Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0005777

Physical Location & Seq

Genomic Coordinates Reverse (-)

18878363 .. 18881478

Gene Structure 3116 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ30454

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1779 bp

ATGCCAAACATAATGCAAGCATTGTGGAAAAGGAGTCACCTTCAAGAAGCTCAGAGACTTGCTCAGTCTAACCCAACTCACTTAGACAATTACTATTGCTTGTATATGAAGATTCTGCAACTCTGCATCGATCAACGAGTAGAAAGACCCGGTCTTTTGGCTCACACCCATGTGATCACAAATGGGTATGCTTCAAATTTGAATTTGAACACCAAATTGATCAACTTTTACTGCAAATTTGGCCGCGTGGTTAGTGCTCGCAAGGTGTTCGATAAAATGCCTGAGAGAAATGTTGTGTCTTGGACCTCTATGGCTTCTGGGTATGCTCAAAGTGGAAGCTATGAGAAAGCTTTGGGGGTGTTTTTGGAAATGCGTCGGGCGGGTTTCAGAGCTAATCAGTTTGGGTATGGGAGTGCATTGAGGGCATGCACTGGTTTGAGGTCTTTGGAAGTAGGAATGCAGATACAGGGGTGTCTTGTGAAAGGAAGGTTTGCTGAGAACTTGTTTGTGCTGAGTGCACTAGTTGATTTTCATGCCAAGTGTGGAAAGATAGAGGATGCTTGCTGTGTTTTCGAGGCAATGTCGGAAAGGGACTTGGTTTCTTGGAATGCAATCATTGGAGGGTATGCTGTTCAGGGTTTTAGTGACGACTCGTTGCGAATGTTTCGGTCAATGATGAGGGAAGGCATGGTTCCTGATTGCTTCACCTTCGGGAGTGTTTTGAGAGGCTTGGCCGGAGATGGTGGTTTGGTGAAGGTCAGTGAAATGCATGGATTGATAATGCATCTGGGTTTTGGATCACACAAAAGTTTGAGTGGATCGCTAATCAATGCATATGCAAAATGTGGGAAGGCAGAGTTTGCCCATAAGATATACAGAAGTATGATAGAAAAGGACATTATATCTTGCACTGCACTAATTACTGGGTATGCACGAGAAGGTAACTACAGCAGAGATGTGCTAGATCTCTTCAAAGAGATAACTGTTATGAACATGAGACTGGATGGTGTCATATTGTGCTCCATGCTTAATATATGTGCAAATGTTGCTTCATTGATAATGGGAAGACAAATCCATGCACTTATGTTGAAGCACCAACCTTGTCTTGATGTGGCCATGGGAAATGCTCTTGTTGATATGTATGCAAAATGCGGAGAAATTGAAGATGCTAACCATGCTTTTGAGGAGATGGAGGAAAAGAATGTAATTTCATGGACGTCTCTGATTTCTGGATATGGAAGGAATGGCCATGGAGATAAAGCAATTGCATTGTATAAAAGGATGGAACTAGAGGGATTGAAACCTAATGATATCACATTCTTATCTCTTCTCTTTGCTTGTAGCCATACTGGATTGACTAGTGAAGGATGGGAATGCTTCAATACTATGCTTGGCAAATACAACATCTTGCCTCGGTCTGAGCATTTTTCTTGCTTAGTAGATCTTTATGCACGTGCAGGTTTGCTGGAAGATGTGCATAAGTTGATATGTGACATGAACATTAAGCCTGATCCCTCACTTTGGGGAGCTGTTCTTGGGGGATGTAGCACCTATGGTAATAAGTCACTTGGAGAAGTGGCATCAATGCATCTTTGTGATATTGATCCTGAGAATTCAGTTAACTATGTTGTTCTTGGAAGCATCTATGCTGCATCTGGTGCATGGGACAATGCTTTGGAAACACGAGATTTGTTAGAGAAGAGAAGTTTGAAAAAAGAACCAGCGCACAGCCTTTTACATTCCAGAACAAGCAACATATTATTTTTGCAGCCACCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 peroxidase

Protein Analysis

592

Amino Acids

65.73

Weight (kDa)

7.23

Isoelectric Point (pI)

48.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	96 - 143	6.6e-07	PPR repeat family
PPR	PF01535	99 - 129	3.8e-08	PPR repeat
PPR_2	PF13041	198 - 245	6.8e-09	PPR repeat family
PPR_2	PF13041	400 - 448	5.1e-12	PPR repeat family
PPR	PF01535	403 - 433	3.8e-08	PPR repeat
E_motif	PF20431	518 - 577	2.3e-08	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0005777)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G20730
fragaria_vesca	FvH4_3g15060 FvH4_3g15060
malus_domestica	MD05G1227700.v1.1 MD10G1208100.v1.1 MD10G1208200.v1.1
prunus_persica	Prupe.4G134800_v2.0.a1
pyrus_communis	pycom05g20980 pycom05g20990 pycom10g17710
rosa_chinensis	RchiOBHm_Chr5g0024821 RchiOBHm_Chr5g0024861
rosa_laevigata	RLG00000032817
rosa_multiflora	Rmu_co8198802.1_g000001 Rmu_co8370541.1_g000001 Rmu_sc0009744.1_g000006 Rmu_sc0009744.1_g000007
rosa_roxburghii	Rroxscaffold_1G00054560
rosa_rugosa	Rorug05G0084700.1
rosa_samantha	Rh5AG176500 Rh5AG176600 Rh5BG174200 Rh5CG191200 Rh5CG191300 Rh5CG191500 Rh5DG175800 Rh5DG176000
rosa_wichuraiana	Rw5G016000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1220
Acc36I	ACCTGC	1 cut(s)	1448
AccII	CGCG	1 cut(s)	246
AciI	CCGC	3 cut(s)	244, 380, 1152
AclWI	GGATC	4 cut(s)	805, 826, 1505, 1598
AcoI	YGGCCR	4 cut(s)	241, 732, 1113, 1246
AcsI	RAATTY	4 cut(s)	196, 202, 236, 1612
AcvI	CACGTG	1 cut(s)	1454
AcyI	GRCGYC	1 cut(s)	1217
AfiI	CCNNNNNNNGG	1 cut(s)	1521
AhlI	ACTAGT	2 cut(s)	520, 1358
AleI	CACNNNNGTG	1 cut(s)	170
AluBI	AGCT	5 cut(s)	50, 339, 350, 392, 1529
AluI	AGCT	5 cut(s)	50, 339, 350, 392, 1529
Alw21I	GWGCWC	3 cut(s)	259, 520, 1022
Alw26I	GTCTC	3 cut(s)	49, 991, 1224
Alw44I	GTGCAC	1 cut(s)	516
AlwI	GGATC	4 cut(s)	805, 826, 1505, 1598
AoxI	GGCC	4 cut(s)	241, 732, 1113, 1246
ApaLI	GTGCAC	1 cut(s)	516
ApeKI	GCWGC	2 cut(s)	1649, 1768
ApoI	RAATTY	4 cut(s)	196, 202, 236, 1612
AspLEI	GCGC	1 cut(s)	1726
AspS9I	GGNCC	1 cut(s)	303
AsuC2I	CCSGG	1 cut(s)	150
AsuHPI	GGTGA	3 cut(s)	29, 697, 763
AvaII	GGWCC	1 cut(s)	303
BaeGI	GKGCMC	1 cut(s)	520
BaeI	ACNNNNGTAYC	2 cut(s)	455, 488
BalI	TGGCCA	2 cut(s)	1115, 1248
BauI	CACGAG	2 cut(s)	933, 1683
BbrPI	CACGTG	1 cut(s)	1454
BbsI	GAAGAC	1 cut(s)	1072
Bbv12I	GWGCWC	3 cut(s)	259, 520, 1022
BbvI	GCAGC	1 cut(s)	1636
BccI	CCATC	5 cut(s)	734, 998, 1183, 1276, 1362
BcgI	CGANNNNNNTGC	2 cut(s)	250, 284
BclI	TGATCA	2 cut(s)	174, 219
BcnI	CCSGG	1 cut(s)	150
BcoDI	GTCTC	3 cut(s)	49, 991, 1224
BcuI	ACTAGT	2 cut(s)	520, 1358
BfaI	CTAG	4 cut(s)	521, 962, 1289, 1359
BfmI	CTRYAG	1 cut(s)	946
BfuAI	ACCTGC	1 cut(s)	1448
BglII	AGATCT	2 cut(s)	964, 1441
BisI	GCNGC	3 cut(s)	244, 1650, 1769
BlsI	GCNGC	3 cut(s)	245, 1651, 1770
Bme1390I	CCNGG	1 cut(s)	150
Bme18I	GGWCC	1 cut(s)	303
BmgT120I	GGNCC	1 cut(s)	303
BmiI	GGNNCC	1 cut(s)	693
BmrFI	CCNGG	1 cut(s)	150
BmrI	ACTGGG	1 cut(s)	933
BmsI	GCATC	8 cut(s)	135, 547, 793, 1156, 1589, 1597, 1650, 1661
BmuI	ACTGGG	1 cut(s)	933
BpiI	GAAGAC	1 cut(s)	1072
BplI	GAGNNNNNCTC	2 cut(s)	46, 78
BpuMI	CCSGG	1 cut(s)	150
Bsa29I	ATCGAT	1 cut(s)	129
BsaAI	YACGTR	1 cut(s)	1454
BsaBI	GATNNNNATC	1 cut(s)	1602
BsaHI	GRCGYC	1 cut(s)	1217
BsaJI	CCNNGG	3 cut(s)	1116, 1249, 1412
Bsc4I	CCNNNNNNNGG	1 cut(s)	1521
Bse1I	ACTGG	4 cut(s)	436, 928, 1005, 1354
Bse3DI	GCAATG	1 cut(s)	585
Bse8I	GATNNNNATC	1 cut(s)	1602
BseCI	ATCGAT	1 cut(s)	129
BseDI	CCNNGG	3 cut(s)	1116, 1249, 1412
BseGI	GGATG	5 cut(s)	562, 1009, 1287, 1373, 1547
BseJI	GATNNNNATC	1 cut(s)	1602
BseLI	CCNNNNNNNGG	1 cut(s)	1521
BseMI	GCAATG	1 cut(s)	585
BseMII	CTCAG	7 cut(s)	65, 77, 273, 486, 503, 1410, 1599
BseNI	ACTGG	4 cut(s)	436, 928, 1005, 1354
BseRI	GAGGAG	1 cut(s)	1199
BseSI	GKGCMC	1 cut(s)	520
BseXI	GCAGC	1 cut(s)	1636
BsgI	GTGCAG	2 cut(s)	897, 1476
Bsh1236I	CGCG	1 cut(s)	246
BshFI	GGCC	4 cut(s)	243, 734, 1115, 1248
BshVI	ATCGAT	1 cut(s)	129
BsiHKAI	GWGCWC	3 cut(s)	259, 520, 1022
BsiSI	CCGG	2 cut(s)	150, 735
BslFI	GGGAC	2 cut(s)	605, 1679
BslI	CCNNNNNNNGG	1 cut(s)	1521
BsmAI	GTCTC	3 cut(s)	49, 991, 1224
BsmBI	CGTCTC	1 cut(s)	1224
BsmFI	GGGAC	2 cut(s)	605, 1679
BsmI	GAATGC	3 cut(s)	462, 613, 1379
BsnI	GGCC	4 cut(s)	243, 734, 1115, 1248
Bsp1286I	GDGCHC	3 cut(s)	259, 520, 1022
Bsp143I	GATC	9 cut(s)	130, 174, 219, 797, 818, 964, 1441, 1510, 1603
Bsp19I	CCATGG	2 cut(s)	1116, 1249
BspACI	CCGC	3 cut(s)	244, 380, 1152
BspANI	GGCC	4 cut(s)	243, 734, 1115, 1248
BspCNI	CTCAG	7 cut(s)	64, 76, 274, 487, 504, 1411, 1600
BspDI	ATCGAT	1 cut(s)	129
BspFNI	CGCG	1 cut(s)	246
BspLI	GGNNCC	1 cut(s)	693
BspMI	ACCTGC	1 cut(s)	1448
BspPI	GGATC	4 cut(s)	805, 826, 1505, 1598
BsrDI	GCAATG	1 cut(s)	585
BsrI	ACTGG	4 cut(s)	436, 928, 1005, 1354
BssECI	CCNNGG	3 cut(s)	1116, 1249, 1412
BssMI	GATC	9 cut(s)	130, 174, 219, 797, 818, 964, 1441, 1510, 1603
BssNI	GRCGYC	1 cut(s)	1217
BssSI	CACGAG	2 cut(s)	933, 1683
BssT1I	CCWWGG	2 cut(s)	1116, 1249
Bst2BI	CACGAG	2 cut(s)	933, 1683
Bst4CI	ACNGT	1 cut(s)	985
Bst6I	CTCTTC	3 cut(s)	974, 1332, 1694
BstACI	GRCGYC	1 cut(s)	1217
BstAPI	GCANNNNNTGC	3 cut(s)	860, 1046, 1658
BstBAI	YACGTR	1 cut(s)	1454
BstC8I	GCNNGC	4 cut(s)	18, 259, 427, 562
BstDEI	CTNAG	9 cut(s)	51, 63, 82, 282, 495, 512, 1419, 1435, 1608
BstDSI	CCRYGG	2 cut(s)	1116, 1249
BstF5I	GGATG	5 cut(s)	562, 1009, 1287, 1373, 1547
BstFNI	CGCG	1 cut(s)	246
BstHHI	GCGC	1 cut(s)	1726
BstKTI	GATC	9 cut(s)	133, 177, 222, 800, 821, 967, 1444, 1513, 1606
BstMAI	GTCTC	3 cut(s)	49, 991, 1224
BstMBI	GATC	9 cut(s)	130, 174, 219, 797, 818, 964, 1441, 1510, 1603
BstMWI	GCNNNNNNNGC	6 cut(s)	240, 422, 860, 1046, 1175, 1658
BstNSI	RCATGY	1 cut(s)	429
BstSCI	CCNGG	1 cut(s)	148
BstSFI	CTRYAG	1 cut(s)	946
BstSLI	GKGCMC	1 cut(s)	520
BstUI	CGCG	1 cut(s)	246
BstV1I	GCAGC	1 cut(s)	1636
BstV2I	GAAGAC	1 cut(s)	1072
BstX2I	RGATCY	2 cut(s)	964, 1441
BstYI	RGATCY	2 cut(s)	964, 1441
Bsu15I	ATCGAT	1 cut(s)	129
BsuRI	GGCC	4 cut(s)	243, 734, 1115, 1248
BsuTUI	ATCGAT	1 cut(s)	129
BtgI	CCRYGG	2 cut(s)	1116, 1249
BtsCI	GGATG	5 cut(s)	562, 1009, 1287, 1373, 1547
BtsI	GCAGTG	1 cut(s)	909
BtsIMutI	CAGTG	3 cut(s)	429, 766, 909
BveI	ACCTGC	1 cut(s)	1448
Cac8I	GCNNGC	4 cut(s)	18, 259, 427, 562
CfoI	GCGC	1 cut(s)	1726
Cfr13I	GGNCC	1 cut(s)	303
ClaI	ATCGAT	1 cut(s)	129
CseI	GACGC	1 cut(s)	362
CspCI	CAANNNNNGTGG	2 cut(s)	5, 40
DdeI	CTNAG	9 cut(s)	51, 63, 82, 282, 495, 512, 1419, 1435, 1608
DpnI	GATC	9 cut(s)	132, 176, 221, 799, 820, 966, 1443, 1512, 1605
DpnII	GATC	9 cut(s)	130, 174, 219, 797, 818, 964, 1441, 1510, 1603
EaeI	YGGCCR	4 cut(s)	241, 732, 1113, 1246
Eam1104I	CTCTTC	3 cut(s)	974, 1332, 1694
EarI	CTCTTC	3 cut(s)	974, 1332, 1694
Eco130I	CCWWGG	2 cut(s)	1116, 1249
Eco32I	GATATC	1 cut(s)	1312
Eco47I	GGWCC	1 cut(s)	303
Eco72I	CACGTG	1 cut(s)	1454
EcoRI	GAATTC	1 cut(s)	1612
EcoRV	GATATC	1 cut(s)	1312
EcoT14I	CCWWGG	2 cut(s)	1116, 1249
EcoT22I	ATGCAT	4 cut(s)	771, 786, 835, 1590
ErhI	CCWWGG	2 cut(s)	1116, 1249
Esp3I	CGTCTC	1 cut(s)	1224
FaqI	GGGAC	2 cut(s)	605, 1679
FauI	CCCGC	1 cut(s)	373
FauNDI	CATATG	1 cut(s)	835
FbaI	TGATCA	2 cut(s)	174, 219
Fnu4HI	GCNGC	3 cut(s)	244, 1650, 1769
FokI	GGATG	5 cut(s)	569, 1016, 1294, 1380, 1554
Fsp4HI	GCNGC	3 cut(s)	244, 1650, 1769
FspBI	CTAG	4 cut(s)	521, 962, 1289, 1359
GlaI	GCGC	1 cut(s)	1725
GluI	GCNGC	3 cut(s)	244, 1650, 1769
HaeIII	GGCC	4 cut(s)	243, 734, 1115, 1248
HapII	CCGG	2 cut(s)	150, 735
HgaI	GACGC	1 cut(s)	362
HhaI	GCGC	1 cut(s)	1726
Hin1I	GRCGYC	1 cut(s)	1217
Hin6I	GCGC	1 cut(s)	1724
HinP1I	GCGC	1 cut(s)	1724
HincII	GTYRAC	1 cut(s)	1621
HindII	GTYRAC	1 cut(s)	1621
HindIII	AAGCTT	1 cut(s)	348
HinfI	GANTC	3 cut(s)	34, 112, 650
HpaI	GTTAAC	1 cut(s)	1621
HpaII	CCGG	2 cut(s)	150, 735
HphI	GGTGA	3 cut(s)	29, 697, 763
Hpy166II	GTNNAC	2 cut(s)	518, 1621
Hpy188I	TCNGA	5 cut(s)	54, 389, 586, 1224, 1420
Hpy188III	TCNNGA	7 cut(s)	44, 695, 712, 1106, 1230, 1607, 1743
Hpy8I	GTNNAC	2 cut(s)	518, 1621
Hpy99I	CGWCG	1 cut(s)	378
HpyAV	CCTTC	9 cut(s)	50, 480, 677, 718, 748, 844, 932, 1233, 1358
HpyCH4III	ACNGT	1 cut(s)	985
HpyCH4IV	ACGT	2 cut(s)	1217, 1453
HpyF10VI	GCNNNNNNNGC	6 cut(s)	240, 422, 860, 1046, 1175, 1658
HpyF3I	CTNAG	9 cut(s)	51, 63, 82, 282, 495, 512, 1419, 1435, 1608
HpySE526I	ACGT	2 cut(s)	1217, 1453
Hsp92I	GRCGYC	1 cut(s)	1217
HspAI	GCGC	1 cut(s)	1724
Ksp22I	TGATCA	2 cut(s)	174, 219
KspAI	GTTAAC	1 cut(s)	1621
Kzo9I	GATC	9 cut(s)	130, 174, 219, 797, 818, 964, 1441, 1510, 1603
LmnI	GCTCC	2 cut(s)	1025, 1526
Lsp1109I	GCAGC	1 cut(s)	1636
LweI	GCATC	8 cut(s)	135, 547, 793, 1156, 1589, 1597, 1650, 1661
MaeI	CTAG	4 cut(s)	521, 962, 1289, 1359
MaeII	ACGT	2 cut(s)	1217, 1453
MaeIII	GTNAC	5 cut(s)	35, 644, 941, 1490, 1563
MalI	GATC	9 cut(s)	132, 176, 221, 799, 820, 966, 1443, 1512, 1605
MboI	GATC	9 cut(s)	130, 174, 219, 797, 818, 964, 1441, 1510, 1603
MboII	GAAGA	7 cut(s)	121, 961, 1077, 1175, 1319, 1481, 1711
MfeI	CAATTG	1 cut(s)	1263
MflI	RGATCY	2 cut(s)	964, 1441
MhlI	GDGCHC	3 cut(s)	259, 520, 1022
MlsI	TGGCCA	2 cut(s)	1115, 1248
MluNI	TGGCCA	2 cut(s)	1115, 1248
MlyI	GAGTC	2 cut(s)	43, 644
MmeI	TCCRAC	1 cut(s)	564
Mox20I	TGGCCA	2 cut(s)	1115, 1248
Mph1103I	ATGCAT	4 cut(s)	771, 786, 835, 1590
MscI	TGGCCA	2 cut(s)	1115, 1248
MseI	TTAA	4 cut(s)	1029, 1503, 1620, 1777
MslI	CAYNNNNRTG	3 cut(s)	168, 170, 1593
Msp20I	TGGCCA	2 cut(s)	1115, 1248
MspI	CCGG	2 cut(s)	150, 735
MspR9I	CCNGG	1 cut(s)	150
MunI	CAATTG	1 cut(s)	1263
Mva1269I	GAATGC	3 cut(s)	462, 613, 1379
MvnI	CGCG	1 cut(s)	246
MwoI	GCNNNNNNNGC	6 cut(s)	240, 422, 860, 1046, 1175, 1658
NciI	CCSGG	1 cut(s)	150
NcoI	CCATGG	2 cut(s)	1116, 1249
NdeI	CATATG	1 cut(s)	835
NdeII	GATC	9 cut(s)	130, 174, 219, 797, 818, 964, 1441, 1510, 1603
NlaIV	GGNNCC	1 cut(s)	693
NmuCI	GTSAC	4 cut(s)	35, 644, 1490, 1563
NsiI	ATGCAT	4 cut(s)	771, 786, 835, 1590
NspI	RCATGY	1 cut(s)	429
OliI	CACNNNNGTG	1 cut(s)	170
PaeI	GCATGC	1 cut(s)	429
PctI	GAATGC	3 cut(s)	462, 613, 1379
PfeI	GAWTC	1 cut(s)	112
PflFI	GACNNNGTC	1 cut(s)	150
PkrI	GCNGC	3 cut(s)	245, 1651, 1770
PleI	GAGTC	2 cut(s)	42, 644
PmaCI	CACGTG	1 cut(s)	1454
PmlI	CACGTG	1 cut(s)	1454
PpsI	GAGTC	2 cut(s)	42, 644
Ppu21I	YACGTR	1 cut(s)	1454
PspCI	CACGTG	1 cut(s)	1454
PspN4I	GGNNCC	1 cut(s)	693
PspPI	GGNCC	1 cut(s)	303
PsuI	RGATCY	2 cut(s)	964, 1441
PsyI	GACNNNGTC	1 cut(s)	150
RseI	CAYNNNNRTG	3 cut(s)	168, 170, 1593
SaqAI	TTAA	4 cut(s)	1029, 1503, 1620, 1777
SatI	GCNGC	3 cut(s)	244, 1650, 1769
Sau3AI	GATC	9 cut(s)	130, 174, 219, 797, 818, 964, 1441, 1510, 1603
Sau96I	GGNCC	1 cut(s)	303
SchI	GAGTC	2 cut(s)	43, 644
ScrFI	CCNGG	1 cut(s)	150
SduI	GDGCHC	3 cut(s)	259, 520, 1022
SfaNI	GCATC	8 cut(s)	135, 547, 793, 1156, 1589, 1597, 1650, 1661
SfcI	CTRYAG	1 cut(s)	946
SinI	GGWCC	1 cut(s)	303
SmiMI	CAYNNNNRTG	3 cut(s)	168, 170, 1593
SpeI	ACTAGT	2 cut(s)	520, 1358
SphI	GCATGC	1 cut(s)	429
SsiI	CCGC	3 cut(s)	244, 380, 1152
SspMI	CTAG	4 cut(s)	521, 962, 1289, 1359
StyD4I	CCNGG	1 cut(s)	148
StyI	CCWWGG	2 cut(s)	1116, 1249
TaaI	ACNGT	1 cut(s)	985
TaiI	ACGT	2 cut(s)	1220, 1456
TaqI	TCGA	3 cut(s)	129, 270, 573
TaqII	GACCGA	2 cut(s)	657, 1404
TauI	GCSGC	1 cut(s)	246
TfiI	GAWTC	1 cut(s)	112
Tru1I	TTAA	4 cut(s)	1029, 1503, 1620, 1777
Tru9I	TTAA	4 cut(s)	1029, 1503, 1620, 1777
TscAI	CASTG	3 cut(s)	436, 766, 916
TseFI	GTSAC	4 cut(s)	35, 644, 1490, 1563
TseI	GCWGC	2 cut(s)	1649, 1768
Tsp45I	GTSAC	4 cut(s)	35, 644, 1490, 1563
TspDTI	ATGAA	6 cut(s)	122, 521, 1004, 1041, 1200, 1511
TspRI	CASTG	3 cut(s)	436, 766, 916
Tth111I	GACNNNGTC	1 cut(s)	150
VneI	GTGCAC	1 cut(s)	516
VpaK11BI	GGWCC	1 cut(s)	303
XapI	RAATTY	4 cut(s)	196, 202, 236, 1612
XceI	RCATGY	1 cut(s)	429
XspI	CTAG	4 cut(s)	521, 962, 1289, 1359
ZraI	GACGTC	1 cut(s)	1218
Zsp2I	ATGCAT	4 cut(s)	771, 786, 835, 1590

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.