Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0005777

Physical Location & Seq

Genomic Coordinates Reverse (-)

9325819 .. 9329982

Gene Structure 4164 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g15060.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1767 bp

ATGCAATCATTGTGGAAAAGGAGTCACCTTCAAGAAGCTCTGAGACTTGGTCAATCGTACCCAACTCACTTGGATCATTACTATTGCTTGTACATGAAGATTCTGCAGCTCTGCATCGATGAACGAGTAGAAAGACCCGGTCTTTTGGCTCACACCCATATGATAACAAATGGGTTTGCTTCTAATTTGAATTTGAACACCAAATTAATAAACTTTTATTGCAAGTTTGGGCGTGTAGTCACTGCAGGCAAGGTGTTCGATAGAATGCCTGAGAGAAATGTTGTGTCTTGGACCTCTATGGTTTCTGGGTATGCTCAGAGTGGAAACTATGAGAAAGCTTTGGGGGTATTTTTGGAAATGCGTAGAGCGGGGGTGAGGGCTAATCAGTTTGGGTATGGGAGTGCATTGAAGGCATGCACTGGTTTGAGGGCATTGGGAGTAGGGGTGCAGATACAGGGGTGTGTTTTGAAAGGAAGGTTTGGTGAGAACTTGTTTGTGAGAAGTGCACTAGTTGATTTTCATGCCAAGTGTGGGAAGATGGAAGATGCTTGTTGTGTTTTTGAGGCAATGTCTGAGAGGGACTTGGTTTCTTGGAATGCAATCATTGGAGGGTATGCTGTTCAGGGTTTTGGTGAGGACTCGTTGCGTATGTTTCAGAAAATGATGAGGGAAGGTATGGTTCCTGATTGCTTCACATTCGGGAGTGTTTTGAGAGGCTTGGCCGGAGATAGTGGTTTGGTGAGGATTAGTCAAATGCATGGGTTGATGATGCAACTGGGTTTTGGATCACACAGAAGTTTAAGTGGATCGCTAATCAACGCATATGCAAAATGTGGGAAGGTAGAGTCTGCTCATAGAATATACAGGAGTATGATAAAAAAGGACATTATGTGCTCCACTGCACTAATTAATGGATATGCACGAGAAGGTAACTACAGCGGAGGTGTGTTAGATCTCTTCAAAGAAATGATTGTTATGAACATGAGACTGGATGGTGTCATACTATGCTCCATGCTTAATATATGTGCAAATGTTGCTTCATTGATTTTTGGAAGACAAATCCATGCACTTGTGTTTAAACACCAACCTTCTCTTGACGTGGCCTTGGGGAATGCTCTTGTTGATATGTATGCAAAATGCGGAGAAATTGAAGATGCTAACCATGCTTTTGATGAGATGGAGGAAAAAAATGTAGTTTCATGGACGTCACTGATTTCTGGATATGGAAGGAACGGCCATGGACATAAAGCGATTGCATTATATAGAGAGATGGAGCGTGAGGGATTGAAGCCTAATGATGTTACATTCTTGTCTCTTCTCTTTGCTTGTAGCCATAGTGGATTGACAGATGAAGGATGGGAATGCTTCAGTTCTATGTATAGCAAATATAACATCATGCCTCGAGCTAAGCATTTCTCCTGCTTGGTAGATCTTCATGCACGTGCAGGTTTGCTAGAAGATGCTCATAATTTGATACGGCACATGAATATTAAGCCTAATGCTTCACTTTGGGGAGCCATTCTTGGGGCATGTAGCAACTATGGTAATAAGTCACTTGGGGAAGTGGCAGCAATGCATCTTTATGATATTGATCCAGAGAAATCAGTTAACTATGTTGTTCTTGGAAGCATCTATGCCGCATCTGGTGCTTGGGACAATGCCTTGGAGACACGAGGTCTGGTAGATAACAGGAGTATGAAAAAGGAACCAGCACACAGCCTTTTACAGTCCACAGCTAATAAACCGTTGCTTTTCCAGCCATCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 peroxidase

Protein Analysis

589

Amino Acids

65.18

Weight (kDa)

8.52

Isoelectric Point (pI)

41.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	92 - 139	2.8e-09	PPR repeat family
PPR	PF01535	95 - 125	1.6e-09	PPR repeat
PPR_2	PF13041	194 - 241	2.2e-09	PPR repeat family
PPR	PF01535	196 - 225	8.5e-06	PPR repeat
PPR_2	PF13041	396 - 444	2.9e-14	PPR repeat family
PPR_1	PF12854	397 - 425	9e-06	PPR repeat
PPR	PF01535	399 - 429	4.7e-09	PPR repeat
E_motif	PF20431	514 - 574	3.6e-08	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005777)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G20730
fragaria_vesca	FvH4_3g15060 FvH4_3g15060
malus_domestica	MD05G1227700.v1.1 MD10G1208100.v1.1 MD10G1208200.v1.1
prunus_persica	Prupe.4G134800_v2.0.a1
pyrus_communis	pycom05g20980 pycom05g20990 pycom10g17710
rosa_chinensis	RchiOBHm_Chr5g0024821 RchiOBHm_Chr5g0024861
rosa_laevigata	RLG00000032817
rosa_multiflora	Rmu_co8198802.1_g000001 Rmu_co8370541.1_g000001 Rmu_sc0009744.1_g000006 Rmu_sc0009744.1_g000007
rosa_roxburghii	Rroxscaffold_1G00054560
rosa_rugosa	Rorug05G0084700.1
rosa_samantha	Rh5AG176500 Rh5AG176600 Rh5BG174200 Rh5CG191200 Rh5CG191300 Rh5CG191500 Rh5DG175800 Rh5DG176000
rosa_wichuraiana	Rw5G016000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1208
Acc36I	ACCTGC	1 cut(s)	1436
AccBSI	CCGCTC	1 cut(s)	368
AciI	CCGC	4 cut(s)	368, 939, 1140, 1638
AclWI	GGATC	4 cut(s)	81, 793, 814, 1586
AcoI	YGGCCR	2 cut(s)	720, 1234
AcsI	RAATTY	1 cut(s)	190
AcuI	CTGAAG	1 cut(s)	1351
AcvI	CACGTG	1 cut(s)	1442
AcyI	GRCGYC	1 cut(s)	1205
AfaI	GTAC	2 cut(s)	59, 92
AfiI	CCNNNNNNNGG	2 cut(s)	531, 1524
AgsI	TTSAA	8 cut(s)	32, 190, 196, 409, 469, 961, 1151, 1288
AhdI	GACNNNNNGTC	1 cut(s)	1674
AhlI	ACTAGT	1 cut(s)	508
AjiI	CACGTC	1 cut(s)	1099
AluBI	AGCT	5 cut(s)	38, 109, 338, 1406, 1736
AluI	AGCT	5 cut(s)	38, 109, 338, 1406, 1736
Alw21I	GWGCWC	2 cut(s)	508, 896
Alw26I	GTCTC	4 cut(s)	37, 979, 1317, 1661
Alw44I	GTGCAC	1 cut(s)	504
AlwI	GGATC	4 cut(s)	81, 793, 814, 1586
Ama87I	CYCGRG	1 cut(s)	1401
AoxI	GGCC	3 cut(s)	720, 1101, 1234
ApaLI	GTGCAC	1 cut(s)	504
ApeKI	GCWGC	2 cut(s)	106, 1568
ApoI	RAATTY	1 cut(s)	190
AseI	ATTAAT	2 cut(s)	206, 909
AspS9I	GGNCC	1 cut(s)	291
AsuC2I	CCSGG	1 cut(s)	138
AsuHPI	GGTGA	5 cut(s)	17, 385, 494, 644, 751
AvaI	CYCGRG	1 cut(s)	1401
AvaII	GGWCC	1 cut(s)	291
BaeGI	GKGCMC	1 cut(s)	508
BaeI	ACNNNNGTAYC	2 cut(s)	443, 476
BauI	CACGAG	2 cut(s)	921, 1671
BbrPI	CACGTG	1 cut(s)	1442
BbsI	GAAGAC	1 cut(s)	1060
Bbv12I	GWGCWC	2 cut(s)	508, 896
BbvI	GCAGC	2 cut(s)	118, 1580
BccI	CCATC	5 cut(s)	532, 986, 1171, 1264, 1350
BceAI	ACGGC	2 cut(s)	1249, 1493
BcgI	CGANNNNNNTGC	2 cut(s)	238, 272
BcnI	CCSGG	1 cut(s)	138
BcoDI	GTCTC	4 cut(s)	37, 979, 1317, 1661
BcuI	ACTAGT	1 cut(s)	508
BfaI	CTAG	2 cut(s)	509, 1454
BfmI	CTRYAG	3 cut(s)	104, 243, 934
BfuAI	ACCTGC	1 cut(s)	1436
BglII	AGATCT	2 cut(s)	952, 1429
BisI	GCNGC	3 cut(s)	107, 1569, 1638
BlpI	GCTNAGC	1 cut(s)	1407
BlsI	GCNGC	3 cut(s)	108, 1570, 1639
Bme1390I	CCNGG	1 cut(s)	138
Bme18I	GGWCC	1 cut(s)	291
BmeRI	GACNNNNNGTC	1 cut(s)	1674
BmeT110I	CYCGRG	1 cut(s)	1401
BmgBI	CACGTC	1 cut(s)	1099
BmgT120I	GGNCC	1 cut(s)	291
BmiI	GGNNCC	3 cut(s)	681, 1516, 1707
BmrFI	CCNGG	1 cut(s)	138
BmrI	ACTGGG	1 cut(s)	785
BmsI	GCATC	8 cut(s)	123, 535, 759, 1144, 1450, 1585, 1638, 1649
BmuI	ACTGGG	1 cut(s)	785
BpiI	GAAGAC	1 cut(s)	1060
Bpu1102I	GCTNAGC	1 cut(s)	1407
BpuMI	CCSGG	1 cut(s)	138
Bsa29I	ATCGAT	1 cut(s)	117
BsaAI	YACGTR	1 cut(s)	1442
BsaBI	GATNNNNATC	1 cut(s)	1590
BsaHI	GRCGYC	1 cut(s)	1205
BsaJI	CCNNGG	3 cut(s)	1104, 1237, 1662
BsaXI	ACNNNNNCTCC	2 cut(s)	429, 459
Bsc4I	CCNNNNNNNGG	2 cut(s)	531, 1524
Bse1I	ACTGG	3 cut(s)	424, 780, 993
Bse3DI	GCAATG	2 cut(s)	573, 1578
Bse8I	GATNNNNATC	1 cut(s)	1590
BseCI	ATCGAT	1 cut(s)	117
BseDI	CCNNGG	3 cut(s)	1104, 1237, 1662
BseGI	GGATG	2 cut(s)	997, 1361
BseJI	GATNNNNATC	1 cut(s)	1590
BseLI	CCNNNNNNNGG	2 cut(s)	531, 1524
BseMI	GCAATG	2 cut(s)	573, 1578
BseMII	CTCAG	4 cut(s)	32, 261, 329, 564
BseNI	ACTGG	3 cut(s)	424, 780, 993
BseSI	GKGCMC	1 cut(s)	508
BseXI	GCAGC	2 cut(s)	118, 1580
BsgI	GTGCAG	3 cut(s)	467, 885, 1464
BshFI	GGCC	3 cut(s)	722, 1103, 1236
BshVI	ATCGAT	1 cut(s)	117
BsiHKAI	GWGCWC	2 cut(s)	508, 896
BsiHKCI	CYCGRG	1 cut(s)	1401
BsiSI	CCGG	2 cut(s)	138, 723
BslFI	GGGAC	2 cut(s)	593, 1667
BslI	CCNNNNNNNGG	2 cut(s)	531, 1524
BsmAI	GTCTC	4 cut(s)	37, 979, 1317, 1661
BsmFI	GGGAC	2 cut(s)	593, 1667
BsmI	GAATGC	4 cut(s)	270, 601, 1117, 1367
BsnI	GGCC	3 cut(s)	722, 1103, 1236
BsoBI	CYCGRG	1 cut(s)	1401
Bsp1286I	GDGCHC	2 cut(s)	508, 896
Bsp1407I	TGTACA	1 cut(s)	90
Bsp143I	GATC	6 cut(s)	73, 785, 806, 952, 1429, 1591
Bsp1720I	GCTNAGC	1 cut(s)	1407
Bsp19I	CCATGG	1 cut(s)	1237
BspACI	CCGC	4 cut(s)	368, 939, 1140, 1638
BspANI	GGCC	3 cut(s)	722, 1103, 1236
BspCNI	CTCAG	4 cut(s)	33, 262, 328, 565
BspDI	ATCGAT	1 cut(s)	117
BspLI	GGNNCC	3 cut(s)	681, 1516, 1707
BspMAI	CTGCAG	2 cut(s)	108, 247
BspMI	ACCTGC	1 cut(s)	1436
BspPI	GGATC	4 cut(s)	81, 793, 814, 1586
BsrBI	CCGCTC	1 cut(s)	368
BsrDI	GCAATG	2 cut(s)	573, 1578
BsrGI	TGTACA	1 cut(s)	90
BsrI	ACTGG	3 cut(s)	424, 780, 993
BssECI	CCNNGG	3 cut(s)	1104, 1237, 1662
BssMI	GATC	6 cut(s)	73, 785, 806, 952, 1429, 1591
BssNI	GRCGYC	1 cut(s)	1205
BssSI	CACGAG	2 cut(s)	921, 1671
BssT1I	CCWWGG	3 cut(s)	1104, 1237, 1662
Bst2BI	CACGAG	2 cut(s)	921, 1671
Bst4CI	ACNGT	2 cut(s)	1728, 1746
Bst6I	CTCTTC	2 cut(s)	962, 1320
BstACI	GRCGYC	1 cut(s)	1205
BstAPI	GCANNNNNTGC	2 cut(s)	1034, 1646
BstAUI	TGTACA	1 cut(s)	90
BstBAI	YACGTR	1 cut(s)	1442
BstC8I	GCNNGC	2 cut(s)	247, 415
BstDEI	CTNAG	5 cut(s)	41, 270, 315, 573, 1407
BstDSI	CCRYGG	1 cut(s)	1237
BstF5I	GGATG	2 cut(s)	997, 1361
BstKTI	GATC	6 cut(s)	76, 788, 809, 955, 1432, 1594
BstMAI	GTCTC	4 cut(s)	37, 979, 1317, 1661
BstMBI	GATC	6 cut(s)	73, 785, 806, 952, 1429, 1591
BstMWI	GCNNNNNNNGC	5 cut(s)	410, 1034, 1163, 1646, 1756
BstNSI	RCATGY	2 cut(s)	417, 1533
BstSCI	CCNGG	1 cut(s)	136
BstSFI	CTRYAG	3 cut(s)	104, 243, 934
BstSLI	GKGCMC	1 cut(s)	508
BstV1I	GCAGC	2 cut(s)	118, 1580
BstV2I	GAAGAC	1 cut(s)	1060
BstX2I	RGATCY	2 cut(s)	952, 1429
BstYI	RGATCY	2 cut(s)	952, 1429
Bsu15I	ATCGAT	1 cut(s)	117
BsuRI	GGCC	3 cut(s)	722, 1103, 1236
BsuTUI	ATCGAT	1 cut(s)	117
BtgI	CCRYGG	1 cut(s)	1237
BtrI	CACGTC	1 cut(s)	1099
BtsCI	GGATG	2 cut(s)	997, 1361
BtsI	GCAGTG	2 cut(s)	240, 897
BtsIMutI	CAGTG	4 cut(s)	240, 417, 897, 1208
BveI	ACCTGC	1 cut(s)	1436
Cac8I	GCNNGC	2 cut(s)	247, 415
Cfr13I	GGNCC	1 cut(s)	291
ClaI	ATCGAT	1 cut(s)	117
Csp6I	GTAC	2 cut(s)	58, 91
CspCI	CAANNNNNGTGG	1 cut(s)	28
CviQI	GTAC	2 cut(s)	58, 91
DdeI	CTNAG	5 cut(s)	41, 270, 315, 573, 1407
DpnI	GATC	6 cut(s)	75, 787, 808, 954, 1431, 1593
DpnII	GATC	6 cut(s)	73, 785, 806, 952, 1429, 1591
DraI	TTTAAA	1 cut(s)	1078
DriI	GACNNNNNGTC	1 cut(s)	1674
EaeI	YGGCCR	2 cut(s)	720, 1234
Eam1104I	CTCTTC	2 cut(s)	962, 1320
Eam1105I	GACNNNNNGTC	1 cut(s)	1674
EarI	CTCTTC	2 cut(s)	962, 1320
Eco130I	CCWWGG	3 cut(s)	1104, 1237, 1662
Eco47I	GGWCC	1 cut(s)	291
Eco57I	CTGAAG	1 cut(s)	1351
Eco72I	CACGTG	1 cut(s)	1442
Eco88I	CYCGRG	1 cut(s)	1401
EcoT14I	CCWWGG	3 cut(s)	1104, 1237, 1662
EcoT22I	ATGCAT	2 cut(s)	759, 1578
ErhI	CCWWGG	3 cut(s)	1104, 1237, 1662
FaqI	GGGAC	2 cut(s)	593, 1667
FauI	CCCGC	1 cut(s)	361
FauNDI	CATATG	2 cut(s)	159, 823
Fnu4HI	GCNGC	3 cut(s)	107, 1569, 1638
FokI	GGATG	2 cut(s)	1004, 1368
Fsp4HI	GCNGC	3 cut(s)	107, 1569, 1638
FspBI	CTAG	2 cut(s)	509, 1454
GluI	GCNGC	3 cut(s)	107, 1569, 1638
HaeIII	GGCC	3 cut(s)	722, 1103, 1236
HapII	CCGG	2 cut(s)	138, 723
Hin1I	GRCGYC	1 cut(s)	1205
HincII	GTYRAC	1 cut(s)	1609
HindII	GTYRAC	1 cut(s)	1609
HindIII	AAGCTT	1 cut(s)	336
HinfI	GANTC	4 cut(s)	22, 100, 638, 845
HpaI	GTTAAC	1 cut(s)	1609
HpaII	CCGG	2 cut(s)	138, 723
HphI	GGTGA	5 cut(s)	17, 385, 494, 644, 751
Hpy166II	GTNNAC	3 cut(s)	506, 1609, 1731
Hpy188I	TCNGA	4 cut(s)	42, 318, 574, 657
Hpy188III	TCNNGA	6 cut(s)	32, 683, 700, 1094, 1218, 1595
Hpy8I	GTNNAC	3 cut(s)	506, 1609, 1731
HpyAV	CCTTC	9 cut(s)	38, 403, 468, 665, 832, 920, 1098, 1221, 1346
HpyCH4III	ACNGT	2 cut(s)	1728, 1746
HpyCH4IV	ACGT	3 cut(s)	1098, 1205, 1441
HpyF10VI	GCNNNNNNNGC	5 cut(s)	410, 1034, 1163, 1646, 1756
HpyF3I	CTNAG	5 cut(s)	41, 270, 315, 573, 1407
HpySE526I	ACGT	3 cut(s)	1098, 1205, 1441
Hsp92I	GRCGYC	1 cut(s)	1205
KspAI	GTTAAC	1 cut(s)	1609
Kzo9I	GATC	6 cut(s)	73, 785, 806, 952, 1429, 1591
LmnI	GCTCC	4 cut(s)	899, 1013, 1273, 1514
Lsp1109I	GCAGC	2 cut(s)	118, 1580
LweI	GCATC	8 cut(s)	123, 535, 759, 1144, 1450, 1585, 1638, 1649
MaeI	CTAG	2 cut(s)	509, 1454
MaeII	ACGT	3 cut(s)	1098, 1205, 1441
MaeIII	GTNAC	6 cut(s)	23, 238, 929, 1206, 1300, 1551
MalI	GATC	6 cut(s)	75, 787, 808, 954, 1431, 1593
MbiI	CCGCTC	1 cut(s)	368
MboI	GATC	6 cut(s)	73, 785, 806, 952, 1429, 1591
MboII	GAAGA	9 cut(s)	109, 547, 554, 949, 1065, 1163, 1307, 1424, 1469
MflI	RGATCY	2 cut(s)	952, 1429
MhlI	GDGCHC	2 cut(s)	508, 896
MluCI	AATT	6 cut(s)	184, 190, 203, 906, 1146, 1468
MlyI	GAGTC	3 cut(s)	31, 632, 854
Mph1103I	ATGCAT	2 cut(s)	759, 1578
MseI	TTAA	7 cut(s)	206, 800, 909, 1017, 1077, 1491, 1608
MslI	CAYNNNNRTG	3 cut(s)	158, 1440, 1581
MspA1I	CMGCKG	1 cut(s)	939
MspI	CCGG	2 cut(s)	138, 723
MspR9I	CCNGG	1 cut(s)	138
MssI	GTTTAAAC	1 cut(s)	1078
Mva1269I	GAATGC	4 cut(s)	270, 601, 1117, 1367
MwoI	GCNNNNNNNGC	5 cut(s)	410, 1034, 1163, 1646, 1756
NciI	CCSGG	1 cut(s)	138
NcoI	CCATGG	1 cut(s)	1237
NdeI	CATATG	2 cut(s)	159, 823
NdeII	GATC	6 cut(s)	73, 785, 806, 952, 1429, 1591
NlaIV	GGNNCC	3 cut(s)	681, 1516, 1707
NmuCI	GTSAC	4 cut(s)	23, 238, 1206, 1551
NsiI	ATGCAT	2 cut(s)	759, 1578
NspI	RCATGY	2 cut(s)	417, 1533
PaeI	GCATGC	1 cut(s)	417
PaeR7I	CTCGAG	1 cut(s)	1401
PctI	GAATGC	4 cut(s)	270, 601, 1117, 1367
PfeI	GAWTC	1 cut(s)	100
PflFI	GACNNNGTC	2 cut(s)	48, 138
PkrI	GCNGC	3 cut(s)	108, 1570, 1639
PleI	GAGTC	3 cut(s)	30, 632, 853
PmaCI	CACGTG	1 cut(s)	1442
PmeI	GTTTAAAC	1 cut(s)	1078
PmlI	CACGTG	1 cut(s)	1442
PpsI	GAGTC	3 cut(s)	30, 632, 853
Ppu21I	YACGTR	1 cut(s)	1442
PshBI	ATTAAT	2 cut(s)	206, 909
PspCI	CACGTG	1 cut(s)	1442
PspN4I	GGNNCC	3 cut(s)	681, 1516, 1707
PspPI	GGNCC	1 cut(s)	291
PspXI	VCTCGAGB	1 cut(s)	1401
PstI	CTGCAG	2 cut(s)	108, 247
PsuI	RGATCY	2 cut(s)	952, 1429
PsyI	GACNNNGTC	2 cut(s)	48, 138
RsaI	GTAC	2 cut(s)	59, 92
RsaNI	GTAC	2 cut(s)	58, 91
RseI	CAYNNNNRTG	3 cut(s)	158, 1440, 1581
SaqAI	TTAA	7 cut(s)	206, 800, 909, 1017, 1077, 1491, 1608
SatI	GCNGC	3 cut(s)	107, 1569, 1638
Sau3AI	GATC	6 cut(s)	73, 785, 806, 952, 1429, 1591
Sau96I	GGNCC	1 cut(s)	291
SchI	GAGTC	3 cut(s)	31, 632, 854
ScrFI	CCNGG	1 cut(s)	138
SduI	GDGCHC	2 cut(s)	508, 896
SfaNI	GCATC	8 cut(s)	123, 535, 759, 1144, 1450, 1585, 1638, 1649
SfcI	CTRYAG	3 cut(s)	104, 243, 934
Sfr274I	CTCGAG	1 cut(s)	1401
SinI	GGWCC	1 cut(s)	291
SlaI	CTCGAG	1 cut(s)	1401
SmiMI	CAYNNNNRTG	3 cut(s)	158, 1440, 1581
SmlI	CTYRAG	1 cut(s)	1401
SmoI	CTYRAG	1 cut(s)	1401
SpeI	ACTAGT	1 cut(s)	508
SphI	GCATGC	1 cut(s)	417
Sse9I	AATT	6 cut(s)	184, 190, 203, 906, 1146, 1468
SsiI	CCGC	4 cut(s)	368, 939, 1140, 1638
SspI	AATATT	1 cut(s)	1489
SspMI	CTAG	2 cut(s)	509, 1454
StyD4I	CCNGG	1 cut(s)	136
StyI	CCWWGG	3 cut(s)	1104, 1237, 1662
TaaI	ACNGT	2 cut(s)	1728, 1746
TaiI	ACGT	3 cut(s)	1101, 1208, 1444
TaqI	TCGA	3 cut(s)	117, 258, 1402
TasI	AATT	6 cut(s)	184, 190, 203, 906, 1146, 1468
TatI	WGTACW	1 cut(s)	90
TauI	GCSGC	1 cut(s)	1640
TfiI	GAWTC	1 cut(s)	100
Tru1I	TTAA	7 cut(s)	206, 800, 909, 1017, 1077, 1491, 1608
Tru9I	TTAA	7 cut(s)	206, 800, 909, 1017, 1077, 1491, 1608
TscAI	CASTG	4 cut(s)	247, 424, 904, 1215
TseFI	GTSAC	4 cut(s)	23, 238, 1206, 1551
TseI	GCWGC	2 cut(s)	106, 1568
Tsp45I	GTSAC	4 cut(s)	23, 238, 1206, 1551
TspRI	CASTG	4 cut(s)	247, 424, 904, 1215
Tth111I	GACNNNGTC	2 cut(s)	48, 138
VneI	GTGCAC	1 cut(s)	504
VpaK11BI	GGWCC	1 cut(s)	291
VspI	ATTAAT	2 cut(s)	206, 909
XapI	RAATTY	1 cut(s)	190
XceI	RCATGY	2 cut(s)	417, 1533
XhoI	CTCGAG	1 cut(s)	1401
XspI	CTAG	2 cut(s)	509, 1454
ZraI	GACGTC	1 cut(s)	1206
Zsp2I	ATGCAT	2 cut(s)	759, 1578

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.