Prupe.4G154900_v2.0.a1

oxidoreductase activity

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Reverse (-)
8868789 .. 8870088
1300 bp
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UTR
Exon/CDS
Intron
Prupe.4G154900.1

Sequence Viewer

Length: 492 bp
ATGGAAGGCAAGGAACTGACCAAGTTATTTGAAGATGGAATGCAATCAATGAGGATGAACTATTACCCTCCATGTCCTCTTCCGGCGGAAGTCATCGGTCTTACACCTCGTTCTGATTCTGTAGGTCTCACCATCCTCCTACAAGTGAATGGAATGGATGGTCTCCAAGTAAAGAAAGATGGGATTTGGGTTCCTGTTAAGCCACTACCAGATGCCTTTATTGTCAACATTGGAGACATTTTAGAGATTCAAACAAATGGGATTTATCGAAGCATTGAGCATCGTGCAACAGTTAACTCTATAAAAGAAAGGCTGTCAATCGCCACATTTCACAACCCAGCACTTGATGGTGAAATTGGTCCGGCGTCTAGCTTGGTCACTGAGCAAGCACCTGCAGTATATAAAAGGGTGGAAGTTCAAGATTATGTGAAAGCCCTTTTTGAACGTAAGCTTCAAGGAAAGTCTTTTCTTGATGAACTTAGGATAAAGTAA

Protein Analysis

164

Amino Acids

18.18

Weight (kDa)

5.74

Isoelectric Point (pI)

45.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 400
Acc36I ACCTGC 1 cut(s) 400
AciI CCGC 1 cut(s) 86
AcyI GRCGYC 1 cut(s) 365
AgsI TTSAA 5 cut(s) 32, 251, 419, 443, 455
AluBI AGCT 2 cut(s) 372, 451
AluI AGCT 2 cut(s) 372, 451
Alw26I GTCTC 3 cut(s) 131, 167, 228
AspS9I GGNCC 1 cut(s) 359
AsuHPI GGTGA 2 cut(s) 121, 362
AvaII GGWCC 1 cut(s) 359
BccI CCATC 5 cut(s) 29, 140, 152, 173, 341
BcoDI GTCTC 3 cut(s) 131, 167, 228
BfaI CTAG 1 cut(s) 369
BfmI CTRYAG 2 cut(s) 120, 393
BfuAI ACCTGC 1 cut(s) 400
Bme18I GGWCC 1 cut(s) 359
BmgT120I GGNCC 1 cut(s) 359
BmiI GGNNCC 1 cut(s) 192
BmsI GCATC 2 cut(s) 202, 289
BsaHI GRCGYC 1 cut(s) 365
BsaI GGTCTC 2 cut(s) 131, 167
BseGI GGATG 3 cut(s) 60, 132, 163
BseMII CTCAG 1 cut(s) 372
BseYI CCCAGC 1 cut(s) 337
BsiSI CCGG 2 cut(s) 83, 362
BsmAI GTCTC 3 cut(s) 131, 167, 228
BsmI GAATGC 1 cut(s) 45
Bso31I GGTCTC 2 cut(s) 131, 167
BspACI CCGC 1 cut(s) 86
BspCNI CTCAG 1 cut(s) 373
BspLI GGNNCC 1 cut(s) 192
BspMAI CTGCAG 1 cut(s) 397
BspMI ACCTGC 1 cut(s) 400
BspTNI GGTCTC 2 cut(s) 131, 167
BssNI GRCGYC 1 cut(s) 365
Bst4CI ACNGT 1 cut(s) 292
Bst6I CTCTTC 1 cut(s) 84
BstACI GRCGYC 1 cut(s) 365
BstC8I GCNNGC 1 cut(s) 387
BstDEI CTNAG 2 cut(s) 381, 479
BstF5I GGATG 3 cut(s) 60, 132, 163
BstMAI GTCTC 3 cut(s) 131, 167, 228
BstSFI CTRYAG 2 cut(s) 120, 393
BtsCI GGATG 3 cut(s) 60, 132, 163
BtsIMutI CAGTG 1 cut(s) 378
BveI ACCTGC 1 cut(s) 400
Cac8I GCNNGC 1 cut(s) 387
Cfr13I GGNCC 1 cut(s) 359
CseI GACGC 1 cut(s) 354
CviAII CATG 1 cut(s) 72
CviJI RGCY 5 cut(s) 202, 313, 372, 434, 451
CviKI_1 RGCY 5 cut(s) 202, 313, 372, 434, 451
DdeI CTNAG 2 cut(s) 381, 479
Eam1104I CTCTTC 1 cut(s) 84
EarI CTCTTC 1 cut(s) 84
EciI GGCGGA 1 cut(s) 101
Eco31I GGTCTC 2 cut(s) 131, 167
Eco47I GGWCC 1 cut(s) 359
FaeI CATG 1 cut(s) 75
FaiI YATR 5 cut(s) 73, 302, 400, 402, 426
FatI CATG 1 cut(s) 71
FokI GGATG 3 cut(s) 67, 119, 170
FspBI CTAG 1 cut(s) 369
GsaI CCCAGC 1 cut(s) 341
HapII CCGG 2 cut(s) 83, 362
HgaI GACGC 1 cut(s) 354
Hin1I GRCGYC 1 cut(s) 365
Hin1II CATG 1 cut(s) 75
HincII GTYRAC 2 cut(s) 226, 295
HindII GTYRAC 2 cut(s) 226, 295
HindIII AAGCTT 1 cut(s) 449
HinfI GANTC 2 cut(s) 116, 247
HpaI GTTAAC 1 cut(s) 295
HpaII CCGG 2 cut(s) 83, 362
HphI GGTGA 2 cut(s) 121, 362
Hpy166II GTNNAC 2 cut(s) 226, 295
Hpy188I TCNGA 1 cut(s) 115
Hpy188III TCNNGA 2 cut(s) 419, 470
Hpy8I GTNNAC 2 cut(s) 226, 295
HpyCH4III ACNGT 1 cut(s) 292
HpyCH4IV ACGT 1 cut(s) 445
HpyCH4V TGCA 3 cut(s) 43, 287, 395
HpyF3I CTNAG 2 cut(s) 381, 479
HpySE526I ACGT 1 cut(s) 445
Hsp92I GRCGYC 1 cut(s) 365
Hsp92II CATG 1 cut(s) 75
KspAI GTTAAC 1 cut(s) 295
LpnPI CCDG 6 cut(s) 96, 207, 222, 351, 375, 405
LweI GCATC 2 cut(s) 202, 289
MaeI CTAG 1 cut(s) 369
MaeII ACGT 1 cut(s) 445
MaeIII GTNAC 1 cut(s) 376
MboII GAAGA 2 cut(s) 44, 71
MluCI AATT 1 cut(s) 354
MnlI CCTC 5 cut(s) 45, 78, 87, 117, 146
MseI TTAA 2 cut(s) 198, 294
MspI CCGG 2 cut(s) 83, 362
Mva1269I GAATGC 1 cut(s) 45
NlaIII CATG 1 cut(s) 75
NlaIV GGNNCC 1 cut(s) 192
NmuCI GTSAC 1 cut(s) 376
PaqCI CACCTGC 1 cut(s) 400
PctI GAATGC 1 cut(s) 45
PfeI GAWTC 2 cut(s) 116, 247
PspFI CCCAGC 1 cut(s) 337
PspN4I GGNNCC 1 cut(s) 192
PspPI GGNCC 1 cut(s) 359
PstI CTGCAG 1 cut(s) 397
SaqAI TTAA 2 cut(s) 198, 294
Sau96I GGNCC 1 cut(s) 359
SetI ASST 6 cut(s) 109, 127, 374, 394, 448, 453
SfaNI GCATC 2 cut(s) 202, 289
SfcI CTRYAG 2 cut(s) 120, 393
SinI GGWCC 1 cut(s) 359
Sse9I AATT 1 cut(s) 354
SsiI CCGC 1 cut(s) 86
SspMI CTAG 1 cut(s) 369
TaaI ACNGT 1 cut(s) 292
TaiI ACGT 1 cut(s) 448
TaqI TCGA 1 cut(s) 268
TaqII GACCGA 1 cut(s) 86
TasI AATT 1 cut(s) 354
TfiI GAWTC 2 cut(s) 116, 247
Tru1I TTAA 2 cut(s) 198, 294
Tru9I TTAA 2 cut(s) 198, 294
TscAI CASTG 1 cut(s) 385
TseFI GTSAC 1 cut(s) 376
Tsp45I GTSAC 1 cut(s) 376
TspDTI ATGAA 2 cut(s) 71, 489
TspRI CASTG 1 cut(s) 385
VpaK11BI GGWCC 1 cut(s) 359
XspI CTAG 1 cut(s) 369
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.