Adenylate isopentenyltransferase-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G68460 |
| fragaria_vesca | FvH4_3g05590 FvH4_3g17710 FvH4_4g27230 |
| malus_domestica | MD13G1040600.v1.1 MD16G1041700.v1.1 |
| prunus_persica | Prupe.1G312400_v2.0.a1 |
| pyrus_communis | pycom13g03490 pycom16g03610 |
| rosa_chinensis | RchiOBHm_Chr4g0435021 RchiOBHm_Chr5g0029421 |
| rosa_laevigata | RLG00000006628 RLG00000033164 |
| rosa_multiflora | Rmu_sc0000400.1_g000020 Rmu_sc0001211.1_g000003 Rmu_sc0004373.1_g000012 Rmu_sc0007525.1_g000003 Rmu_sc0007525.1_g000009 Rmu_ssc0000309.1_g000055 |
| rosa_roxburghii | Rroxscaffold_5G00362790 Rroxscaffold_5G00376210 |
| rosa_rugosa | Rorug04G0281800 Rorug05G0114100 |
| rosa_samantha | Rh2CG411300 Rh4AG337200 Rh4BG345100 Rh4CG359900 Rh4DG339600 Rh5AG206200 Rh5BG204700 Rh5CG226700 Rh5DG208300 |
| rosa_wichuraiana | Rw4G029400 Rw5G018760 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 1043 |
| Acc36I | ACCTGC | 1 cut(s) | 1081 |
| AccB1I | GGYRCC | 2 cut(s) | 251, 508 |
| AccBSI | CCGCTC | 1 cut(s) | 883 |
| AccII | CGCG | 1 cut(s) | 462 |
| AclWI | GGATC | 2 cut(s) | 759, 955 |
| AcuI | CTGAAG | 1 cut(s) | 992 |
| AcvI | CACGTG | 1 cut(s) | 930 |
| AcyI | GRCGYC | 3 cut(s) | 252, 396, 1040 |
| AfaI | GTAC | 1 cut(s) | 680 |
| AfeI | AGCGCT | 1 cut(s) | 1124 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 165, 166, 434, 624, 851 |
| AflIII | ACRYGT | 3 cut(s) | 654, 927, 929 |
| AgeI | ACCGGT | 1 cut(s) | 561 |
| AgsI | TTSAA | 2 cut(s) | 58, 601 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 780 |
| AjiI | CACGTC | 1 cut(s) | 655 |
| AjnI | CCWGG | 1 cut(s) | 756 |
| AjuI | GAANNNNNNNTTGG | 1 cut(s) | 1112 |
| AluBI | AGCT | 4 cut(s) | 235, 373, 622, 937 |
| AluI | AGCT | 4 cut(s) | 235, 373, 622, 937 |
| Alw21I | GWGCWC | 1 cut(s) | 624 |
| Alw26I | GTCTC | 1 cut(s) | 616 |
| AlwI | GGATC | 2 cut(s) | 759, 955 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 263 |
| Ama87I | CYCGRG | 1 cut(s) | 815 |
| Aor51HI | AGCGCT | 1 cut(s) | 1124 |
| AoxI | GGCC | 4 cut(s) | 168, 177, 184, 349 |
| ApaI | GGGCCC | 1 cut(s) | 172 |
| AsiGI | ACCGGT | 1 cut(s) | 561 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1124 |
| AspLEI | GCGC | 6 cut(s) | 225, 254, 263, 464, 550, 1125 |
| AspS9I | GGNCC | 5 cut(s) | 168, 169, 185, 559, 988 |
| AsuC2I | CCSGG | 3 cut(s) | 573, 594, 749 |
| AsuHPI | GGTGA | 3 cut(s) | 352, 881, 919 |
| AsuII | TTCGAA | 3 cut(s) | 312, 567, 588 |
| AvaI | CYCGRG | 1 cut(s) | 815 |
| AvaII | GGWCC | 2 cut(s) | 559, 988 |
| BaeGI | GKGCMC | 1 cut(s) | 172 |
| BanI | GGYRCC | 2 cut(s) | 251, 508 |
| BanII | GRGCYC | 3 cut(s) | 172, 578, 624 |
| BauI | CACGAG | 1 cut(s) | 554 |
| BbrPI | CACGTG | 1 cut(s) | 930 |
| BbsI | GAAGAC | 2 cut(s) | 577, 771 |
| Bbv12I | GWGCWC | 1 cut(s) | 624 |
| BccI | CCATC | 3 cut(s) | 138, 386, 414 |
| BceAI | ACGGC | 3 cut(s) | 451, 792, 983 |
| BciT130I | CCWGG | 1 cut(s) | 758 |
| BciVI | GTATCC | 1 cut(s) | 852 |
| BcnI | CCSGG | 3 cut(s) | 573, 594, 749 |
| BcoDI | GTCTC | 1 cut(s) | 616 |
| BfaI | CTAG | 2 cut(s) | 825, 1001 |
| BfmI | CTRYAG | 1 cut(s) | 992 |
| BfoI | RGCGCY | 3 cut(s) | 255, 264, 1126 |
| BfuAI | ACCTGC | 1 cut(s) | 1081 |
| BfuI | GTATCC | 1 cut(s) | 852 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 176 |
| BisI | GCNGC | 1 cut(s) | 526 |
| BlsI | GCNGC | 1 cut(s) | 527 |
| BmcAI | AGTACT | 1 cut(s) | 680 |
| Bme1390I | CCNGG | 4 cut(s) | 573, 594, 749, 758 |
| Bme18I | GGWCC | 2 cut(s) | 559, 988 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 780 |
| BmeT110I | CYCGRG | 1 cut(s) | 815 |
| BmgBI | CACGTC | 1 cut(s) | 655 |
| BmgT120I | GGNCC | 5 cut(s) | 168, 169, 185, 559, 988 |
| BmiI | GGNNCC | 8 cut(s) | 170, 187, 253, 510, 529, 577, 813, 989 |
| BmrFI | CCNGG | 4 cut(s) | 573, 594, 749, 758 |
| BmrI | ACTGGG | 1 cut(s) | 175 |
| BmsI | GCATC | 2 cut(s) | 504, 994 |
| BmuI | ACTGGG | 1 cut(s) | 175 |
| BpiI | GAAGAC | 2 cut(s) | 577, 771 |
| Bpu10I | CCTNAGC | 1 cut(s) | 623 |
| Bpu14I | TTCGAA | 3 cut(s) | 312, 567, 588 |
| BpuMI | CCSGG | 3 cut(s) | 573, 594, 749 |
| BsaAI | YACGTR | 1 cut(s) | 930 |
| BsaHI | GRCGYC | 3 cut(s) | 252, 396, 1040 |
| BsaJI | CCNNGG | 3 cut(s) | 391, 412, 433 |
| BsaWI | WCCGGW | 1 cut(s) | 561 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 164, 194 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 165, 166, 434, 624, 851 |
| Bse118I | RCCGGY | 4 cut(s) | 97, 347, 470, 561 |
| Bse1I | ACTGG | 1 cut(s) | 170 |
| BseBI | CCWGG | 1 cut(s) | 758 |
| BseDI | CCNNGG | 3 cut(s) | 391, 412, 433 |
| BseGI | GGATG | 5 cut(s) | 10, 136, 378, 723, 1054 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 165, 166, 434, 624, 851 |
| BseMII | CTCAG | 2 cut(s) | 637, 666 |
| BseNI | ACTGG | 1 cut(s) | 170 |
| BseRI | GAGGAG | 3 cut(s) | 401, 542, 993 |
| BseSI | GKGCMC | 1 cut(s) | 172 |
| Bsh1236I | CGCG | 1 cut(s) | 462 |
| Bsh1285I | CGRYCG | 1 cut(s) | 388 |
| BshFI | GGCC | 4 cut(s) | 170, 179, 186, 351 |
| BshNI | GGYRCC | 2 cut(s) | 251, 508 |
| BshTI | ACCGGT | 1 cut(s) | 561 |
| BsiEI | CGRYCG | 1 cut(s) | 388 |
| BsiHKAI | GWGCWC | 1 cut(s) | 624 |
| BsiHKCI | CYCGRG | 1 cut(s) | 815 |
| BsiSI | CCGG | 8 cut(s) | 98, 183, 348, 471, 562, 572, 593, 749 |
| BslFI | GGGAC | 3 cut(s) | 256, 383, 1001 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 165, 166, 434, 624, 851 |
| BsmAI | GTCTC | 1 cut(s) | 616 |
| BsmFI | GGGAC | 3 cut(s) | 256, 383, 1001 |
| BsnI | GGCC | 4 cut(s) | 170, 179, 186, 351 |
| BsoBI | CYCGRG | 1 cut(s) | 815 |
| Bsp119I | TTCGAA | 3 cut(s) | 312, 567, 588 |
| Bsp120I | GGGCCC | 1 cut(s) | 168 |
| Bsp1286I | GDGCHC | 3 cut(s) | 172, 578, 624 |
| Bsp143I | GATC | 4 cut(s) | 751, 874, 915, 960 |
| BspANI | GGCC | 4 cut(s) | 170, 179, 186, 351 |
| BspCNI | CTCAG | 2 cut(s) | 636, 667 |
| BspFNI | CGCG | 1 cut(s) | 462 |
| BspLI | GGNNCC | 8 cut(s) | 170, 187, 253, 510, 529, 577, 813, 989 |
| BspMI | ACCTGC | 1 cut(s) | 1081 |
| BspPI | GGATC | 2 cut(s) | 759, 955 |
| BspT104I | TTCGAA | 3 cut(s) | 312, 567, 588 |
| BspT107I | GGYRCC | 2 cut(s) | 251, 508 |
| BsrBI | CCGCTC | 1 cut(s) | 883 |
| BsrFI | RCCGGY | 4 cut(s) | 97, 347, 470, 561 |
| BsrI | ACTGG | 1 cut(s) | 170 |
| BssAI | RCCGGY | 4 cut(s) | 97, 347, 470, 561 |
| BssECI | CCNNGG | 3 cut(s) | 391, 412, 433 |
| BssMI | GATC | 4 cut(s) | 751, 874, 915, 960 |
| BssNI | GRCGYC | 3 cut(s) | 252, 396, 1040 |
| BssSI | CACGAG | 1 cut(s) | 554 |
| Bst2BI | CACGAG | 1 cut(s) | 554 |
| Bst2UI | CCWGG | 1 cut(s) | 758 |
| Bst6I | CTCTTC | 3 cut(s) | 619, 894, 938 |
| BstACI | GRCGYC | 3 cut(s) | 252, 396, 1040 |
| BstBAI | YACGTR | 1 cut(s) | 930 |
| BstBI | TTCGAA | 3 cut(s) | 312, 567, 588 |
| BstC8I | GCNNGC | 4 cut(s) | 265, 349, 689, 939 |
| BstDEI | CTNAG | 2 cut(s) | 623, 675 |
| BstDSI | CCRYGG | 1 cut(s) | 433 |
| BstF5I | GGATG | 5 cut(s) | 10, 136, 378, 723, 1054 |
| BstFNI | CGCG | 1 cut(s) | 462 |
| BstH2I | RGCGCY | 3 cut(s) | 255, 264, 1126 |
| BstHHI | GCGC | 6 cut(s) | 225, 254, 263, 464, 550, 1125 |
| BstKTI | GATC | 4 cut(s) | 754, 877, 918, 963 |
| BstMAI | GTCTC | 1 cut(s) | 616 |
| BstMBI | GATC | 4 cut(s) | 751, 874, 915, 960 |
| BstMCI | CGRYCG | 1 cut(s) | 388 |
| BstNI | CCWGG | 1 cut(s) | 758 |
| BstSCI | CCNGG | 4 cut(s) | 571, 592, 747, 756 |
| BstSFI | CTRYAG | 1 cut(s) | 992 |
| BstSLI | GKGCMC | 1 cut(s) | 172 |
| BstUI | CGCG | 1 cut(s) | 462 |
| BstV2I | GAAGAC | 2 cut(s) | 577, 771 |
| BstX2I | RGATCY | 1 cut(s) | 960 |
| BstYI | RGATCY | 1 cut(s) | 960 |
| BsuI | GTATCC | 1 cut(s) | 852 |
| BsuRI | GGCC | 4 cut(s) | 170, 179, 186, 351 |
| BtgI | CCRYGG | 1 cut(s) | 433 |
| BtrI | CACGTC | 1 cut(s) | 655 |
| BtsCI | GGATG | 5 cut(s) | 10, 136, 378, 723, 1054 |
| BtsIMutI | CAGTG | 1 cut(s) | 163 |
| BveI | ACCTGC | 1 cut(s) | 1081 |
| Cac8I | GCNNGC | 4 cut(s) | 265, 349, 689, 939 |
| CaiI | CAGNNNCTG | 1 cut(s) | 263 |
| CfoI | GCGC | 6 cut(s) | 225, 254, 263, 464, 550, 1125 |
| Cfr10I | RCCGGY | 4 cut(s) | 97, 347, 470, 561 |
| Cfr13I | GGNCC | 5 cut(s) | 168, 169, 185, 559, 988 |
| CseI | GACGC | 2 cut(s) | 385, 1022 |
| Csp6I | GTAC | 1 cut(s) | 679 |
| CspAI | ACCGGT | 1 cut(s) | 561 |
| CviAII | CATG | 3 cut(s) | 175, 247, 545 |
| CviQI | GTAC | 1 cut(s) | 679 |
| DdeI | CTNAG | 2 cut(s) | 623, 675 |
| DinI | GGCGCC | 1 cut(s) | 253 |
| DpnI | GATC | 4 cut(s) | 753, 876, 917, 962 |
| DpnII | GATC | 4 cut(s) | 751, 874, 915, 960 |
| DraI | TTTAAA | 1 cut(s) | 835 |
| DriI | GACNNNNNGTC | 1 cut(s) | 780 |
| Eam1104I | CTCTTC | 3 cut(s) | 619, 894, 938 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 780 |
| EarI | CTCTTC | 3 cut(s) | 619, 894, 938 |
| Ecl136II | GAGCTC | 1 cut(s) | 622 |
| Eco24I | GRGCYC | 3 cut(s) | 172, 578, 624 |
| Eco47I | GGWCC | 2 cut(s) | 559, 988 |
| Eco47III | AGCGCT | 1 cut(s) | 1124 |
| Eco53kI | GAGCTC | 1 cut(s) | 622 |
| Eco57I | CTGAAG | 1 cut(s) | 992 |
| Eco72I | CACGTG | 1 cut(s) | 930 |
| Eco88I | CYCGRG | 1 cut(s) | 815 |
| EcoICRI | GAGCTC | 1 cut(s) | 622 |
| EcoO109I | RGGNCCY | 1 cut(s) | 988 |
| EcoRII | CCWGG | 1 cut(s) | 756 |
| EcoT38I | GRGCYC | 3 cut(s) | 172, 578, 624 |
| EgeI | GGCGCC | 1 cut(s) | 253 |
| EheI | GGCGCC | 1 cut(s) | 253 |
| FaeI | CATG | 3 cut(s) | 178, 250, 548 |
| FaiI | YATR | 8 cut(s) | 64, 72, 176, 248, 546, 630, 895, 1081 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 1112 |
| FaqI | GGGAC | 3 cut(s) | 256, 383, 1001 |
| FatI | CATG | 3 cut(s) | 174, 246, 544 |
| FauI | CCCGC | 4 cut(s) | 167, 281, 305, 854 |
| Fnu4HI | GCNGC | 1 cut(s) | 526 |
| FokI | GGATG | 4 cut(s) | 123, 365, 730, 1061 |
| FriOI | GRGCYC | 3 cut(s) | 172, 578, 624 |
| Fsp4HI | GCNGC | 1 cut(s) | 526 |
| FspBI | CTAG | 2 cut(s) | 825, 1001 |
| GlaI | GCGC | 6 cut(s) | 224, 253, 262, 463, 549, 1124 |
| GluI | GCNGC | 1 cut(s) | 526 |
| HaeII | RGCGCY | 3 cut(s) | 255, 264, 1126 |
| HaeIII | GGCC | 4 cut(s) | 170, 179, 186, 351 |
| HapII | CCGG | 8 cut(s) | 98, 183, 348, 471, 562, 572, 593, 749 |
| HgaI | GACGC | 2 cut(s) | 385, 1022 |
| HhaI | GCGC | 6 cut(s) | 225, 254, 263, 464, 550, 1125 |
| Hin1I | GRCGYC | 3 cut(s) | 252, 396, 1040 |
| Hin1II | CATG | 3 cut(s) | 178, 250, 548 |
| Hin6I | GCGC | 6 cut(s) | 223, 252, 261, 462, 548, 1123 |
| HinP1I | GCGC | 6 cut(s) | 223, 252, 261, 462, 548, 1123 |
| HincII | GTYRAC | 2 cut(s) | 103, 322 |
| HindII | GTYRAC | 2 cut(s) | 103, 322 |
| HindIII | AAGCTT | 2 cut(s) | 233, 371 |
| HinfI | GANTC | 4 cut(s) | 496, 710, 770, 781 |
| HpaII | CCGG | 8 cut(s) | 98, 183, 348, 471, 562, 572, 593, 749 |
| HphI | GGTGA | 3 cut(s) | 352, 881, 919 |
| Hpy166II | GTNNAC | 6 cut(s) | 103, 322, 559, 652, 697, 822 |
| Hpy188I | TCNGA | 5 cut(s) | 328, 619, 786, 1048, 1075 |
| Hpy188III | TCNNGA | 3 cut(s) | 670, 815, 878 |
| Hpy8I | GTNNAC | 6 cut(s) | 103, 322, 559, 652, 697, 822 |
| Hpy99I | CGWCG | 6 cut(s) | 524, 778, 1042, 1045, 1048, 1061 |
| HpyAV | CCTTC | 9 cut(s) | 25, 135, 315, 319, 495, 499, 547, 967, 1105 |
| HpyCH4IV | ACGT | 3 cut(s) | 654, 929, 1040 |
| HpyCH4V | TGCA | 3 cut(s) | 337, 687, 1007 |
| HpyF3I | CTNAG | 2 cut(s) | 623, 675 |
| HpySE526I | ACGT | 3 cut(s) | 654, 929, 1040 |
| Hsp92I | GRCGYC | 3 cut(s) | 252, 396, 1040 |
| Hsp92II | CATG | 3 cut(s) | 178, 250, 548 |
| HspAI | GCGC | 6 cut(s) | 223, 252, 261, 462, 548, 1123 |
| KasI | GGCGCC | 1 cut(s) | 251 |
| KroI | GCCGGC | 1 cut(s) | 347 |
| KroNI | GCCGGC | 1 cut(s) | 349 |
| Kzo9I | GATC | 4 cut(s) | 751, 874, 915, 960 |
| LmnI | GCTCC | 5 cut(s) | 533, 555, 581, 880, 890 |
| LweI | GCATC | 2 cut(s) | 504, 994 |
| MaeI | CTAG | 2 cut(s) | 825, 1001 |
| MaeII | ACGT | 3 cut(s) | 654, 929, 1040 |
| MaeIII | GTNAC | 1 cut(s) | 90 |
| MalI | GATC | 4 cut(s) | 753, 876, 917, 962 |
| MbiI | CCGCTC | 1 cut(s) | 883 |
| MboI | GATC | 4 cut(s) | 751, 874, 915, 960 |
| MboII | GAAGA | 5 cut(s) | 577, 606, 776, 911, 955 |
| MflI | RGATCY | 1 cut(s) | 960 |
| MhlI | GDGCHC | 3 cut(s) | 172, 578, 624 |
| MluCI | AATT | 4 cut(s) | 52, 58, 455, 631 |
| Mly113I | GGCGCC | 1 cut(s) | 252 |
| MlyI | GAGTC | 2 cut(s) | 704, 790 |
| MmeI | TCCRAC | 4 cut(s) | 351, 555, 702, 1026 |
| MroNI | GCCGGC | 1 cut(s) | 347 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1124 |
| MseI | TTAA | 1 cut(s) | 834 |
| MslI | CAYNNNNRTG | 1 cut(s) | 245 |
| MspA1I | CMGCKG | 1 cut(s) | 937 |
| MspI | CCGG | 8 cut(s) | 98, 183, 348, 471, 562, 572, 593, 749 |
| MspR9I | CCNGG | 4 cut(s) | 573, 594, 749, 758 |
| MvaI | CCWGG | 1 cut(s) | 758 |
| MvnI | CGCG | 1 cut(s) | 462 |
| NaeI | GCCGGC | 1 cut(s) | 349 |
| NarI | GGCGCC | 1 cut(s) | 252 |
| NciI | CCSGG | 3 cut(s) | 573, 594, 749 |
| NdeII | GATC | 4 cut(s) | 751, 874, 915, 960 |
| NgoMIV | GCCGGC | 1 cut(s) | 347 |
| NlaIII | CATG | 3 cut(s) | 178, 250, 548 |
| NlaIV | GGNNCC | 8 cut(s) | 170, 187, 253, 510, 529, 577, 813, 989 |
| NmeAIII | GCCGAG | 2 cut(s) | 372, 393 |
| NspV | TTCGAA | 3 cut(s) | 312, 567, 588 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 324, 351, 420, 705 |
| PdiI | GCCGGC | 1 cut(s) | 349 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1124 |
| PfeI | GAWTC | 2 cut(s) | 496, 770 |
| PflFI | GACNNNGTC | 1 cut(s) | 1042 |
| PinAI | ACCGGT | 1 cut(s) | 561 |
| PkrI | GCNGC | 1 cut(s) | 527 |
| PleI | GAGTC | 2 cut(s) | 704, 789 |
| PluTI | GGCGCC | 1 cut(s) | 255 |
| PmaCI | CACGTG | 1 cut(s) | 930 |
| PmlI | CACGTG | 1 cut(s) | 930 |
| PpsI | GAGTC | 2 cut(s) | 704, 789 |
| Ppu21I | YACGTR | 1 cut(s) | 930 |
| PpuMI | RGGWCCY | 1 cut(s) | 988 |
| Psp124BI | GAGCTC | 1 cut(s) | 624 |
| Psp5II | RGGWCCY | 1 cut(s) | 988 |
| Psp6I | CCWGG | 1 cut(s) | 756 |
| PspCI | CACGTG | 1 cut(s) | 930 |
| PspGI | CCWGG | 1 cut(s) | 756 |
| PspN4I | GGNNCC | 8 cut(s) | 170, 187, 253, 510, 529, 577, 813, 989 |
| PspOMI | GGGCCC | 1 cut(s) | 168 |
| PspPI | GGNCC | 5 cut(s) | 168, 169, 185, 559, 988 |
| PspPPI | RGGWCCY | 1 cut(s) | 988 |
| PstNI | CAGNNNCTG | 1 cut(s) | 263 |
| PsuI | RGATCY | 1 cut(s) | 960 |
| PsyI | GACNNNGTC | 1 cut(s) | 1042 |
| PvuII | CAGCTG | 1 cut(s) | 937 |
| RsaI | GTAC | 1 cut(s) | 680 |
| RsaNI | GTAC | 1 cut(s) | 679 |
| RseI | CAYNNNNRTG | 1 cut(s) | 245 |
| SacI | GAGCTC | 1 cut(s) | 624 |
| SaqAI | TTAA | 1 cut(s) | 834 |
| SatI | GCNGC | 1 cut(s) | 526 |
| Sau3AI | GATC | 4 cut(s) | 751, 874, 915, 960 |
| Sau96I | GGNCC | 5 cut(s) | 168, 169, 185, 559, 988 |
| ScaI | AGTACT | 1 cut(s) | 680 |
| SchI | GAGTC | 2 cut(s) | 704, 790 |
| ScrFI | CCNGG | 4 cut(s) | 573, 594, 749, 758 |
| SduI | GDGCHC | 3 cut(s) | 172, 578, 624 |
| SfaNI | GCATC | 2 cut(s) | 504, 994 |
| SfcI | CTRYAG | 1 cut(s) | 992 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 176 |
| SfoI | GGCGCC | 1 cut(s) | 253 |
| SfuI | TTCGAA | 3 cut(s) | 312, 567, 588 |
| SinI | GGWCC | 2 cut(s) | 559, 988 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 245 |
| Sse9I | AATT | 4 cut(s) | 52, 58, 455, 631 |
| SspDI | GGCGCC | 1 cut(s) | 251 |
| SspMI | CTAG | 2 cut(s) | 825, 1001 |
| SstI | GAGCTC | 1 cut(s) | 624 |
| StyD4I | CCNGG | 4 cut(s) | 571, 592, 747, 756 |
| TaiI | ACGT | 3 cut(s) | 657, 932, 1043 |
| TaqI | TCGA | 9 cut(s) | 285, 312, 354, 423, 499, 567, 588, 708, 773 |
| TasI | AATT | 4 cut(s) | 52, 58, 455, 631 |
| TatI | WGTACW | 1 cut(s) | 678 |
| TauI | GCSGC | 1 cut(s) | 528 |
| TfiI | GAWTC | 2 cut(s) | 496, 770 |
| Tru1I | TTAA | 1 cut(s) | 834 |
| Tru9I | TTAA | 1 cut(s) | 834 |
| TscAI | CASTG | 1 cut(s) | 170 |
| TspDTI | ATGAA | 2 cut(s) | 529, 533 |
| TspGWI | ACGGA | 2 cut(s) | 1025, 1074 |
| TspRI | CASTG | 1 cut(s) | 170 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1042 |
| VpaK11BI | GGWCC | 2 cut(s) | 559, 988 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1124 |
| XspI | CTAG | 2 cut(s) | 825, 1001 |
| ZraI | GACGTC | 1 cut(s) | 1041 |
| ZrmI | AGTACT | 1 cut(s) | 680 |