Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0003924

Physical Location & Seq

Genomic Coordinates Forward (+)

9159733 .. 9161157

Gene Structure 1425 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000006628

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1425 bp

ATGAACAAATTGCTGCATGAGTGCGAGGTGGGAAAAAACCTCAGAGGTTATAAGCCAGGCCAGAAACAAACAAACCATCACACAACGTCATCGCAATGCCGGAATCAGTTCATTCCCTCGTCCTCTTCACCGCCAACCTGTTTGGTTCGTACGACTGATCAGTGTACGTACGTCGATCAAGATTCAGGAACAGAGAGAAAAAGAGCGGACAGAGCAGGACTCACACAACAGACACAGCTGAAATTAACCACACGTACTCGCCACTCTCCTCTCTTTATTTTGATTCCGTATTCGCTTGGTGTGGAGTGTCCGTATTCTATGACACTTGATCCCTTCTCAACAGTCTCAACTCACCAATATTATAATATTACCACATTCAAACATTTCCGCTCCTCGCCGCCGGTCAACCTCACTCCCCCACCATCTCTCCCCCACAAGCCGCGCTGGGCCCGAATGGACTCCGGCCCAGCATCCAGCCCACAACAACATCACCACAAGCTCCGCAAGGACAAGGTCATCGTCATTATGGGAGCCACCGGCGCCGGCAAGTCCCGTCTCTCCATCGACCTCGCCACTCACTTCATTTCTTGCTTCGAAATCATCAACTCCGACAAGATGCAAGTCTACAAGGGTCTCGACATCACCACCAACAAGATTCCTGTCCCCGACCGCCTCGGGGTCCCTCACCATCTCCTCGGCGAGTTAGACCCGCTCGATGGCGAGGTCTCCCCCGCCGAGTTTCGACAACTTGCAGGTCGAGCCGTTTCCAGCATTACTTGTAGAGGTAAAGTGCCTATGCTCGTGGGTGGGTCCAACTCTCTTATTCACACGCTCCTCGTAGACCGGTTCGAACCGGGTGTCAATAATGTGTTCGAAAACGGCGCCGAGTTAGTGTCATCGGAGCTCAGGTACGATTGCTGCTTTCTCTGGGTTGATGTGTCATTTGTGGTTTTGGCCGACTACTTATCGAAGCGAGTGGACGAAATGCTCGAGTCGGGAATGTTTGAGGAGTTGGCCGAGTTTTGCGAGGCGGAGGAGGAGGTCGACTCGGCGGTTCGAACCGGGTTGAGAAAGGCTATTGGAGTGCCCGAGTTCAGCCAGTTTTTTAAAAAGTACCCGCCGGGAAGAAGTCAGTGTCGGAGTGCCGGGCCCCAGGATCCGCTGCGGAGGGGAGCAGCATACAACGATGCGGTGAGGGCCATCAAGGACAACACGTGTCAGTTGGCCAAGAAGCAGATCGGAAAGATTTTACGGCTGAAGGGGGCAGGCGGGTGGGAGCTACGGAGGCTAGACGCGACGGAGGCGTTTAGGGCGGTGGTGACGTCAGATAACGACGATGTCGGAAGGAGGTGGTCGGAGATATGGGAGGAACAGGTGGTGGAACCAAGCGTGAAAATTGTGAAGCGATTCTTGGAGCAGGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005829 GO:0006139 GO:0006396 GO:0006399 GO:0006400 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009058 GO:0009308 GO:0009451 GO:0009536 GO:0009690 GO:0009691 GO:0009824 GO:0009987 GO:0010467 GO:0010817 GO:0016070 GO:0016740 GO:0016765 GO:0018130 GO:0019438 GO:0034264 GO:0034265 GO:0034470 GO:0034641 GO:0034660 GO:0034754 GO:0042445 GO:0042446 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0052381 GO:0052622 GO:0052623 GO:0065007 GO:0065008 GO:0071704 GO:0072521 GO:0072522 GO:0090304 GO:0140098 GO:0140101 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00908 ko01100 ko01110 map00908 map01100 map01110

Pfam Domains

Protein Families

IPPT

Protein Analysis

475

Amino Acids

53.13

Weight (kDa)

8.5

Isoelectric Point (pI)

49.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IPPT	PF01715	207 - 281	1e-15	IPP transferase
IPPT	PF01715	301 - 413	5e-11	IPP transferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0003924)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G68460
fragaria_vesca	FvH4_3g05590 FvH4_3g17710 FvH4_4g27230
malus_domestica	MD13G1040600.v1.1 MD16G1041700.v1.1
prunus_persica	Prupe.1G312400_v2.0.a1
pyrus_communis	pycom13g03490 pycom16g03610
rosa_chinensis	RchiOBHm_Chr4g0435021 RchiOBHm_Chr5g0029421
rosa_laevigata	RLG00000006628 RLG00000033164
rosa_multiflora	Rmu_sc0000400.1_g000020 Rmu_sc0001211.1_g000003 Rmu_sc0004373.1_g000012 Rmu_sc0007525.1_g000003 Rmu_sc0007525.1_g000009 Rmu_ssc0000309.1_g000055
rosa_roxburghii	Rroxscaffold_5G00362790 Rroxscaffold_5G00376210
rosa_rugosa	Rorug04G0281800 Rorug05G0114100
rosa_samantha	Rh2CG411300 Rh4AG337200 Rh4BG345100 Rh4CG359900 Rh4DG339600 Rh5AG206200 Rh5BG204700 Rh5CG226700 Rh5DG208300
rosa_wichuraiana	Rw4G029400 Rw5G018760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	51, 363
AatII	GACGTC	1 cut(s)	1325
Acc36I	ACCTGC	1 cut(s)	743
AccB1I	GGYRCC	2 cut(s)	539, 881
AccBSI	CCGCTC	3 cut(s)	206, 390, 712
AccI	GTMKAC	3 cut(s)	624, 840, 1044
AccII	CGCG	2 cut(s)	442, 1295
AclWI	GGATC	3 cut(s)	323, 1151, 1164
AcoI	YGGCCR	3 cut(s)	954, 1014, 1224
AcuI	CTGAAG	1 cut(s)	1277
AcvI	CACGTG	1 cut(s)	1215
AcyI	GRCGYC	3 cut(s)	540, 882, 1322
AfaI	GTAC	6 cut(s)	151, 166, 170, 256, 911, 1115
AfiI	CCNNNNNNNGG	2 cut(s)	676, 716
AflIII	ACRYGT	3 cut(s)	251, 1212, 1214
AgeI	ACCGGT	1 cut(s)	843
AgsI	TTSAA	1 cut(s)	379
AjnI	CCWGG	2 cut(s)	55, 1152
AjuI	GAANNNNNNNTTGG	1 cut(s)	1394
AluBI	AGCT	4 cut(s)	238, 499, 904, 1279
AluI	AGCT	4 cut(s)	238, 499, 904, 1279
Alw21I	GWGCWC	1 cut(s)	906
Alw26I	GTCTC	4 cut(s)	349, 560, 638, 730
AlwI	GGATC	3 cut(s)	323, 1151, 1164
Ama87I	CYCGRG	3 cut(s)	674, 989, 1088
AoxI	GGCC	8 cut(s)	58, 447, 463, 954, 1014, 1148, 1197, 1224
ApaI	GGGCCC	2 cut(s)	451, 1152
ApeKI	GCWGC	4 cut(s)	13, 918, 1162, 1175
ArsI	GACNNNNNNTTYG	2 cut(s)	843, 875
AsiGI	ACCGGT	1 cut(s)	843
Asp700I	GAANNNNTTC	2 cut(s)	107, 1406
AspLEI	GCGC	3 cut(s)	444, 542, 884
AspS9I	GGNCC	8 cut(s)	447, 448, 464, 679, 810, 1148, 1149, 1197
AsuC2I	CCSGG	4 cut(s)	855, 1063, 1122, 1147
AsuHPI	GGTGA	7 cut(s)	120, 344, 482, 634, 677, 1204, 1330
AsuII	TTCGAA	4 cut(s)	594, 849, 873, 1057
AvaI	CYCGRG	3 cut(s)	674, 989, 1088
AvaII	GGWCC	2 cut(s)	679, 810
BaeGI	GKGCMC	3 cut(s)	451, 1089, 1152
BalI	TGGCCA	1 cut(s)	1226
BamHI	GGATCC	1 cut(s)	1156
BanI	GGYRCC	2 cut(s)	539, 881
BanII	GRGCYC	3 cut(s)	451, 906, 1152
BauI	CACGAG	1 cut(s)	800
BbrPI	CACGTG	1 cut(s)	1215
Bbv12I	GWGCWC	1 cut(s)	906
BbvI	GCAGC	3 cut(s)	905, 1149, 1187
BccI	CCATC	6 cut(s)	84, 430, 569, 696, 710, 1208
BceAI	ACGGC	3 cut(s)	746, 895, 1268
BciT130I	CCWGG	2 cut(s)	57, 1154
BclI	TGATCA	1 cut(s)	157
BcnI	CCSGG	4 cut(s)	855, 1063, 1122, 1147
BcoDI	GTCTC	4 cut(s)	349, 560, 638, 730
BfaI	CTAG	1 cut(s)	1289
BfoI	RGCGCY	2 cut(s)	543, 885
BfuAI	ACCTGC	1 cut(s)	743
BisI	GCNGC	6 cut(s)	14, 398, 440, 919, 1163, 1176
BlsI	GCNGC	6 cut(s)	15, 399, 441, 920, 1164, 1177
Bme1390I	CCNGG	6 cut(s)	57, 855, 1063, 1122, 1147, 1154
Bme18I	GGWCC	2 cut(s)	679, 810
BmeT110I	CYCGRG	3 cut(s)	674, 989, 1088
BmgT120I	GGNCC	8 cut(s)	447, 448, 464, 679, 810, 1148, 1149, 1197
BmrFI	CCNGG	6 cut(s)	57, 855, 1063, 1122, 1147, 1154
BmsI	GCATC	3 cut(s)	479, 606, 1177
BplI	GAGNNNNNCTC	4 cut(s)	204, 236, 1031, 1063
Bpu10I	CCTNAGC	1 cut(s)	905
Bpu14I	TTCGAA	4 cut(s)	594, 849, 873, 1057
BpuMI	CCSGG	4 cut(s)	855, 1063, 1122, 1147
BsaAI	YACGTR	3 cut(s)	168, 254, 1215
BsaHI	GRCGYC	3 cut(s)	540, 882, 1322
BsaI	GGTCTC	2 cut(s)	638, 730
BsaJI	CCNNGG	3 cut(s)	673, 694, 1152
BsaWI	WCCGGW	1 cut(s)	843
BsaXI	ACNNNNNCTCC	7 cut(s)	296, 326, 411, 441, 893, 923, 1406
Bsc4I	CCNNNNNNNGG	2 cut(s)	676, 716
Bse118I	RCCGGY	4 cut(s)	400, 536, 542, 843
Bse1I	ACTGG	1 cut(s)	1099
Bse3DI	GCAATG	1 cut(s)	101
BseBI	CCWGG	2 cut(s)	57, 1154
BseDI	CCNNGG	3 cut(s)	673, 694, 1152
BseGI	GGATG	1 cut(s)	470
BseLI	CCNNNNNNNGG	2 cut(s)	676, 716
BseMI	GCAATG	1 cut(s)	101
BseMII	CTCAG	2 cut(s)	55, 919
BseNI	ACTGG	1 cut(s)	1099
BseRI	GAGGAG	7 cut(s)	258, 382, 683, 824, 1022, 1049, 1052
BseSI	GKGCMC	3 cut(s)	451, 1089, 1152
BseXI	GCAGC	3 cut(s)	905, 1149, 1187
BseYI	CCCAGC	2 cut(s)	444, 466
Bsh1236I	CGCG	2 cut(s)	442, 1295
Bsh1285I	CGRYCG	1 cut(s)	670
BshFI	GGCC	8 cut(s)	60, 449, 465, 956, 1016, 1150, 1199, 1226
BshNI	GGYRCC	2 cut(s)	539, 881
BshTI	ACCGGT	1 cut(s)	843
BsiEI	CGRYCG	1 cut(s)	670
BsiHKAI	GWGCWC	1 cut(s)	906
BsiHKCI	CYCGRG	3 cut(s)	674, 989, 1088
BsiWI	CGTACG	2 cut(s)	149, 168
BslFI	GGGAC	3 cut(s)	535, 647, 665
BslI	CCNNNNNNNGG	2 cut(s)	676, 716
BsmAI	GTCTC	4 cut(s)	349, 560, 638, 730
BsmBI	CGTCTC	1 cut(s)	560
BsmFI	GGGAC	3 cut(s)	535, 647, 665
BsnI	GGCC	8 cut(s)	60, 449, 465, 956, 1016, 1150, 1199, 1226
Bso31I	GGTCTC	2 cut(s)	638, 730
BsoBI	CYCGRG	3 cut(s)	674, 989, 1088
Bsp119I	TTCGAA	4 cut(s)	594, 849, 873, 1057
Bsp120I	GGGCCC	2 cut(s)	447, 1148
Bsp1286I	GDGCHC	4 cut(s)	451, 906, 1089, 1152
Bsp143I	GATC	5 cut(s)	157, 175, 328, 1156, 1236
BspANI	GGCC	8 cut(s)	60, 449, 465, 956, 1016, 1150, 1199, 1226
BspCNI	CTCAG	2 cut(s)	54, 918
BspFNI	CGCG	2 cut(s)	442, 1295
BspMI	ACCTGC	1 cut(s)	743
BspPI	GGATC	3 cut(s)	323, 1151, 1164
BspT104I	TTCGAA	4 cut(s)	594, 849, 873, 1057
BspT107I	GGYRCC	2 cut(s)	539, 881
BspTNI	GGTCTC	2 cut(s)	638, 730
BsrBI	CCGCTC	3 cut(s)	206, 390, 712
BsrDI	GCAATG	1 cut(s)	101
BsrFI	RCCGGY	4 cut(s)	400, 536, 542, 843
BsrI	ACTGG	1 cut(s)	1099
BssAI	RCCGGY	4 cut(s)	400, 536, 542, 843
BssECI	CCNNGG	3 cut(s)	673, 694, 1152
BssMI	GATC	5 cut(s)	157, 175, 328, 1156, 1236
BssNI	GRCGYC	3 cut(s)	540, 882, 1322
BssSI	CACGAG	1 cut(s)	800
Bst2BI	CACGAG	1 cut(s)	800
Bst2UI	CCWGG	2 cut(s)	57, 1154
Bst4CI	ACNGT	1 cut(s)	343
Bst6I	CTCTTC	1 cut(s)	130
BstACI	GRCGYC	3 cut(s)	540, 882, 1322
BstBAI	YACGTR	3 cut(s)	168, 254, 1215
BstBI	TTCGAA	4 cut(s)	594, 849, 873, 1057
BstC8I	GCNNGC	2 cut(s)	544, 1267
BstDEI	CTNAG	2 cut(s)	41, 905
BstF5I	GGATG	1 cut(s)	470
BstFNI	CGCG	2 cut(s)	442, 1295
BstH2I	RGCGCY	2 cut(s)	543, 885
BstHHI	GCGC	3 cut(s)	444, 542, 884
BstKTI	GATC	5 cut(s)	160, 178, 331, 1159, 1239
BstMAI	GTCTC	4 cut(s)	349, 560, 638, 730
BstMBI	GATC	5 cut(s)	157, 175, 328, 1156, 1236
BstMCI	CGRYCG	1 cut(s)	670
BstMWI	GCNNNNNNNGC	7 cut(s)	212, 539, 758, 1196, 1285, 1301, 1310
BstNI	CCWGG	2 cut(s)	57, 1154
BstSCI	CCNGG	6 cut(s)	55, 853, 1061, 1120, 1145, 1152
BstSLI	GKGCMC	3 cut(s)	451, 1089, 1152
BstSNI	TACGTA	1 cut(s)	168
BstUI	CGCG	2 cut(s)	442, 1295
BstV1I	GCAGC	3 cut(s)	905, 1149, 1187
BstX2I	RGATCY	1 cut(s)	1156
BstYI	RGATCY	1 cut(s)	1156
BsuRI	GGCC	8 cut(s)	60, 449, 465, 956, 1016, 1150, 1199, 1226
BtgZI	GCGATG	1 cut(s)	75
BtsCI	GGATG	1 cut(s)	470
BtsIMutI	CAGTG	2 cut(s)	167, 1139
BveI	ACCTGC	1 cut(s)	743
Cac8I	GCNNGC	2 cut(s)	544, 1267
CfoI	GCGC	3 cut(s)	444, 542, 884
Cfr10I	RCCGGY	4 cut(s)	400, 536, 542, 843
Cfr13I	GGNCC	8 cut(s)	447, 448, 464, 679, 810, 1148, 1149, 1197
CseI	GACGC	1 cut(s)	1301
Csp6I	GTAC	6 cut(s)	150, 165, 169, 255, 910, 1114
CspAI	ACCGGT	1 cut(s)	843
CviAII	CATG	1 cut(s)	17
CviQI	GTAC	6 cut(s)	150, 165, 169, 255, 910, 1114
DdeI	CTNAG	2 cut(s)	41, 905
DinI	GGCGCC	2 cut(s)	541, 883
DpnI	GATC	5 cut(s)	159, 177, 330, 1158, 1238
DpnII	GATC	5 cut(s)	157, 175, 328, 1156, 1236
DraI	TTTAAA	1 cut(s)	1108
EaeI	YGGCCR	3 cut(s)	954, 1014, 1224
Eam1104I	CTCTTC	1 cut(s)	130
EarI	CTCTTC	1 cut(s)	130
EciI	GGCGGA	1 cut(s)	1046
Ecl136II	GAGCTC	1 cut(s)	904
Eco105I	TACGTA	1 cut(s)	168
Eco24I	GRGCYC	3 cut(s)	451, 906, 1152
Eco31I	GGTCTC	2 cut(s)	638, 730
Eco47I	GGWCC	2 cut(s)	679, 810
Eco53kI	GAGCTC	1 cut(s)	904
Eco57I	CTGAAG	1 cut(s)	1277
Eco72I	CACGTG	1 cut(s)	1215
Eco88I	CYCGRG	3 cut(s)	674, 989, 1088
EcoICRI	GAGCTC	1 cut(s)	904
EcoO109I	RGGNCCY	2 cut(s)	679, 1149
EcoRII	CCWGG	2 cut(s)	55, 1152
EcoT38I	GRGCYC	3 cut(s)	451, 906, 1152
EgeI	GGCGCC	2 cut(s)	541, 883
EheI	GGCGCC	2 cut(s)	541, 883
Esp3I	CGTCTC	1 cut(s)	560
FaeI	CATG	1 cut(s)	20
FaiI	YATR	8 cut(s)	18, 51, 320, 363, 527, 797, 1180, 1363
FalI	AAGNNNNNCTT	1 cut(s)	1394
FaqI	GGGAC	3 cut(s)	535, 647, 665
FatI	CATG	1 cut(s)	16
FauI	CCCGC	4 cut(s)	717, 739, 1125, 1262
FbaI	TGATCA	1 cut(s)	157
FblI	GTMKAC	3 cut(s)	624, 840, 1044
Fnu4HI	GCNGC	6 cut(s)	14, 398, 440, 919, 1163, 1176
FokI	GGATG	1 cut(s)	457
FriOI	GRGCYC	3 cut(s)	451, 906, 1152
Fsp4HI	GCNGC	6 cut(s)	14, 398, 440, 919, 1163, 1176
FspBI	CTAG	1 cut(s)	1289
GlaI	GCGC	3 cut(s)	443, 541, 883
GluI	GCNGC	6 cut(s)	14, 398, 440, 919, 1163, 1176
GsaI	CCCAGC	2 cut(s)	448, 470
HaeII	RGCGCY	2 cut(s)	543, 885
HaeIII	GGCC	8 cut(s)	60, 449, 465, 956, 1016, 1150, 1199, 1226
HgaI	GACGC	1 cut(s)	1301
HhaI	GCGC	3 cut(s)	444, 542, 884
Hin1I	GRCGYC	3 cut(s)	540, 882, 1322
Hin1II	CATG	1 cut(s)	20
Hin6I	GCGC	3 cut(s)	442, 540, 882
HinP1I	GCGC	3 cut(s)	442, 540, 882
HincII	GTYRAC	2 cut(s)	406, 1045
HindII	GTYRAC	2 cut(s)	406, 1045
HinfI	GANTC	9 cut(s)	103, 182, 219, 283, 458, 655, 992, 1046, 1407
HphI	GGTGA	7 cut(s)	120, 344, 482, 634, 677, 1204, 1330
Hpy166II	GTNNAC	6 cut(s)	165, 406, 625, 841, 979, 1045
Hpy188I	TCNGA	8 cut(s)	44, 610, 901, 1140, 1241, 1327, 1343, 1357
Hpy188III	TCNNGA	4 cut(s)	179, 186, 635, 996
Hpy8I	GTNNAC	6 cut(s)	165, 406, 625, 841, 979, 1045
Hpy99I	CGWCG	3 cut(s)	176, 1300, 1337
HpyAV	CCTTC	3 cut(s)	343, 1252, 1338
HpyCH4III	ACNGT	1 cut(s)	343
HpyCH4IV	ACGT	6 cut(s)	86, 167, 171, 253, 1214, 1322
HpyCH4V	TGCA	3 cut(s)	16, 619, 752
HpyF10VI	GCNNNNNNNGC	7 cut(s)	212, 539, 758, 1196, 1285, 1301, 1310
HpyF3I	CTNAG	2 cut(s)	41, 905
HpySE526I	ACGT	6 cut(s)	86, 167, 171, 253, 1214, 1322
Hsp92I	GRCGYC	3 cut(s)	540, 882, 1322
Hsp92II	CATG	1 cut(s)	20
HspAI	GCGC	3 cut(s)	442, 540, 882
KasI	GGCGCC	2 cut(s)	539, 881
KflI	GGGWCCC	1 cut(s)	679
KroI	GCCGGC	1 cut(s)	542
KroNI	GCCGGC	1 cut(s)	544
Ksp22I	TGATCA	1 cut(s)	157
Kzo9I	GATC	5 cut(s)	157, 175, 328, 1156, 1236
LmnI	GCTCC	8 cut(s)	395, 504, 530, 837, 901, 1172, 1276, 1414
Lsp1109I	GCAGC	3 cut(s)	905, 1149, 1187
LweI	GCATC	3 cut(s)	479, 606, 1177
MaeI	CTAG	1 cut(s)	1289
MaeII	ACGT	6 cut(s)	86, 167, 171, 253, 1214, 1322
MaeIII	GTNAC	1 cut(s)	1318
MalI	GATC	5 cut(s)	159, 177, 330, 1158, 1238
MbiI	CCGCTC	3 cut(s)	206, 390, 712
MboI	GATC	5 cut(s)	157, 175, 328, 1156, 1236
MboII	GAAGA	2 cut(s)	117, 1137
MflI	RGATCY	1 cut(s)	1156
MhlI	GDGCHC	4 cut(s)	451, 906, 1089, 1152
MlsI	TGGCCA	1 cut(s)	1226
MluCI	AATT	3 cut(s)	8, 242, 1395
MluNI	TGGCCA	1 cut(s)	1226
Mly113I	GGCGCC	2 cut(s)	540, 882
MlyI	GAGTC	4 cut(s)	213, 452, 1001, 1040
MmeI	TCCRAC	5 cut(s)	633, 837, 1118, 1321, 1335
Mox20I	TGGCCA	1 cut(s)	1226
MroNI	GCCGGC	1 cut(s)	542
MroXI	GAANNNNTTC	2 cut(s)	107, 1406
MscI	TGGCCA	1 cut(s)	1226
MseI	TTAA	2 cut(s)	245, 1107
MslI	CAYNNNNRTG	1 cut(s)	94
Msp20I	TGGCCA	1 cut(s)	1226
MspA1I	CMGCKG	2 cut(s)	238, 1162
MspR9I	CCNGG	6 cut(s)	57, 855, 1063, 1122, 1147, 1154
MvaI	CCWGG	2 cut(s)	57, 1154
MvnI	CGCG	2 cut(s)	442, 1295
MwoI	GCNNNNNNNGC	7 cut(s)	212, 539, 758, 1196, 1285, 1301, 1310
NaeI	GCCGGC	1 cut(s)	544
NarI	GGCGCC	2 cut(s)	540, 882
NciI	CCSGG	4 cut(s)	855, 1063, 1122, 1147
NdeII	GATC	5 cut(s)	157, 175, 328, 1156, 1236
NgoMIV	GCCGGC	1 cut(s)	542
NlaIII	CATG	1 cut(s)	20
NmeAIII	GCCGAG	5 cut(s)	675, 760, 910, 1028, 1042
NmuCI	GTSAC	1 cut(s)	1318
NspV	TTCGAA	4 cut(s)	594, 849, 873, 1057
PaeR7I	CTCGAG	1 cut(s)	989
PcsI	WCGNNNNNNNCGW	1 cut(s)	987
PdiI	GCCGGC	1 cut(s)	544
PdmI	GAANNNNTTC	2 cut(s)	107, 1406
PfeI	GAWTC	5 cut(s)	103, 182, 283, 655, 1407
Pfl23II	CGTACG	2 cut(s)	149, 168
PflFI	GACNNNGTC	2 cut(s)	512, 1337
PinAI	ACCGGT	1 cut(s)	843
PkrI	GCNGC	6 cut(s)	15, 399, 441, 920, 1164, 1177
PleI	GAGTC	4 cut(s)	213, 452, 1000, 1040
PluTI	GGCGCC	2 cut(s)	543, 885
PmaCI	CACGTG	1 cut(s)	1215
PmlI	CACGTG	1 cut(s)	1215
PpsI	GAGTC	4 cut(s)	213, 452, 1000, 1040
Ppu21I	YACGTR	3 cut(s)	168, 254, 1215
PpuMI	RGGWCCY	1 cut(s)	679
PsiI	TTATAA	2 cut(s)	51, 363
Psp124BI	GAGCTC	1 cut(s)	906
Psp5II	RGGWCCY	1 cut(s)	679
Psp6I	CCWGG	2 cut(s)	55, 1152
PspCI	CACGTG	1 cut(s)	1215
PspFI	CCCAGC	2 cut(s)	444, 466
PspGI	CCWGG	2 cut(s)	55, 1152
PspLI	CGTACG	2 cut(s)	149, 168
PspOMI	GGGCCC	2 cut(s)	447, 1148
PspPI	GGNCC	8 cut(s)	447, 448, 464, 679, 810, 1148, 1149, 1197
PspPPI	RGGWCCY	1 cut(s)	679
PspXI	VCTCGAGB	1 cut(s)	989
PsuI	RGATCY	1 cut(s)	1156
PsyI	GACNNNGTC	2 cut(s)	512, 1337
PvuII	CAGCTG	1 cut(s)	238
RsaI	GTAC	6 cut(s)	151, 166, 170, 256, 911, 1115
RsaNI	GTAC	6 cut(s)	150, 165, 169, 255, 910, 1114
RseI	CAYNNNNRTG	1 cut(s)	94
SacI	GAGCTC	1 cut(s)	906
SalI	GTCGAC	1 cut(s)	1043
SaqAI	TTAA	2 cut(s)	245, 1107
SatI	GCNGC	6 cut(s)	14, 398, 440, 919, 1163, 1176
Sau3AI	GATC	5 cut(s)	157, 175, 328, 1156, 1236
Sau96I	GGNCC	8 cut(s)	447, 448, 464, 679, 810, 1148, 1149, 1197
SchI	GAGTC	4 cut(s)	213, 452, 1001, 1040
ScrFI	CCNGG	6 cut(s)	57, 855, 1063, 1122, 1147, 1154
SduI	GDGCHC	4 cut(s)	451, 906, 1089, 1152
SfaNI	GCATC	3 cut(s)	479, 606, 1177
SfoI	GGCGCC	2 cut(s)	541, 883
Sfr274I	CTCGAG	1 cut(s)	989
SfuI	TTCGAA	4 cut(s)	594, 849, 873, 1057
SgrAI	CRCCGGYG	1 cut(s)	536
SinI	GGWCC	2 cut(s)	679, 810
SlaI	CTCGAG	1 cut(s)	989
SmiMI	CAYNNNNRTG	1 cut(s)	94
SmlI	CTYRAG	1 cut(s)	989
SmoI	CTYRAG	1 cut(s)	989
SnaBI	TACGTA	1 cut(s)	168
Sse9I	AATT	3 cut(s)	8, 242, 1395
SspDI	GGCGCC	2 cut(s)	539, 881
SspI	AATATT	2 cut(s)	359, 367
SspMI	CTAG	1 cut(s)	1289
SstI	GAGCTC	1 cut(s)	906
StyD4I	CCNGG	6 cut(s)	55, 853, 1061, 1120, 1145, 1152
TaaI	ACNGT	1 cut(s)	343
TaiI	ACGT	6 cut(s)	89, 170, 174, 256, 1217, 1325
TasI	AATT	3 cut(s)	8, 242, 1395
TauI	GCSGC	2 cut(s)	400, 442
TfiI	GAWTC	5 cut(s)	103, 182, 283, 655, 1407
Tru1I	TTAA	2 cut(s)	245, 1107
Tru9I	TTAA	2 cut(s)	245, 1107
TscAI	CASTG	2 cut(s)	167, 1139
TseFI	GTSAC	1 cut(s)	1318
TseI	GCWGC	4 cut(s)	13, 918, 1162, 1175
Tsp45I	GTSAC	1 cut(s)	1318
TspDTI	ATGAA	3 cut(s)	17, 100, 571
TspGWI	ACGGA	4 cut(s)	276, 300, 1297, 1313
TspRI	CASTG	2 cut(s)	167, 1139
Tth111I	GACNNNGTC	2 cut(s)	512, 1337
VpaK11BI	GGWCC	2 cut(s)	679, 810
XhoI	CTCGAG	1 cut(s)	989
XmiI	GTMKAC	3 cut(s)	624, 840, 1044
XmnI	GAANNNNTTC	2 cut(s)	107, 1406
XspI	CTAG	1 cut(s)	1289
ZraI	GACGTC	1 cut(s)	1323

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.