Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0005777

Physical Location & Seq

Genomic Coordinates Forward (+)

36166377 .. 36169333

Gene Structure 2957 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1227700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1764 bp

ATGCAAGCCTTGTGCAAAAGGGGCCAACTTCAACAAGCTCTCAGACTCCTCTCCAACCCAACCCAAATAAACTCTTATTATTCACTGTATATGAATATCTTGCAGCTGTGCATCGACGAACGAGCAGAAAGGGCCGGTCTTTTGGTTCACAGCCATGTAATTACAAATGGGTTTGGTTCAAATTTGAATTTATATACTAAGCTGATAATCTTTTACTGCAACTTTGGTCGCATGGTTAGTGCCCGCAATGTGTTTGATAGAATGCGTGAGAGAAATGTCGTGTCTTGGACTGCTATGATTTCTGGGTATGTTAAAGGTGGGTGTTATAAGGATGGTTTAATGGTGTTTCTGAGTATGCGTCAGGCAGGTTTTAGAGCTAATCAGTTTGGGTATGGGAGCGCGTTGAGGGCGTGTACGGGTTTGAGGTGTTTGGAAGTAGGGCAGCAGATACAAGGGTGTATTGTGAAAGGGAGGTTTGCTGAGAACTTGTTTGTGCAGAGTGCGTTGGTTGATTTTTATTCTAAGTGTGGGAAGATAGAGGATGCACGTTATTTGTTTGAGGAAATGAAGGTGAGGGACTTGGTTTCGTGGAATGCTATGATTGGCGGCTATGGTGTTCAGGGTTTTGCTGATGACTCATTGCGTATGTTTCATTCGATGATGAAGGAAGGCATGATCCCTGATTGCTTCAGCTTTGTAAGTGTGTTGAGAGCCTTAACTGGAGATAGTGGTAGCATGAAGGTGAGTCAAATACATGGATTCATCATGCAACTGGATTTTGGATCACACGAGGCTATAAGTGGATCGCTAATCAATGCATATGCAAAATGTGGAAGGGTAAAGAGAGCTCATCAGATATACAAGAGCATGATAAAAAAGGACATTATATCATGCACGGCATTGATAAGTGGATATGCACGAGAAGGTAACTACAGCAGAGATGTGCTAGCTCTCCTTAAAGAAGTGAATCTTATGCGCATGGCACTGGATGGTATGATATTATGCTCCATGCTTAATATATGCGCGAATATTTCTTCATTGATCTTGGGAAGACAAATTCATGTCCTTACTTTTAAACACCAACCTTGTCATGATGTGGCCGTGGGAAATGCTCTTGTTGACATGTATGCAAAATGCGGAGAAATTGAAGATGCTAACCATGCTTTTGATGAGATGAAGGAAAAGAATGTTATTTCATGGACATCGCTGATTTCTGGATATGGAAGGAATGGCTTGGGACATAAGGCGATTGCTTTATATAAAATGATGGAATATGAGGGATTGGAACCTAATGATATCACGTTCCTGTCTCTTCTCTTTGCTTGTAGCCATGCTGGACTGACAGTTGAAGGATGGGAATGCTTTAATACTATGCTTAAAAAGTACAACATCTTGCCTCGAGTTGAGCATTTTTCTTGCATGGTAGACCTTTATGCACGCGCAGGTTTGTTAGACGAAGCTTACAAGTTGATGTGTGACATGAACATAAAGCCTAATTCCTCACTCTGGGGAGCCATTCTTGGGGGGTGTAGCGTCCATGGTAATAGCTCACTTGGAGAAGTGGCGGCAATGCATCTTCGTGATATGGATCCAAAGAATTCAGTTAACTTTGTTGTCCTAGGAAGCATATATGCTGCATCTGGTGCATGGGACAATGCTTTGGAAACGCGAAATTTGATAGAGAGGAGAAGTTTGAAAAAAGAACCAGCACAGAGCGTTTTAGTTTCCACAACAAATAAAACTGTGCTTTTGCAGCCAACTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 peroxidase

Protein Analysis

588

Amino Acids

65.4

Weight (kDa)

8.62

Isoelectric Point (pI)

37.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	91 - 138	1.1e-06	PPR repeat family
PPR	PF01535	94 - 124	2e-06	PPR repeat
PPR_2	PF13041	193 - 239	2.6e-07	PPR repeat family
PPR	PF01535	195 - 224	6.2e-06	PPR repeat
PPR_2	PF13041	395 - 443	8.6e-11	PPR repeat family
PPR	PF01535	398 - 428	1.7e-07	PPR repeat
E_motif	PF20431	513 - 572	1.2e-07	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005777)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G20730
fragaria_vesca	FvH4_3g15060 FvH4_3g15060
malus_domestica	MD05G1227700.v1.1 MD10G1208100.v1.1 MD10G1208200.v1.1
prunus_persica	Prupe.4G134800_v2.0.a1
pyrus_communis	pycom05g20980 pycom05g20990 pycom10g17710
rosa_chinensis	RchiOBHm_Chr5g0024821 RchiOBHm_Chr5g0024861
rosa_laevigata	RLG00000032817
rosa_multiflora	Rmu_co8198802.1_g000001 Rmu_co8370541.1_g000001 Rmu_sc0009744.1_g000006 Rmu_sc0009744.1_g000007
rosa_roxburghii	Rroxscaffold_1G00054560
rosa_rugosa	Rorug05G0084700.1
rosa_samantha	Rh5AG176500 Rh5AG176600 Rh5BG174200 Rh5CG191200 Rh5CG191300 Rh5CG191500 Rh5DG175800 Rh5DG176000
rosa_wichuraiana	Rw5G016000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	327
Acc16I	TGCGCA	1 cut(s)	977
Acc36I	ACCTGC	2 cut(s)	356, 1433
AccI	GTMKAC	1 cut(s)	1425
AccII	CGCG	4 cut(s)	401, 1025, 1440, 1669
AciI	CCGC	4 cut(s)	244, 606, 1137, 1565
AclWI	GGATC	5 cut(s)	670, 790, 811, 1583, 1596
AcoI	YGGCCR	1 cut(s)	1098
AcsI	RAATTY	5 cut(s)	181, 187, 1056, 1597, 1672
AcuI	CTGAAG	1 cut(s)	673
AfaI	GTAC	2 cut(s)	415, 1385
AfiI	CCNNNNNNNGG	2 cut(s)	1506, 1521
AflIII	ACRYGT	1 cut(s)	1122
AgsI	TTSAA	6 cut(s)	32, 180, 187, 1148, 1349, 1696
AluBI	AGCT	9 cut(s)	38, 106, 202, 377, 693, 848, 950, 1460, 1548
AluI	AGCT	9 cut(s)	38, 106, 202, 377, 693, 848, 950, 1460, 1548
Alw21I	GWGCWC	1 cut(s)	850
Alw26I	GTCTC	1 cut(s)	1314
AlwI	GGATC	5 cut(s)	670, 790, 811, 1583, 1596
Ama87I	CYCGRG	1 cut(s)	1398
AoxI	GGCC	3 cut(s)	22, 132, 1098
ApeKI	GCWGC	4 cut(s)	103, 442, 1634, 1753
ApoI	RAATTY	5 cut(s)	181, 187, 1056, 1597, 1672
AspA2I	CCTAGG	1 cut(s)	1618
AspLEI	GCGC	4 cut(s)	401, 978, 1025, 1442
AspS9I	GGNCC	2 cut(s)	22, 132
AsuHPI	GGTGA	2 cut(s)	583, 754
AsuNHI	GCTAGC	1 cut(s)	946
AvaI	CYCGRG	1 cut(s)	1398
AvrII	CCTAGG	1 cut(s)	1618
BaeGI	GKGCMC	1 cut(s)	244
BaeI	ACNNNNGTAYC	2 cut(s)	440, 473
BamHI	GGATCC	1 cut(s)	1588
BanII	GRGCYC	1 cut(s)	850
BauI	CACGAG	2 cut(s)	788, 918
BbsI	GAAGAC	1 cut(s)	1057
Bbv12I	GWGCWC	1 cut(s)	850
BbvI	GCAGC	3 cut(s)	115, 454, 1621
BccI	CCATC	4 cut(s)	326, 983, 1261, 1347
BceAI	ACGGC	2 cut(s)	912, 1085
BcoDI	GTCTC	1 cut(s)	1314
BfaI	CTAG	2 cut(s)	947, 1619
BfmI	CTRYAG	1 cut(s)	931
BfuAI	ACCTGC	2 cut(s)	356, 1433
BisI	GCNGC	6 cut(s)	104, 443, 607, 1566, 1635, 1754
BlnI	CCTAGG	1 cut(s)	1618
BlsI	GCNGC	6 cut(s)	105, 444, 608, 1567, 1636, 1755
BmeT110I	CYCGRG	1 cut(s)	1398
BmgT120I	GGNCC	2 cut(s)	22, 132
BmiI	GGNNCC	4 cut(s)	23, 1287, 1513, 1590
BmsI	GCATC	5 cut(s)	120, 532, 1141, 1582, 1646
BmtI	GCTAGC	1 cut(s)	950
BpiI	GAAGAC	1 cut(s)	1057
BpmI	CTGGAG	1 cut(s)	741
BsaBI	GATNNNNATC	1 cut(s)	1587
BsaJI	CCNNGG	3 cut(s)	1101, 1537, 1618
Bsc4I	CCNNNNNNNGG	2 cut(s)	1506, 1521
Bse118I	RCCGGY	1 cut(s)	134
Bse1I	ACTGG	3 cut(s)	724, 777, 990
Bse3DI	GCAATG	3 cut(s)	253, 638, 1575
Bse8I	GATNNNNATC	1 cut(s)	1587
BseDI	CCNNGG	3 cut(s)	1101, 1537, 1618
BseGI	GGATG	4 cut(s)	337, 547, 994, 1358
BseJI	GATNNNNATC	1 cut(s)	1587
BseLI	CCNNNNNNNGG	2 cut(s)	1506, 1521
BseMI	GCAATG	3 cut(s)	253, 638, 1575
BseMII	CTCAG	3 cut(s)	55, 341, 471
BseNI	ACTGG	3 cut(s)	724, 777, 990
BseRI	GAGGAG	2 cut(s)	38, 1699
BseSI	GKGCMC	1 cut(s)	244
BseXI	GCAGC	3 cut(s)	115, 454, 1621
BsgI	GTGCAG	1 cut(s)	515
Bsh1236I	CGCG	4 cut(s)	401, 1025, 1440, 1669
BshFI	GGCC	3 cut(s)	24, 134, 1100
BsiHKAI	GWGCWC	1 cut(s)	850
BsiHKCI	CYCGRG	1 cut(s)	1398
BsiSI	CCGG	1 cut(s)	135
BslFI	GGGAC	3 cut(s)	590, 1251, 1664
BslI	CCNNNNNNNGG	2 cut(s)	1506, 1521
BsmAI	GTCTC	1 cut(s)	1314
BsmFI	GGGAC	3 cut(s)	590, 1251, 1664
BsmI	GAATGC	3 cut(s)	267, 598, 1364
BsnI	GGCC	3 cut(s)	24, 134, 1100
BsoBI	CYCGRG	1 cut(s)	1398
Bsp1286I	GDGCHC	2 cut(s)	244, 850
Bsp143I	GATC	5 cut(s)	675, 782, 803, 1041, 1588
Bsp19I	CCATGG	1 cut(s)	1537
BspACI	CCGC	4 cut(s)	244, 606, 1137, 1565
BspANI	GGCC	3 cut(s)	24, 134, 1100
BspCNI	CTCAG	3 cut(s)	54, 342, 472
BspFNI	CGCG	4 cut(s)	401, 1025, 1440, 1669
BspHI	TCATGA	1 cut(s)	1090
BspLI	GGNNCC	4 cut(s)	23, 1287, 1513, 1590
BspMI	ACCTGC	2 cut(s)	356, 1433
BspOI	GCTAGC	1 cut(s)	950
BspPI	GGATC	5 cut(s)	670, 790, 811, 1583, 1596
BsrDI	GCAATG	3 cut(s)	253, 638, 1575
BsrFI	RCCGGY	1 cut(s)	134
BsrI	ACTGG	3 cut(s)	724, 777, 990
BssAI	RCCGGY	1 cut(s)	134
BssECI	CCNNGG	3 cut(s)	1101, 1537, 1618
BssMI	GATC	5 cut(s)	675, 782, 803, 1041, 1588
BssSI	CACGAG	2 cut(s)	788, 918
BssT1I	CCWWGG	2 cut(s)	1537, 1618
Bst2BI	CACGAG	2 cut(s)	788, 918
Bst4CI	ACNGT	3 cut(s)	87, 1345, 1744
Bst6I	CTCTTC	1 cut(s)	1317
BstAPI	GCANNNNNTGC	1 cut(s)	1643
BstC8I	GCNNGC	4 cut(s)	6, 244, 948, 1438
BstDEI	CTNAG	5 cut(s)	41, 198, 350, 480, 522
BstDSI	CCRYGG	2 cut(s)	1101, 1537
BstF5I	GGATG	4 cut(s)	337, 547, 994, 1358
BstFNI	CGCG	4 cut(s)	401, 1025, 1440, 1669
BstHHI	GCGC	4 cut(s)	401, 978, 1025, 1442
BstKTI	GATC	5 cut(s)	678, 785, 806, 1044, 1591
BstMAI	GTCTC	1 cut(s)	1314
BstMBI	GATC	5 cut(s)	675, 782, 803, 1041, 1588
BstMWI	GCNNNNNNNGC	6 cut(s)	21, 131, 407, 1160, 1643, 1753
BstNSI	RCATGY	1 cut(s)	1126
BstSFI	CTRYAG	1 cut(s)	931
BstSLI	GKGCMC	1 cut(s)	244
BstUI	CGCG	4 cut(s)	401, 1025, 1440, 1669
BstV1I	GCAGC	3 cut(s)	115, 454, 1621
BstV2I	GAAGAC	1 cut(s)	1057
BstX2I	RGATCY	1 cut(s)	1588
BstYI	RGATCY	1 cut(s)	1588
BsuRI	GGCC	3 cut(s)	24, 134, 1100
BtgI	CCRYGG	2 cut(s)	1101, 1537
BtgZI	GCGATG	1 cut(s)	1188
BtsCI	GGATG	4 cut(s)	337, 547, 994, 1358
BtsIMutI	CAGTG	2 cut(s)	83, 983
BveI	ACCTGC	2 cut(s)	356, 1433
Cac8I	GCNNGC	4 cut(s)	6, 244, 948, 1438
CciI	TCATGA	1 cut(s)	1090
CfoI	GCGC	4 cut(s)	401, 978, 1025, 1442
Cfr10I	RCCGGY	1 cut(s)	134
Cfr13I	GGNCC	2 cut(s)	22, 132
CseI	GACGC	2 cut(s)	347, 1522
Csp6I	GTAC	2 cut(s)	414, 1384
CviQI	GTAC	2 cut(s)	414, 1384
DdeI	CTNAG	5 cut(s)	41, 198, 350, 480, 522
DpnI	GATC	5 cut(s)	677, 784, 805, 1043, 1590
DpnII	GATC	5 cut(s)	675, 782, 803, 1041, 1588
DraI	TTTAAA	1 cut(s)	1075
EaeI	YGGCCR	1 cut(s)	1098
Eam1104I	CTCTTC	1 cut(s)	1317
EarI	CTCTTC	1 cut(s)	1317
Ecl136II	GAGCTC	1 cut(s)	848
Eco130I	CCWWGG	2 cut(s)	1537, 1618
Eco24I	GRGCYC	1 cut(s)	850
Eco32I	GATATC	1 cut(s)	1297
Eco53kI	GAGCTC	1 cut(s)	848
Eco57I	CTGAAG	1 cut(s)	673
Eco88I	CYCGRG	1 cut(s)	1398
EcoICRI	GAGCTC	1 cut(s)	848
EcoRI	GAATTC	1 cut(s)	1597
EcoRV	GATATC	1 cut(s)	1297
EcoT14I	CCWWGG	2 cut(s)	1537, 1618
EcoT22I	ATGCAT	2 cut(s)	820, 1575
EcoT38I	GRGCYC	1 cut(s)	850
ErhI	CCWWGG	2 cut(s)	1537, 1618
FalI	AAGNNNNNCTT	2 cut(s)	954, 986
FaqI	GGGAC	3 cut(s)	590, 1251, 1664
FauI	CCCGC	1 cut(s)	251
FauNDI	CATATG	1 cut(s)	820
FblI	GTMKAC	1 cut(s)	1425
Fnu4HI	GCNGC	6 cut(s)	104, 443, 607, 1566, 1635, 1754
FokI	GGATG	4 cut(s)	344, 554, 1001, 1365
FriOI	GRGCYC	1 cut(s)	850
Fsp4HI	GCNGC	6 cut(s)	104, 443, 607, 1566, 1635, 1754
FspAI	RTGCGCAY	1 cut(s)	977
FspBI	CTAG	2 cut(s)	947, 1619
FspI	TGCGCA	1 cut(s)	977
GlaI	GCGC	4 cut(s)	400, 977, 1024, 1441
GluI	GCNGC	6 cut(s)	104, 443, 607, 1566, 1635, 1754
GsuI	CTGGAG	1 cut(s)	741
HaeIII	GGCC	3 cut(s)	24, 134, 1100
HapII	CCGG	1 cut(s)	135
HgaI	GACGC	2 cut(s)	347, 1522
HhaI	GCGC	4 cut(s)	401, 978, 1025, 1442
Hin6I	GCGC	4 cut(s)	399, 976, 1023, 1440
HinP1I	GCGC	4 cut(s)	399, 976, 1023, 1440
HincII	GTYRAC	2 cut(s)	1120, 1606
HindII	GTYRAC	2 cut(s)	1120, 1606
HindIII	AAGCTT	1 cut(s)	1458
HinfI	GANTC	5 cut(s)	45, 635, 745, 759, 967
HpaI	GTTAAC	1 cut(s)	1606
HpaII	CCGG	1 cut(s)	135
HphI	GGTGA	2 cut(s)	583, 754
Hpy166II	GTNNAC	5 cut(s)	148, 414, 1120, 1426, 1606
Hpy188I	TCNGA	3 cut(s)	44, 351, 855
Hpy188III	TCNNGA	3 cut(s)	1091, 1215, 1580
Hpy8I	GTNNAC	5 cut(s)	148, 414, 1120, 1426, 1606
Hpy99I	CGWCG	1 cut(s)	119
HpyAV	CCTTC	9 cut(s)	562, 658, 662, 733, 828, 917, 1171, 1218, 1343
HpyCH4III	ACNGT	3 cut(s)	87, 1345, 1744
HpyCH4IV	ACGT	2 cut(s)	547, 1301
HpyF10VI	GCNNNNNNNGC	6 cut(s)	21, 131, 407, 1160, 1643, 1753
HpyF3I	CTNAG	5 cut(s)	41, 198, 350, 480, 522
HpySE526I	ACGT	2 cut(s)	547, 1301
HspAI	GCGC	4 cut(s)	399, 976, 1023, 1440
KspAI	GTTAAC	1 cut(s)	1606
Kzo9I	GATC	5 cut(s)	675, 782, 803, 1041, 1588
LmnI	GCTCC	3 cut(s)	396, 1010, 1511
Lsp1109I	GCAGC	3 cut(s)	115, 454, 1621
LweI	GCATC	5 cut(s)	120, 532, 1141, 1582, 1646
MaeI	CTAG	2 cut(s)	947, 1619
MaeII	ACGT	2 cut(s)	547, 1301
MaeIII	GTNAC	2 cut(s)	926, 1475
MalI	GATC	5 cut(s)	677, 784, 805, 1043, 1590
MboI	GATC	5 cut(s)	675, 782, 803, 1041, 1588
MboII	GAAGA	6 cut(s)	544, 1026, 1062, 1160, 1304, 1568
MflI	RGATCY	1 cut(s)	1588
MhlI	GDGCHC	2 cut(s)	244, 850
MluCI	AATT	8 cut(s)	159, 181, 187, 1056, 1143, 1495, 1597, 1672
MlyI	GAGTC	3 cut(s)	39, 629, 754
MmeI	TCCRAC	1 cut(s)	78
Mph1103I	ATGCAT	2 cut(s)	820, 1575
MslI	CAYNNNNRTG	3 cut(s)	153, 740, 1578
MspA1I	CMGCKG	1 cut(s)	106
MspI	CCGG	1 cut(s)	135
Mva1269I	GAATGC	3 cut(s)	267, 598, 1364
MvnI	CGCG	4 cut(s)	401, 1025, 1440, 1669
MwoI	GCNNNNNNNGC	6 cut(s)	21, 131, 407, 1160, 1643, 1753
NcoI	CCATGG	1 cut(s)	1537
NdeI	CATATG	1 cut(s)	820
NdeII	GATC	5 cut(s)	675, 782, 803, 1041, 1588
NheI	GCTAGC	1 cut(s)	946
NlaIV	GGNNCC	4 cut(s)	23, 1287, 1513, 1590
NmuCI	GTSAC	1 cut(s)	1475
NsbI	TGCGCA	1 cut(s)	977
NsiI	ATGCAT	2 cut(s)	820, 1575
NspI	RCATGY	1 cut(s)	1126
PaeR7I	CTCGAG	1 cut(s)	1398
PagI	TCATGA	1 cut(s)	1090
PciI	ACATGT	1 cut(s)	1122
PctI	GAATGC	3 cut(s)	267, 598, 1364
PfeI	GAWTC	2 cut(s)	759, 967
PkrI	GCNGC	6 cut(s)	105, 444, 608, 1567, 1636, 1755
PleI	GAGTC	3 cut(s)	39, 629, 753
PpsI	GAGTC	3 cut(s)	39, 629, 753
PscI	ACATGT	1 cut(s)	1122
PsiI	TTATAA	1 cut(s)	327
Psp124BI	GAGCTC	1 cut(s)	850
PspN4I	GGNNCC	4 cut(s)	23, 1287, 1513, 1590
PspPI	GGNCC	2 cut(s)	22, 132
PspXI	VCTCGAGB	1 cut(s)	1398
PsuI	RGATCY	1 cut(s)	1588
PvuII	CAGCTG	1 cut(s)	106
RsaI	GTAC	2 cut(s)	415, 1385
RsaNI	GTAC	2 cut(s)	414, 1384
RseI	CAYNNNNRTG	3 cut(s)	153, 740, 1578
SacI	GAGCTC	1 cut(s)	850
SatI	GCNGC	6 cut(s)	104, 443, 607, 1566, 1635, 1754
Sau3AI	GATC	5 cut(s)	675, 782, 803, 1041, 1588
Sau96I	GGNCC	2 cut(s)	22, 132
SchI	GAGTC	3 cut(s)	39, 629, 754
SduI	GDGCHC	2 cut(s)	244, 850
SfaNI	GCATC	5 cut(s)	120, 532, 1141, 1582, 1646
SfcI	CTRYAG	1 cut(s)	931
Sfr274I	CTCGAG	1 cut(s)	1398
SlaI	CTCGAG	1 cut(s)	1398
SmiMI	CAYNNNNRTG	3 cut(s)	153, 740, 1578
SmlI	CTYRAG	1 cut(s)	1398
SmoI	CTYRAG	1 cut(s)	1398
Sse9I	AATT	8 cut(s)	159, 181, 187, 1056, 1143, 1495, 1597, 1672
SsiI	CCGC	4 cut(s)	244, 606, 1137, 1565
SspI	AATATT	1 cut(s)	1030
SspMI	CTAG	2 cut(s)	947, 1619
SstI	GAGCTC	1 cut(s)	850
StyI	CCWWGG	2 cut(s)	1537, 1618
TaaI	ACNGT	3 cut(s)	87, 1345, 1744
TaiI	ACGT	2 cut(s)	550, 1304
TaqI	TCGA	3 cut(s)	114, 656, 1399
TasI	AATT	8 cut(s)	159, 181, 187, 1056, 1143, 1495, 1597, 1672
TatI	WGTACW	1 cut(s)	1383
TauI	GCSGC	2 cut(s)	609, 1568
TfiI	GAWTC	2 cut(s)	759, 967
TscAI	CASTG	2 cut(s)	90, 990
TseFI	GTSAC	1 cut(s)	1475
TseI	GCWGC	4 cut(s)	103, 442, 1634, 1753
Tsp45I	GTSAC	1 cut(s)	1475
TspRI	CASTG	2 cut(s)	90, 990
XapI	RAATTY	5 cut(s)	181, 187, 1056, 1597, 1672
XceI	RCATGY	1 cut(s)	1126
XhoI	CTCGAG	1 cut(s)	1398
XmaJI	CCTAGG	1 cut(s)	1618
XmiI	GTMKAC	1 cut(s)	1425
XspI	CTAG	2 cut(s)	947, 1619
Zsp2I	ATGCAT	2 cut(s)	820, 1575

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.