Rorug05G0112200

Belongs to the iron ascorbate-dependent oxidoreductase family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
9991787 .. 9995319
3533 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0112200.1

Sequence Viewer

Length: 1518 bp
ATGAAACTTATGGGGCCTCACCATCACACAAAGAAAAGTGGATCAAACAATAACTCCTCAAGAACTTCACCTTCTAAGCTTGGGGATTCTGAGTTTGTCAAAAACAGCTTGTTGGACACCATGAATGGAGATGAAGAAGTTTCATCGATTAGCTTAGATGTTCTGTCTACAAATTTGTCCAGTGAAGTTGCCCTGCCAAGAGAAAACGGTGATGTCAATCGTGCTAAATTACAGCAATGTACAAAGGGTGACGGTGGTAATTCGAGCACAGTTTACCCCCTGAGGATAATGGAAGATGATAATCTTGATTATGACAGTAATGCCAGTTCATCCAGTTTTGAGTTCCATAAAGGGGAGAAATCAGTGCATAAACACATTTCAAGAGCACTCTCAAGAACTATGCCATCTAAGTGGAATGATGCTGAGAAATGGATACTGAATAAGCAAATTGTGCAAGCTAACTTTCCTAGGAAGAATGCTTTACAAAACCAAACAAATCGGTTGCCGGTGGCCAATATGGGGAGGGTGGCTCCTGAATCTGCAAATTATGATCACAAGCTAAATAGCAGAGTAGTAGACACAAAGCGAGTTGATTTCTGTCTACCTGCATCGCAGATTGGCTTTGATAAGTTCTGTTTTGTTTCTTCTGAATCTCACCCCAATTCAGGTCAAGCTTGTGGAGGCAATGCATCATTTGATGCATCTTCTCAAAGTAAAGATTTAAAGGAAGTTGAGGACAGGCCCTGCTCAAAAAGTTCGGTGGAAGAAACTTCCACAGCCACTTCTGCCATAAGATCAGTCTCAATGAGAGACATGGGAACAGAAATGACACCAGAAATGACACCAATCCCAAGTCAAGAGCCTTCAAGGACATCTACTCCTTTAGGGGCAACAACCCCGATCCGCAGCCCAACTTCCTCAATCCCCTCAACTCCTCGGAGAGGTGCACCAGCTCCAACACCTACCACCGATGAGGAATCACAGAAACAAATTGAAAGCAACAAGAGAGAATTGTCAGAAGAAGAACAGAAGCTCAAGACGAGGAGGGAGATTGTAGAACTCGGTGTCCAGCTTGGTAAGATGAACATTGCTGCTTGGGCAAGTAAAGCTGAGCAGGAGAAGACAAAAACTTGTGCTGAAACAGTTGATATGGTGGAACTTGAGCGGGTTGAATTTGAAAAACGTGCAGCTGCCTGGGAGGAAGTTGAAAAATCTAAGCATATGGCAAGATATAAGCGTGATGAAATCCAAATCCAAGCATGGGAAAGCCAGCAGAAGGCAAAACTAGAAGCAGAGATGCGGCGAATAGAGGCTCAAGTTGAACAAATGAGAGCTCAAGCTCAATCCAAGATGATGAGGAAGATAGCATTAGCAAGTCAAAGATCTGAAGAAAAACGGGCAGCCGCAGTAGCGAGAAAAACTCAGAATGCAGAGAAAACTGCAGCTCAAGCAGAATATATTCGCCAGACTGGACGAATGCCACCTTCTCATTACATGTGTTGTGGATGGTTGTCGTGA

Protein Analysis

505

Amino Acids

56.27

Weight (kDa)

8.46

Isoelectric Point (pI)

61.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Remorin_C PF03763 392 - 495 1.7e-29 Remorin, C-terminal region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 613
AccBSI CCGCTC 1 cut(s) 1165
AccI GTMKAC 3 cut(s) 167, 576, 601
AciI CCGC 4 cut(s) 904, 1165, 1300, 1404
AclWI GGATC 2 cut(s) 49, 895
AcoI YGGCCR 1 cut(s) 510
AcsI RAATTY 2 cut(s) 172, 1172
AcuI CTGAAG 1 cut(s) 1407
AfaI GTAC 1 cut(s) 241
AfiI CCNNNNNNNGG 6 cut(s) 352, 519, 665, 941, 1261, 1276
AflIII ACRYGT 1 cut(s) 1494
AgsI TTSAA 7 cut(s) 381, 867, 995, 1172, 1178, 1208, 1322
AjnI CCWGG 1 cut(s) 1193
AloI GAACNNNNNNTCC 2 cut(s) 1050, 1082
Alw21I GWGCWC 4 cut(s) 269, 388, 949, 1336
Alw26I GTCTC 2 cut(s) 804, 805
Alw44I GTGCAC 1 cut(s) 945
AlwI GGATC 2 cut(s) 49, 895
AlwNI CAGNNNCTG 1 cut(s) 744
AoxI GGCC 3 cut(s) 14, 510, 740
ApaLI GTGCAC 1 cut(s) 945
ApeKI GCWGC 6 cut(s) 906, 1091, 1187, 1190, 1400, 1442
ApoI RAATTY 2 cut(s) 172, 1172
Asp700I GAANNNNTTC 1 cut(s) 1458
AspA2I CCTAGG 1 cut(s) 467
AspS9I GGNCC 2 cut(s) 14, 741
AsuHPI GGTGA 5 cut(s) 11, 60, 221, 260, 647
AvrII CCTAGG 1 cut(s) 467
AxyI CCTNAGG 1 cut(s) 281
BaeGI GKGCMC 1 cut(s) 949
BalI TGGCCA 1 cut(s) 512
BanII GRGCYC 1 cut(s) 1336
BbsI GAAGAC 1 cut(s) 1127
Bbv12I GWGCWC 4 cut(s) 269, 388, 949, 1336
BbvI GCAGC 6 cut(s) 918, 1078, 1177, 1199, 1412, 1454
BccI CCATC 3 cut(s) 30, 412, 1500
BciT130I CCWGG 1 cut(s) 1195
BciVI GTATCC 1 cut(s) 426
BclI TGATCA 1 cut(s) 550
BcoDI GTCTC 2 cut(s) 804, 805
BfaI CTAG 2 cut(s) 468, 1286
BfmI CTRYAG 1 cut(s) 1440
BfuAI ACCTGC 1 cut(s) 613
BfuI GTATCC 1 cut(s) 426
BglII AGATCT 1 cut(s) 1382
BisI GCNGC 8 cut(s) 907, 1092, 1188, 1191, 1301, 1401, 1404, 1443
BlnI CCTAGG 1 cut(s) 467
BlpI GCTNAGC 1 cut(s) 1110
BlsI GCNGC 8 cut(s) 908, 1093, 1189, 1192, 1302, 1402, 1405, 1444
Bme1390I CCNGG 1 cut(s) 1195
BmgT120I GGNCC 2 cut(s) 14, 741
BmiI GGNNCC 2 cut(s) 15, 531
BmrFI CCNGG 1 cut(s) 1195
BmsI GCATC 6 cut(s) 409, 617, 688, 698, 710, 1287
BpiI GAAGAC 1 cut(s) 1127
BplI GAGNNNNNCTC 4 cut(s) 514, 546, 1405, 1437
Bpu1102I GCTNAGC 1 cut(s) 1110
BpuEI CTTGAG 7 cut(s) 43, 376, 1019, 1181, 1299, 1320, 1431
Bsa29I ATCGAT 1 cut(s) 146
BsaBI GATNNNNATC 2 cut(s) 216, 300
BsaJI CCNNGG 3 cut(s) 467, 935, 1194
BsaXI ACNNNNNCTCC 4 cut(s) 38, 68, 862, 892
Bsc4I CCNNNNNNNGG 6 cut(s) 352, 519, 665, 941, 1261, 1276
Bse118I RCCGGY 1 cut(s) 505
Bse1I ACTGG 4 cut(s) 180, 324, 333, 1474
Bse21I CCTNAGG 1 cut(s) 281
Bse3DI GCAATG 3 cut(s) 242, 691, 1086
Bse8I GATNNNNATC 2 cut(s) 216, 300
BseBI CCWGG 1 cut(s) 1195
BseCI ATCGAT 1 cut(s) 146
BseDI CCNNGG 3 cut(s) 467, 935, 1194
BseGI GGATG 2 cut(s) 329, 1511
BseJI GATNNNNATC 2 cut(s) 216, 300
BseLI CCNNNNNNNGG 6 cut(s) 352, 519, 665, 941, 1261, 1276
BseMI GCAATG 3 cut(s) 242, 691, 1086
BseMII CTCAG 5 cut(s) 81, 272, 414, 1101, 1436
BseNI ACTGG 4 cut(s) 180, 324, 333, 1474
BseRI GAGGAG 3 cut(s) 46, 924, 1057
BseSI GKGCMC 1 cut(s) 949
BseXI GCAGC 6 cut(s) 918, 1078, 1177, 1199, 1412, 1454
BsgI GTGCAG 1 cut(s) 1206
BshFI GGCC 3 cut(s) 16, 512, 742
BshVI ATCGAT 1 cut(s) 146
BsiHKAI GWGCWC 4 cut(s) 269, 388, 949, 1336
BsiSI CCGG 1 cut(s) 506
BslI CCNNNNNNNGG 6 cut(s) 352, 519, 665, 941, 1261, 1276
BsmAI GTCTC 2 cut(s) 804, 805
BsmI GAATGC 3 cut(s) 481, 1432, 1482
BsnI GGCC 3 cut(s) 16, 512, 742
Bsp1286I GDGCHC 4 cut(s) 269, 388, 949, 1336
Bsp1407I TGTACA 1 cut(s) 239
Bsp143I GATC 5 cut(s) 41, 550, 794, 900, 1382
Bsp1720I GCTNAGC 1 cut(s) 1110
BspACI CCGC 4 cut(s) 904, 1165, 1300, 1404
BspANI GGCC 3 cut(s) 16, 512, 742
BspCNI CTCAG 5 cut(s) 82, 273, 415, 1102, 1435
BspDI ATCGAT 1 cut(s) 146
BspLI GGNNCC 2 cut(s) 15, 531
BspMAI CTGCAG 1 cut(s) 1444
BspMI ACCTGC 1 cut(s) 613
BspPI GGATC 2 cut(s) 49, 895
BsrBI CCGCTC 1 cut(s) 1165
BsrDI GCAATG 3 cut(s) 242, 691, 1086
BsrFI RCCGGY 1 cut(s) 505
BsrGI TGTACA 1 cut(s) 239
BsrI ACTGG 4 cut(s) 180, 324, 333, 1474
BssAI RCCGGY 1 cut(s) 505
BssECI CCNNGG 3 cut(s) 467, 935, 1194
BssMI GATC 5 cut(s) 41, 550, 794, 900, 1382
BssT1I CCWWGG 1 cut(s) 467
Bst2UI CCWGG 1 cut(s) 1195
Bst4CI ACNGT 5 cut(s) 209, 254, 271, 317, 1144
BstAPI GCANNNNNTGC 1 cut(s) 451
BstAUI TGTACA 1 cut(s) 239
BstC8I GCNNGC 2 cut(s) 456, 1271
BstDEI CTNAG 9 cut(s) 75, 90, 154, 281, 408, 423, 1110, 1215, 1422
BstENI CCTNNNNNAGG 1 cut(s) 939
BstF5I GGATG 2 cut(s) 329, 1511
BstKTI GATC 5 cut(s) 44, 553, 797, 903, 1385
BstMAI GTCTC 2 cut(s) 804, 805
BstMBI GATC 5 cut(s) 41, 550, 794, 900, 1382
BstMWI GCNNNNNNNGC 6 cut(s) 451, 785, 1097, 1106, 1409, 1448
BstNI CCWGG 1 cut(s) 1195
BstNSI RCATGY 1 cut(s) 1498
BstSCI CCNGG 1 cut(s) 1193
BstSFI CTRYAG 1 cut(s) 1440
BstSLI GKGCMC 1 cut(s) 949
BstV1I GCAGC 6 cut(s) 918, 1078, 1177, 1199, 1412, 1454
BstV2I GAAGAC 1 cut(s) 1127
BstX2I RGATCY 1 cut(s) 1382
BstXI CCANNNNNNTGG 1 cut(s) 411
BstYI RGATCY 1 cut(s) 1382
Bsu15I ATCGAT 1 cut(s) 146
Bsu36I CCTNAGG 1 cut(s) 281
BsuI GTATCC 1 cut(s) 426
BsuRI GGCC 3 cut(s) 16, 512, 742
BsuTUI ATCGAT 1 cut(s) 146
BtgZI GCGATG 1 cut(s) 594
BtsCI GGATG 2 cut(s) 329, 1511
BtsIMutI CAGTG 2 cut(s) 187, 369
BveI ACCTGC 1 cut(s) 613
Cac8I GCNNGC 2 cut(s) 456, 1271
CaiI CAGNNNCTG 1 cut(s) 744
Cfr10I RCCGGY 1 cut(s) 505
Cfr13I GGNCC 2 cut(s) 14, 741
ClaI ATCGAT 1 cut(s) 146
Csp6I GTAC 1 cut(s) 240
CviAII CATG 4 cut(s) 121, 814, 1260, 1495
CviQI GTAC 1 cut(s) 240
DdeI CTNAG 9 cut(s) 75, 90, 154, 281, 408, 423, 1110, 1215, 1422
DpnI GATC 5 cut(s) 43, 552, 796, 902, 1384
DpnII GATC 5 cut(s) 41, 550, 794, 900, 1382
DraI TTTAAA 1 cut(s) 723
EaeI YGGCCR 1 cut(s) 510
Ecl136II GAGCTC 1 cut(s) 1334
Eco130I CCWWGG 1 cut(s) 467
Eco24I GRGCYC 1 cut(s) 1336
Eco53kI GAGCTC 1 cut(s) 1334
Eco57I CTGAAG 1 cut(s) 1407
Eco81I CCTNAGG 1 cut(s) 281
EcoICRI GAGCTC 1 cut(s) 1334
EcoNI CCTNNNNNAGG 1 cut(s) 939
EcoO109I RGGNCCY 2 cut(s) 14, 741
EcoRII CCWGG 1 cut(s) 1193
EcoT14I CCWWGG 1 cut(s) 467
EcoT22I ATGCAT 2 cut(s) 691, 703
EcoT38I GRGCYC 1 cut(s) 1336
ErhI CCWWGG 1 cut(s) 467
FaeI CATG 4 cut(s) 124, 817, 1263, 1498
FatI CATG 4 cut(s) 120, 813, 1259, 1494
FauI CCCGC 1 cut(s) 1158
FauNDI CATATG 1 cut(s) 1221
FbaI TGATCA 1 cut(s) 550
FblI GTMKAC 3 cut(s) 167, 576, 601
Fnu4HI GCNGC 8 cut(s) 907, 1092, 1188, 1191, 1301, 1401, 1404, 1443
FokI GGATG 1 cut(s) 316
FriOI GRGCYC 1 cut(s) 1336
Fsp4HI GCNGC 8 cut(s) 907, 1092, 1188, 1191, 1301, 1401, 1404, 1443
FspBI CTAG 2 cut(s) 468, 1286
GluI GCNGC 8 cut(s) 907, 1092, 1188, 1191, 1301, 1401, 1404, 1443
HaeIII GGCC 3 cut(s) 16, 512, 742
HapII CCGG 1 cut(s) 506
Hin1II CATG 4 cut(s) 124, 817, 1263, 1498
HindIII AAGCTT 2 cut(s) 77, 672
HinfI GANTC 4 cut(s) 86, 536, 650, 977
HpaII CCGG 1 cut(s) 506
HphI GGTGA 5 cut(s) 11, 60, 221, 260, 647
Hpy166II GTNNAC 5 cut(s) 168, 274, 577, 602, 947
Hpy188I TCNGA 6 cut(s) 91, 649, 939, 1018, 1387, 1425
Hpy188III TCNNGA 8 cut(s) 60, 305, 381, 393, 533, 857, 1036, 1515
Hpy8I GTNNAC 5 cut(s) 168, 274, 577, 602, 947
HpyAV CCTTC 4 cut(s) 81, 873, 1270, 1494
HpyCH4III ACNGT 5 cut(s) 209, 254, 271, 317, 1144
HpyCH4IV ACGT 1 cut(s) 1183
HpyF10VI GCNNNNNNNGC 6 cut(s) 451, 785, 1097, 1106, 1409, 1448
HpyF3I CTNAG 9 cut(s) 75, 90, 154, 281, 408, 423, 1110, 1215, 1422
HpySE526I ACGT 1 cut(s) 1183
Hsp92II CATG 4 cut(s) 124, 817, 1263, 1498
Ksp22I TGATCA 1 cut(s) 550
Kzo9I GATC 5 cut(s) 41, 550, 794, 900, 1382
LmnI GCTCC 2 cut(s) 535, 958
Lsp1109I GCAGC 6 cut(s) 918, 1078, 1177, 1199, 1412, 1454
LweI GCATC 6 cut(s) 409, 617, 688, 698, 710, 1287
MaeI CTAG 2 cut(s) 468, 1286
MaeII ACGT 1 cut(s) 1183
MaeIII GTNAC 1 cut(s) 248
MalI GATC 5 cut(s) 43, 552, 796, 902, 1384
MbiI CCGCTC 1 cut(s) 1165
MboI GATC 5 cut(s) 41, 550, 794, 900, 1382
MflI RGATCY 1 cut(s) 1382
MhlI GDGCHC 4 cut(s) 269, 388, 949, 1336
MlsI TGGCCA 1 cut(s) 512
MluCI AATT 9 cut(s) 172, 227, 259, 447, 544, 661, 990, 1010, 1172
MluNI TGGCCA 1 cut(s) 512
MmeI TCCRAC 2 cut(s) 93, 980
Mox20I TGGCCA 1 cut(s) 512
Mph1103I ATGCAT 2 cut(s) 691, 703
MroXI GAANNNNTTC 1 cut(s) 1458
MscI TGGCCA 1 cut(s) 512
MseI TTAA 1 cut(s) 722
MslI CAYNNNNRTG 1 cut(s) 409
Msp20I TGGCCA 1 cut(s) 512
MspA1I CMGCKG 1 cut(s) 1190
MspI CCGG 1 cut(s) 506
MspR9I CCNGG 1 cut(s) 1195
Mva1269I GAATGC 3 cut(s) 481, 1432, 1482
MvaI CCWGG 1 cut(s) 1195
MwoI GCNNNNNNNGC 6 cut(s) 451, 785, 1097, 1106, 1409, 1448
NdeI CATATG 1 cut(s) 1221
NdeII GATC 5 cut(s) 41, 550, 794, 900, 1382
NlaIII CATG 4 cut(s) 124, 817, 1263, 1498
NlaIV GGNNCC 2 cut(s) 15, 531
NmuCI GTSAC 1 cut(s) 248
NsiI ATGCAT 2 cut(s) 691, 703
NspI RCATGY 1 cut(s) 1498
PciI ACATGT 1 cut(s) 1494
PctI GAATGC 3 cut(s) 481, 1432, 1482
PdmI GAANNNNTTC 1 cut(s) 1458
PfeI GAWTC 4 cut(s) 86, 536, 650, 977
PkrI GCNGC 8 cut(s) 908, 1093, 1189, 1192, 1302, 1402, 1405, 1444
PscI ACATGT 1 cut(s) 1494
Psp124BI GAGCTC 1 cut(s) 1336
Psp6I CCWGG 1 cut(s) 1193
PspGI CCWGG 1 cut(s) 1193
PspN4I GGNNCC 2 cut(s) 15, 531
PspPI GGNCC 2 cut(s) 14, 741
PsrI GAACNNNNNNTAC 2 cut(s) 310, 342
PstI CTGCAG 1 cut(s) 1444
PstNI CAGNNNCTG 1 cut(s) 744
PsuI RGATCY 1 cut(s) 1382
PvuII CAGCTG 1 cut(s) 1190
RsaI GTAC 1 cut(s) 241
RsaNI GTAC 1 cut(s) 240
RseI CAYNNNNRTG 1 cut(s) 409
SacI GAGCTC 1 cut(s) 1336
SaqAI TTAA 1 cut(s) 722
SatI GCNGC 8 cut(s) 907, 1092, 1188, 1191, 1301, 1401, 1404, 1443
Sau3AI GATC 5 cut(s) 41, 550, 794, 900, 1382
Sau96I GGNCC 2 cut(s) 14, 741
ScrFI CCNGG 1 cut(s) 1195
SduI GDGCHC 4 cut(s) 269, 388, 949, 1336
SfaNI GCATC 6 cut(s) 409, 617, 688, 698, 710, 1287
SfcI CTRYAG 1 cut(s) 1440
SmiMI CAYNNNNRTG 1 cut(s) 409
SmlI CTYRAG 7 cut(s) 58, 391, 1034, 1160, 1314, 1335, 1446
SmoI CTYRAG 7 cut(s) 58, 391, 1034, 1160, 1314, 1335, 1446
Sse9I AATT 9 cut(s) 172, 227, 259, 447, 544, 661, 990, 1010, 1172
SsiI CCGC 4 cut(s) 904, 1165, 1300, 1404
SspMI CTAG 2 cut(s) 468, 1286
SstI GAGCTC 1 cut(s) 1336
StyD4I CCNGG 1 cut(s) 1193
StyI CCWWGG 1 cut(s) 467
TaaI ACNGT 5 cut(s) 209, 254, 271, 317, 1144
TaiI ACGT 1 cut(s) 1186
TaqI TCGA 2 cut(s) 146, 263
TasI AATT 9 cut(s) 172, 227, 259, 447, 544, 661, 990, 1010, 1172
TatI WGTACW 1 cut(s) 239
TauI GCSGC 2 cut(s) 1303, 1406
TfiI GAWTC 4 cut(s) 86, 536, 650, 977
Tru1I TTAA 1 cut(s) 722
Tru9I TTAA 1 cut(s) 722
TscAI CASTG 2 cut(s) 187, 369
TseFI GTSAC 1 cut(s) 248
TseI GCWGC 6 cut(s) 906, 1091, 1187, 1190, 1400, 1442
Tsp45I GTSAC 1 cut(s) 248
TspDTI ATGAA 7 cut(s) 17, 132, 137, 147, 318, 1097, 1257
TspRI CASTG 2 cut(s) 187, 369
VneI GTGCAC 1 cut(s) 945
XagI CCTNNNNNAGG 1 cut(s) 939
XapI RAATTY 2 cut(s) 172, 1172
XceI RCATGY 1 cut(s) 1498
XmaJI CCTAGG 1 cut(s) 467
XmiI GTMKAC 3 cut(s) 167, 576, 601
XmnI GAANNNNTTC 1 cut(s) 1458
XspI CTAG 2 cut(s) 468, 1286
Zsp2I ATGCAT 2 cut(s) 691, 703
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.