Adenylate isopentenyltransferase-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G68460 |
| fragaria_vesca | FvH4_3g05590 FvH4_3g17710 FvH4_4g27230 |
| malus_domestica | MD13G1040600.v1.1 MD16G1041700.v1.1 |
| prunus_persica | Prupe.1G312400_v2.0.a1 |
| pyrus_communis | pycom13g03490 pycom16g03610 |
| rosa_chinensis | RchiOBHm_Chr4g0435021 RchiOBHm_Chr5g0029421 |
| rosa_laevigata | RLG00000006628 RLG00000033164 |
| rosa_multiflora | Rmu_sc0000400.1_g000020 Rmu_sc0001211.1_g000003 Rmu_sc0004373.1_g000012 Rmu_sc0007525.1_g000003 Rmu_sc0007525.1_g000009 Rmu_ssc0000309.1_g000055 |
| rosa_roxburghii | Rroxscaffold_5G00362790 Rroxscaffold_5G00376210 |
| rosa_rugosa | Rorug04G0281800 Rorug05G0114100 |
| rosa_samantha | Rh2CG411300 Rh4AG337200 Rh4BG345100 Rh4CG359900 Rh4DG339600 Rh5AG206200 Rh5BG204700 Rh5CG226700 Rh5DG208300 |
| rosa_wichuraiana | Rw4G029400 Rw5G018760 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 362 |
| AatII | GACGTC | 5 cut(s) | 141, 225, 360, 366, 776 |
| AccB1I | GGYRCC | 3 cut(s) | 26, 35, 448 |
| AccI | GTMKAC | 2 cut(s) | 339, 360 |
| AccII | CGCG | 6 cut(s) | 71, 73, 251, 463, 501, 743 |
| AccIII | TCCGGA | 1 cut(s) | 82 |
| AclWI | GGATC | 1 cut(s) | 732 |
| AcoI | YGGCCR | 2 cut(s) | 507, 520 |
| AcuI | CTGAAG | 1 cut(s) | 749 |
| AcvI | CACGTG | 1 cut(s) | 666 |
| AfaI | GTAC | 2 cut(s) | 404, 455 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 250, 529 |
| AflIII | ACRYGT | 1 cut(s) | 663 |
| AgeI | ACCGGT | 2 cut(s) | 342, 542 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 176 |
| AjiI | CACGTC | 1 cut(s) | 430 |
| AjuI | GAANNNNNNNTTGG | 3 cut(s) | 819, 851, 851 |
| AluBI | AGCT | 4 cut(s) | 10, 121, 397, 505 |
| AluI | AGCT | 4 cut(s) | 10, 121, 397, 505 |
| Alw21I | GWGCWC | 2 cut(s) | 300, 399 |
| Alw26I | GTCTC | 2 cut(s) | 229, 251 |
| AlwI | GGATC | 1 cut(s) | 732 |
| Ama87I | CYCGRG | 2 cut(s) | 279, 487 |
| Aor13HI | TCCGGA | 1 cut(s) | 82 |
| AoxI | GGCC | 4 cut(s) | 130, 507, 520, 839 |
| ApeKI | GCWGC | 2 cut(s) | 118, 411 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 342, 374 |
| AsiGI | ACCGGT | 2 cut(s) | 342, 542 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 863 |
| AspLEI | GCGC | 4 cut(s) | 29, 73, 256, 451 |
| AspS9I | GGNCC | 3 cut(s) | 130, 309, 839 |
| AsuC2I | CCSGG | 4 cut(s) | 280, 281, 293, 530 |
| AsuHPI | GGTGA | 3 cut(s) | 133, 148, 655 |
| AsuII | TTCGAA | 1 cut(s) | 348 |
| AvaI | CYCGRG | 2 cut(s) | 279, 487 |
| AvaII | GGWCC | 1 cut(s) | 309 |
| BanI | GGYRCC | 3 cut(s) | 26, 35, 448 |
| BanII | GRGCYC | 1 cut(s) | 399 |
| BbrPI | CACGTG | 1 cut(s) | 666 |
| Bbv12I | GWGCWC | 2 cut(s) | 300, 399 |
| BbvCI | CCTCAGC | 1 cut(s) | 707 |
| BbvI | GCAGC | 2 cut(s) | 130, 398 |
| BccI | CCATC | 4 cut(s) | 65, 667, 682, 757 |
| BceAI | ACGGC | 6 cut(s) | 228, 232, 388, 436, 535, 564 |
| BcnI | CCSGG | 4 cut(s) | 280, 281, 293, 530 |
| BcoDI | GTCTC | 2 cut(s) | 229, 251 |
| BfoI | RGCGCY | 2 cut(s) | 30, 452 |
| BisI | GCNGC | 9 cut(s) | 69, 119, 252, 384, 412, 464, 600, 620, 796 |
| BlsI | GCNGC | 9 cut(s) | 70, 120, 253, 385, 413, 465, 601, 621, 797 |
| Bme1390I | CCNGG | 4 cut(s) | 280, 281, 293, 530 |
| Bme18I | GGWCC | 1 cut(s) | 309 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 176 |
| BmeT110I | CYCGRG | 2 cut(s) | 279, 487 |
| BmgBI | CACGTC | 1 cut(s) | 430 |
| BmgT120I | GGNCC | 3 cut(s) | 130, 309, 839 |
| BmiI | GGNNCC | 5 cut(s) | 28, 37, 77, 310, 450 |
| BmrFI | CCNGG | 4 cut(s) | 280, 281, 293, 530 |
| BmsI | GCATC | 2 cut(s) | 105, 468 |
| Bpu10I | CCTNAGC | 1 cut(s) | 707 |
| Bpu14I | TTCGAA | 1 cut(s) | 348 |
| BpuMI | CCSGG | 4 cut(s) | 280, 281, 293, 530 |
| BsaAI | YACGTR | 1 cut(s) | 666 |
| BsaJI | CCNNGG | 3 cut(s) | 214, 279, 280 |
| BsaWI | WCCGGW | 5 cut(s) | 82, 342, 352, 399, 542 |
| BsaXI | ACNNNNNCTCC | 7 cut(s) | 191, 212, 221, 242, 386, 416, 863 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 250, 529 |
| Bse118I | RCCGGY | 4 cut(s) | 32, 38, 342, 542 |
| BseAI | TCCGGA | 1 cut(s) | 82 |
| BseDI | CCNNGG | 3 cut(s) | 214, 279, 280 |
| BseGI | GGATG | 1 cut(s) | 321 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 250, 529 |
| BseMII | CTCAG | 2 cut(s) | 539, 698 |
| BseRI | GAGGAG | 7 cut(s) | 217, 323, 488, 620, 623, 626, 639 |
| BseXI | GCAGC | 2 cut(s) | 130, 398 |
| Bsh1236I | CGCG | 6 cut(s) | 71, 73, 251, 463, 501, 743 |
| Bsh1285I | CGRYCG | 2 cut(s) | 343, 561 |
| BshFI | GGCC | 4 cut(s) | 132, 509, 522, 841 |
| BshNI | GGYRCC | 3 cut(s) | 26, 35, 448 |
| BshTI | ACCGGT | 2 cut(s) | 342, 542 |
| BsiEI | CGRYCG | 2 cut(s) | 343, 561 |
| BsiHKAI | GWGCWC | 2 cut(s) | 300, 399 |
| BsiHKCI | CYCGRG | 2 cut(s) | 279, 487 |
| BslFI | GGGAC | 3 cut(s) | 164, 275, 781 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 250, 529 |
| BsmAI | GTCTC | 2 cut(s) | 229, 251 |
| BsmBI | CGTCTC | 2 cut(s) | 229, 251 |
| BsmFI | GGGAC | 3 cut(s) | 164, 275, 781 |
| BsnI | GGCC | 4 cut(s) | 132, 509, 522, 841 |
| BsoBI | CYCGRG | 2 cut(s) | 279, 487 |
| Bsp119I | TTCGAA | 1 cut(s) | 348 |
| Bsp1286I | GDGCHC | 2 cut(s) | 300, 399 |
| Bsp13I | TCCGGA | 1 cut(s) | 82 |
| Bsp143I | GATC | 2 cut(s) | 558, 724 |
| Bsp68I | TCGCGA | 1 cut(s) | 501 |
| BspANI | GGCC | 4 cut(s) | 132, 509, 522, 841 |
| BspCNI | CTCAG | 2 cut(s) | 540, 699 |
| BspEI | TCCGGA | 1 cut(s) | 82 |
| BspFNI | CGCG | 6 cut(s) | 71, 73, 251, 463, 501, 743 |
| BspLI | GGNNCC | 5 cut(s) | 28, 37, 77, 310, 450 |
| BspPI | GGATC | 1 cut(s) | 732 |
| BspT104I | TTCGAA | 1 cut(s) | 348 |
| BspT107I | GGYRCC | 3 cut(s) | 26, 35, 448 |
| BsrFI | RCCGGY | 4 cut(s) | 32, 38, 342, 542 |
| BssAI | RCCGGY | 4 cut(s) | 32, 38, 342, 542 |
| BssECI | CCNNGG | 3 cut(s) | 214, 279, 280 |
| BssMI | GATC | 2 cut(s) | 558, 724 |
| Bst6I | CTCTTC | 4 cut(s) | 674, 725, 797, 822 |
| BstBAI | YACGTR | 1 cut(s) | 666 |
| BstBI | TTCGAA | 1 cut(s) | 348 |
| BstC8I | GCNNGC | 2 cut(s) | 503, 507 |
| BstDEI | CTNAG | 2 cut(s) | 548, 707 |
| BstDSI | CCRYGG | 1 cut(s) | 214 |
| BstEII | GGTNACC | 1 cut(s) | 154 |
| BstF5I | GGATG | 1 cut(s) | 321 |
| BstFNI | CGCG | 6 cut(s) | 71, 73, 251, 463, 501, 743 |
| BstH2I | RGCGCY | 2 cut(s) | 30, 452 |
| BstHHI | GCGC | 4 cut(s) | 29, 73, 256, 451 |
| BstKTI | GATC | 2 cut(s) | 561, 727 |
| BstMAI | GTCTC | 2 cut(s) | 229, 251 |
| BstMBI | GATC | 2 cut(s) | 558, 724 |
| BstMCI | CGRYCG | 2 cut(s) | 343, 561 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 33, 48, 498, 749, 758 |
| BstNSI | RCATGY | 2 cut(s) | 260, 496 |
| BstPI | GGTNACC | 1 cut(s) | 154 |
| BstSCI | CCNGG | 4 cut(s) | 278, 279, 291, 528 |
| BstUI | CGCG | 6 cut(s) | 71, 73, 251, 463, 501, 743 |
| BstV1I | GCAGC | 2 cut(s) | 130, 398 |
| BstX2I | RGATCY | 1 cut(s) | 724 |
| BstYI | RGATCY | 1 cut(s) | 724 |
| BsuRI | GGCC | 4 cut(s) | 132, 509, 522, 841 |
| BtgI | CCRYGG | 1 cut(s) | 214 |
| BtgZI | GCGATG | 1 cut(s) | 776 |
| BtrI | CACGTC | 1 cut(s) | 430 |
| BtsCI | GGATG | 1 cut(s) | 321 |
| BtuMI | TCGCGA | 1 cut(s) | 501 |
| Cac8I | GCNNGC | 2 cut(s) | 503, 507 |
| CfoI | GCGC | 4 cut(s) | 29, 73, 256, 451 |
| Cfr10I | RCCGGY | 4 cut(s) | 32, 38, 342, 542 |
| Cfr13I | GGNCC | 3 cut(s) | 130, 309, 839 |
| Cfr9I | CCCGGG | 1 cut(s) | 279 |
| CseI | GACGC | 4 cut(s) | 170, 180, 375, 749 |
| Csp6I | GTAC | 2 cut(s) | 403, 454 |
| CspAI | ACCGGT | 2 cut(s) | 342, 542 |
| CviAII | CATG | 3 cut(s) | 22, 257, 493 |
| CviQI | GTAC | 2 cut(s) | 403, 454 |
| DdeI | CTNAG | 2 cut(s) | 548, 707 |
| DinI | GGCGCC | 2 cut(s) | 28, 450 |
| DpnI | GATC | 2 cut(s) | 560, 726 |
| DpnII | GATC | 2 cut(s) | 558, 724 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 362 |
| DriI | GACNNNNNGTC | 1 cut(s) | 176 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 362 |
| EaeI | YGGCCR | 2 cut(s) | 507, 520 |
| Eam1104I | CTCTTC | 4 cut(s) | 674, 725, 797, 822 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 176 |
| EarI | CTCTTC | 4 cut(s) | 674, 725, 797, 822 |
| EciI | GGCGGA | 3 cut(s) | 220, 230, 617 |
| Ecl136II | GAGCTC | 1 cut(s) | 397 |
| Eco24I | GRGCYC | 1 cut(s) | 399 |
| Eco47I | GGWCC | 1 cut(s) | 309 |
| Eco53kI | GAGCTC | 1 cut(s) | 397 |
| Eco57I | CTGAAG | 1 cut(s) | 749 |
| Eco72I | CACGTG | 1 cut(s) | 666 |
| Eco88I | CYCGRG | 2 cut(s) | 279, 487 |
| Eco91I | GGTNACC | 1 cut(s) | 154 |
| EcoICRI | GAGCTC | 1 cut(s) | 397 |
| EcoO109I | RGGNCCY | 1 cut(s) | 130 |
| EcoO65I | GGTNACC | 1 cut(s) | 154 |
| EcoT38I | GRGCYC | 1 cut(s) | 399 |
| EgeI | GGCGCC | 2 cut(s) | 28, 450 |
| EheI | GGCGCC | 2 cut(s) | 28, 450 |
| Esp3I | CGTCTC | 2 cut(s) | 229, 251 |
| FaeI | CATG | 3 cut(s) | 25, 260, 496 |
| FaiI | YATR | 5 cut(s) | 23, 258, 494, 597, 631 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 851 |
| FaqI | GGGAC | 3 cut(s) | 164, 275, 781 |
| FatI | CATG | 3 cut(s) | 21, 256, 492 |
| FauI | CCCGC | 4 cut(s) | 189, 218, 299, 791 |
| FblI | GTMKAC | 2 cut(s) | 339, 360 |
| Fnu4HI | GCNGC | 9 cut(s) | 69, 119, 252, 384, 412, 464, 600, 620, 796 |
| FokI | GGATG | 1 cut(s) | 308 |
| FriOI | GRGCYC | 1 cut(s) | 399 |
| Fsp4HI | GCNGC | 9 cut(s) | 69, 119, 252, 384, 412, 464, 600, 620, 796 |
| GlaI | GCGC | 4 cut(s) | 28, 72, 255, 450 |
| GluI | GCNGC | 9 cut(s) | 69, 119, 252, 384, 412, 464, 600, 620, 796 |
| HaeII | RGCGCY | 2 cut(s) | 30, 452 |
| HaeIII | GGCC | 4 cut(s) | 132, 509, 522, 841 |
| HgaI | GACGC | 4 cut(s) | 170, 180, 375, 749 |
| HhaI | GCGC | 4 cut(s) | 29, 73, 256, 451 |
| Hin1II | CATG | 3 cut(s) | 25, 260, 496 |
| Hin6I | GCGC | 4 cut(s) | 27, 71, 254, 449 |
| HinP1I | GCGC | 4 cut(s) | 27, 71, 254, 449 |
| HincII | GTYRAC | 2 cut(s) | 340, 361 |
| HindII | GTYRAC | 2 cut(s) | 340, 361 |
| HinfI | GANTC | 2 cut(s) | 206, 485 |
| HphI | GGTGA | 3 cut(s) | 133, 148, 655 |
| Hpy166II | GTNNAC | 2 cut(s) | 340, 361 |
| Hpy188I | TCNGA | 9 cut(s) | 268, 394, 441, 540, 549, 563, 729, 778, 814 |
| Hpy188III | TCNNGA | 2 cut(s) | 83, 500 |
| Hpy8I | GTNNAC | 2 cut(s) | 340, 361 |
| HpyAV | CCTTC | 2 cut(s) | 100, 200 |
| HpyCH4IV | ACGT | 7 cut(s) | 138, 222, 357, 363, 429, 665, 773 |
| HpyCH4V | TGCA | 1 cut(s) | 118 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 33, 48, 498, 749, 758 |
| HpyF3I | CTNAG | 2 cut(s) | 548, 707 |
| HpySE526I | ACGT | 7 cut(s) | 138, 222, 357, 363, 429, 665, 773 |
| Hsp92II | CATG | 3 cut(s) | 25, 260, 496 |
| HspAI | GCGC | 4 cut(s) | 27, 71, 254, 449 |
| KasI | GGCGCC | 2 cut(s) | 26, 448 |
| Kpn2I | TCCGGA | 1 cut(s) | 82 |
| Kzo9I | GATC | 2 cut(s) | 558, 724 |
| LmnI | GCTCC | 3 cut(s) | 394, 402, 626 |
| Lsp1109I | GCAGC | 2 cut(s) | 130, 398 |
| LweI | GCATC | 2 cut(s) | 105, 468 |
| MaeII | ACGT | 7 cut(s) | 138, 222, 357, 363, 429, 665, 773 |
| MaeIII | GTNAC | 3 cut(s) | 45, 139, 154 |
| MalI | GATC | 2 cut(s) | 560, 726 |
| MboI | GATC | 2 cut(s) | 558, 724 |
| MboII | GAAGA | 5 cut(s) | 691, 742, 814, 839, 862 |
| MflI | RGATCY | 1 cut(s) | 724 |
| MhlI | GDGCHC | 2 cut(s) | 300, 399 |
| Mly113I | GGCGCC | 2 cut(s) | 27, 449 |
| MlyI | GAGTC | 2 cut(s) | 200, 479 |
| MmeI | TCCRAC | 3 cut(s) | 336, 372, 792 |
| MroI | TCCGGA | 1 cut(s) | 82 |
| MroXI | GAANNNNTTC | 1 cut(s) | 863 |
| MseI | TTAA | 2 cut(s) | 588, 756 |
| MspR9I | CCNGG | 4 cut(s) | 280, 281, 293, 530 |
| MvnI | CGCG | 6 cut(s) | 71, 73, 251, 463, 501, 743 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 33, 48, 498, 749, 758 |
| NarI | GGCGCC | 2 cut(s) | 27, 449 |
| NciI | CCSGG | 4 cut(s) | 280, 281, 293, 530 |
| NdeII | GATC | 2 cut(s) | 558, 724 |
| NlaIII | CATG | 3 cut(s) | 25, 260, 496 |
| NlaIV | GGNNCC | 5 cut(s) | 28, 37, 77, 310, 450 |
| NmeAIII | GCCGAG | 3 cut(s) | 174, 259, 535 |
| NmuCI | GTSAC | 3 cut(s) | 45, 139, 154 |
| NruI | TCGCGA | 1 cut(s) | 501 |
| NspI | RCATGY | 2 cut(s) | 260, 496 |
| NspV | TTCGAA | 1 cut(s) | 348 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 201, 333, 345, 354 |
| PdmI | GAANNNNTTC | 1 cut(s) | 863 |
| PflFI | GACNNNGTC | 1 cut(s) | 772 |
| PinAI | ACCGGT | 2 cut(s) | 342, 542 |
| PkrI | GCNGC | 9 cut(s) | 70, 120, 253, 385, 413, 465, 601, 621, 797 |
| Ple19I | CGATCG | 1 cut(s) | 561 |
| PleI | GAGTC | 2 cut(s) | 200, 479 |
| PluTI | GGCGCC | 2 cut(s) | 30, 452 |
| PmaCI | CACGTG | 1 cut(s) | 666 |
| PmlI | CACGTG | 1 cut(s) | 666 |
| PpsI | GAGTC | 2 cut(s) | 200, 479 |
| Ppu21I | YACGTR | 1 cut(s) | 666 |
| Psp124BI | GAGCTC | 1 cut(s) | 399 |
| PspCI | CACGTG | 1 cut(s) | 666 |
| PspEI | GGTNACC | 1 cut(s) | 154 |
| PspN4I | GGNNCC | 5 cut(s) | 28, 37, 77, 310, 450 |
| PspPI | GGNCC | 3 cut(s) | 130, 309, 839 |
| PsuI | RGATCY | 1 cut(s) | 724 |
| PsyI | GACNNNGTC | 1 cut(s) | 772 |
| PvuI | CGATCG | 1 cut(s) | 561 |
| RruI | TCGCGA | 1 cut(s) | 501 |
| RsaI | GTAC | 2 cut(s) | 404, 455 |
| RsaNI | GTAC | 2 cut(s) | 403, 454 |
| SacI | GAGCTC | 1 cut(s) | 399 |
| SalI | GTCGAC | 2 cut(s) | 338, 359 |
| SaqAI | TTAA | 2 cut(s) | 588, 756 |
| SatI | GCNGC | 9 cut(s) | 69, 119, 252, 384, 412, 464, 600, 620, 796 |
| Sau3AI | GATC | 2 cut(s) | 558, 724 |
| Sau96I | GGNCC | 3 cut(s) | 130, 309, 839 |
| SchI | GAGTC | 2 cut(s) | 200, 479 |
| ScrFI | CCNGG | 4 cut(s) | 280, 281, 293, 530 |
| SduI | GDGCHC | 2 cut(s) | 300, 399 |
| SfaNI | GCATC | 2 cut(s) | 105, 468 |
| SfoI | GGCGCC | 2 cut(s) | 28, 450 |
| SfuI | TTCGAA | 1 cut(s) | 348 |
| SgrDI | CGTCGACG | 1 cut(s) | 359 |
| SinI | GGWCC | 1 cut(s) | 309 |
| SmaI | CCCGGG | 1 cut(s) | 281 |
| SspDI | GGCGCC | 2 cut(s) | 26, 448 |
| SstI | GAGCTC | 1 cut(s) | 399 |
| StyD4I | CCNGG | 4 cut(s) | 278, 279, 291, 528 |
| TaiI | ACGT | 7 cut(s) | 141, 225, 360, 366, 432, 668, 776 |
| TaqI | TCGA | 9 cut(s) | 93, 135, 204, 339, 348, 360, 426, 483, 557 |
| TauI | GCSGC | 7 cut(s) | 71, 254, 386, 466, 602, 622, 798 |
| Tru1I | TTAA | 2 cut(s) | 588, 756 |
| Tru9I | TTAA | 2 cut(s) | 588, 756 |
| TseFI | GTSAC | 3 cut(s) | 45, 139, 154 |
| TseI | GCWGC | 2 cut(s) | 118, 411 |
| Tsp45I | GTSAC | 3 cut(s) | 45, 139, 154 |
| TspDTI | ATGAA | 1 cut(s) | 310 |
| TspGWI | ACGGA | 1 cut(s) | 761 |
| TspMI | CCCGGG | 1 cut(s) | 279 |
| Tth111I | GACNNNGTC | 1 cut(s) | 772 |
| VpaK11BI | GGWCC | 1 cut(s) | 309 |
| XceI | RCATGY | 2 cut(s) | 260, 496 |
| XmaI | CCCGGG | 1 cut(s) | 279 |
| XmiI | GTMKAC | 2 cut(s) | 339, 360 |
| XmnI | GAANNNNTTC | 1 cut(s) | 863 |
| ZraI | GACGTC | 5 cut(s) | 139, 223, 358, 364, 774 |