Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0000963

Physical Location & Seq

Genomic Coordinates Reverse (-)

244454 .. 247112

Gene Structure 2659 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0003500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1794 bp

ATGCTGGGGATTGAATTGGAGTCGATCGGTCTTGCATTCAAGAGCTCGGAAATCAAAATGGCCAACGTCCGCGTAAAGGATCAGCAAAAGGCTTCACCAGATTCTGCAAAGGCAGAGGTGGGAGAGGTTGACACCAGAGCTCCCTTCCAATCTGTCAAAGCTGCTGTTAGTCTGTTTGGTGAAGTCGCCGTTTCTAAAGGGAAACAAGCATCACCAACCAAGAAAAAGCTATCAGAGAATGATGAACTGGACATGGAGACACAGCTTCTGTTGGCCCGGAAAGAACTCACCAAGGTTAAGCAACAACTAGAGAGTGCTGAAACCACAAAAGCTCGAGCACTTTCCGAACTTGACAAGGCTAAGAGAACACTAGAGGAACTAAATACCAAGATCAAAAGTGTAAGCGACTCCAAGAAATCAGCAATGAAAGCTGCCGAAGAAGTACTCAAGGCTCGCGCCAAGAATCTGGAAGAGGTGAAAGCCAGAGAATCAATTGAAGGTGCTGCTTGGAAACAAGAATTGGACCATGCAAGAAACGAGTACATAAGCACGGTCACCCAACTTGATGCTGCAAAGCAAGAGCTCACCAAAATCCGGCAGGACTTTGATGCCGCCTTGGAAGCAAAACTGGTTGCGTTCCAACAGGCAGGAGAAGCTCAACGTTCAGCAAAAGTTAACTCCGACAGGGTCACTGAGCTCCGAAAGGAAATTGCAGCCATGCAAGGATCCATTGAGCAGCTAAAAGTCGTCTCTATACATGCCCAACAAGAGCAGGCAAAGGTTGTGGCCGAAAGGGAGGCCCGCCTACAAGATTACAAAGCTGCTAAGCAACAAGCAGAAGACAGACTGCTATCTCTCAAGGAGGAAGTTGATCCTGAACTAATCAAAGATCTGGAGGCAAAGCTTGGACAAACAACAGTGGAAGTTGAGGTCTTACAGGAGGAAATGAGAAAAGCCCATGCGTCCGAAATGGACTCTGTGAGAGTTGTGACAATGGAGCTGAATGAAGCCACAAAGAAGCTGCAGGAAGTTGCTGAAGAAGAGAGCTCTCTTCGGAGCTTTGTGAGCTCCCTCAGGCTGGAATTGGAGGATGTGAAGAGGGAAACCGGTGAACTCAGGAACAAGGAAATGGAACTGGAAGCTCTTGCTACTAGTCTGACTGCTGAAATGGAGAAAAACAAAGCCGAGGCTGAGCGGTTCAAGGAAGAGGCAGATCGTGCGGCAGTCCAGAAGCTGTCATCAGAAACCGAAAGCGCAAGACTGGAAGCCGAGAAGATGAAACAAAATGTTGTTCAACAGAAGCGAGAAGCTGAAGATAGTCGAAATTCAGCGGAGGAAGCAGAGAAGAAACTGAAACTTGCACTGGAAGAAGCTGAAGATGCAATAGAAGCAGAGAAAAGAGCCCTGGTACAGCTGAAGGCCTTATCCGGGACACATCATGACACAGCAGCTTCAGAGAGCACTACTCCTAGTACAACTGGGAAGATCAAATTATCATTGGAGGACTATGAGTGTTTGAGTAGGAAAGCGAAGGAATGTGAAAGCTTGGCTGAGATAAAAGAGGCAGAGTGCATTGTCCAAGTAGAAGCGATCAGTGTGAGAAAGAATGAAGCAGATAAAAGGTTGGAGGCCTCCTTAAAAGCGATAGAGGAAATCAAGACTGCAACAAACTTGGCACTGAGAAACGCAGAGTCGGCAGATTCAGCAAAATCGGTGGTTGAGGGTGAACTTCGCAAGTGGCGTCAAGAAGAACAAACGGTGGTGGTAGGCGAGTCATCACGGCCACCCTTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0010150 GO:0016491 GO:0016679 GO:0016682 GO:0032501 GO:0032502 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0055114 GO:0090693 GO:0099402

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

2OG-FeII_Oxy DIOX_N

Protein Analysis

597

Amino Acids

66.43

Weight (kDa)

5.24

Isoelectric Point (pI)

48.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WEMBL	PF05701	42 - 585	1.2e-42	Weak chloroplast movement under blue light

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000963)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17010 AT1G17020 AT4G25300 AT4G25300 AT4G25310 AT4G25310
fragaria_vesca	FvH4_3g06511 FvH4_3g06511 FvH4_3g06511 FvH4_3g06511 FvH4_3g06511 FvH4_3g06511 FvH4_3g06511 FvH4_3g06511 FvH4_3g06511 FvH4_3g06512 FvH4_3g06513 FvH4_3g06513 FvH4_3g06513 FvH4_3g17470
malus_domestica	MD03G1251500.v1.1 MD11G1271400.v1.1 MD11G1272000.v1.1 MD11G1272100.v1.1 MD11G1272300.v1.1 MD11G1272400.v1.1 MD11G1272500.v1.1
prunus_persica	Prupe.4G154800_v2.0.a1 Prupe.4G154800_v2.0.a1 Prupe.4G154900_v2.0.a1 Prupe.4G155000_v2.0.a1 Prupe.4G155100_v2.0.a1
pyrus_communis	pycom11g23990 pycom11g24060 pycom11g24070
rosa_chinensis	RchiOBHm_Chr5g0012661 RchiOBHm_Chr5g0028991 RchiOBHm_Chr5g0029011
rosa_laevigata	RLG00000031946 RLG00000033134
rosa_multiflora	Rmu_sc0003577.1_g000001 Rmu_sc0009042.1_g000002 Rmu_sc0011332.1_g000001 Rmu_sc0011896.1_g000003
rosa_roxburghii	Rroxscaffold_1G00050860 Rroxscaffold_1G00050890 Rroxscaffold_1G00063940
rosa_rugosa	Rorug05G0003500 Rorug05G0112200
rosa_samantha	Rh5AG097300 Rh5AG204300 Rh5AG204400 Rh5BG093700 Rh5BG202600 Rh5BG202700 Rh5CG223500 Rh5CG223600 Rh5DG092800 Rh5DG206300 Rh5DG206400
rosa_wichuraiana	Rw5G008530 Rw5G018520 Rw5G018530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	1195
AccII	CGCG	2 cut(s)	72, 456
AciI	CCGC	6 cut(s)	70, 612, 802, 1195, 1220, 1331
AclI	AACGTT	1 cut(s)	661
AclWI	GGATC	4 cut(s)	87, 720, 733, 866
AcoI	YGGCCR	3 cut(s)	60, 786, 1781
AcsI	RAATTY	1 cut(s)	1324
AcuI	CTGAAG	5 cut(s)	1056, 1332, 1395, 1436, 1437
AcyI	GRCGYC	1 cut(s)	1741
AfaI	GTAC	4 cut(s)	444, 542, 1410, 1474
AfiI	CCNNNNNNNGG	4 cut(s)	76, 594, 1078, 1428
AgeI	ACCGGT	1 cut(s)	1106
AgsI	TTSAA	5 cut(s)	14, 40, 497, 1201, 1295
AhlI	ACTAGT	1 cut(s)	1151
AjnI	CCWGG	1 cut(s)	1404
AjuI	GAANNNNNNNTTGG	2 cut(s)	503, 535
Alw21I	GWGCWC	8 cut(s)	47, 142, 340, 585, 699, 1049, 1070, 1463
Alw26I	GTCTC	2 cut(s)	251, 754
AlwI	GGATC	4 cut(s)	87, 720, 733, 866
AlwNI	CAGNNNCTG	3 cut(s)	104, 268, 1234
Ama87I	CYCGRG	1 cut(s)	333
AoxI	GGCC	7 cut(s)	60, 273, 786, 798, 1419, 1629, 1781
ApeKI	GCWGC	9 cut(s)	161, 431, 503, 569, 713, 736, 821, 1021, 1448
ApoI	RAATTY	1 cut(s)	1324
AsiGI	ACCGGT	1 cut(s)	1106
AspLEI	GCGC	2 cut(s)	458, 1256
AspS9I	GGNCC	3 cut(s)	274, 523, 799
AsuC2I	CCSGG	2 cut(s)	277, 1429
AsuHPI	GGTGA	9 cut(s)	87, 191, 204, 280, 487, 547, 577, 1121, 1736
AvaI	CYCGRG	1 cut(s)	333
AvaII	GGWCC	1 cut(s)	523
AxyI	CCTNAGG	1 cut(s)	1073
BalI	TGGCCA	1 cut(s)	62
BamHI	GGATCC	1 cut(s)	725
BanII	GRGCYC	7 cut(s)	47, 142, 585, 699, 1049, 1070, 1405
BbsI	GAAGAC	1 cut(s)	846
Bbv12I	GWGCWC	8 cut(s)	47, 142, 340, 585, 699, 1049, 1070, 1463
BbvI	GCAGC	9 cut(s)	148, 418, 490, 556, 725, 748, 808, 1008, 1460
BceAI	ACGGC	1 cut(s)	173
BciT130I	CCWGG	1 cut(s)	1406
BcnI	CCSGG	2 cut(s)	277, 1429
BcoDI	GTCTC	2 cut(s)	251, 754
BcuI	ACTAGT	1 cut(s)	1151
BfaI	CTAG	5 cut(s)	308, 371, 1152, 1470, 1792
BfmI	CTRYAG	1 cut(s)	1022
BglII	AGATCT	1 cut(s)	889
BlpI	GCTNAGC	2 cut(s)	825, 1191
BmcAI	AGTACT	1 cut(s)	444
Bme1390I	CCNGG	3 cut(s)	277, 1406, 1429
Bme18I	GGWCC	1 cut(s)	523
BmeT110I	CYCGRG	1 cut(s)	333
BmgT120I	GGNCC	3 cut(s)	274, 523, 799
BmiI	GGNNCC	1 cut(s)	727
BmrFI	CCNGG	3 cut(s)	277, 1406, 1429
BmrI	ACTGGG	1 cut(s)	1488
BmsI	GCATC	4 cut(s)	218, 556, 598, 1369
BmuI	ACTGGG	1 cut(s)	1488
BpiI	GAAGAC	1 cut(s)	846
BplI	GAGNNNNNCTC	2 cut(s)	1450, 1482
BpmI	CTGGAG	1 cut(s)	914
Bpu1102I	GCTNAGC	2 cut(s)	825, 1191
BpuEI	CTTGAG	2 cut(s)	431, 842
BpuMI	CCSGG	2 cut(s)	277, 1429
BsaHI	GRCGYC	1 cut(s)	1741
BsaJI	CCNNGG	4 cut(s)	291, 615, 1185, 1404
BsaWI	WCCGGW	1 cut(s)	1106
BsaXI	ACNNNNNCTCC	2 cut(s)	124, 154
Bsc4I	CCNNNNNNNGG	4 cut(s)	76, 594, 1078, 1428
Bse118I	RCCGGY	1 cut(s)	1106
Bse1I	ACTGG	6 cut(s)	252, 633, 1140, 1266, 1368, 1483
Bse21I	CCTNAGG	1 cut(s)	1073
Bse3DI	GCAATG	1 cut(s)	429
BseBI	CCWGG	1 cut(s)	1406
BseDI	CCNNGG	4 cut(s)	291, 615, 1185, 1404
BseGI	GGATG	1 cut(s)	1096
BseLI	CCNNNNNNNGG	4 cut(s)	76, 594, 1078, 1428
BseMI	GCAATG	1 cut(s)	429
BseMII	CTCAG	6 cut(s)	684, 1087, 1129, 1182, 1542, 1670
BseNI	ACTGG	6 cut(s)	252, 633, 1140, 1266, 1368, 1483
BseXI	GCAGC	9 cut(s)	148, 418, 490, 556, 725, 748, 808, 1008, 1460
BseYI	CCCAGC	1 cut(s)	4
Bsh1236I	CGCG	2 cut(s)	72, 456
Bsh1285I	CGRYCG	1 cut(s)	27
BshFI	GGCC	7 cut(s)	62, 275, 788, 800, 1421, 1631, 1783
BshTI	ACCGGT	1 cut(s)	1106
BsiEI	CGRYCG	1 cut(s)	27
BsiHKAI	GWGCWC	8 cut(s)	47, 142, 340, 585, 699, 1049, 1070, 1463
BsiHKCI	CYCGRG	1 cut(s)	333
BsiSI	CCGG	4 cut(s)	277, 595, 1107, 1428
BslFI	GGGAC	1 cut(s)	1444
BslI	CCNNNNNNNGG	4 cut(s)	76, 594, 1078, 1428
BsmAI	GTCTC	2 cut(s)	251, 754
BsmBI	CGTCTC	1 cut(s)	754
BsmFI	GGGAC	1 cut(s)	1444
BsmI	GAATGC	1 cut(s)	35
BsnI	GGCC	7 cut(s)	62, 275, 788, 800, 1421, 1631, 1783
BsoBI	CYCGRG	1 cut(s)	333
Bsp1286I	GDGCHC	9 cut(s)	47, 142, 340, 585, 699, 1049, 1070, 1405, 1463
Bsp143I	GATC	9 cut(s)	24, 79, 390, 725, 871, 889, 1213, 1485, 1590
Bsp1720I	GCTNAGC	2 cut(s)	825, 1191
BspACI	CCGC	6 cut(s)	70, 612, 802, 1195, 1220, 1331
BspANI	GGCC	7 cut(s)	62, 275, 788, 800, 1421, 1631, 1783
BspCNI	CTCAG	6 cut(s)	685, 1086, 1128, 1183, 1543, 1671
BspFNI	CGCG	2 cut(s)	72, 456
BspHI	TCATGA	1 cut(s)	1438
BspLI	GGNNCC	1 cut(s)	727
BspMAI	CTGCAG	1 cut(s)	1026
BspPI	GGATC	4 cut(s)	87, 720, 733, 866
BsrBI	CCGCTC	1 cut(s)	1195
BsrDI	GCAATG	1 cut(s)	429
BsrFI	RCCGGY	1 cut(s)	1106
BsrI	ACTGG	6 cut(s)	252, 633, 1140, 1266, 1368, 1483
BssAI	RCCGGY	1 cut(s)	1106
BssECI	CCNNGG	4 cut(s)	291, 615, 1185, 1404
BssMI	GATC	9 cut(s)	24, 79, 390, 725, 871, 889, 1213, 1485, 1590
BssNI	GRCGYC	1 cut(s)	1741
BssT1I	CCWWGG	2 cut(s)	291, 615
Bst2UI	CCWGG	1 cut(s)	1406
Bst4CI	ACNGT	3 cut(s)	553, 919, 1759
Bst6I	CTCTTC	5 cut(s)	465, 1035, 1056, 1091, 1200
BstACI	GRCGYC	1 cut(s)	1741
BstAPI	GCANNNNNTGC	1 cut(s)	1217
BstC8I	GCNNGC	3 cut(s)	454, 774, 802
BstDEI	CTNAG	8 cut(s)	360, 693, 825, 1073, 1115, 1191, 1551, 1679
BstEII	GGTNACC	1 cut(s)	553
BstF5I	GGATG	1 cut(s)	1096
BstFNI	CGCG	2 cut(s)	72, 456
BstHHI	GCGC	2 cut(s)	458, 1256
BstKTI	GATC	9 cut(s)	27, 82, 393, 728, 874, 892, 1216, 1488, 1593
BstMAI	GTCTC	2 cut(s)	251, 754
BstMBI	GATC	9 cut(s)	24, 79, 390, 725, 871, 889, 1213, 1485, 1590
BstMCI	CGRYCG	1 cut(s)	27
BstNI	CCWGG	1 cut(s)	1406
BstNSI	RCATGY	1 cut(s)	761
BstPI	GGTNACC	1 cut(s)	553
BstSCI	CCNGG	3 cut(s)	275, 1404, 1427
BstSFI	CTRYAG	1 cut(s)	1022
BstUI	CGCG	2 cut(s)	72, 456
BstV1I	GCAGC	9 cut(s)	148, 418, 490, 556, 725, 748, 808, 1008, 1460
BstV2I	GAAGAC	1 cut(s)	846
BstX2I	RGATCY	2 cut(s)	725, 889
BstXI	CCANNNNNNTGG	1 cut(s)	466
BstYI	RGATCY	2 cut(s)	725, 889
Bsu36I	CCTNAGG	1 cut(s)	1073
BsuRI	GGCC	7 cut(s)	62, 275, 788, 800, 1421, 1631, 1783
BtsCI	GGATG	1 cut(s)	1096
BtsIMutI	CAGTG	5 cut(s)	690, 924, 1361, 1600, 1676
Cac8I	GCNNGC	3 cut(s)	454, 774, 802
CaiI	CAGNNNCTG	3 cut(s)	104, 268, 1234
CciI	TCATGA	1 cut(s)	1438
CfoI	GCGC	2 cut(s)	458, 1256
Cfr10I	RCCGGY	1 cut(s)	1106
Cfr13I	GGNCC	3 cut(s)	274, 523, 799
CseI	GACGC	2 cut(s)	951, 1730
Csp6I	GTAC	4 cut(s)	443, 541, 1409, 1473
CspAI	ACCGGT	1 cut(s)	1106
CspCI	CAANNNNNGTGG	4 cut(s)	765, 800, 1695, 1730
CviAII	CATG	6 cut(s)	253, 527, 718, 758, 959, 1439
CviQI	GTAC	4 cut(s)	443, 541, 1409, 1473
DdeI	CTNAG	8 cut(s)	360, 693, 825, 1073, 1115, 1191, 1551, 1679
DpnI	GATC	9 cut(s)	26, 81, 392, 727, 873, 891, 1215, 1487, 1592
DpnII	GATC	9 cut(s)	24, 79, 390, 725, 871, 889, 1213, 1485, 1590
EaeI	YGGCCR	3 cut(s)	60, 786, 1781
Eam1104I	CTCTTC	5 cut(s)	465, 1035, 1056, 1091, 1200
EarI	CTCTTC	5 cut(s)	465, 1035, 1056, 1091, 1200
Ecl136II	GAGCTC	6 cut(s)	45, 140, 583, 697, 1047, 1068
Eco130I	CCWWGG	2 cut(s)	291, 615
Eco147I	AGGCCT	2 cut(s)	1421, 1631
Eco24I	GRGCYC	7 cut(s)	47, 142, 585, 699, 1049, 1070, 1405
Eco47I	GGWCC	1 cut(s)	523
Eco53kI	GAGCTC	6 cut(s)	45, 140, 583, 697, 1047, 1068
Eco57I	CTGAAG	5 cut(s)	1056, 1332, 1395, 1436, 1437
Eco81I	CCTNAGG	1 cut(s)	1073
Eco88I	CYCGRG	1 cut(s)	333
Eco91I	GGTNACC	1 cut(s)	553
EcoICRI	GAGCTC	6 cut(s)	45, 140, 583, 697, 1047, 1068
EcoO65I	GGTNACC	1 cut(s)	553
EcoRII	CCWGG	1 cut(s)	1404
EcoT14I	CCWWGG	2 cut(s)	291, 615
EcoT38I	GRGCYC	7 cut(s)	47, 142, 585, 699, 1049, 1070, 1405
ErhI	CCWWGG	2 cut(s)	291, 615
Esp3I	CGTCTC	1 cut(s)	754
FaeI	CATG	6 cut(s)	256, 530, 721, 761, 962, 1442
FaiI	YATR	9 cut(s)	254, 528, 545, 719, 755, 759, 960, 1440, 1509
FaqI	GGGAC	1 cut(s)	1444
FatI	CATG	6 cut(s)	252, 526, 717, 757, 958, 1438
FauI	CCCGC	1 cut(s)	809
FokI	GGATG	1 cut(s)	1103
FriOI	GRGCYC	7 cut(s)	47, 142, 585, 699, 1049, 1070, 1405
FspBI	CTAG	5 cut(s)	308, 371, 1152, 1470, 1792
GlaI	GCGC	2 cut(s)	457, 1255
GsaI	CCCAGC	1 cut(s)	8
GsuI	CTGGAG	1 cut(s)	914
HaeIII	GGCC	7 cut(s)	62, 275, 788, 800, 1421, 1631, 1783
HapII	CCGG	4 cut(s)	277, 595, 1107, 1428
HgaI	GACGC	2 cut(s)	951, 1730
HhaI	GCGC	2 cut(s)	458, 1256
Hin1I	GRCGYC	1 cut(s)	1741
Hin1II	CATG	6 cut(s)	256, 530, 721, 761, 962, 1442
Hin6I	GCGC	2 cut(s)	456, 1254
HinP1I	GCGC	2 cut(s)	456, 1254
HincII	GTYRAC	2 cut(s)	130, 676
HindII	GTYRAC	2 cut(s)	130, 676
HindIII	AAGCTT	2 cut(s)	902, 1543
HinfI	GANTC	9 cut(s)	20, 101, 407, 463, 488, 974, 1691, 1700, 1772
HpaI	GTTAAC	1 cut(s)	676
HpaII	CCGG	4 cut(s)	277, 595, 1107, 1428
HphI	GGTGA	9 cut(s)	87, 191, 204, 280, 487, 547, 577, 1121, 1736
Hpy166II	GTNNAC	4 cut(s)	130, 676, 1112, 1727
Hpy188III	TCNNGA	9 cut(s)	40, 467, 875, 893, 1117, 1228, 1439, 1657, 1745
Hpy8I	GTNNAC	4 cut(s)	130, 676, 1112, 1727
HpyAV	CCTTC	4 cut(s)	154, 491, 1411, 1525
HpyCH4III	ACNGT	3 cut(s)	553, 919, 1759
HpyCH4IV	ACGT	2 cut(s)	66, 661
HpyF3I	CTNAG	8 cut(s)	360, 693, 825, 1073, 1115, 1191, 1551, 1679
HpySE526I	ACGT	2 cut(s)	66, 661
Hsp92I	GRCGYC	1 cut(s)	1741
Hsp92II	CATG	6 cut(s)	256, 530, 721, 761, 962, 1442
HspAI	GCGC	2 cut(s)	456, 1254
KspAI	GTTAAC	1 cut(s)	676
Kzo9I	GATC	9 cut(s)	24, 79, 390, 725, 871, 889, 1213, 1485, 1590
LmnI	GCTCC	5 cut(s)	145, 702, 997, 1056, 1073
Lsp1109I	GCAGC	9 cut(s)	148, 418, 490, 556, 725, 748, 808, 1008, 1460
LweI	GCATC	4 cut(s)	218, 556, 598, 1369
MaeI	CTAG	5 cut(s)	308, 371, 1152, 1470, 1792
MaeII	ACGT	2 cut(s)	66, 661
MaeIII	GTNAC	3 cut(s)	553, 688, 988
MalI	GATC	9 cut(s)	26, 81, 392, 727, 873, 891, 1215, 1487, 1592
MbiI	CCGCTC	1 cut(s)	1195
MboI	GATC	9 cut(s)	24, 79, 390, 725, 871, 889, 1213, 1485, 1590
MfeI	CAATTG	1 cut(s)	492
MflI	RGATCY	2 cut(s)	725, 889
MhlI	GDGCHC	9 cut(s)	47, 142, 340, 585, 699, 1049, 1070, 1405, 1463
MlsI	TGGCCA	1 cut(s)	62
MluCI	AATT	7 cut(s)	14, 492, 518, 708, 1082, 1324, 1490
MluNI	TGGCCA	1 cut(s)	62
MlyI	GAGTC	5 cut(s)	29, 401, 968, 1700, 1781
MmeI	TCCRAC	3 cut(s)	664, 705, 1605
Mox20I	TGGCCA	1 cut(s)	62
MscI	TGGCCA	1 cut(s)	62
MseI	TTAA	3 cut(s)	297, 675, 1637
Msp20I	TGGCCA	1 cut(s)	62
MspA1I	CMGCKG	2 cut(s)	1331, 1414
MspI	CCGG	4 cut(s)	277, 595, 1107, 1428
MspR9I	CCNGG	3 cut(s)	277, 1406, 1429
MunI	CAATTG	1 cut(s)	492
Mva1269I	GAATGC	1 cut(s)	35
MvaI	CCWGG	1 cut(s)	1406
MvnI	CGCG	2 cut(s)	72, 456
NciI	CCSGG	2 cut(s)	277, 1429
NdeII	GATC	9 cut(s)	24, 79, 390, 725, 871, 889, 1213, 1485, 1590
NlaIII	CATG	6 cut(s)	256, 530, 721, 761, 962, 1442
NlaIV	GGNNCC	1 cut(s)	727
NmeAIII	GCCGAG	2 cut(s)	1210, 1294
NmuCI	GTSAC	3 cut(s)	553, 688, 988
NspI	RCATGY	1 cut(s)	761
PaeR7I	CTCGAG	1 cut(s)	333
PagI	TCATGA	1 cut(s)	1438
PceI	AGGCCT	2 cut(s)	1421, 1631
PcsI	WCGNNNNNNNCGW	1 cut(s)	1738
PctI	GAATGC	1 cut(s)	35
PfeI	GAWTC	4 cut(s)	101, 463, 488, 1700
PflFI	GACNNNGTC	1 cut(s)	686
PfoI	TCCNGGA	1 cut(s)	1427
PinAI	ACCGGT	1 cut(s)	1106
Ple19I	CGATCG	1 cut(s)	27
PleI	GAGTC	5 cut(s)	28, 401, 968, 1699, 1780
PpsI	GAGTC	5 cut(s)	28, 401, 968, 1699, 1780
Psp124BI	GAGCTC	6 cut(s)	47, 142, 585, 699, 1049, 1070
Psp1406I	AACGTT	1 cut(s)	661
Psp6I	CCWGG	1 cut(s)	1404
PspEI	GGTNACC	1 cut(s)	553
PspFI	CCCAGC	1 cut(s)	4
PspGI	CCWGG	1 cut(s)	1404
PspN4I	GGNNCC	1 cut(s)	727
PspPI	GGNCC	3 cut(s)	274, 523, 799
PspXI	VCTCGAGB	1 cut(s)	333
PstI	CTGCAG	1 cut(s)	1026
PstNI	CAGNNNCTG	3 cut(s)	104, 268, 1234
PsuI	RGATCY	2 cut(s)	725, 889
PsyI	GACNNNGTC	1 cut(s)	686
PvuI	CGATCG	1 cut(s)	27
PvuII	CAGCTG	1 cut(s)	1414
RsaI	GTAC	4 cut(s)	444, 542, 1410, 1474
RsaNI	GTAC	4 cut(s)	443, 541, 1409, 1473
SacI	GAGCTC	6 cut(s)	47, 142, 585, 699, 1049, 1070
SaqAI	TTAA	3 cut(s)	297, 675, 1637
Sau3AI	GATC	9 cut(s)	24, 79, 390, 725, 871, 889, 1213, 1485, 1590
Sau96I	GGNCC	3 cut(s)	274, 523, 799
ScaI	AGTACT	1 cut(s)	444
SchI	GAGTC	5 cut(s)	29, 401, 968, 1700, 1781
ScrFI	CCNGG	3 cut(s)	277, 1406, 1429
SduI	GDGCHC	9 cut(s)	47, 142, 340, 585, 699, 1049, 1070, 1405, 1463
SfaNI	GCATC	4 cut(s)	218, 556, 598, 1369
SfcI	CTRYAG	1 cut(s)	1022
Sfr274I	CTCGAG	1 cut(s)	333
SinI	GGWCC	1 cut(s)	523
SlaI	CTCGAG	1 cut(s)	333
SmlI	CTYRAG	3 cut(s)	333, 446, 857
SmoI	CTYRAG	3 cut(s)	333, 446, 857
SpeI	ACTAGT	1 cut(s)	1151
Sse9I	AATT	7 cut(s)	14, 492, 518, 708, 1082, 1324, 1490
SseBI	AGGCCT	2 cut(s)	1421, 1631
SsiI	CCGC	6 cut(s)	70, 612, 802, 1195, 1220, 1331
SspMI	CTAG	5 cut(s)	308, 371, 1152, 1470, 1792
SstI	GAGCTC	6 cut(s)	47, 142, 585, 699, 1049, 1070
StuI	AGGCCT	2 cut(s)	1421, 1631
StyD4I	CCNGG	3 cut(s)	275, 1404, 1427
StyI	CCWWGG	2 cut(s)	291, 615
TaaI	ACNGT	3 cut(s)	553, 919, 1759
TaiI	ACGT	2 cut(s)	69, 664
TaqI	TCGA	3 cut(s)	23, 334, 1321
TaqII	GACCGA	1 cut(s)	17
TasI	AATT	7 cut(s)	14, 492, 518, 708, 1082, 1324, 1490
TatI	WGTACW	3 cut(s)	442, 540, 1472
TauI	GCSGC	2 cut(s)	614, 1223
TfiI	GAWTC	4 cut(s)	101, 463, 488, 1700
Tru1I	TTAA	3 cut(s)	297, 675, 1637
Tru9I	TTAA	3 cut(s)	297, 675, 1637
TscAI	CASTG	5 cut(s)	697, 924, 1368, 1600, 1683
TseFI	GTSAC	3 cut(s)	553, 688, 988
TseI	GCWGC	9 cut(s)	161, 431, 503, 569, 713, 736, 821, 1021, 1448
Tsp45I	GTSAC	3 cut(s)	553, 688, 988
TspDTI	ATGAA	5 cut(s)	258, 440, 1020, 1292, 1623
TspRI	CASTG	5 cut(s)	697, 924, 1368, 1600, 1683
Tth111I	GACNNNGTC	1 cut(s)	686
VpaK11BI	GGWCC	1 cut(s)	523
XapI	RAATTY	1 cut(s)	1324
XceI	RCATGY	1 cut(s)	761
XhoI	CTCGAG	1 cut(s)	333
XspI	CTAG	5 cut(s)	308, 371, 1152, 1470, 1792
ZrmI	AGTACT	1 cut(s)	444

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.