAAGCTCAAATGGCTGTGAAAAACCTTTTGTAGAGTCATGCACTGCACAGTGGGATGTTTTCCGCCGGCAAGATGTTCCAAAGCTTATAGAATATCTCAGAAGGCACTCTAATGAATTTAATCATAAATATGACGTTCAAAAGCATGTTGATCATCCAATTTTTGATCAGAGTTTCTTTCTAGACTCGATTCACAAAATAAGACTCAAGGAGGAGTTTAAAATTGAACCTTGGACTTTTGAGCAACACATCGGAGAAGCTGTCATCATCCCTGCTGGATGCCCGTACCAGATTAGTAGTCCTAAGATGAAGTACGGCTCCTTCCAGAAGCTCACAAAGCAAAAGTGGACAAGCTGGAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000785 GO:0000976 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0006325 GO:0006355 GO:0006464 GO:0006482 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008214 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0016043 GO:0016569 GO:0016570 GO:0016577 GO:0019219 GO:0019222 GO:0019538 GO:0031323 GO:0031326 GO:0031490 GO:0031974 GO:0031981 GO:0032451 GO:0032452 GO:0032454 GO:0033169 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051276 GO:0060255 GO:0065007 GO:0070013 GO:0070076 GO:0070988 GO:0071704 GO:0071840 GO:0080090 GO:0097159 GO:0140096 GO:1901363 GO:1901564 GO:1903506 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04714 map04714

Pfam Domains

Protein Families

JmjC WRC

Protein Analysis

1006

Amino Acids

114.06

Weight (kDa)

8.55

Isoelectric Point (pI)

59.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
JmjC	PF02373	595 - 693	4.9e-12	JmjC domain, hydroxylase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0003373)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G21430
fragaria_vesca	FvH4_3g03760 FvH4_3g03760 FvH4_3g03760 FvH4_3g03760 FvH4_3g03760 FvH4_3g03760
malus_domestica	MD05G1326700.v1.1 MD10G1304800.v1.1
prunus_persica	Prupe.4G034800_v2.0.a1 Prupe.4G034800_v2.0.a1 Prupe.4G034800_v2.0.a1 Prupe.4G034800_v2.0.a1 Prupe.4G034800_v2.0.a1 Prupe.4G034800_v2.0.a1 Prupe.4G034800_v2.0.a1
pyrus_communis	pycom05g30110 pycom10g25720
rosa_chinensis	RchiOBHm_Chr5g0005871
rosa_laevigata	RLG00000016376 RLG00000031332 RLG00000031334 RLG00000031337 RLG00000031345 RLG00000031346 RLG00000031385
rosa_multiflora	Rmu_sc0002694.1_g000004
rosa_roxburghii	Rroxscaffold_1G00070030
rosa_rugosa	Rorug04G0418700 Rorug04G0418800 Rorug04G0418900
rosa_samantha	Rh5AG046200 Rh5BG044900 Rh5CG053800 Rh5DG044700
rosa_wichuraiana	Rw5G004640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	126, 712
AccB1I	GGYRCC	4 cut(s)	129, 151, 190, 780
AccB7I	CCANNNNNTGG	1 cut(s)	1915
AccII	CGCG	2 cut(s)	11, 670
AccIII	TCCGGA	1 cut(s)	2644
AclWI	GGATC	8 cut(s)	210, 1218, 1544, 1823, 1836, 1949, 2497, 2655
AcoI	YGGCCR	1 cut(s)	55
AcsI	RAATTY	7 cut(s)	424, 1157, 1687, 1891, 2151, 2407, 2771
AcuI	CTGAAG	5 cut(s)	470, 1155, 1581, 1787, 2649
AcyI	GRCGYC	1 cut(s)	191
AfaI	GTAC	6 cut(s)	140, 661, 884, 2214, 2942, 2969
AflIII	ACRYGT	1 cut(s)	1602
AjiI	CACGTC	1 cut(s)	2112
AjnI	CCWGG	2 cut(s)	1896, 1914
AjuI	GAANNNNNNNTTGG	2 cut(s)	1079, 1111
Alw21I	GWGCWC	2 cut(s)	44, 1322
Alw26I	GTCTC	4 cut(s)	531, 1348, 1994, 2646
Alw44I	GTGCAC	1 cut(s)	40
AlwI	GGATC	8 cut(s)	210, 1218, 1544, 1823, 1836, 1949, 2497, 2655
Aor13HI	TCCGGA	1 cut(s)	2644
AoxI	GGCC	8 cut(s)	17, 55, 124, 633, 644, 1370, 1774, 2583
ApaLI	GTGCAC	1 cut(s)	40
ApoI	RAATTY	7 cut(s)	424, 1157, 1687, 1891, 2151, 2407, 2771
ArsI	GACNNNNNNTTYG	2 cut(s)	1073, 1105
Asp700I	GAANNNNTTC	2 cut(s)	1752, 2049
AspLEI	GCGC	2 cut(s)	193, 265
AspS9I	GGNCC	8 cut(s)	17, 48, 124, 160, 633, 644, 684, 2171
AsuC2I	CCSGG	2 cut(s)	330, 1289
AsuHPI	GGTGA	8 cut(s)	301, 349, 370, 523, 749, 1505, 1748, 2627
AvaII	GGWCC	4 cut(s)	48, 160, 684, 2171
BaeGI	GKGCMC	1 cut(s)	44
BamHI	GGATCC	1 cut(s)	1828
BanI	GGYRCC	4 cut(s)	129, 151, 190, 780
BanII	GRGCYC	1 cut(s)	9
BarI	GAAGNNNNNNTAC	6 cut(s)	1008, 1035, 1040, 1067, 2960, 2992
BauI	CACGAG	1 cut(s)	43
BbsI	GAAGAC	3 cut(s)	185, 561, 567
Bbv12I	GWGCWC	2 cut(s)	44, 1322
BccI	CCATC	8 cut(s)	57, 79, 262, 436, 1448, 1710, 1785, 2552
BceAI	ACGGC	7 cut(s)	70, 178, 204, 244, 307, 715, 2986
BcgI	CGANNNNNNTGC	4 cut(s)	51, 85, 918, 952
BciT130I	CCWGG	2 cut(s)	1898, 1916
BclI	TGATCA	3 cut(s)	2377, 2806, 2821
BcnI	CCSGG	2 cut(s)	330, 1289
BcoDI	GTCTC	4 cut(s)	531, 1348, 1994, 2646
BfaI	CTAG	7 cut(s)	1547, 1872, 2168, 2385, 2484, 2601, 2837
BfmI	CTRYAG	3 cut(s)	119, 1165, 2197
BfoI	RGCGCY	1 cut(s)	194
BfuAI	ACCTGC	2 cut(s)	126, 712
Bme1390I	CCNGG	4 cut(s)	330, 1289, 1898, 1916
Bme18I	GGWCC	4 cut(s)	48, 160, 684, 2171
BmgBI	CACGTC	1 cut(s)	2112
BmgT120I	GGNCC	8 cut(s)	17, 48, 124, 160, 633, 644, 684, 2171
BmrFI	CCNGG	4 cut(s)	330, 1289, 1898, 1916
BmsI	GCATC	7 cut(s)	879, 1324, 1427, 2130, 2275, 2451, 2924
BpiI	GAAGAC	3 cut(s)	185, 561, 567
BplI	GAGNNNNNCTC	2 cut(s)	1603, 1635
BpmI	CTGGAG	1 cut(s)	1786
BpuEI	CTTGAG	5 cut(s)	149, 883, 1297, 1877, 2846
BpuMI	CCSGG	2 cut(s)	330, 1289
BsaBI	GATNNNNATC	1 cut(s)	1701
BsaHI	GRCGYC	1 cut(s)	191
BsaI	GGTCTC	2 cut(s)	1348, 1994
BsaJI	CCNNGG	6 cut(s)	9, 329, 1288, 1473, 1896, 2885
BsaWI	WCCGGW	2 cut(s)	919, 2644
BsaXI	ACNNNNNCTCC	6 cut(s)	308, 338, 582, 612, 2901, 2931
Bse118I	RCCGGY	5 cut(s)	57, 126, 221, 706, 2721
Bse1I	ACTGG	4 cut(s)	136, 1436, 1769, 1832
Bse3DI	GCAATG	4 cut(s)	601, 1866, 1909, 2414
Bse8I	GATNNNNATC	1 cut(s)	1701
BseAI	TCCGGA	1 cut(s)	2644
BseBI	CCWGG	2 cut(s)	1898, 1916
BseDI	CCNNGG	6 cut(s)	9, 329, 1288, 1473, 1896, 2885
BseGI	GGATG	8 cut(s)	447, 625, 1777, 2145, 2716, 2809, 2922, 2939
BseJI	GATNNNNATC	1 cut(s)	1701
BseMI	GCAATG	4 cut(s)	601, 1866, 1909, 2414
BseMII	CTCAG	5 cut(s)	948, 1670, 2525, 2571, 2767
BseNI	ACTGG	4 cut(s)	136, 1436, 1769, 1832
BseSI	GKGCMC	1 cut(s)	44
BseX3I	CGGCCG	1 cut(s)	55
BsgI	GTGCAG	4 cut(s)	740, 1578, 1831, 2685
Bsh1236I	CGCG	2 cut(s)	11, 670
Bsh1285I	CGRYCG	1 cut(s)	58
BshFI	GGCC	8 cut(s)	19, 57, 126, 635, 646, 1372, 1776, 2585
BshNI	GGYRCC	4 cut(s)	129, 151, 190, 780
BsiEI	CGRYCG	1 cut(s)	58
BsiHKAI	GWGCWC	2 cut(s)	44, 1322
BslFI	GGGAC	2 cut(s)	221, 1294
BsmAI	GTCTC	4 cut(s)	531, 1348, 1994, 2646
BsmFI	GGGAC	2 cut(s)	221, 1294
BsmI	GAATGC	2 cut(s)	956, 2525
BsnI	GGCC	8 cut(s)	19, 57, 126, 635, 646, 1372, 1776, 2585
Bso31I	GGTCTC	2 cut(s)	1348, 1994
Bsp1286I	GDGCHC	3 cut(s)	9, 44, 1322
Bsp13I	TCCGGA	1 cut(s)	2644
BspANI	GGCC	8 cut(s)	19, 57, 126, 635, 646, 1372, 1776, 2585
BspCNI	CTCAG	5 cut(s)	949, 1671, 2526, 2572, 2766
BspEI	TCCGGA	1 cut(s)	2644
BspFNI	CGCG	2 cut(s)	11, 670
BspMAI	CTGCAG	2 cut(s)	123, 1169
BspMI	ACCTGC	2 cut(s)	126, 712
BspPI	GGATC	8 cut(s)	210, 1218, 1544, 1823, 1836, 1949, 2497, 2655
BspT107I	GGYRCC	4 cut(s)	129, 151, 190, 780
BspTNI	GGTCTC	2 cut(s)	1348, 1994
BsrDI	GCAATG	4 cut(s)	601, 1866, 1909, 2414
BsrFI	RCCGGY	5 cut(s)	57, 126, 221, 706, 2721
BsrI	ACTGG	4 cut(s)	136, 1436, 1769, 1832
BssAI	RCCGGY	5 cut(s)	57, 126, 221, 706, 2721
BssECI	CCNNGG	6 cut(s)	9, 329, 1288, 1473, 1896, 2885
BssNI	GRCGYC	1 cut(s)	191
BssSI	CACGAG	1 cut(s)	43
BssT1I	CCWWGG	2 cut(s)	1473, 2885
Bst2BI	CACGAG	1 cut(s)	43
Bst2UI	CCWGG	2 cut(s)	1898, 1916
Bst4CI	ACNGT	4 cut(s)	718, 1662, 2049, 2706
Bst6I	CTCTTC	8 cut(s)	302, 446, 461, 485, 504, 758, 1361, 2451
BstACI	GRCGYC	1 cut(s)	191
BstAPI	GCANNNNNTGC	2 cut(s)	727, 1191
BstDEI	CTNAG	7 cut(s)	957, 1679, 2364, 2534, 2580, 2753, 2958
BstDSI	CCRYGG	1 cut(s)	9
BstENI	CCTNNNNNAGG	1 cut(s)	2166
BstF5I	GGATG	8 cut(s)	447, 625, 1777, 2145, 2716, 2809, 2922, 2939
BstFNI	CGCG	2 cut(s)	11, 670
BstH2I	RGCGCY	1 cut(s)	194
BstHHI	GCGC	2 cut(s)	193, 265
BstMAI	GTCTC	4 cut(s)	531, 1348, 1994, 2646
BstMCI	CGRYCG	1 cut(s)	58
BstNI	CCWGG	2 cut(s)	1898, 1916
BstNSI	RCATGY	4 cut(s)	1606, 1732, 2081, 2804
BstSCI	CCNGG	4 cut(s)	328, 1287, 1896, 1914
BstSFI	CTRYAG	3 cut(s)	119, 1165, 2197
BstSLI	GKGCMC	1 cut(s)	44
BstUI	CGCG	2 cut(s)	11, 670
BstV2I	GAAGAC	3 cut(s)	185, 561, 567
BstX2I	RGATCY	4 cut(s)	1210, 1828, 2489, 2647
BstYI	RGATCY	4 cut(s)	1210, 1828, 2489, 2647
BstZI	CGGCCG	1 cut(s)	55
BsuRI	GGCC	8 cut(s)	19, 57, 126, 635, 646, 1372, 1776, 2585
BtgI	CCRYGG	1 cut(s)	9
BtgZI	GCGATG	1 cut(s)	76
BtrI	CACGTC	1 cut(s)	2112
BtsCI	GGATG	8 cut(s)	447, 625, 1777, 2145, 2716, 2809, 2922, 2939
BtsI	GCAGTG	2 cut(s)	1174, 2697
BtsIMutI	CAGTG	6 cut(s)	723, 1174, 1762, 2232, 2697, 2711
BveI	ACCTGC	2 cut(s)	126, 712
CfoI	GCGC	2 cut(s)	193, 265
Cfr10I	RCCGGY	5 cut(s)	57, 126, 221, 706, 2721
Cfr13I	GGNCC	8 cut(s)	17, 48, 124, 160, 633, 644, 684, 2171
Cfr42I	CCGCGG	1 cut(s)	12
CseI	GACGC	2 cut(s)	190, 301
Csp6I	GTAC	6 cut(s)	139, 660, 883, 2213, 2941, 2968
CviQI	GTAC	6 cut(s)	139, 660, 883, 2213, 2941, 2968
DdeI	CTNAG	7 cut(s)	957, 1679, 2364, 2534, 2580, 2753, 2958
DinI	GGCGCC	1 cut(s)	192
DraI	TTTAAA	1 cut(s)	2875
EaeI	YGGCCR	1 cut(s)	55
EagI	CGGCCG	1 cut(s)	55
Eam1104I	CTCTTC	8 cut(s)	302, 446, 461, 485, 504, 758, 1361, 2451
EarI	CTCTTC	8 cut(s)	302, 446, 461, 485, 504, 758, 1361, 2451
EciI	GGCGGA	3 cut(s)	252, 329, 2708
EclXI	CGGCCG	1 cut(s)	55
Eco130I	CCWWGG	2 cut(s)	1473, 2885
Eco24I	GRGCYC	1 cut(s)	9
Eco31I	GGTCTC	2 cut(s)	1348, 1994
Eco47I	GGWCC	4 cut(s)	48, 160, 684, 2171
Eco52I	CGGCCG	1 cut(s)	55
Eco57I	CTGAAG	5 cut(s)	470, 1155, 1581, 1787, 2649
EcoNI	CCTNNNNNAGG	1 cut(s)	2166
EcoO109I	RGGNCCY	1 cut(s)	160
EcoRI	GAATTC	1 cut(s)	1891
EcoRII	CCWGG	2 cut(s)	1896, 1914
EcoT14I	CCWWGG	2 cut(s)	1473, 2885
EcoT22I	ATGCAT	4 cut(s)	1306, 1734, 2079, 2466
EcoT38I	GRGCYC	1 cut(s)	9
EgeI	GGCGCC	1 cut(s)	192
EheI	GGCGCC	1 cut(s)	192
ErhI	CCWWGG	2 cut(s)	1473, 2885
FalI	AAGNNNNNCTT	4 cut(s)	796, 828, 836, 868
FaqI	GGGAC	2 cut(s)	221, 1294
FauI	CCCGC	6 cut(s)	7, 16, 649, 811, 1406, 1476
FbaI	TGATCA	3 cut(s)	2377, 2806, 2821
FokI	GGATG	8 cut(s)	454, 632, 1764, 2152, 2723, 2796, 2909, 2946
FriOI	GRGCYC	1 cut(s)	9
FspBI	CTAG	7 cut(s)	1547, 1872, 2168, 2385, 2484, 2601, 2837
GlaI	GCGC	2 cut(s)	192, 264
GsuI	CTGGAG	1 cut(s)	1786
HaeII	RGCGCY	1 cut(s)	194
HaeIII	GGCC	8 cut(s)	19, 57, 126, 635, 646, 1372, 1776, 2585
HgaI	GACGC	2 cut(s)	190, 301
HhaI	GCGC	2 cut(s)	193, 265
Hin1I	GRCGYC	1 cut(s)	191
Hin6I	GCGC	2 cut(s)	191, 263
HinP1I	GCGC	2 cut(s)	191, 263
HincII	GTYRAC	1 cut(s)	2426
HindII	GTYRAC	1 cut(s)	2426
HindIII	AAGCTT	2 cut(s)	1197, 2738
HphI	GGTGA	8 cut(s)	301, 349, 370, 523, 749, 1505, 1748, 2627
Hpy166II	GTNNAC	3 cut(s)	42, 2426, 3003
Hpy8I	GTNNAC	3 cut(s)	42, 2426, 3003
Hpy99I	CGWCG	3 cut(s)	56, 230, 328
HpyCH4III	ACNGT	4 cut(s)	718, 1662, 2049, 2706
HpyCH4IV	ACGT	3 cut(s)	1811, 2111, 2790
HpyF3I	CTNAG	7 cut(s)	957, 1679, 2364, 2534, 2580, 2753, 2958
HpySE526I	ACGT	3 cut(s)	1811, 2111, 2790
Hsp92I	GRCGYC	1 cut(s)	191
HspAI	GCGC	2 cut(s)	191, 263
KasI	GGCGCC	1 cut(s)	190
Kpn2I	TCCGGA	1 cut(s)	2644
KroI	GCCGGC	4 cut(s)	57, 126, 221, 2721
KroNI	GCCGGC	4 cut(s)	59, 128, 223, 2723
Ksp22I	TGATCA	3 cut(s)	2377, 2806, 2821
KspI	CCGCGG	1 cut(s)	12
LmnI	GCTCC	7 cut(s)	4, 248, 319, 430, 1863, 2293, 2978
LweI	GCATC	7 cut(s)	879, 1324, 1427, 2130, 2275, 2451, 2924
MaeI	CTAG	7 cut(s)	1547, 1872, 2168, 2385, 2484, 2601, 2837
MaeII	ACGT	3 cut(s)	1811, 2111, 2790
MaeIII	GTNAC	7 cut(s)	289, 1349, 1423, 1493, 2240, 2325, 2436
MflI	RGATCY	4 cut(s)	1210, 1828, 2489, 2647
MhlI	GDGCHC	3 cut(s)	9, 44, 1322
Mly113I	GGCGCC	1 cut(s)	191
MlyI	GAGTC	5 cut(s)	2240, 2648, 2699, 2834, 2853
MmeI	TCCRAC	3 cut(s)	1077, 1514, 1973
Mph1103I	ATGCAT	4 cut(s)	1306, 1734, 2079, 2466
MreI	CGCCGGCG	1 cut(s)	221
MroI	TCCGGA	1 cut(s)	2644
MroNI	GCCGGC	4 cut(s)	57, 126, 221, 2721
MroXI	GAANNNNTTC	2 cut(s)	1752, 2049
MseI	TTAA	9 cut(s)	345, 828, 1002, 1253, 1529, 1647, 2262, 2775, 2874
MslI	CAYNNNNRTG	2 cut(s)	2766, 2784
MspA1I	CMGCKG	2 cut(s)	11, 22
MspR9I	CCNGG	4 cut(s)	330, 1289, 1898, 1916
Mva1269I	GAATGC	2 cut(s)	956, 2525
MvaI	CCWGG	2 cut(s)	1898, 1916
MvnI	CGCG	2 cut(s)	11, 670
NaeI	GCCGGC	4 cut(s)	59, 128, 223, 2723
NarI	GGCGCC	1 cut(s)	191
NciI	CCSGG	2 cut(s)	330, 1289
NgoMIV	GCCGGC	4 cut(s)	57, 126, 221, 2721
NmuCI	GTSAC	3 cut(s)	289, 1493, 2436
NsiI	ATGCAT	4 cut(s)	1306, 1734, 2079, 2466
NspI	RCATGY	4 cut(s)	1606, 1732, 2081, 2804
PaeI	GCATGC	1 cut(s)	2081
PciI	ACATGT	1 cut(s)	1602
PctI	GAATGC	2 cut(s)	956, 2525
PdiI	GCCGGC	4 cut(s)	59, 128, 223, 2723
PdmI	GAANNNNTTC	2 cut(s)	1752, 2049
PfeI	GAWTC	9 cut(s)	109, 169, 961, 2104, 2222, 2530, 2564, 2576, 2845
PflFI	GACNNNGTC	1 cut(s)	1810
PflMI	CCANNNNNTGG	1 cut(s)	1915
PleI	GAGTC	5 cut(s)	2240, 2647, 2698, 2834, 2853
PluTI	GGCGCC	1 cut(s)	194
PpsI	GAGTC	5 cut(s)	2240, 2647, 2698, 2834, 2853
PpuMI	RGGWCCY	1 cut(s)	160
PscI	ACATGT	1 cut(s)	1602
Psp5II	RGGWCCY	1 cut(s)	160
Psp6I	CCWGG	2 cut(s)	1896, 1914
PspGI	CCWGG	2 cut(s)	1896, 1914
PspPI	GGNCC	8 cut(s)	17, 48, 124, 160, 633, 644, 684, 2171
PspPPI	RGGWCCY	1 cut(s)	160
PstI	CTGCAG	2 cut(s)	123, 1169
PsuI	RGATCY	4 cut(s)	1210, 1828, 2489, 2647
PsyI	GACNNNGTC	1 cut(s)	1810
RsaI	GTAC	6 cut(s)	140, 661, 884, 2214, 2942, 2969
RsaNI	GTAC	6 cut(s)	139, 660, 883, 2213, 2941, 2968
RseI	CAYNNNNRTG	2 cut(s)	2766, 2784
SacII	CCGCGG	1 cut(s)	12
SaqAI	TTAA	9 cut(s)	345, 828, 1002, 1253, 1529, 1647, 2262, 2775, 2874
Sau96I	GGNCC	8 cut(s)	17, 48, 124, 160, 633, 644, 684, 2171
SbfI	CCTGCAGG	1 cut(s)	123
SchI	GAGTC	5 cut(s)	2240, 2648, 2699, 2834, 2853
ScrFI	CCNGG	4 cut(s)	330, 1289, 1898, 1916
SdaI	CCTGCAGG	1 cut(s)	123
SduI	GDGCHC	3 cut(s)	9, 44, 1322
SfaNI	GCATC	7 cut(s)	879, 1324, 1427, 2130, 2275, 2451, 2924
SfcI	CTRYAG	3 cut(s)	119, 1165, 2197
SfoI	GGCGCC	1 cut(s)	192
Sfr303I	CCGCGG	1 cut(s)	12
SgrAI	CRCCGGYG	1 cut(s)	221
SgrBI	CCGCGG	1 cut(s)	12
SinI	GGWCC	4 cut(s)	48, 160, 684, 2171
SmiMI	CAYNNNNRTG	2 cut(s)	2766, 2784
SmlI	CTYRAG	5 cut(s)	164, 862, 1312, 1856, 2861
SmoI	CTYRAG	5 cut(s)	164, 862, 1312, 1856, 2861
SphI	GCATGC	1 cut(s)	2081
Sse8387I	CCTGCAGG	1 cut(s)	123
SspDI	GGCGCC	1 cut(s)	190
SspI	AATATT	1 cut(s)	2266
SspMI	CTAG	7 cut(s)	1547, 1872, 2168, 2385, 2484, 2601, 2837
StyD4I	CCNGG	4 cut(s)	328, 1287, 1896, 1914
StyI	CCWWGG	2 cut(s)	1473, 2885
TaaI	ACNGT	4 cut(s)	718, 1662, 2049, 2706
TaiI	ACGT	3 cut(s)	1814, 2114, 2793
TaqI	TCGA	5 cut(s)	836, 928, 1264, 1657, 2843
TaqII	GACCGA	2 cut(s)	65, 672
TatI	WGTACW	1 cut(s)	138
TauI	GCSGC	8 cut(s)	14, 22, 221, 234, 237, 649, 656, 673
TfiI	GAWTC	9 cut(s)	109, 169, 961, 2104, 2222, 2530, 2564, 2576, 2845
Tru1I	TTAA	9 cut(s)	345, 828, 1002, 1253, 1529, 1647, 2262, 2775, 2874
Tru9I	TTAA	9 cut(s)	345, 828, 1002, 1253, 1529, 1647, 2262, 2775, 2874
TscAI	CASTG	6 cut(s)	723, 1174, 1769, 2232, 2704, 2711
TseFI	GTSAC	3 cut(s)	289, 1493, 2436
Tsp45I	GTSAC	3 cut(s)	289, 1493, 2436
TspGWI	ACGGA	1 cut(s)	2485
TspRI	CASTG	6 cut(s)	723, 1174, 1769, 2232, 2704, 2711
Tth111I	GACNNNGTC	1 cut(s)	1810
Van91I	CCANNNNNTGG	1 cut(s)	1915
VneI	GTGCAC	1 cut(s)	40
VpaK11BI	GGWCC	4 cut(s)	48, 160, 684, 2171
XagI	CCTNNNNNAGG	1 cut(s)	2166
XapI	RAATTY	7 cut(s)	424, 1157, 1687, 1891, 2151, 2407, 2771
XbaI	TCTAGA	1 cut(s)	2836
XceI	RCATGY	4 cut(s)	1606, 1732, 2081, 2804
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1646
XmnI	GAANNNNTTC	2 cut(s)	1752, 2049
XspI	CTAG	7 cut(s)	1547, 1872, 2168, 2385, 2484, 2601, 2837
Zsp2I	ATGCAT	4 cut(s)	1306, 1734, 2079, 2466

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.