Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0001759

Physical Location & Seq

Genomic Coordinates Forward (+)

30508450 .. 30511005

Gene Structure 2556 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1164700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1554 bp

ATGGCTATTCTAGCACTTGTGTTTGAGCAGCTGCAGAAGAATGTCTTTCTTCTTCCTCTTATCATACTTTCTGCATTCATTATGTTTTCTCTTACTAAATCATCGTCCAATGGCGATGAGAAACGAAAACTCAAGTTACCACCTTCCCCACCAAGGTTGCCATTGATTGGAAACCTTCACCAGTTAGGCACATTCCCACATCAATCTCTCCATGCTCTCTCGAAAAAGTATGGCGATTTAATGCTGGTGCACCTTGGGAAAGTTCCGACTTTGATCGTTTCATCTGCAGAGATGGCCAAGGAGGTGATGAAGACGCAGGACATTGCTTTCTGCAGCCGGCCAAAAGCCACTGCTCCGGGAATATTGTTCTATGACGCTCATGATATCGCGTTTGCTCCTTACGGAGAGTACTGGAGGCAAGTTCGGAAAATATGTGTTCTTGAGCTTCTGAGTCTTAAGAGGGTGTCACAGTTTCAGTACGCGAGGGTGGAAGAGGTTTCGGAGTTGGTCGAGAAGATTCGCAAAGCGTCGAGCCTCAATGGCGGAGGTCCTATTGTTCTGAGTGATCTGCTGGTGGCAACCTCCAACAACATTATCTGCAGGTGTATTCTCGGACAGAAGTTTGAGGGCGAGGAGAACAAGTGGTTTGGAGAGGTGACAAAAGATTTGATGTGCCAACTCATGAGTTTCAGTTTTACGGATTACTTTGGTCCGAGGATGAATTGGCTCGACCGTGCCAGTGGCCACATTAAACATTTGACATCGATTTGGTCCGAGTTTGATAGGTTTTTCGACAAGTTGATTGCCGAACATCAGGCGGCAGAGAAAGAAGGCAAGCCTCGCAAGAAGGACTTCGTGGATATTCTCCTCCAAGTTCAAAAGGAGGGCAATGACTTCGAGCTCAAAAGTGACCACCTCAAAGCACTTCTGCAGGACATGTTTGTTGGAGGAAGTGATACTAGTTGGACTGCCATGATATGGTTGATGACAGAGCTTGCGAAGAATCCACGCGTGATGAAGAAAGTCCAGGAAGAGGTAAGAAGGGTGGTGGGGAACAAGGGATATGTAGATGAGAATGTTGACACCCCCCAAATGACCTACATGATATGTTGCATCAAAGAAAATATGAGAGTTCATCCTCCGGCGCCTCTTTTACTTCCTCGCGAAACAAGTACAGACGTGAAATTGGGACCCTACAACATCCCTGCGAAAACACAGGTGTTTGTGAGCGCATACTCGGTACAAAGGGACCCCAAAGTCTGGGACAACCCCGATGAGTTTTACCCCGAGAGGTTCGAGGAGAAGAACGTTGGTTTCGTGGGTCAGGAGTTTGAACTCATCCCGTTCGGTGCTGGGAGAAGGGTGTGCCCTGGACTCGGCTTTGGGGTTGCTTCTGCTGAATATGTGCTTTCCAACCTTCTGTATTGGTTTGATTGGAAACTGCCTAGTGGTGGTAAGGAATTGGCCGAGACCATGGACACCGATGAAGTTTACGGACTCACAGTCCACAAGAAAGCTTCTCTTAACCTTATCCCGGTCCCATACAACCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0008150 GO:0008152 GO:0009058 GO:0012505 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0031090 GO:0031984 GO:0042175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0044550 GO:0055114 GO:0098827

KEGG Pathways

Metabolic & Signaling

ko00140 ko00380 ko00460 ko00590 ko00591 ko00830 ko00980 ko01100 ko01110 ko04212 ko04726 ko04750 ko04913 ko04917 ko04927 ko04934 ko05204 map00140 map00380 map00460 map00590 map00591 map00830 map00980 map01100 map01110 map04212 map04726 map04750 map04913 map04917 map04927 map04934 map05204

Pfam Domains

Protein Families

p450

Protein Analysis

518

Amino Acids

58.62

Weight (kDa)

7.16

Isoelectric Point (pI)

32.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	47 - 489	1.3e-102	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001759)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g17450 FvH4_5g06440 FvH4_5g06460
malus_domestica	MD00G1167000.v1.1 MD06G1164400.v1.1 MD06G1164700.v1.1 MD14G1169200.v1.1 MD14G1169600.v1.1 MD14G1169700.v1.1
prunus_persica	Prupe.3G184200_v2.0.a1 Prupe.5G163700_v2.0.a1 Prupe.5G163800_v2.0.a1 Prupe.5G164000_v2.0.a1 Prupe.5G164100_v2.0.a1
pyrus_communis	pycom06g14730 pycom14g14150
rosa_chinensis	RchiOBHm_Chr1g0314001 RchiOBHm_Chr4g0420441 RchiOBHm_Chr5g0028981 RchiOBHm_Chr7g0192271 RchiOBHm_Chr7g0192301 RchiOBHm_Chr7g0233491
rosa_laevigata	RLG00000004378 RLG00000004380 RLG00000007763 RLG00000033133
rosa_multiflora	Rmu_sc0001559.1_g000001 Rmu_sc0009042.1_g000004
rosa_roxburghii	Rroxscaffold_1G00050910 Rroxscaffold_3G00263130
rosa_rugosa	Rorug03G0295500 Rorug05G0112200 Rorug07G0000300 Rorug07G0000400
rosa_samantha	Rh4AG225500 Rh5AG204200 Rh5CG223300 Rh7AG124500 Rh7AG124700 Rh7BG126300 Rh7BG126500 Rh7DG128100 Rh7DG128300
rosa_wichuraiana	Rw0G008520 Rw4G011870 Rw5G018510 Rw7G010670 Rw7G010700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	591
AasI	GACNNNNNNGTC	1 cut(s)	1256
Acc36I	ACCTGC	1 cut(s)	591
AccB1I	GGYRCC	1 cut(s)	1144
AccB7I	CCANNNNNTGG	3 cut(s)	167, 978, 1260
AccII	CGCG	4 cut(s)	389, 482, 1011, 1164
AciI	CCGC	2 cut(s)	543, 818
AclI	AACGTT	1 cut(s)	1308
AcoI	YGGCCR	4 cut(s)	294, 338, 742, 1464
AcyI	GRCGYC	1 cut(s)	1145
AfaI	GTAC	4 cut(s)	410, 479, 1174, 1242
AfiI	CCNNNNNNNGG	8 cut(s)	153, 167, 978, 1033, 1260, 1376, 1451, 1534
AflII	CTTAAG	1 cut(s)	455
AflIII	ACRYGT	2 cut(s)	936, 1009
AgsI	TTSAA	2 cut(s)	878, 1334
AhdI	GACNNNNNGTC	1 cut(s)	1502
AhlI	ACTAGT	1 cut(s)	959
AjiI	CACGTC	1 cut(s)	1180
AjnI	CCWGG	2 cut(s)	1026, 1369
AluBI	AGCT	5 cut(s)	31, 445, 901, 994, 1517
AluI	AGCT	5 cut(s)	31, 445, 901, 994, 1517
Alw21I	GWGCWC	2 cut(s)	252, 903
Alw26I	GTCTC	1 cut(s)	1463
Alw44I	GTGCAC	1 cut(s)	248
Ama87I	CYCGRG	1 cut(s)	1286
AoxI	GGCC	4 cut(s)	294, 338, 742, 1464
ApaLI	GTGCAC	1 cut(s)	248
ApeKI	GCWGC	3 cut(s)	28, 31, 333
ArsI	GACNNNNNNTTYG	2 cut(s)	649, 681
Asp700I	GAANNNNTTC	1 cut(s)	851
AspLEI	GCGC	2 cut(s)	1147, 1232
AspS9I	GGNCC	6 cut(s)	548, 710, 771, 1190, 1249, 1537
AsuC2I	CCSGG	2 cut(s)	357, 1535
AsuHPI	GGTGA	3 cut(s)	170, 316, 667
AvaI	CYCGRG	1 cut(s)	1286
AvaII	GGWCC	6 cut(s)	548, 710, 771, 1190, 1249, 1537
BaeGI	GKGCMC	2 cut(s)	252, 1370
BalI	TGGCCA	2 cut(s)	296, 744
BanI	GGYRCC	1 cut(s)	1144
BanII	GRGCYC	1 cut(s)	903
BbsI	GAAGAC	1 cut(s)	317
Bbv12I	GWGCWC	2 cut(s)	252, 903
BbvI	GCAGC	3 cut(s)	18, 40, 345
BccI	CCATC	1 cut(s)	286
BcgI	CGANNNNNNTGC	2 cut(s)	877, 911
BciT130I	CCWGG	2 cut(s)	1028, 1371
BcnI	CCSGG	2 cut(s)	357, 1535
BcoDI	GTCTC	1 cut(s)	1463
BcuI	ACTAGT	1 cut(s)	959
BfaI	CTAG	3 cut(s)	11, 960, 1446
BfmI	CTRYAG	5 cut(s)	32, 285, 331, 598, 929
BfoI	RGCGCY	1 cut(s)	1148
BfrI	CTTAAG	1 cut(s)	455
BfuAI	ACCTGC	1 cut(s)	591
BglI	GCCNNNNNGGC	1 cut(s)	540
BisI	GCNGC	4 cut(s)	29, 32, 334, 819
BlsI	GCNGC	4 cut(s)	30, 33, 335, 820
BmcAI	AGTACT	1 cut(s)	410
Bme1390I	CCNGG	4 cut(s)	357, 1028, 1371, 1535
Bme18I	GGWCC	6 cut(s)	548, 710, 771, 1190, 1249, 1537
BmeRI	GACNNNNNGTC	1 cut(s)	1502
BmeT110I	CYCGRG	1 cut(s)	1286
BmgBI	CACGTC	1 cut(s)	1180
BmgT120I	GGNCC	6 cut(s)	548, 710, 771, 1190, 1249, 1537
BmiI	GGNNCC	6 cut(s)	1146, 1191, 1192, 1250, 1251, 1539
BmrFI	CCNGG	4 cut(s)	357, 1028, 1371, 1535
BmsI	GCATC	1 cut(s)	1122
BpiI	GAAGAC	1 cut(s)	317
BpmI	CTGGAG	1 cut(s)	433
BpuEI	CTTGAG	2 cut(s)	116, 461
BpuMI	CCSGG	2 cut(s)	357, 1535
Bsa29I	ATCGAT	1 cut(s)	764
BsaHI	GRCGYC	1 cut(s)	1145
BsaI	GGTCTC	1 cut(s)	1463
BsaJI	CCNNGG	6 cut(s)	152, 253, 297, 713, 1369, 1473
BsaXI	ACNNNNNCTCC	2 cut(s)	626, 656
Bsc4I	CCNNNNNNNGG	8 cut(s)	153, 167, 978, 1033, 1260, 1376, 1451, 1534
Bse118I	RCCGGY	1 cut(s)	336
Bse1I	ACTGG	3 cut(s)	181, 416, 738
Bse3DI	GCAATG	2 cut(s)	321, 895
BseBI	CCWGG	2 cut(s)	1028, 1371
BseCI	ATCGAT	1 cut(s)	764
BseDI	CCNNGG	6 cut(s)	152, 253, 297, 713, 1369, 1473
BseGI	GGATG	4 cut(s)	723, 1135, 1200, 1338
BseLI	CCNNNNNNNGG	8 cut(s)	153, 167, 978, 1033, 1260, 1376, 1451, 1534
BseMI	GCAATG	2 cut(s)	321, 895
BseMII	CTCAG	2 cut(s)	440, 551
BseNI	ACTGG	3 cut(s)	181, 416, 738
BseRI	GAGGAG	3 cut(s)	647, 857, 1313
BseSI	GKGCMC	2 cut(s)	252, 1370
BseXI	GCAGC	3 cut(s)	18, 40, 345
BseYI	CCCAGC	1 cut(s)	1352
Bsh1236I	CGCG	4 cut(s)	389, 482, 1011, 1164
Bsh1285I	CGRYCG	1 cut(s)	733
BshFI	GGCC	4 cut(s)	296, 340, 744, 1466
BshNI	GGYRCC	1 cut(s)	1144
BshVI	ATCGAT	1 cut(s)	764
BsiEI	CGRYCG	1 cut(s)	733
BsiHKAI	GWGCWC	2 cut(s)	252, 903
BsiHKCI	CYCGRG	1 cut(s)	1286
BsiSI	CCGG	4 cut(s)	337, 356, 1142, 1535
BslFI	GGGAC	4 cut(s)	1203, 1262, 1277, 1523
BslI	CCNNNNNNNGG	8 cut(s)	153, 167, 978, 1033, 1260, 1376, 1451, 1534
BsmAI	GTCTC	1 cut(s)	1463
BsmFI	GGGAC	4 cut(s)	1203, 1262, 1277, 1523
BsmI	GAATGC	1 cut(s)	74
BsnI	GGCC	4 cut(s)	296, 340, 744, 1466
Bso31I	GGTCTC	1 cut(s)	1463
BsoBI	CYCGRG	1 cut(s)	1286
Bsp1286I	GDGCHC	3 cut(s)	252, 903, 1370
Bsp143I	GATC	2 cut(s)	273, 565
Bsp19I	CCATGG	1 cut(s)	1473
Bsp68I	TCGCGA	1 cut(s)	1164
BspACI	CCGC	2 cut(s)	543, 818
BspANI	GGCC	4 cut(s)	296, 340, 744, 1466
BspCNI	CTCAG	2 cut(s)	441, 552
BspDI	ATCGAT	1 cut(s)	764
BspFNI	CGCG	4 cut(s)	389, 482, 1011, 1164
BspHI	TCATGA	2 cut(s)	379, 681
BspLI	GGNNCC	6 cut(s)	1146, 1191, 1192, 1250, 1251, 1539
BspMAI	CTGCAG	5 cut(s)	36, 289, 335, 602, 933
BspMI	ACCTGC	1 cut(s)	591
BspT107I	GGYRCC	1 cut(s)	1144
BspTI	CTTAAG	1 cut(s)	455
BspTNI	GGTCTC	1 cut(s)	1463
BsrDI	GCAATG	2 cut(s)	321, 895
BsrFI	RCCGGY	1 cut(s)	336
BsrI	ACTGG	3 cut(s)	181, 416, 738
BssAI	RCCGGY	1 cut(s)	336
BssECI	CCNNGG	6 cut(s)	152, 253, 297, 713, 1369, 1473
BssMI	GATC	2 cut(s)	273, 565
BssNI	GRCGYC	1 cut(s)	1145
BssT1I	CCWWGG	4 cut(s)	152, 253, 297, 1473
Bst2UI	CCWGG	2 cut(s)	1028, 1371
Bst4CI	ACNGT	3 cut(s)	471, 734, 1504
Bst6I	CTCTTC	2 cut(s)	486, 1026
BstACI	GRCGYC	1 cut(s)	1145
BstAFI	CTTAAG	1 cut(s)	455
BstC8I	GCNNGC	3 cut(s)	338, 836, 996
BstDEI	CTNAG	2 cut(s)	449, 560
BstDSI	CCRYGG	1 cut(s)	1473
BstF5I	GGATG	4 cut(s)	723, 1135, 1200, 1338
BstFNI	CGCG	4 cut(s)	389, 482, 1011, 1164
BstH2I	RGCGCY	1 cut(s)	1148
BstHHI	GCGC	2 cut(s)	1147, 1232
BstKTI	GATC	2 cut(s)	276, 568
BstMAI	GTCTC	1 cut(s)	1463
BstMBI	GATC	2 cut(s)	273, 565
BstMCI	CGRYCG	1 cut(s)	733
BstMWI	GCNNNNNNNGC	4 cut(s)	11, 293, 540, 840
BstNI	CCWGG	2 cut(s)	1028, 1371
BstNSI	RCATGY	1 cut(s)	940
BstSCI	CCNGG	4 cut(s)	355, 1026, 1369, 1533
BstSFI	CTRYAG	5 cut(s)	32, 285, 331, 598, 929
BstSLI	GKGCMC	2 cut(s)	252, 1370
BstUI	CGCG	4 cut(s)	389, 482, 1011, 1164
BstV1I	GCAGC	3 cut(s)	18, 40, 345
BstV2I	GAAGAC	1 cut(s)	317
Bsu15I	ATCGAT	1 cut(s)	764
BsuRI	GGCC	4 cut(s)	296, 340, 744, 1466
BsuTUI	ATCGAT	1 cut(s)	764
BtgI	CCRYGG	1 cut(s)	1473
BtgZI	GCGATG	1 cut(s)	129
BtrI	CACGTC	1 cut(s)	1180
BtsCI	GGATG	4 cut(s)	723, 1135, 1200, 1338
BtsI	GCAGTG	1 cut(s)	348
BtsIMutI	CAGTG	2 cut(s)	348, 745
BtuMI	TCGCGA	1 cut(s)	1164
BveI	ACCTGC	1 cut(s)	591
Cac8I	GCNNGC	3 cut(s)	338, 836, 996
CciI	TCATGA	2 cut(s)	379, 681
CfoI	GCGC	2 cut(s)	1147, 1232
Cfr10I	RCCGGY	1 cut(s)	336
Cfr13I	GGNCC	6 cut(s)	548, 710, 771, 1190, 1249, 1537
ClaI	ATCGAT	1 cut(s)	764
CseI	GACGC	3 cut(s)	322, 383, 516
Csp6I	GTAC	4 cut(s)	409, 478, 1173, 1241
CspCI	CAANNNNNGTGG	2 cut(s)	138, 173
CviAII	CATG	7 cut(s)	212, 380, 682, 937, 973, 1102, 1474
CviQI	GTAC	4 cut(s)	409, 478, 1173, 1241
DdeI	CTNAG	2 cut(s)	449, 560
DinI	GGCGCC	1 cut(s)	1146
DpnI	GATC	2 cut(s)	275, 567
DpnII	GATC	2 cut(s)	273, 565
DrdI	GACNNNNNNGTC	1 cut(s)	1256
DriI	GACNNNNNGTC	1 cut(s)	1502
DseDI	GACNNNNNNGTC	1 cut(s)	1256
EaeI	YGGCCR	4 cut(s)	294, 338, 742, 1464
Eam1104I	CTCTTC	2 cut(s)	486, 1026
Eam1105I	GACNNNNNGTC	1 cut(s)	1502
EarI	CTCTTC	2 cut(s)	486, 1026
EciI	GGCGGA	1 cut(s)	558
Ecl136II	GAGCTC	1 cut(s)	901
Eco130I	CCWWGG	4 cut(s)	152, 253, 297, 1473
Eco24I	GRGCYC	1 cut(s)	903
Eco31I	GGTCTC	1 cut(s)	1463
Eco32I	GATATC	1 cut(s)	385
Eco47I	GGWCC	6 cut(s)	548, 710, 771, 1190, 1249, 1537
Eco53kI	GAGCTC	1 cut(s)	901
Eco88I	CYCGRG	1 cut(s)	1286
EcoICRI	GAGCTC	1 cut(s)	901
EcoO109I	RGGNCCY	3 cut(s)	548, 1190, 1249
EcoRII	CCWGG	2 cut(s)	1026, 1369
EcoRV	GATATC	1 cut(s)	385
EcoT14I	CCWWGG	4 cut(s)	152, 253, 297, 1473
EcoT38I	GRGCYC	1 cut(s)	903
EgeI	GGCGCC	1 cut(s)	1146
EheI	GGCGCC	1 cut(s)	1146
ErhI	CCWWGG	4 cut(s)	152, 253, 297, 1473
FaeI	CATG	7 cut(s)	215, 383, 685, 940, 976, 1105, 1477
FalI	AAGNNNNNCTT	6 cut(s)	29, 61, 836, 868, 1506, 1538
FaqI	GGGAC	4 cut(s)	1203, 1262, 1277, 1523
FatI	CATG	7 cut(s)	211, 379, 681, 936, 972, 1101, 1473
Fnu4HI	GCNGC	4 cut(s)	29, 32, 334, 819
FokI	GGATG	4 cut(s)	730, 1122, 1187, 1325
FriOI	GRGCYC	1 cut(s)	903
Fsp4HI	GCNGC	4 cut(s)	29, 32, 334, 819
FspBI	CTAG	3 cut(s)	11, 960, 1446
GlaI	GCGC	2 cut(s)	1146, 1231
GluI	GCNGC	4 cut(s)	29, 32, 334, 819
GsaI	CCCAGC	1 cut(s)	1356
GsuI	CTGGAG	1 cut(s)	433
HaeII	RGCGCY	1 cut(s)	1148
HaeIII	GGCC	4 cut(s)	296, 340, 744, 1466
HapII	CCGG	4 cut(s)	337, 356, 1142, 1535
HgaI	GACGC	3 cut(s)	322, 383, 516
HhaI	GCGC	2 cut(s)	1147, 1232
Hin1I	GRCGYC	1 cut(s)	1145
Hin1II	CATG	7 cut(s)	215, 383, 685, 940, 976, 1105, 1477
Hin6I	GCGC	2 cut(s)	1145, 1230
HinP1I	GCGC	2 cut(s)	1145, 1230
HincII	GTYRAC	1 cut(s)	1081
HindII	GTYRAC	1 cut(s)	1081
HindIII	AAGCTT	1 cut(s)	1515
HinfI	GANTC	5 cut(s)	451, 517, 1003, 1374, 1497
HpaII	CCGG	4 cut(s)	337, 356, 1142, 1535
HphI	GGTGA	3 cut(s)	170, 316, 667
Hpy166II	GTNNAC	4 cut(s)	250, 1081, 1492, 1507
Hpy188I	TCNGA	8 cut(s)	267, 426, 450, 502, 561, 614, 714, 775
Hpy188III	TCNNGA	7 cut(s)	220, 380, 440, 511, 682, 1163, 1325
Hpy8I	GTNNAC	4 cut(s)	250, 1081, 1492, 1507
Hpy99I	CGWCG	1 cut(s)	532
HpyAV	CCTTC	7 cut(s)	153, 185, 824, 841, 1035, 1353, 1427
HpyCH4III	ACNGT	3 cut(s)	471, 734, 1504
HpyCH4IV	ACGT	2 cut(s)	1179, 1308
HpyCH4V	TGCA	8 cut(s)	34, 74, 250, 287, 333, 600, 931, 1113
HpyF10VI	GCNNNNNNNGC	4 cut(s)	11, 293, 540, 840
HpyF3I	CTNAG	2 cut(s)	449, 560
HpySE526I	ACGT	2 cut(s)	1179, 1308
Hsp92I	GRCGYC	1 cut(s)	1145
Hsp92II	CATG	7 cut(s)	215, 383, 685, 940, 976, 1105, 1477
HspAI	GCGC	2 cut(s)	1145, 1230
KasI	GGCGCC	1 cut(s)	1144
KflI	GGGWCCC	2 cut(s)	1190, 1249
KroI	GCCGGC	1 cut(s)	336
KroNI	GCCGGC	1 cut(s)	338
Kzo9I	GATC	2 cut(s)	273, 565
LmnI	GCTCC	2 cut(s)	358, 400
Lsp1109I	GCAGC	3 cut(s)	18, 40, 345
LweI	GCATC	1 cut(s)	1122
MaeI	CTAG	3 cut(s)	11, 960, 1446
MaeII	ACGT	2 cut(s)	1179, 1308
MaeIII	GTNAC	4 cut(s)	135, 465, 655, 908
MalI	GATC	2 cut(s)	275, 567
MboI	GATC	2 cut(s)	273, 565
MhlI	GDGCHC	3 cut(s)	252, 903, 1370
MlsI	TGGCCA	2 cut(s)	296, 744
MluCI	AATT	3 cut(s)	721, 1184, 1460
MluI	ACGCGT	1 cut(s)	1009
MluNI	TGGCCA	2 cut(s)	296, 744
Mly113I	GGCGCC	1 cut(s)	1145
MlyI	GAGTC	3 cut(s)	460, 1368, 1491
MmeI	TCCRAC	5 cut(s)	290, 609, 925, 944, 1437
Mox20I	TGGCCA	2 cut(s)	296, 744
MroNI	GCCGGC	1 cut(s)	336
MroXI	GAANNNNTTC	1 cut(s)	851
MscI	TGGCCA	2 cut(s)	296, 744
MseI	TTAA	4 cut(s)	239, 456, 750, 1524
Msp20I	TGGCCA	2 cut(s)	296, 744
MspA1I	CMGCKG	1 cut(s)	31
MspCI	CTTAAG	1 cut(s)	455
MspI	CCGG	4 cut(s)	337, 356, 1142, 1535
MspR9I	CCNGG	4 cut(s)	357, 1028, 1371, 1535
Mva1269I	GAATGC	1 cut(s)	74
MvaI	CCWGG	2 cut(s)	1028, 1371
MvnI	CGCG	4 cut(s)	389, 482, 1011, 1164
MwoI	GCNNNNNNNGC	4 cut(s)	11, 293, 540, 840
NaeI	GCCGGC	1 cut(s)	338
NarI	GGCGCC	1 cut(s)	1145
NciI	CCSGG	2 cut(s)	357, 1535
NcoI	CCATGG	1 cut(s)	1473
NdeII	GATC	2 cut(s)	273, 565
NgoMIV	GCCGGC	1 cut(s)	336
NlaIII	CATG	7 cut(s)	215, 383, 685, 940, 976, 1105, 1477
NlaIV	GGNNCC	6 cut(s)	1146, 1191, 1192, 1250, 1251, 1539
NmeAIII	GCCGAG	2 cut(s)	1356, 1492
NmuCI	GTSAC	3 cut(s)	465, 655, 908
NruI	TCGCGA	1 cut(s)	1164
NspI	RCATGY	1 cut(s)	940
PagI	TCATGA	2 cut(s)	379, 681
PaqCI	CACCTGC	1 cut(s)	591
PciI	ACATGT	1 cut(s)	936
PcsI	WCGNNNNNNNCGW	1 cut(s)	1314
PctI	GAATGC	1 cut(s)	74
PdiI	GCCGGC	1 cut(s)	338
PdmI	GAANNNNTTC	1 cut(s)	851
PfeI	GAWTC	2 cut(s)	517, 1003
PflMI	CCANNNNNTGG	3 cut(s)	167, 978, 1260
PfoI	TCCNGGA	2 cut(s)	355, 1026
PkrI	GCNGC	4 cut(s)	30, 33, 335, 820
PleI	GAGTC	3 cut(s)	459, 1368, 1491
PluTI	GGCGCC	1 cut(s)	1148
PpsI	GAGTC	3 cut(s)	459, 1368, 1491
PpuMI	RGGWCCY	3 cut(s)	548, 1190, 1249
PscI	ACATGT	1 cut(s)	936
Psp124BI	GAGCTC	1 cut(s)	903
Psp1406I	AACGTT	1 cut(s)	1308
Psp5II	RGGWCCY	3 cut(s)	548, 1190, 1249
Psp6I	CCWGG	2 cut(s)	1026, 1369
PspFI	CCCAGC	1 cut(s)	1352
PspGI	CCWGG	2 cut(s)	1026, 1369
PspN4I	GGNNCC	6 cut(s)	1146, 1191, 1192, 1250, 1251, 1539
PspPI	GGNCC	6 cut(s)	548, 710, 771, 1190, 1249, 1537
PspPPI	RGGWCCY	3 cut(s)	548, 1190, 1249
PstI	CTGCAG	5 cut(s)	36, 289, 335, 602, 933
PvuII	CAGCTG	1 cut(s)	31
RruI	TCGCGA	1 cut(s)	1164
RsaI	GTAC	4 cut(s)	410, 479, 1174, 1242
RsaNI	GTAC	4 cut(s)	409, 478, 1173, 1241
SacI	GAGCTC	1 cut(s)	903
SaqAI	TTAA	4 cut(s)	239, 456, 750, 1524
SatI	GCNGC	4 cut(s)	29, 32, 334, 819
Sau3AI	GATC	2 cut(s)	273, 565
Sau96I	GGNCC	6 cut(s)	548, 710, 771, 1190, 1249, 1537
ScaI	AGTACT	1 cut(s)	410
SchI	GAGTC	3 cut(s)	460, 1368, 1491
ScrFI	CCNGG	4 cut(s)	357, 1028, 1371, 1535
SduI	GDGCHC	3 cut(s)	252, 903, 1370
SfaNI	GCATC	1 cut(s)	1122
SfcI	CTRYAG	5 cut(s)	32, 285, 331, 598, 929
SfoI	GGCGCC	1 cut(s)	1146
SinI	GGWCC	6 cut(s)	548, 710, 771, 1190, 1249, 1537
SmlI	CTYRAG	3 cut(s)	131, 440, 455
SmoI	CTYRAG	3 cut(s)	131, 440, 455
SpeI	ACTAGT	1 cut(s)	959
Sse9I	AATT	3 cut(s)	721, 1184, 1460
SsiI	CCGC	2 cut(s)	543, 818
SspDI	GGCGCC	1 cut(s)	1144
SspI	AATATT	1 cut(s)	363
SspMI	CTAG	3 cut(s)	11, 960, 1446
SstI	GAGCTC	1 cut(s)	903
StyD4I	CCNGG	4 cut(s)	355, 1026, 1369, 1533
StyI	CCWWGG	4 cut(s)	152, 253, 297, 1473
TaaI	ACNGT	3 cut(s)	471, 734, 1504
TaiI	ACGT	2 cut(s)	1182, 1311
TaqI	TCGA	8 cut(s)	221, 510, 530, 729, 764, 792, 897, 1296
TasI	AATT	3 cut(s)	721, 1184, 1460
TatI	WGTACW	2 cut(s)	408, 1172
TauI	GCSGC	1 cut(s)	821
TfiI	GAWTC	2 cut(s)	517, 1003
Tru1I	TTAA	4 cut(s)	239, 456, 750, 1524
Tru9I	TTAA	4 cut(s)	239, 456, 750, 1524
TscAI	CASTG	2 cut(s)	355, 745
TseFI	GTSAC	3 cut(s)	465, 655, 908
TseI	GCWGC	3 cut(s)	28, 31, 333
Tsp45I	GTSAC	3 cut(s)	465, 655, 908
TspDTI	ATGAA	7 cut(s)	67, 270, 323, 734, 1031, 1124, 1500
TspGWI	ACGGA	3 cut(s)	417, 713, 1509
TspRI	CASTG	2 cut(s)	355, 745
Van91I	CCANNNNNTGG	3 cut(s)	167, 978, 1260
Vha464I	CTTAAG	1 cut(s)	455
VneI	GTGCAC	1 cut(s)	248
VpaK11BI	GGWCC	6 cut(s)	548, 710, 771, 1190, 1249, 1537
XceI	RCATGY	1 cut(s)	940
XmnI	GAANNNNTTC	1 cut(s)	851
XspI	CTAG	3 cut(s)	11, 960, 1446
ZrmI	AGTACT	1 cut(s)	410

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.