Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0003924

Physical Location & Seq

Genomic Coordinates Reverse (-)

2935618 .. 2936730

Gene Structure 1113 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1041700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1113 bp

ATGACACTTCATCCCTTCCCAACTCACTCCCTCCATTATTCCAATTTCAATTTCAATACGAATTATATCTCCCACCGTTTCCACTTGCTCCCGCAGCTCCACCACCTCTACAACCACCCCACTCATCCGCTTCACCTCCCCCAAAGGCCCCGCCGCTGGGCCCACATGGCCACCGGCCACACTTCCGCGGTCCCACGTCGAAAAGACAAGCTCCTCGTCATCATGGGGGCCACTGGCGCCGGCAAGTCCCGCCTCTCCCTCGACCTCGCCACCCGCTTCCCCTTCTTCGAAATCATCAACTCCGACAAAATACAACTCTACCGCGGCCTCGACATCACCACCAACAAGCTCCCCCTCCCGGAACGACTCGGCGTTCCCCACCACCTCCTCGGCGAGTTGGACCCCCGAGACGGAGATTTCACGCCCGCCGATTTTCGCGCCGTCGCCGGTCAGGTTGTTTCCGGCATTACGAATCGGAGGAAGGTGCCGATGCTCGTCGGCGGGTCAAACTCCTTCATTCACGCGATGGTCGCGGACCGTTTCGAACCGGGGTGCAATGTCTTCGAACCGGGTTCAGACGCCTCCCTCTCGGCCGAGCTCAGATACAATTGCTGTTTTCTGTGGGTGGACGTGTCGATGGCGGTGTTGACAGAGTATCTATCGAAGCGAGTCGACGAAATGCTCGACTCGGGAATGTTCGAGGAGTTGGCCGAGTTTTGCGACCCGGATCGCCAGGACAAGCACGACCCGGCAGCGGTTCCGACCGGGCTGAGAAAGGCGATTGGAGTGCCCGAGTTCACTCGGTATTTTAAAAAATACCCACAAAGTAAAAGGGACGAGGACGATGATCGGGAGCGGAGAGGAGCATACGAAGAGGCGGTAAGGGCGATCAAGGACAACACGTGTCAGCTGGCGAAGAGGCAGATAGGGAAGGTCCTACGTTTGAGAGGGGGAGGGTGGGACCTACGGAGACTAGACGCAACGGACGCGTTTAGGGCGGTGGTTGCGACGACATCGTCGGATAGTGACGGCGGAGAGAGGTGGTCAGATATATGGGAGAGACAGGTGGTGGGACCAAGCGTGAAGATTGTGAAGCGCTTCTTGGAGGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005829 GO:0006139 GO:0006396 GO:0006399 GO:0006400 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009058 GO:0009308 GO:0009451 GO:0009536 GO:0009690 GO:0009691 GO:0009824 GO:0009987 GO:0010467 GO:0010817 GO:0016070 GO:0016740 GO:0016765 GO:0018130 GO:0019438 GO:0034264 GO:0034265 GO:0034470 GO:0034641 GO:0034660 GO:0034754 GO:0042445 GO:0042446 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0052381 GO:0052622 GO:0052623 GO:0065007 GO:0065008 GO:0071704 GO:0072521 GO:0072522 GO:0090304 GO:0140098 GO:0140101 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00908 ko01100 ko01110 map00908 map01100 map01110

Pfam Domains

Protein Families

IPPT

Protein Analysis

371

Amino Acids

42.06

Weight (kDa)

8.52

Isoelectric Point (pI)

39.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IPPT	PF01715	105 - 181	1.9e-16	IPP transferase
IPPT	PF01715	199 - 309	2.3e-14	IPP transferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0003924)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G68460
fragaria_vesca	FvH4_3g05590 FvH4_3g17710 FvH4_4g27230
malus_domestica	MD13G1040600.v1.1 MD16G1041700.v1.1
prunus_persica	Prupe.1G312400_v2.0.a1
pyrus_communis	pycom13g03490 pycom16g03610
rosa_chinensis	RchiOBHm_Chr4g0435021 RchiOBHm_Chr5g0029421
rosa_laevigata	RLG00000006628 RLG00000033164
rosa_multiflora	Rmu_sc0000400.1_g000020 Rmu_sc0001211.1_g000003 Rmu_sc0004373.1_g000012 Rmu_sc0007525.1_g000003 Rmu_sc0007525.1_g000009 Rmu_ssc0000309.1_g000055
rosa_roxburghii	Rroxscaffold_5G00362790 Rroxscaffold_5G00376210
rosa_rugosa	Rorug04G0281800 Rorug05G0114100
rosa_samantha	Rh2CG411300 Rh4AG337200 Rh4BG345100 Rh4CG359900 Rh4DG339600 Rh5AG206200 Rh5BG204700 Rh5CG226700 Rh5DG208300
rosa_wichuraiana	Rw4G029400 Rw5G018760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1015
AccB1I	GGYRCC	2 cut(s)	236, 484
AccBSI	CCGCTC	1 cut(s)	856
AccI	GTMKAC	1 cut(s)	672
AccII	CGCG	6 cut(s)	188, 324, 438, 524, 533, 989
AclWI	GGATC	1 cut(s)	735
AcoI	YGGCCR	4 cut(s)	168, 175, 591, 708
AcvI	CACGTG	1 cut(s)	903
AcyI	GRCGYC	2 cut(s)	237, 579
AfeI	AGCGCT	1 cut(s)	1097
AfiI	CCNNNNNNNGG	5 cut(s)	156, 157, 358, 410, 754
AflIII	ACRYGT	4 cut(s)	630, 900, 902, 987
AgsI	TTSAA	2 cut(s)	49, 55
AjiI	CACGTC	2 cut(s)	197, 631
AjnI	CCWGG	1 cut(s)	732
AjuI	GAANNNNNNNTTGG	3 cut(s)	35, 67, 1085
AluBI	AGCT	5 cut(s)	97, 211, 349, 598, 910
AluI	AGCT	5 cut(s)	97, 211, 349, 598, 910
Alw21I	GWGCWC	1 cut(s)	600
Alw26I	GTCTC	3 cut(s)	402, 964, 1054
AlwI	GGATC	1 cut(s)	735
Ama87I	CYCGRG	3 cut(s)	405, 688, 791
Aor51HI	AGCGCT	1 cut(s)	1097
AoxI	GGCC	8 cut(s)	146, 159, 168, 175, 228, 325, 591, 708
ApaI	GGGCCC	1 cut(s)	163
ApeKI	GCWGC	2 cut(s)	94, 752
Asp700I	GAANNNNTTC	1 cut(s)	1097
AspLEI	GCGC	3 cut(s)	239, 440, 1098
AsuC2I	CCSGG	6 cut(s)	359, 549, 570, 725, 749, 766
AsuHPI	GGTGA	2 cut(s)	125, 328
AsuII	TTCGAA	3 cut(s)	288, 543, 564
AvaI	CYCGRG	3 cut(s)	405, 688, 791
AvaII	GGWCC	6 cut(s)	190, 400, 535, 934, 961, 1073
BaeGI	GKGCMC	2 cut(s)	163, 792
BalI	TGGCCA	1 cut(s)	170
BanI	GGYRCC	2 cut(s)	236, 484
BanII	GRGCYC	2 cut(s)	163, 600
BbrPI	CACGTG	1 cut(s)	903
BbsI	GAAGAC	1 cut(s)	553
Bbv12I	GWGCWC	1 cut(s)	600
BbvI	GCAGC	2 cut(s)	106, 764
BccI	CCATC	2 cut(s)	520, 631
BceAI	ACGGC	2 cut(s)	425, 1045
BcgI	CGANNNNNNTGC	4 cut(s)	544, 578, 769, 803
BciT130I	CCWGG	1 cut(s)	734
BcnI	CCSGG	6 cut(s)	359, 549, 570, 725, 749, 766
BcoDI	GTCTC	3 cut(s)	402, 964, 1054
BfaI	CTAG	1 cut(s)	974
BfoI	RGCGCY	2 cut(s)	240, 1099
BglI	GCCNNNNNGGC	1 cut(s)	167
BisI	GCNGC	4 cut(s)	95, 154, 325, 753
BlsI	GCNGC	4 cut(s)	96, 155, 326, 754
Bme1390I	CCNGG	7 cut(s)	359, 549, 570, 725, 734, 749, 766
Bme18I	GGWCC	6 cut(s)	190, 400, 535, 934, 961, 1073
BmeT110I	CYCGRG	3 cut(s)	405, 688, 791
BmgBI	CACGTC	2 cut(s)	197, 631
BmrFI	CCNGG	7 cut(s)	359, 549, 570, 725, 734, 749, 766
BmsI	GCATC	1 cut(s)	480
BpiI	GAAGAC	1 cut(s)	553
Bpu14I	TTCGAA	3 cut(s)	288, 543, 564
BpuMI	CCSGG	6 cut(s)	359, 549, 570, 725, 749, 766
BsaAI	YACGTR	1 cut(s)	903
BsaHI	GRCGYC	2 cut(s)	237, 579
BsaJI	CCNNGG	4 cut(s)	186, 322, 388, 548
Bsc4I	CCNNNNNNNGG	5 cut(s)	156, 157, 358, 410, 754
Bse118I	RCCGGY	3 cut(s)	173, 239, 446
Bse1I	ACTGG	1 cut(s)	238
Bse3DI	GCAATG	1 cut(s)	562
BseBI	CCWGG	1 cut(s)	734
BseDI	CCNNGG	4 cut(s)	186, 322, 388, 548
BseGI	GGATG	2 cut(s)	10, 124
BseLI	CCNNNNNNNGG	5 cut(s)	156, 157, 358, 410, 754
BseMI	GCAATG	1 cut(s)	562
BseMII	CTCAG	2 cut(s)	613, 761
BseNI	ACTGG	1 cut(s)	238
BseRI	GAGGAG	4 cut(s)	203, 377, 716, 876
BseSI	GKGCMC	2 cut(s)	163, 792
BseX3I	CGGCCG	1 cut(s)	591
BseXI	GCAGC	2 cut(s)	106, 764
BseYI	CCCAGC	1 cut(s)	156
Bsh1236I	CGCG	6 cut(s)	188, 324, 438, 524, 533, 989
Bsh1285I	CGRYCG	2 cut(s)	594, 765
BshFI	GGCC	8 cut(s)	148, 161, 170, 177, 230, 327, 593, 710
BshNI	GGYRCC	2 cut(s)	236, 484
BsiEI	CGRYCG	2 cut(s)	594, 765
BsiHKAI	GWGCWC	1 cut(s)	600
BsiHKCI	CYCGRG	3 cut(s)	405, 688, 791
BslFI	GGGAC	5 cut(s)	176, 232, 848, 974, 1086
BslI	CCNNNNNNNGG	5 cut(s)	156, 157, 358, 410, 754
BsmAI	GTCTC	3 cut(s)	402, 964, 1054
BsmBI	CGTCTC	1 cut(s)	402
BsmFI	GGGAC	5 cut(s)	176, 232, 848, 974, 1086
BsnI	GGCC	8 cut(s)	148, 161, 170, 177, 230, 327, 593, 710
BsoBI	CYCGRG	3 cut(s)	405, 688, 791
Bsp119I	TTCGAA	3 cut(s)	288, 543, 564
Bsp120I	GGGCCC	1 cut(s)	159
Bsp1286I	GDGCHC	3 cut(s)	163, 600, 792
Bsp143I	GATC	3 cut(s)	727, 847, 888
BspANI	GGCC	8 cut(s)	148, 161, 170, 177, 230, 327, 593, 710
BspCNI	CTCAG	2 cut(s)	612, 762
BspFNI	CGCG	6 cut(s)	188, 324, 438, 524, 533, 989
BspPI	GGATC	1 cut(s)	735
BspT104I	TTCGAA	3 cut(s)	288, 543, 564
BspT107I	GGYRCC	2 cut(s)	236, 484
BsrBI	CCGCTC	1 cut(s)	856
BsrDI	GCAATG	1 cut(s)	562
BsrFI	RCCGGY	3 cut(s)	173, 239, 446
BsrI	ACTGG	1 cut(s)	238
BssAI	RCCGGY	3 cut(s)	173, 239, 446
BssECI	CCNNGG	4 cut(s)	186, 322, 388, 548
BssMI	GATC	3 cut(s)	727, 847, 888
BssNI	GRCGYC	2 cut(s)	237, 579
Bst2UI	CCWGG	1 cut(s)	734
Bst4CI	ACNGT	2 cut(s)	77, 539
Bst6I	CTCTTC	2 cut(s)	867, 911
BstACI	GRCGYC	2 cut(s)	237, 579
BstBAI	YACGTR	1 cut(s)	903
BstBI	TTCGAA	3 cut(s)	288, 543, 564
BstC8I	GCNNGC	3 cut(s)	241, 426, 912
BstDEI	CTNAG	2 cut(s)	599, 770
BstDSI	CCRYGG	2 cut(s)	186, 322
BstF5I	GGATG	2 cut(s)	10, 124
BstFNI	CGCG	6 cut(s)	188, 324, 438, 524, 533, 989
BstH2I	RGCGCY	2 cut(s)	240, 1099
BstHHI	GCGC	3 cut(s)	239, 440, 1098
BstKTI	GATC	3 cut(s)	730, 850, 891
BstMAI	GTCTC	3 cut(s)	402, 964, 1054
BstMBI	GATC	3 cut(s)	727, 847, 888
BstMCI	CGRYCG	2 cut(s)	594, 765
BstMWI	GCNNNNNNNGC	9 cut(s)	94, 167, 236, 249, 530, 884, 986, 995, 1004
BstNI	CCWGG	1 cut(s)	734
BstSCI	CCNGG	7 cut(s)	357, 547, 568, 723, 732, 747, 764
BstSLI	GKGCMC	2 cut(s)	163, 792
BstUI	CGCG	6 cut(s)	188, 324, 438, 524, 533, 989
BstV1I	GCAGC	2 cut(s)	106, 764
BstV2I	GAAGAC	1 cut(s)	553
BstZI	CGGCCG	1 cut(s)	591
BsuRI	GGCC	8 cut(s)	148, 161, 170, 177, 230, 327, 593, 710
BtgI	CCRYGG	2 cut(s)	186, 322
BtgZI	GCGATG	1 cut(s)	539
BtrI	CACGTC	2 cut(s)	197, 631
BtsCI	GGATG	2 cut(s)	10, 124
BtsIMutI	CAGTG	1 cut(s)	231
Cac8I	GCNNGC	3 cut(s)	241, 426, 912
CfoI	GCGC	3 cut(s)	239, 440, 1098
Cfr10I	RCCGGY	3 cut(s)	173, 239, 446
Cfr42I	CCGCGG	2 cut(s)	189, 325
CpoI	CGGWCCG	1 cut(s)	535
CseI	GACGC	3 cut(s)	587, 986, 995
CspI	CGGWCCG	1 cut(s)	535
CviAII	CATG	2 cut(s)	166, 223
DdeI	CTNAG	2 cut(s)	599, 770
DinI	GGCGCC	1 cut(s)	238
DpnI	GATC	3 cut(s)	729, 849, 890
DpnII	GATC	3 cut(s)	727, 847, 888
DraI	TTTAAA	1 cut(s)	811
DrdI	GACNNNNNNGTC	1 cut(s)	1015
DseDI	GACNNNNNNGTC	1 cut(s)	1015
EaeI	YGGCCR	4 cut(s)	168, 175, 591, 708
EagI	CGGCCG	1 cut(s)	591
Eam1104I	CTCTTC	2 cut(s)	867, 911
EarI	CTCTTC	2 cut(s)	867, 911
EciI	GGCGGA	1 cut(s)	1047
Ecl136II	GAGCTC	1 cut(s)	598
EclXI	CGGCCG	1 cut(s)	591
Eco24I	GRGCYC	2 cut(s)	163, 600
Eco47I	GGWCC	6 cut(s)	190, 400, 535, 934, 961, 1073
Eco47III	AGCGCT	1 cut(s)	1097
Eco52I	CGGCCG	1 cut(s)	591
Eco53kI	GAGCTC	1 cut(s)	598
Eco72I	CACGTG	1 cut(s)	903
Eco88I	CYCGRG	3 cut(s)	405, 688, 791
EcoICRI	GAGCTC	1 cut(s)	598
EcoO109I	RGGNCCY	3 cut(s)	147, 934, 961
EcoRII	CCWGG	1 cut(s)	732
EcoT38I	GRGCYC	2 cut(s)	163, 600
EgeI	GGCGCC	1 cut(s)	238
EheI	GGCGCC	1 cut(s)	238
Esp3I	CGTCTC	1 cut(s)	402
FaeI	CATG	2 cut(s)	169, 226
FaiI	YATR	6 cut(s)	66, 167, 224, 868, 1052, 1054
FalI	AAGNNNNNCTT	1 cut(s)	1085
FaqI	GGGAC	5 cut(s)	176, 232, 848, 974, 1086
FatI	CATG	2 cut(s)	165, 222
FauI	CCCGC	6 cut(s)	99, 158, 257, 281, 433, 494
FblI	GTMKAC	1 cut(s)	672
Fnu4HI	GCNGC	4 cut(s)	95, 154, 325, 753
FokI	GGATG	1 cut(s)	111
FriOI	GRGCYC	2 cut(s)	163, 600
Fsp4HI	GCNGC	4 cut(s)	95, 154, 325, 753
FspBI	CTAG	1 cut(s)	974
GlaI	GCGC	3 cut(s)	238, 439, 1097
GluI	GCNGC	4 cut(s)	95, 154, 325, 753
GsaI	CCCAGC	1 cut(s)	160
HaeII	RGCGCY	2 cut(s)	240, 1099
HaeIII	GGCC	8 cut(s)	148, 161, 170, 177, 230, 327, 593, 710
HgaI	GACGC	3 cut(s)	587, 986, 995
HhaI	GCGC	3 cut(s)	239, 440, 1098
Hin1I	GRCGYC	2 cut(s)	237, 579
Hin1II	CATG	2 cut(s)	169, 226
Hin6I	GCGC	3 cut(s)	237, 438, 1096
HinP1I	GCGC	3 cut(s)	237, 438, 1096
HincII	GTYRAC	2 cut(s)	648, 673
HindII	GTYRAC	2 cut(s)	648, 673
HinfI	GANTC	4 cut(s)	366, 472, 669, 686
HphI	GGTGA	2 cut(s)	125, 328
Hpy166II	GTNNAC	4 cut(s)	628, 648, 673, 798
Hpy188I	TCNGA	7 cut(s)	304, 477, 577, 602, 762, 1021, 1048
Hpy188III	TCNNGA	2 cut(s)	690, 851
Hpy8I	GTNNAC	4 cut(s)	628, 648, 673, 798
Hpy99I	CGWCG	6 cut(s)	201, 446, 500, 677, 1012, 1021
HpyAV	CCTTC	5 cut(s)	25, 292, 475, 523, 925
HpyCH4III	ACNGT	2 cut(s)	77, 539
HpyCH4IV	ACGT	4 cut(s)	196, 630, 902, 940
HpyCH4V	TGCA	1 cut(s)	555
HpyF10VI	GCNNNNNNNGC	9 cut(s)	94, 167, 236, 249, 530, 884, 986, 995, 1004
HpyF3I	CTNAG	2 cut(s)	599, 770
HpySE526I	ACGT	4 cut(s)	196, 630, 902, 940
Hsp92I	GRCGYC	2 cut(s)	237, 579
Hsp92II	CATG	2 cut(s)	169, 226
HspAI	GCGC	3 cut(s)	237, 438, 1096
KasI	GGCGCC	1 cut(s)	236
KroI	GCCGGC	1 cut(s)	239
KroNI	GCCGGC	1 cut(s)	241
KspI	CCGCGG	2 cut(s)	189, 325
Kzo9I	GATC	3 cut(s)	727, 847, 888
LmnI	GCTCC	6 cut(s)	93, 102, 216, 354, 853, 863
Lsp1109I	GCAGC	2 cut(s)	106, 764
LweI	GCATC	1 cut(s)	480
MaeI	CTAG	1 cut(s)	974
MaeII	ACGT	4 cut(s)	196, 630, 902, 940
MaeIII	GTNAC	1 cut(s)	1025
MalI	GATC	3 cut(s)	729, 849, 890
MbiI	CCGCTC	1 cut(s)	856
MboI	GATC	3 cut(s)	727, 847, 888
MboII	GAAGA	5 cut(s)	277, 553, 884, 928, 1096
MfeI	CAATTG	1 cut(s)	607
MhlI	GDGCHC	3 cut(s)	163, 600, 792
MlsI	TGGCCA	1 cut(s)	170
MluCI	AATT	4 cut(s)	43, 49, 61, 607
MluI	ACGCGT	1 cut(s)	987
MluNI	TGGCCA	1 cut(s)	170
Mly113I	GGCGCC	1 cut(s)	237
MlyI	GAGTC	3 cut(s)	360, 678, 680
MmeI	TCCRAC	4 cut(s)	327, 378, 785, 999
Mox20I	TGGCCA	1 cut(s)	170
MroNI	GCCGGC	1 cut(s)	239
MroXI	GAANNNNTTC	1 cut(s)	1097
MscI	TGGCCA	1 cut(s)	170
MseI	TTAA	1 cut(s)	810
Msp20I	TGGCCA	1 cut(s)	170
MspA1I	CMGCKG	5 cut(s)	156, 188, 324, 755, 910
MspR9I	CCNGG	7 cut(s)	359, 549, 570, 725, 734, 749, 766
MunI	CAATTG	1 cut(s)	607
MvaI	CCWGG	1 cut(s)	734
MvnI	CGCG	6 cut(s)	188, 324, 438, 524, 533, 989
MwoI	GCNNNNNNNGC	9 cut(s)	94, 167, 236, 249, 530, 884, 986, 995, 1004
NaeI	GCCGGC	1 cut(s)	241
NarI	GGCGCC	1 cut(s)	237
NciI	CCSGG	6 cut(s)	359, 549, 570, 725, 749, 766
NdeII	GATC	3 cut(s)	727, 847, 888
NgoMIV	GCCGGC	1 cut(s)	239
NlaIII	CATG	2 cut(s)	169, 226
NmeAIII	GCCGAG	5 cut(s)	348, 369, 569, 619, 736
NmuCI	GTSAC	1 cut(s)	1025
NspV	TTCGAA	3 cut(s)	288, 543, 564
PcsI	WCGNNNNNNNCGW	1 cut(s)	681
PdiI	GCCGGC	1 cut(s)	241
PdmI	GAANNNNTTC	1 cut(s)	1097
PfeI	GAWTC	1 cut(s)	472
PflFI	GACNNNGTC	1 cut(s)	1015
PfoI	TCCNGGA	1 cut(s)	357
PkrI	GCNGC	4 cut(s)	96, 155, 326, 754
PleI	GAGTC	3 cut(s)	360, 677, 680
PluTI	GGCGCC	1 cut(s)	240
PmaCI	CACGTG	1 cut(s)	903
PmlI	CACGTG	1 cut(s)	903
PpsI	GAGTC	3 cut(s)	360, 677, 680
Ppu21I	YACGTR	1 cut(s)	903
PpuMI	RGGWCCY	2 cut(s)	934, 961
Psp124BI	GAGCTC	1 cut(s)	600
Psp5II	RGGWCCY	2 cut(s)	934, 961
Psp6I	CCWGG	1 cut(s)	732
PspCI	CACGTG	1 cut(s)	903
PspFI	CCCAGC	1 cut(s)	156
PspGI	CCWGG	1 cut(s)	732
PspOMI	GGGCCC	1 cut(s)	159
PspPPI	RGGWCCY	2 cut(s)	934, 961
PsyI	GACNNNGTC	1 cut(s)	1015
PvuII	CAGCTG	1 cut(s)	910
Rsr2I	CGGWCCG	1 cut(s)	535
RsrII	CGGWCCG	1 cut(s)	535
SacI	GAGCTC	1 cut(s)	600
SacII	CCGCGG	2 cut(s)	189, 325
SalI	GTCGAC	1 cut(s)	671
SaqAI	TTAA	1 cut(s)	810
SatI	GCNGC	4 cut(s)	95, 154, 325, 753
Sau3AI	GATC	3 cut(s)	727, 847, 888
SchI	GAGTC	3 cut(s)	360, 678, 680
ScrFI	CCNGG	7 cut(s)	359, 549, 570, 725, 734, 749, 766
SduI	GDGCHC	3 cut(s)	163, 600, 792
SfaNI	GCATC	1 cut(s)	480
SfiI	GGCCNNNNNGGCC	1 cut(s)	167
SfoI	GGCGCC	1 cut(s)	238
Sfr303I	CCGCGG	2 cut(s)	189, 325
SfuI	TTCGAA	3 cut(s)	288, 543, 564
SgrBI	CCGCGG	2 cut(s)	189, 325
SinI	GGWCC	6 cut(s)	190, 400, 535, 934, 961, 1073
Sse9I	AATT	4 cut(s)	43, 49, 61, 607
SspDI	GGCGCC	1 cut(s)	236
SspMI	CTAG	1 cut(s)	974
SstI	GAGCTC	1 cut(s)	600
StyD4I	CCNGG	7 cut(s)	357, 547, 568, 723, 732, 747, 764
TaaI	ACNGT	2 cut(s)	77, 539
TaiI	ACGT	4 cut(s)	199, 633, 905, 943
TasI	AATT	4 cut(s)	43, 49, 61, 607
TauI	GCSGC	2 cut(s)	156, 327
TfiI	GAWTC	1 cut(s)	472
Tru1I	TTAA	1 cut(s)	810
Tru9I	TTAA	1 cut(s)	810
TscAI	CASTG	1 cut(s)	238
TseFI	GTSAC	1 cut(s)	1025
TseI	GCWGC	2 cut(s)	94, 752
Tsp45I	GTSAC	1 cut(s)	1025
TspDTI	ATGAA	1 cut(s)	505
TspGWI	ACGGA	3 cut(s)	426, 982, 998
TspRI	CASTG	1 cut(s)	238
Tth111I	GACNNNGTC	1 cut(s)	1015
VpaK11BI	GGWCC	6 cut(s)	190, 400, 535, 934, 961, 1073
XmiI	GTMKAC	1 cut(s)	672
XmnI	GAANNNNTTC	1 cut(s)	1097
XspI	CTAG	1 cut(s)	974

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.