FvH4_3g17450

Cytochrome p450

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Reverse (-)
11109517 .. 11112605
3089 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g17450.t1

Sequence Viewer

Length: 1548 bp
ATGGCTATGGCTCTATCACCATGGTTGAATCAACTGGGGCAAGAGCTACAAAGAATCACCATTCCTTCCTATCTTTTCTTGGTTTCTCTTCTGTCGCTTTCCATATTCTTTTTGCTTTCATTTTCCAGATCAGGTTCGAAATTCAAGTTACCACCATCTCCAACAAGATTACCACTGATTGGAAACCTTCACCAGCTAGGCACACTCCCACACCGCTCTCTTGGCACTCTGTCTAAGAAGCATGGCCCTCTAATGCTACTTCACTTGGGACAAGTTCCAACACTAGTAGTTTCATCAGCAGAAATGGCCAAGGAAGTCATGAAGACCCATGATACTGTTTTCTCCAGCCGTCCCAAAACTACAGCTGCAAACATATTAGCCTATGGATGTTATGACATTGGCTTCGCTCCTTATGGGGAGTACTGGAGACAAGTTCGGAAACTTTGTGTTCTCGAACTTCTCAGCCTCAAAAGGGTGCAACAATTTCAGTATGCAAGGGAAGAAGAGATTGGGGTGTTGGTAAATAGAATACGAAAAGCGTGCCTCGGCCAGTCTCCTATTAATCTAAGTGAGATGCTGATAAAAGCCTCCAACAACATAATGTCTAGGTGCGTTCTTGGACAGAATTTTGTGGAACAAAATGGTAGTTGGTTTGGAGAGTTGGCAAGAACGTTGATGACTCAAATAATGGGTTTCAGCTTGGGAGATTTCTTCCCTTCTTTGAGTTGGATTGATAGTCTTACAGGACTAATTGCACGGCTGAATAAAACCTTTGTCGAGGTGGATGGATTCCTTGATCAGTTAATTGAAGAGCATAAGACAGCAAATAGAGAAGTTGAATCCAAGGACTTCGTAGATATTCTCCTCCAGCTTCAAAAGGATAGCAGCCCTGAATTCGAGCTTACTCGAGACAACCTGAAGGCCATCTTAGTGGACATGCTCATTGGTGGAAGTGATACTACTTCAACAGCGTTGGAATGGTTGATGGCAGAGCTGATGAGAAATCGAAGTGTAATGGCCAAACTCCAAGAGGAAGTTAGAAGGGTGGTGGGGAAGAAGGCAAGGGTGGATGTGAGTGATCTCGAACAAATGGACTACTTAAAATGTGTCATTAAAGAAGCTCTAAGACTACATCCTCCAGCTCCTCTATTAGTTCCAAGAGAAACAATTGCAGCTGTGGAACTGGGAGGTTATTATATCCCAGCGAAAACAAGCGTCTTTGTGAATGCATTCGCAATCCAAAGGGACCCCGAATTCTGGGACAGACCAGAGGATTTCCTTCCGGAACGATTTGAGGGCAATTCAGTTGATTTCAGGAGCCAGGACTTCCAGTTCATCGCATTTGGTGGTGGGAGAAGGGGGTGTCCAGGAGTGAACTTTGCGGTTGCTGCAGCTGAATATGAGCTTGCAAACCTTATGTATTGGTTTGATTGGAAACTGCCTAGTGGTAGTGCACTGGCCGAGACCTTGGACATGACAGAAGTTTATGGGCTCACTGTCCATAAAAAATGTCCTCTTCAAGTTGTGTCTGTATTATACTCCCCATGA

Protein Analysis

516

Amino Acids

57.96

Weight (kDa)

6.49

Isoelectric Point (pI)

45.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 51 - 490 2e-102 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 179
AccBSI CCGCTC 1 cut(s) 216
AccIII TCCGGA 1 cut(s) 1282
AciI CCGC 2 cut(s) 214, 1382
AclI AACGTT 1 cut(s) 671
AcoI YGGCCR 4 cut(s) 306, 547, 1017, 1458
AcsI RAATTY 4 cut(s) 140, 625, 893, 1253
AcuI CTGAAG 1 cut(s) 938
AfaI GTAC 1 cut(s) 422
AfiI CCNNNNNNNGG 3 cut(s) 179, 472, 1257
AgsI TTSAA 7 cut(s) 28, 145, 809, 839, 875, 966, 1520
AhlI ACTAGT 1 cut(s) 283
AjnI CCWGG 2 cut(s) 1320, 1366
AjuI GAANNNNNNNTTGG 2 cut(s) 492, 524
AloI GAACNNNNNNTCC 2 cut(s) 1316, 1348
Alw21I GWGCWC 1 cut(s) 1456
Alw26I GTCTC 4 cut(s) 421, 558, 903, 1457
Alw44I GTGCAC 1 cut(s) 1452
Ama87I CYCGRG 1 cut(s) 906
Aor13HI TCCGGA 1 cut(s) 1282
AoxI GGCC 6 cut(s) 244, 306, 547, 921, 1017, 1458
ApaLI GTGCAC 1 cut(s) 1452
ApeKI GCWGC 5 cut(s) 365, 885, 1172, 1388, 1391
ApoI RAATTY 4 cut(s) 140, 625, 893, 1253
ArsI GACNNNNNNTTYG 2 cut(s) 386, 418
AseI ATTAAT 1 cut(s) 561
Asp700I GAANNNNTTC 1 cut(s) 1229
AspS9I GGNCC 2 cut(s) 245, 1246
AsuHPI GGTGA 3 cut(s) 9, 49, 182
AsuII TTCGAA 1 cut(s) 137
AvaI CYCGRG 1 cut(s) 906
AvaII GGWCC 1 cut(s) 1246
BaeGI GKGCMC 1 cut(s) 1456
BalI TGGCCA 2 cut(s) 308, 1019
BanII GRGCYC 1 cut(s) 1494
BarI GAAGNNNNNNTAC 2 cut(s) 943, 975
BbsI GAAGAC 1 cut(s) 329
Bbv12I GWGCWC 1 cut(s) 1456
BbvI GCAGC 5 cut(s) 352, 897, 1184, 1375, 1403
BccI CCATC 4 cut(s) 163, 779, 932, 979
BceAI ACGGC 2 cut(s) 333, 773
BcgI CGANNNNNNTGC 2 cut(s) 522, 556
BciT130I CCWGG 2 cut(s) 1322, 1368
BclI TGATCA 1 cut(s) 796
BcoDI GTCTC 4 cut(s) 421, 558, 903, 1457
BcuI ACTAGT 1 cut(s) 283
BfaI CTAG 4 cut(s) 197, 284, 606, 1443
BfmI CTRYAG 2 cut(s) 360, 1389
BisI GCNGC 5 cut(s) 366, 886, 1173, 1389, 1392
BlsI GCNGC 5 cut(s) 367, 887, 1174, 1390, 1393
BmcAI AGTACT 1 cut(s) 422
Bme1390I CCNGG 2 cut(s) 1322, 1368
Bme18I GGWCC 1 cut(s) 1246
BmeT110I CYCGRG 1 cut(s) 906
BmgT120I GGNCC 2 cut(s) 245, 1246
BmiI GGNNCC 3 cut(s) 1247, 1248, 1319
BmrFI CCNGG 2 cut(s) 1322, 1368
BmrI ACTGGG 2 cut(s) 44, 1193
BmsI GCATC 1 cut(s) 564
BmuI ACTGGG 2 cut(s) 44, 1193
BpiI GAAGAC 1 cut(s) 329
BpmI CTGGAG 4 cut(s) 328, 445, 851, 1122
Bpu14I TTCGAA 1 cut(s) 137
BsaI GGTCTC 1 cut(s) 1457
BsaJI CCNNGG 5 cut(s) 20, 309, 544, 843, 1467
BsaWI WCCGGW 1 cut(s) 1282
Bsc4I CCNNNNNNNGG 3 cut(s) 179, 472, 1257
Bse1I ACTGG 6 cut(s) 39, 428, 550, 1188, 1330, 1461
BseAI TCCGGA 1 cut(s) 1282
BseBI CCWGG 2 cut(s) 1322, 1368
BseDI CCNNGG 5 cut(s) 20, 309, 544, 843, 1467
BseGI GGATG 4 cut(s) 392, 790, 1075, 1132
BseLI CCNNNNNNNGG 3 cut(s) 179, 472, 1257
BseMII CTCAG 1 cut(s) 475
BseNI ACTGG 6 cut(s) 39, 428, 550, 1188, 1330, 1461
BseRI GAGGAG 2 cut(s) 854, 1134
BseSI GKGCMC 1 cut(s) 1456
BseXI GCAGC 5 cut(s) 352, 897, 1184, 1375, 1403
BseYI CCCAGC 1 cut(s) 1201
BshFI GGCC 6 cut(s) 246, 308, 549, 923, 1019, 1460
BsiHKAI GWGCWC 1 cut(s) 1456
BsiHKCI CYCGRG 1 cut(s) 906
BsiSI CCGG 1 cut(s) 1283
BslFI GGGAC 4 cut(s) 282, 336, 1259, 1274
BslI CCNNNNNNNGG 3 cut(s) 179, 472, 1257
BsmAI GTCTC 4 cut(s) 421, 558, 903, 1457
BsmFI GGGAC 4 cut(s) 282, 336, 1259, 1274
BsmI GAATGC 2 cut(s) 1229, 1231
BsnI GGCC 6 cut(s) 246, 308, 549, 923, 1019, 1460
Bso31I GGTCTC 1 cut(s) 1457
BsoBI CYCGRG 1 cut(s) 906
Bsp119I TTCGAA 1 cut(s) 137
Bsp1286I GDGCHC 2 cut(s) 1456, 1494
Bsp13I TCCGGA 1 cut(s) 1282
Bsp143I GATC 3 cut(s) 128, 796, 1078
Bsp19I CCATGG 1 cut(s) 20
BspACI CCGC 2 cut(s) 214, 1382
BspANI GGCC 6 cut(s) 246, 308, 549, 923, 1019, 1460
BspCNI CTCAG 1 cut(s) 474
BspEI TCCGGA 1 cut(s) 1282
BspHI TCATGA 1 cut(s) 318
BspLI GGNNCC 3 cut(s) 1247, 1248, 1319
BspMAI CTGCAG 1 cut(s) 1393
BspQI GCTCTTC 1 cut(s) 804
BspT104I TTCGAA 1 cut(s) 137
BspTNI GGTCTC 1 cut(s) 1457
BsrBI CCGCTC 1 cut(s) 216
BsrI ACTGG 6 cut(s) 39, 428, 550, 1188, 1330, 1461
BssECI CCNNGG 5 cut(s) 20, 309, 544, 843, 1467
BssMI GATC 3 cut(s) 128, 796, 1078
BssT1I CCWWGG 4 cut(s) 20, 309, 843, 1467
Bst2UI CCWGG 2 cut(s) 1322, 1368
Bst4CI ACNGT 2 cut(s) 337, 1498
Bst6I CTCTTC 4 cut(s) 93, 498, 804, 1521
BstBI TTCGAA 1 cut(s) 137
BstC8I GCNNGC 2 cut(s) 541, 1407
BstDEI CTNAG 5 cut(s) 234, 461, 566, 928, 1124
BstDSI CCRYGG 1 cut(s) 20
BstF5I GGATG 4 cut(s) 392, 790, 1075, 1132
BstKTI GATC 3 cut(s) 131, 799, 1081
BstMAI GTCTC 4 cut(s) 421, 558, 903, 1457
BstMBI GATC 3 cut(s) 128, 796, 1078
BstMWI GCNNNNNNNGC 3 cut(s) 222, 305, 1388
BstNI CCWGG 2 cut(s) 1322, 1368
BstNSI RCATGY 1 cut(s) 940
BstSCI CCNGG 2 cut(s) 1320, 1366
BstSFI CTRYAG 2 cut(s) 360, 1389
BstSLI GKGCMC 1 cut(s) 1456
BstV1I GCAGC 5 cut(s) 352, 897, 1184, 1375, 1403
BstV2I GAAGAC 1 cut(s) 329
BstXI CCANNNNNNTGG 1 cut(s) 931
BsuRI GGCC 6 cut(s) 246, 308, 549, 923, 1019, 1460
BtgI CCRYGG 1 cut(s) 20
BtgZI GCGATG 1 cut(s) 1321
BtsCI GGATG 4 cut(s) 392, 790, 1075, 1132
BtsIMutI CAGTG 3 cut(s) 173, 1454, 1494
Cac8I GCNNGC 2 cut(s) 541, 1407
CciI TCATGA 1 cut(s) 318
Cfr13I GGNCC 2 cut(s) 245, 1246
CseI GACGC 1 cut(s) 1204
Csp6I GTAC 1 cut(s) 421
CviAII CATG 7 cut(s) 21, 242, 319, 329, 937, 1474, 1545
CviQI GTAC 1 cut(s) 421
DdeI CTNAG 5 cut(s) 234, 461, 566, 928, 1124
DpnI GATC 3 cut(s) 130, 798, 1080
DpnII GATC 3 cut(s) 128, 796, 1078
EaeI YGGCCR 4 cut(s) 306, 547, 1017, 1458
Eam1104I CTCTTC 4 cut(s) 93, 498, 804, 1521
EarI CTCTTC 4 cut(s) 93, 498, 804, 1521
Eco130I CCWWGG 4 cut(s) 20, 309, 843, 1467
Eco24I GRGCYC 1 cut(s) 1494
Eco31I GGTCTC 1 cut(s) 1457
Eco47I GGWCC 1 cut(s) 1246
Eco57I CTGAAG 1 cut(s) 938
Eco88I CYCGRG 1 cut(s) 906
EcoO109I RGGNCCY 1 cut(s) 1246
EcoRI GAATTC 2 cut(s) 893, 1253
EcoRII CCWGG 2 cut(s) 1320, 1366
EcoT14I CCWWGG 4 cut(s) 20, 309, 843, 1467
EcoT22I ATGCAT 1 cut(s) 1231
EcoT38I GRGCYC 1 cut(s) 1494
ErhI CCWWGG 4 cut(s) 20, 309, 843, 1467
FaeI CATG 7 cut(s) 24, 245, 322, 332, 940, 1477, 1548
FalI AAGNNNNNCTT 2 cut(s) 911, 943
FaqI GGGAC 4 cut(s) 282, 336, 1259, 1274
FatI CATG 7 cut(s) 20, 241, 318, 328, 936, 1473, 1544
FbaI TGATCA 1 cut(s) 796
Fnu4HI GCNGC 5 cut(s) 366, 886, 1173, 1389, 1392
FokI GGATG 4 cut(s) 399, 797, 1082, 1119
FriOI GRGCYC 1 cut(s) 1494
Fsp4HI GCNGC 5 cut(s) 366, 886, 1173, 1389, 1392
FspBI CTAG 4 cut(s) 197, 284, 606, 1443
GluI GCNGC 5 cut(s) 366, 886, 1173, 1389, 1392
GsaI CCCAGC 1 cut(s) 1205
GsuI CTGGAG 4 cut(s) 328, 445, 851, 1122
HaeIII GGCC 6 cut(s) 246, 308, 549, 923, 1019, 1460
HapII CCGG 1 cut(s) 1283
HgaI GACGC 1 cut(s) 1204
Hin1II CATG 7 cut(s) 24, 245, 322, 332, 940, 1477, 1548
HinfI GANTC 5 cut(s) 28, 54, 679, 789, 839
HpaII CCGG 1 cut(s) 1283
HphI GGTGA 3 cut(s) 9, 49, 182
Hpy166II GTNNAC 3 cut(s) 934, 1375, 1454
Hpy188I TCNGA 1 cut(s) 438
Hpy188III TCNNGA 7 cut(s) 126, 319, 452, 908, 1082, 1283, 1315
Hpy8I GTNNAC 3 cut(s) 934, 1375, 1454
HpyAV CCTTC 8 cut(s) 75, 197, 726, 913, 1035, 1051, 1289, 1350
HpyCH4III ACNGT 2 cut(s) 337, 1498
HpyCH4IV ACGT 1 cut(s) 671
HpyCH4V TGCA 9 cut(s) 368, 478, 494, 755, 1172, 1229, 1391, 1409, 1454
HpyF10VI GCNNNNNNNGC 3 cut(s) 222, 305, 1388
HpyF3I CTNAG 5 cut(s) 234, 461, 566, 928, 1124
HpySE526I ACGT 1 cut(s) 671
Hsp92II CATG 7 cut(s) 24, 245, 322, 332, 940, 1477, 1548
KflI GGGWCCC 1 cut(s) 1246
Kpn2I TCCGGA 1 cut(s) 1282
Ksp22I TGATCA 1 cut(s) 796
Kzo9I GATC 3 cut(s) 128, 796, 1078
LguI GCTCTTC 1 cut(s) 804
LmnI GCTCC 3 cut(s) 412, 1147, 1317
Lsp1109I GCAGC 5 cut(s) 352, 897, 1184, 1375, 1403
LweI GCATC 1 cut(s) 564
MaeI CTAG 4 cut(s) 197, 284, 606, 1443
MaeII ACGT 1 cut(s) 671
MaeIII GTNAC 1 cut(s) 147
MalI GATC 3 cut(s) 130, 798, 1080
MbiI CCGCTC 1 cut(s) 216
MboI GATC 3 cut(s) 128, 796, 1078
MboII GAAGA 8 cut(s) 80, 334, 512, 515, 703, 821, 1066, 1508
MfeI CAATTG 1 cut(s) 1167
MhlI GDGCHC 2 cut(s) 1456, 1494
MlsI TGGCCA 2 cut(s) 308, 1019
MluCI AATT 9 cut(s) 140, 482, 625, 750, 804, 893, 1167, 1253, 1300
MluNI TGGCCA 2 cut(s) 308, 1019
MlyI GAGTC 1 cut(s) 673
MmeI TCCRAC 5 cut(s) 185, 302, 615, 707, 954
Mox20I TGGCCA 2 cut(s) 308, 1019
Mph1103I ATGCAT 1 cut(s) 1231
MroI TCCGGA 1 cut(s) 1282
MroXI GAANNNNTTC 1 cut(s) 1229
MscI TGGCCA 2 cut(s) 308, 1019
MseI TTAA 4 cut(s) 561, 803, 1100, 1113
MslI CAYNNNNRTG 1 cut(s) 929
Msp20I TGGCCA 2 cut(s) 308, 1019
MspA1I CMGCKG 3 cut(s) 365, 1175, 1394
MspI CCGG 1 cut(s) 1283
MspR9I CCNGG 2 cut(s) 1322, 1368
MunI CAATTG 1 cut(s) 1167
Mva1269I GAATGC 2 cut(s) 1229, 1231
MvaI CCWGG 2 cut(s) 1322, 1368
MwoI GCNNNNNNNGC 3 cut(s) 222, 305, 1388
NcoI CCATGG 1 cut(s) 20
NdeII GATC 3 cut(s) 128, 796, 1078
NlaIII CATG 7 cut(s) 24, 245, 322, 332, 940, 1477, 1548
NlaIV GGNNCC 3 cut(s) 1247, 1248, 1319
NmeAIII GCCGAG 2 cut(s) 525, 1486
NsiI ATGCAT 1 cut(s) 1231
NspI RCATGY 1 cut(s) 940
NspV TTCGAA 1 cut(s) 137
PaeR7I CTCGAG 1 cut(s) 906
PagI TCATGA 1 cut(s) 318
PciSI GCTCTTC 1 cut(s) 804
PctI GAATGC 2 cut(s) 1229, 1231
PdmI GAANNNNTTC 1 cut(s) 1229
PfeI GAWTC 4 cut(s) 28, 54, 789, 839
PflMI CCANNNNNTGG 1 cut(s) 179
PfoI TCCNGGA 1 cut(s) 1366
PkrI GCNGC 5 cut(s) 367, 887, 1174, 1390, 1393
PleI GAGTC 1 cut(s) 673
PpsI GAGTC 1 cut(s) 673
PpuMI RGGWCCY 1 cut(s) 1246
PshBI ATTAAT 1 cut(s) 561
Psp1406I AACGTT 1 cut(s) 671
Psp5II RGGWCCY 1 cut(s) 1246
Psp6I CCWGG 2 cut(s) 1320, 1366
PspFI CCCAGC 1 cut(s) 1201
PspGI CCWGG 2 cut(s) 1320, 1366
PspN4I GGNNCC 3 cut(s) 1247, 1248, 1319
PspPI GGNCC 2 cut(s) 245, 1246
PspPPI RGGWCCY 1 cut(s) 1246
PstI CTGCAG 1 cut(s) 1393
PvuII CAGCTG 3 cut(s) 365, 1175, 1394
RsaI GTAC 1 cut(s) 422
RsaNI GTAC 1 cut(s) 421
RseI CAYNNNNRTG 1 cut(s) 929
SapI GCTCTTC 1 cut(s) 804
SaqAI TTAA 4 cut(s) 561, 803, 1100, 1113
SatI GCNGC 5 cut(s) 366, 886, 1173, 1389, 1392
Sau3AI GATC 3 cut(s) 128, 796, 1078
Sau96I GGNCC 2 cut(s) 245, 1246
ScaI AGTACT 1 cut(s) 422
SchI GAGTC 1 cut(s) 673
ScrFI CCNGG 2 cut(s) 1322, 1368
SduI GDGCHC 2 cut(s) 1456, 1494
SfaNI GCATC 1 cut(s) 564
SfcI CTRYAG 2 cut(s) 360, 1389
Sfr274I CTCGAG 1 cut(s) 906
SfuI TTCGAA 1 cut(s) 137
SinI GGWCC 1 cut(s) 1246
SlaI CTCGAG 1 cut(s) 906
SmiMI CAYNNNNRTG 1 cut(s) 929
SmlI CTYRAG 1 cut(s) 906
SmoI CTYRAG 1 cut(s) 906
SpeI ACTAGT 1 cut(s) 283
Sse9I AATT 9 cut(s) 140, 482, 625, 750, 804, 893, 1167, 1253, 1300
SsiI CCGC 2 cut(s) 214, 1382
SspMI CTAG 4 cut(s) 197, 284, 606, 1443
StyD4I CCNGG 2 cut(s) 1320, 1366
StyI CCWWGG 4 cut(s) 20, 309, 843, 1467
TaaI ACNGT 2 cut(s) 337, 1498
TaiI ACGT 1 cut(s) 674
TaqI TCGA 7 cut(s) 137, 453, 777, 897, 907, 1006, 1083
TasI AATT 9 cut(s) 140, 482, 625, 750, 804, 893, 1167, 1253, 1300
TatI WGTACW 1 cut(s) 420
TfiI GAWTC 4 cut(s) 28, 54, 789, 839
Tru1I TTAA 4 cut(s) 561, 803, 1100, 1113
Tru9I TTAA 4 cut(s) 561, 803, 1100, 1113
TscAI CASTG 3 cut(s) 180, 1461, 1501
TseI GCWGC 5 cut(s) 365, 885, 1172, 1388, 1391
TspDTI ATGAA 4 cut(s) 108, 282, 335, 1324
TspRI CASTG 3 cut(s) 180, 1461, 1501
Van91I CCANNNNNTGG 1 cut(s) 179
VneI GTGCAC 1 cut(s) 1452
VpaK11BI GGWCC 1 cut(s) 1246
VspI ATTAAT 1 cut(s) 561
XapI RAATTY 4 cut(s) 140, 625, 893, 1253
XceI RCATGY 1 cut(s) 940
XhoI CTCGAG 1 cut(s) 906
XmnI GAANNNNTTC 1 cut(s) 1229
XspI CTAG 4 cut(s) 197, 284, 606, 1443
ZrmI AGTACT 1 cut(s) 422
Zsp2I ATGCAT 1 cut(s) 1231
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.