Prupe.1G312400_v2.0.a1

Adenylate isopentenyltransferase-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
30302601 .. 30304987
2387 bp
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UTR
Exon/CDS
Intron
Prupe.1G312400.1

Sequence Viewer

Length: 1140 bp
ATGACACTTCATCCCTTCCCAACTCACTCCCACCACCATTATTCTAATCTCAATTTCAATTTATATTCTTATATCTCTCGTTTCCACTTGTTACCGCCGGTCAACCACCTCTGCCCTACCACTCCTTCCCATCATCATCCTCTCCCCCACAACAAGCCCCGCCACTGGGCCCACATGGCCTCCGGCCCCACCACCCCACGCCAACGACAACAGCAACAACAGCGCAAGGACAAGCTTCTCATTATCATGGGCGCCACAGGCGCTGGCAAGTCCCGCCTCTCCCTCGACCTCGCCACCCGCTTCCCTTCCTTCGAAATCGTCAACTCCGACAAAATGCAACTCTACGCCGGCCTCGACATCACCACCAACAAGCTTCCCATCCCCGACCGCCTCGGCGTCCCCCACCATCTCCTCGGCGAGTTCGACCCTCGCCACGGCGATTTTACTCCCTCCCAATTCCGCGCAGTCGCCGGTCAAGCCATTTCCAGCATTACGAATCGAAGGAAGGTGCCGATGCTCGTCGGCGGCTCCAACTCCTTCATTCATGCGCTCCTCGTGGACCGGTTCGAACCGGGCTCCAATGTCTTCGAACCGGGTTTCAATGGCTCTGTCTCTTCCGAGCTCAGGTATAATTGCTGTTTTCTGTGGGTGGACGTGTCGTTGGCGGTCTTGACTGAGTACTTGTGCAAGCGAGTGGACGAAATGCTCGACTCTGGGATGTTGGACGAGTTGGCAGAGTTCTGCGACCCGGATCGCCAGGACGAAGACGAATCGACGGCGAGTCAGACAGCGTTGAGAAAGGCGATTGGGGTTCCCGAGTTCACTAGGTATTTTAAAAGGTATCCACCGCAGGGGAGAGGCGGGGAGGGTGATGATCGGGAGCGGAGGGGAGCATACGAAGAGGCGGTGAGGGCGATCAAGGACAACACGTGTCAGCTGGCGAAGAGGCAGATAGGTAAGATCCTACGGCTGAAGGGAGGAGGGTGGGACCTACAGAGGCTAGATGCAACGGACGCATTTAGGGCGGTGGTTGCTACGACGTCGTCGGATGAGGACGACGGAAAGAGGTGGTCAGAGATATGGGAGAGGCAGGTTGTCAAACCAAGCGTGAAGGTTGTGAAGCGCTTCTTGGAGGAGTAG

Protein Analysis

380

Amino Acids

42.96

Weight (kDa)

8.46

Isoelectric Point (pI)

42.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1043
Acc36I ACCTGC 1 cut(s) 1081
AccB1I GGYRCC 2 cut(s) 251, 508
AccBSI CCGCTC 1 cut(s) 883
AccII CGCG 1 cut(s) 462
AclWI GGATC 2 cut(s) 759, 955
AcuI CTGAAG 1 cut(s) 992
AcvI CACGTG 1 cut(s) 930
AcyI GRCGYC 3 cut(s) 252, 396, 1040
AfaI GTAC 1 cut(s) 680
AfeI AGCGCT 1 cut(s) 1124
AfiI CCNNNNNNNGG 5 cut(s) 165, 166, 434, 624, 851
AflIII ACRYGT 3 cut(s) 654, 927, 929
AgeI ACCGGT 1 cut(s) 561
AgsI TTSAA 2 cut(s) 58, 601
AhdI GACNNNNNGTC 1 cut(s) 780
AjiI CACGTC 1 cut(s) 655
AjnI CCWGG 1 cut(s) 756
AjuI GAANNNNNNNTTGG 1 cut(s) 1112
AluBI AGCT 4 cut(s) 235, 373, 622, 937
AluI AGCT 4 cut(s) 235, 373, 622, 937
Alw21I GWGCWC 1 cut(s) 624
Alw26I GTCTC 1 cut(s) 616
AlwI GGATC 2 cut(s) 759, 955
AlwNI CAGNNNCTG 1 cut(s) 263
Ama87I CYCGRG 1 cut(s) 815
Aor51HI AGCGCT 1 cut(s) 1124
AoxI GGCC 4 cut(s) 168, 177, 184, 349
ApaI GGGCCC 1 cut(s) 172
AsiGI ACCGGT 1 cut(s) 561
Asp700I GAANNNNTTC 1 cut(s) 1124
AspLEI GCGC 6 cut(s) 225, 254, 263, 464, 550, 1125
AspS9I GGNCC 5 cut(s) 168, 169, 185, 559, 988
AsuC2I CCSGG 3 cut(s) 573, 594, 749
AsuHPI GGTGA 3 cut(s) 352, 881, 919
AsuII TTCGAA 3 cut(s) 312, 567, 588
AvaI CYCGRG 1 cut(s) 815
AvaII GGWCC 2 cut(s) 559, 988
BaeGI GKGCMC 1 cut(s) 172
BanI GGYRCC 2 cut(s) 251, 508
BanII GRGCYC 3 cut(s) 172, 578, 624
BauI CACGAG 1 cut(s) 554
BbrPI CACGTG 1 cut(s) 930
BbsI GAAGAC 2 cut(s) 577, 771
Bbv12I GWGCWC 1 cut(s) 624
BccI CCATC 3 cut(s) 138, 386, 414
BceAI ACGGC 3 cut(s) 451, 792, 983
BciT130I CCWGG 1 cut(s) 758
BciVI GTATCC 1 cut(s) 852
BcnI CCSGG 3 cut(s) 573, 594, 749
BcoDI GTCTC 1 cut(s) 616
BfaI CTAG 2 cut(s) 825, 1001
BfmI CTRYAG 1 cut(s) 992
BfoI RGCGCY 3 cut(s) 255, 264, 1126
BfuAI ACCTGC 1 cut(s) 1081
BfuI GTATCC 1 cut(s) 852
BglI GCCNNNNNGGC 1 cut(s) 176
BisI GCNGC 1 cut(s) 526
BlsI GCNGC 1 cut(s) 527
BmcAI AGTACT 1 cut(s) 680
Bme1390I CCNGG 4 cut(s) 573, 594, 749, 758
Bme18I GGWCC 2 cut(s) 559, 988
BmeRI GACNNNNNGTC 1 cut(s) 780
BmeT110I CYCGRG 1 cut(s) 815
BmgBI CACGTC 1 cut(s) 655
BmgT120I GGNCC 5 cut(s) 168, 169, 185, 559, 988
BmiI GGNNCC 8 cut(s) 170, 187, 253, 510, 529, 577, 813, 989
BmrFI CCNGG 4 cut(s) 573, 594, 749, 758
BmrI ACTGGG 1 cut(s) 175
BmsI GCATC 2 cut(s) 504, 994
BmuI ACTGGG 1 cut(s) 175
BpiI GAAGAC 2 cut(s) 577, 771
Bpu10I CCTNAGC 1 cut(s) 623
Bpu14I TTCGAA 3 cut(s) 312, 567, 588
BpuMI CCSGG 3 cut(s) 573, 594, 749
BsaAI YACGTR 1 cut(s) 930
BsaHI GRCGYC 3 cut(s) 252, 396, 1040
BsaJI CCNNGG 3 cut(s) 391, 412, 433
BsaWI WCCGGW 1 cut(s) 561
BsaXI ACNNNNNCTCC 2 cut(s) 164, 194
Bsc4I CCNNNNNNNGG 5 cut(s) 165, 166, 434, 624, 851
Bse118I RCCGGY 4 cut(s) 97, 347, 470, 561
Bse1I ACTGG 1 cut(s) 170
BseBI CCWGG 1 cut(s) 758
BseDI CCNNGG 3 cut(s) 391, 412, 433
BseGI GGATG 5 cut(s) 10, 136, 378, 723, 1054
BseLI CCNNNNNNNGG 5 cut(s) 165, 166, 434, 624, 851
BseMII CTCAG 2 cut(s) 637, 666
BseNI ACTGG 1 cut(s) 170
BseRI GAGGAG 3 cut(s) 401, 542, 993
BseSI GKGCMC 1 cut(s) 172
Bsh1236I CGCG 1 cut(s) 462
Bsh1285I CGRYCG 1 cut(s) 388
BshFI GGCC 4 cut(s) 170, 179, 186, 351
BshNI GGYRCC 2 cut(s) 251, 508
BshTI ACCGGT 1 cut(s) 561
BsiEI CGRYCG 1 cut(s) 388
BsiHKAI GWGCWC 1 cut(s) 624
BsiHKCI CYCGRG 1 cut(s) 815
BsiSI CCGG 8 cut(s) 98, 183, 348, 471, 562, 572, 593, 749
BslFI GGGAC 3 cut(s) 256, 383, 1001
BslI CCNNNNNNNGG 5 cut(s) 165, 166, 434, 624, 851
BsmAI GTCTC 1 cut(s) 616
BsmFI GGGAC 3 cut(s) 256, 383, 1001
BsnI GGCC 4 cut(s) 170, 179, 186, 351
BsoBI CYCGRG 1 cut(s) 815
Bsp119I TTCGAA 3 cut(s) 312, 567, 588
Bsp120I GGGCCC 1 cut(s) 168
Bsp1286I GDGCHC 3 cut(s) 172, 578, 624
Bsp143I GATC 4 cut(s) 751, 874, 915, 960
BspANI GGCC 4 cut(s) 170, 179, 186, 351
BspCNI CTCAG 2 cut(s) 636, 667
BspFNI CGCG 1 cut(s) 462
BspLI GGNNCC 8 cut(s) 170, 187, 253, 510, 529, 577, 813, 989
BspMI ACCTGC 1 cut(s) 1081
BspPI GGATC 2 cut(s) 759, 955
BspT104I TTCGAA 3 cut(s) 312, 567, 588
BspT107I GGYRCC 2 cut(s) 251, 508
BsrBI CCGCTC 1 cut(s) 883
BsrFI RCCGGY 4 cut(s) 97, 347, 470, 561
BsrI ACTGG 1 cut(s) 170
BssAI RCCGGY 4 cut(s) 97, 347, 470, 561
BssECI CCNNGG 3 cut(s) 391, 412, 433
BssMI GATC 4 cut(s) 751, 874, 915, 960
BssNI GRCGYC 3 cut(s) 252, 396, 1040
BssSI CACGAG 1 cut(s) 554
Bst2BI CACGAG 1 cut(s) 554
Bst2UI CCWGG 1 cut(s) 758
Bst6I CTCTTC 3 cut(s) 619, 894, 938
BstACI GRCGYC 3 cut(s) 252, 396, 1040
BstBAI YACGTR 1 cut(s) 930
BstBI TTCGAA 3 cut(s) 312, 567, 588
BstC8I GCNNGC 4 cut(s) 265, 349, 689, 939
BstDEI CTNAG 2 cut(s) 623, 675
BstDSI CCRYGG 1 cut(s) 433
BstF5I GGATG 5 cut(s) 10, 136, 378, 723, 1054
BstFNI CGCG 1 cut(s) 462
BstH2I RGCGCY 3 cut(s) 255, 264, 1126
BstHHI GCGC 6 cut(s) 225, 254, 263, 464, 550, 1125
BstKTI GATC 4 cut(s) 754, 877, 918, 963
BstMAI GTCTC 1 cut(s) 616
BstMBI GATC 4 cut(s) 751, 874, 915, 960
BstMCI CGRYCG 1 cut(s) 388
BstNI CCWGG 1 cut(s) 758
BstSCI CCNGG 4 cut(s) 571, 592, 747, 756
BstSFI CTRYAG 1 cut(s) 992
BstSLI GKGCMC 1 cut(s) 172
BstUI CGCG 1 cut(s) 462
BstV2I GAAGAC 2 cut(s) 577, 771
BstX2I RGATCY 1 cut(s) 960
BstYI RGATCY 1 cut(s) 960
BsuI GTATCC 1 cut(s) 852
BsuRI GGCC 4 cut(s) 170, 179, 186, 351
BtgI CCRYGG 1 cut(s) 433
BtrI CACGTC 1 cut(s) 655
BtsCI GGATG 5 cut(s) 10, 136, 378, 723, 1054
BtsIMutI CAGTG 1 cut(s) 163
BveI ACCTGC 1 cut(s) 1081
Cac8I GCNNGC 4 cut(s) 265, 349, 689, 939
CaiI CAGNNNCTG 1 cut(s) 263
CfoI GCGC 6 cut(s) 225, 254, 263, 464, 550, 1125
Cfr10I RCCGGY 4 cut(s) 97, 347, 470, 561
Cfr13I GGNCC 5 cut(s) 168, 169, 185, 559, 988
CseI GACGC 2 cut(s) 385, 1022
Csp6I GTAC 1 cut(s) 679
CspAI ACCGGT 1 cut(s) 561
CviAII CATG 3 cut(s) 175, 247, 545
CviQI GTAC 1 cut(s) 679
DdeI CTNAG 2 cut(s) 623, 675
DinI GGCGCC 1 cut(s) 253
DpnI GATC 4 cut(s) 753, 876, 917, 962
DpnII GATC 4 cut(s) 751, 874, 915, 960
DraI TTTAAA 1 cut(s) 835
DriI GACNNNNNGTC 1 cut(s) 780
Eam1104I CTCTTC 3 cut(s) 619, 894, 938
Eam1105I GACNNNNNGTC 1 cut(s) 780
EarI CTCTTC 3 cut(s) 619, 894, 938
Ecl136II GAGCTC 1 cut(s) 622
Eco24I GRGCYC 3 cut(s) 172, 578, 624
Eco47I GGWCC 2 cut(s) 559, 988
Eco47III AGCGCT 1 cut(s) 1124
Eco53kI GAGCTC 1 cut(s) 622
Eco57I CTGAAG 1 cut(s) 992
Eco72I CACGTG 1 cut(s) 930
Eco88I CYCGRG 1 cut(s) 815
EcoICRI GAGCTC 1 cut(s) 622
EcoO109I RGGNCCY 1 cut(s) 988
EcoRII CCWGG 1 cut(s) 756
EcoT38I GRGCYC 3 cut(s) 172, 578, 624
EgeI GGCGCC 1 cut(s) 253
EheI GGCGCC 1 cut(s) 253
FaeI CATG 3 cut(s) 178, 250, 548
FaiI YATR 8 cut(s) 64, 72, 176, 248, 546, 630, 895, 1081
FalI AAGNNNNNCTT 1 cut(s) 1112
FaqI GGGAC 3 cut(s) 256, 383, 1001
FatI CATG 3 cut(s) 174, 246, 544
FauI CCCGC 4 cut(s) 167, 281, 305, 854
Fnu4HI GCNGC 1 cut(s) 526
FokI GGATG 4 cut(s) 123, 365, 730, 1061
FriOI GRGCYC 3 cut(s) 172, 578, 624
Fsp4HI GCNGC 1 cut(s) 526
FspBI CTAG 2 cut(s) 825, 1001
GlaI GCGC 6 cut(s) 224, 253, 262, 463, 549, 1124
GluI GCNGC 1 cut(s) 526
HaeII RGCGCY 3 cut(s) 255, 264, 1126
HaeIII GGCC 4 cut(s) 170, 179, 186, 351
HapII CCGG 8 cut(s) 98, 183, 348, 471, 562, 572, 593, 749
HgaI GACGC 2 cut(s) 385, 1022
HhaI GCGC 6 cut(s) 225, 254, 263, 464, 550, 1125
Hin1I GRCGYC 3 cut(s) 252, 396, 1040
Hin1II CATG 3 cut(s) 178, 250, 548
Hin6I GCGC 6 cut(s) 223, 252, 261, 462, 548, 1123
HinP1I GCGC 6 cut(s) 223, 252, 261, 462, 548, 1123
HincII GTYRAC 2 cut(s) 103, 322
HindII GTYRAC 2 cut(s) 103, 322
HindIII AAGCTT 2 cut(s) 233, 371
HinfI GANTC 4 cut(s) 496, 710, 770, 781
HpaII CCGG 8 cut(s) 98, 183, 348, 471, 562, 572, 593, 749
HphI GGTGA 3 cut(s) 352, 881, 919
Hpy166II GTNNAC 6 cut(s) 103, 322, 559, 652, 697, 822
Hpy188I TCNGA 5 cut(s) 328, 619, 786, 1048, 1075
Hpy188III TCNNGA 3 cut(s) 670, 815, 878
Hpy8I GTNNAC 6 cut(s) 103, 322, 559, 652, 697, 822
Hpy99I CGWCG 6 cut(s) 524, 778, 1042, 1045, 1048, 1061
HpyAV CCTTC 9 cut(s) 25, 135, 315, 319, 495, 499, 547, 967, 1105
HpyCH4IV ACGT 3 cut(s) 654, 929, 1040
HpyCH4V TGCA 3 cut(s) 337, 687, 1007
HpyF3I CTNAG 2 cut(s) 623, 675
HpySE526I ACGT 3 cut(s) 654, 929, 1040
Hsp92I GRCGYC 3 cut(s) 252, 396, 1040
Hsp92II CATG 3 cut(s) 178, 250, 548
HspAI GCGC 6 cut(s) 223, 252, 261, 462, 548, 1123
KasI GGCGCC 1 cut(s) 251
KroI GCCGGC 1 cut(s) 347
KroNI GCCGGC 1 cut(s) 349
Kzo9I GATC 4 cut(s) 751, 874, 915, 960
LmnI GCTCC 5 cut(s) 533, 555, 581, 880, 890
LweI GCATC 2 cut(s) 504, 994
MaeI CTAG 2 cut(s) 825, 1001
MaeII ACGT 3 cut(s) 654, 929, 1040
MaeIII GTNAC 1 cut(s) 90
MalI GATC 4 cut(s) 753, 876, 917, 962
MbiI CCGCTC 1 cut(s) 883
MboI GATC 4 cut(s) 751, 874, 915, 960
MboII GAAGA 5 cut(s) 577, 606, 776, 911, 955
MflI RGATCY 1 cut(s) 960
MhlI GDGCHC 3 cut(s) 172, 578, 624
MluCI AATT 4 cut(s) 52, 58, 455, 631
Mly113I GGCGCC 1 cut(s) 252
MlyI GAGTC 2 cut(s) 704, 790
MmeI TCCRAC 4 cut(s) 351, 555, 702, 1026
MroNI GCCGGC 1 cut(s) 347
MroXI GAANNNNTTC 1 cut(s) 1124
MseI TTAA 1 cut(s) 834
MslI CAYNNNNRTG 1 cut(s) 245
MspA1I CMGCKG 1 cut(s) 937
MspI CCGG 8 cut(s) 98, 183, 348, 471, 562, 572, 593, 749
MspR9I CCNGG 4 cut(s) 573, 594, 749, 758
MvaI CCWGG 1 cut(s) 758
MvnI CGCG 1 cut(s) 462
NaeI GCCGGC 1 cut(s) 349
NarI GGCGCC 1 cut(s) 252
NciI CCSGG 3 cut(s) 573, 594, 749
NdeII GATC 4 cut(s) 751, 874, 915, 960
NgoMIV GCCGGC 1 cut(s) 347
NlaIII CATG 3 cut(s) 178, 250, 548
NlaIV GGNNCC 8 cut(s) 170, 187, 253, 510, 529, 577, 813, 989
NmeAIII GCCGAG 2 cut(s) 372, 393
NspV TTCGAA 3 cut(s) 312, 567, 588
PcsI WCGNNNNNNNCGW 4 cut(s) 324, 351, 420, 705
PdiI GCCGGC 1 cut(s) 349
PdmI GAANNNNTTC 1 cut(s) 1124
PfeI GAWTC 2 cut(s) 496, 770
PflFI GACNNNGTC 1 cut(s) 1042
PinAI ACCGGT 1 cut(s) 561
PkrI GCNGC 1 cut(s) 527
PleI GAGTC 2 cut(s) 704, 789
PluTI GGCGCC 1 cut(s) 255
PmaCI CACGTG 1 cut(s) 930
PmlI CACGTG 1 cut(s) 930
PpsI GAGTC 2 cut(s) 704, 789
Ppu21I YACGTR 1 cut(s) 930
PpuMI RGGWCCY 1 cut(s) 988
Psp124BI GAGCTC 1 cut(s) 624
Psp5II RGGWCCY 1 cut(s) 988
Psp6I CCWGG 1 cut(s) 756
PspCI CACGTG 1 cut(s) 930
PspGI CCWGG 1 cut(s) 756
PspN4I GGNNCC 8 cut(s) 170, 187, 253, 510, 529, 577, 813, 989
PspOMI GGGCCC 1 cut(s) 168
PspPI GGNCC 5 cut(s) 168, 169, 185, 559, 988
PspPPI RGGWCCY 1 cut(s) 988
PstNI CAGNNNCTG 1 cut(s) 263
PsuI RGATCY 1 cut(s) 960
PsyI GACNNNGTC 1 cut(s) 1042
PvuII CAGCTG 1 cut(s) 937
RsaI GTAC 1 cut(s) 680
RsaNI GTAC 1 cut(s) 679
RseI CAYNNNNRTG 1 cut(s) 245
SacI GAGCTC 1 cut(s) 624
SaqAI TTAA 1 cut(s) 834
SatI GCNGC 1 cut(s) 526
Sau3AI GATC 4 cut(s) 751, 874, 915, 960
Sau96I GGNCC 5 cut(s) 168, 169, 185, 559, 988
ScaI AGTACT 1 cut(s) 680
SchI GAGTC 2 cut(s) 704, 790
ScrFI CCNGG 4 cut(s) 573, 594, 749, 758
SduI GDGCHC 3 cut(s) 172, 578, 624
SfaNI GCATC 2 cut(s) 504, 994
SfcI CTRYAG 1 cut(s) 992
SfiI GGCCNNNNNGGCC 1 cut(s) 176
SfoI GGCGCC 1 cut(s) 253
SfuI TTCGAA 3 cut(s) 312, 567, 588
SinI GGWCC 2 cut(s) 559, 988
SmiMI CAYNNNNRTG 1 cut(s) 245
Sse9I AATT 4 cut(s) 52, 58, 455, 631
SspDI GGCGCC 1 cut(s) 251
SspMI CTAG 2 cut(s) 825, 1001
SstI GAGCTC 1 cut(s) 624
StyD4I CCNGG 4 cut(s) 571, 592, 747, 756
TaiI ACGT 3 cut(s) 657, 932, 1043
TaqI TCGA 9 cut(s) 285, 312, 354, 423, 499, 567, 588, 708, 773
TasI AATT 4 cut(s) 52, 58, 455, 631
TatI WGTACW 1 cut(s) 678
TauI GCSGC 1 cut(s) 528
TfiI GAWTC 2 cut(s) 496, 770
Tru1I TTAA 1 cut(s) 834
Tru9I TTAA 1 cut(s) 834
TscAI CASTG 1 cut(s) 170
TspDTI ATGAA 2 cut(s) 529, 533
TspGWI ACGGA 2 cut(s) 1025, 1074
TspRI CASTG 1 cut(s) 170
Tth111I GACNNNGTC 1 cut(s) 1042
VpaK11BI GGWCC 2 cut(s) 559, 988
XmnI GAANNNNTTC 1 cut(s) 1124
XspI CTAG 2 cut(s) 825, 1001
ZraI GACGTC 1 cut(s) 1041
ZrmI AGTACT 1 cut(s) 680
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.