RLG00000033133

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
23665190 .. 23667180
1991 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000033133

Sequence Viewer

Length: 1545 bp
ATGGCTCTATTACCATGTTTGAATCAACTGGGGCAAGAGCTACAAACGATCACCACTCCCTTCAATCTTTTCTTGGTTTCTCTCCTCTCGCTTTCCATATTCATTTTGTTTTCATTTTCCGGATCAGGTTCGAAACTCAAGTTACCGCCATGTCCAACAAGGTTGCCACTAATTGGAAACCTCCACCAGCTAGGCACACTCCCACACCGCTCTCTTGGCAATCTGTCTAAGAAGTATGGCCCTCTAATGCTACTTCATTTGGGCCTAGTTCCAACACTAGTAGTTTCATCAGCAGAAATGGCCAAGGAAGTCATGAAGACCCATGATACTGTTTTCTCCAGCCGTCCCAAATCTACAGCTGCAAACATATTAGTCTATGGATGCCGCGACATCGGCTTTGCTCCTTATGGGGAGTACTGGAGACAAGTTCGGAAACTTTGTGTTCTTGAACTTCTCAGCCTCAAAAGGGTGCAACAATTTCAGTATGCAAGAGAAGAAGAAATTGGGGAGTTGGTAAACAGGATAAGAAAAGCGTGCCTCGGCCAGTCTCCTATTAATCTAAGTGAGATGCTGATAAAAGCCTCCAACAACATAATGTCTAGGTGCGTTCTTGGACAGAATTTTATAGAAGAAAATGGAAATTGGTTTGGAGAGTTGTCAAGAACGTTGATGGCTCAACTAATGGTTTTCAGCTTCGGAGATTTCTTCCCTTCTTTGAGATGGATTGACAGTCTTAGAGGACTAACTGCGCGGTTGAATAAAACCTTTGTCGAAGTAGATGGATTCCTTGATCAGTTAATTGAAAAGCATAAGACAGCAAATGGAGAAGTTGATTCCAAGGACTTTGTGGATATTCTCCTCCAGCTTCAAAAGGATAGCATCCTTGACTTCGAGCTTACTCGAGACAACCTGAAAGCCATCCTAGTGGACATGCTCATTGGGGGAAGTGATACTAGTTCAACCGCGTTGGAATGGTTAATGGCAGAGCTGGTGAGAAATCCAAATGTAATGGCCAAAGTCCAAGAAGAAGTTAGACGGGTGGTGGGAAAAAAGGCAAGGGTGGATGTGAGTGATATCGAACAAATGGACTACCTAAAATGTGTCATCAAAGAAGCTCTAAGACTACATCCTCCAGCTCCTCTTTTAGTTCCTAGAGAAACAATTGCAGGTGTGGAATTGGGAGGTTACTATATCCCTGCGAAAACAAGAGTGTTTGTGAATGCATTTGCAATCCAAAGGGACCCTGAATTCTGGGACAGACCAGAGGAGTTCCTTCCGGAACGATTTGAGGGCAACTCAGTTGATTTCAGAGGCCAGGACTTCCAGTTCATCGCATTTGGTGGTGGGAGAAGGGGGTGTCCTGGAGTAACCTTTGCGGTTGCTGCCGCTGAATACGAGCTTGCAAACCTTCTTTATTGGTTTGATTGGAAATTGCCTAGTAGTGGTAGTGCATTGGCCGGGACCTTGGACATGACTGAAGTATACGGTCTCACTGTCCATAAAAAAGCTCCTCTTCATGTCATGCCATTATTGTACTCCCCTTGA

Protein Analysis

515

Amino Acids

57.69

Weight (kDa)

6.73

Isoelectric Point (pI)

42.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 49 - 481 8.7e-102 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1157
Acc36I ACCTGC 1 cut(s) 1157
AccB7I CCANNNNNTGG 1 cut(s) 173
AccBSI CCGCTC 1 cut(s) 210
AccI GTMKAC 1 cut(s) 1482
AccII CGCG 3 cut(s) 387, 751, 965
AccIII TCCGGA 2 cut(s) 119, 1276
AciI CCGC 7 cut(s) 146, 208, 385, 751, 963, 1376, 1386
AclI AACGTT 1 cut(s) 665
AclWI GGATC 1 cut(s) 130
AcoI YGGCCR 4 cut(s) 300, 541, 1011, 1455
AcsI RAATTY 2 cut(s) 619, 1247
AcuI CTGAAG 1 cut(s) 1497
AfaI GTAC 2 cut(s) 416, 1535
AfiI CCNNNNNNNGG 3 cut(s) 173, 466, 1442
AgsI TTSAA 7 cut(s) 22, 64, 449, 757, 803, 869, 960
AhlI ACTAGT 2 cut(s) 277, 953
AjnI CCWGG 2 cut(s) 1314, 1360
AjuI GAANNNNNNNTTGG 2 cut(s) 486, 518
AloI GAACNNNNNNTCC 2 cut(s) 1310, 1342
Alw26I GTCTC 4 cut(s) 415, 552, 897, 1493
AlwI GGATC 1 cut(s) 130
Ama87I CYCGRG 1 cut(s) 900
Aor13HI TCCGGA 2 cut(s) 119, 1276
AoxI GGCC 7 cut(s) 238, 262, 300, 541, 1011, 1312, 1455
ApeKI GCWGC 2 cut(s) 359, 1382
ApoI RAATTY 2 cut(s) 619, 1247
ArsI GACNNNNNNTTYG 2 cut(s) 380, 412
AseI ATTAAT 1 cut(s) 555
AspLEI GCGC 1 cut(s) 751
AspS9I GGNCC 4 cut(s) 239, 262, 1240, 1461
AsuC2I CCSGG 1 cut(s) 1459
AsuHPI GGTGA 2 cut(s) 43, 1003
AsuII TTCGAA 1 cut(s) 131
AvaI CYCGRG 1 cut(s) 900
AvaII GGWCC 2 cut(s) 1240, 1461
BalI TGGCCA 2 cut(s) 302, 1013
BbsI GAAGAC 1 cut(s) 323
BbvI GCAGC 2 cut(s) 346, 1369
BccI CCATC 4 cut(s) 664, 714, 773, 926
BceAI ACGGC 1 cut(s) 327
BciT130I CCWGG 2 cut(s) 1316, 1362
BclI TGATCA 1 cut(s) 790
BcnI CCSGG 1 cut(s) 1459
BcoDI GTCTC 4 cut(s) 415, 552, 897, 1493
BcuI ACTAGT 2 cut(s) 277, 953
BfaI CTAG 8 cut(s) 191, 266, 278, 600, 923, 954, 1152, 1437
BfmI CTRYAG 1 cut(s) 354
BfuAI ACCTGC 1 cut(s) 1157
BisI GCNGC 4 cut(s) 360, 385, 1383, 1386
BlsI GCNGC 4 cut(s) 361, 386, 1384, 1387
BmcAI AGTACT 1 cut(s) 416
Bme1390I CCNGG 3 cut(s) 1316, 1362, 1459
Bme18I GGWCC 2 cut(s) 1240, 1461
BmeT110I CYCGRG 1 cut(s) 900
BmgT120I GGNCC 4 cut(s) 239, 262, 1240, 1461
BmiI GGNNCC 3 cut(s) 1241, 1242, 1462
BmrFI CCNGG 3 cut(s) 1316, 1362, 1459
BmrI ACTGGG 1 cut(s) 38
BmsI GCATC 3 cut(s) 371, 558, 888
BmuI ACTGGG 1 cut(s) 38
BpiI GAAGAC 1 cut(s) 323
BplI GAGNNNNNCTC 2 cut(s) 1280, 1312
BpmI CTGGAG 5 cut(s) 322, 439, 845, 1116, 1383
Bpu14I TTCGAA 1 cut(s) 131
BpuEI CTTGAG 1 cut(s) 122
BpuMI CCSGG 1 cut(s) 1459
BsaI GGTCTC 1 cut(s) 1493
BsaJI CCNNGG 4 cut(s) 303, 538, 837, 1464
BsaWI WCCGGW 2 cut(s) 119, 1276
Bsc4I CCNNNNNNNGG 3 cut(s) 173, 466, 1442
Bse1I ACTGG 4 cut(s) 33, 422, 544, 1324
BseAI TCCGGA 2 cut(s) 119, 1276
BseBI CCWGG 2 cut(s) 1316, 1362
BseDI CCNNGG 4 cut(s) 303, 538, 837, 1464
BseGI GGATG 5 cut(s) 386, 879, 918, 1069, 1126
BseLI CCNNNNNNNGG 3 cut(s) 173, 466, 1442
BseMII CTCAG 2 cut(s) 469, 1311
BseNI ACTGG 4 cut(s) 33, 422, 544, 1324
BseRI GAGGAG 5 cut(s) 74, 848, 1128, 1280, 1500
BseXI GCAGC 2 cut(s) 346, 1369
Bsh1236I CGCG 3 cut(s) 387, 751, 965
BshFI GGCC 7 cut(s) 240, 264, 302, 543, 1013, 1314, 1457
BsiHKCI CYCGRG 1 cut(s) 900
BsiSI CCGG 3 cut(s) 120, 1277, 1458
BslFI GGGAC 4 cut(s) 330, 1253, 1268, 1474
BslI CCNNNNNNNGG 3 cut(s) 173, 466, 1442
BsmAI GTCTC 4 cut(s) 415, 552, 897, 1493
BsmFI GGGAC 4 cut(s) 330, 1253, 1268, 1474
BsmI GAATGC 1 cut(s) 1225
BsnI GGCC 7 cut(s) 240, 264, 302, 543, 1013, 1314, 1457
Bso31I GGTCTC 1 cut(s) 1493
BsoBI CYCGRG 1 cut(s) 900
Bsp119I TTCGAA 1 cut(s) 131
Bsp13I TCCGGA 2 cut(s) 119, 1276
Bsp143I GATC 3 cut(s) 48, 122, 790
BspACI CCGC 7 cut(s) 146, 208, 385, 751, 963, 1376, 1386
BspANI GGCC 7 cut(s) 240, 264, 302, 543, 1013, 1314, 1457
BspCNI CTCAG 2 cut(s) 468, 1310
BspEI TCCGGA 2 cut(s) 119, 1276
BspFNI CGCG 3 cut(s) 387, 751, 965
BspHI TCATGA 1 cut(s) 312
BspLI GGNNCC 3 cut(s) 1241, 1242, 1462
BspMI ACCTGC 1 cut(s) 1157
BspPI GGATC 1 cut(s) 130
BspT104I TTCGAA 1 cut(s) 131
BspTNI GGTCTC 1 cut(s) 1493
BsrBI CCGCTC 1 cut(s) 210
BsrI ACTGG 4 cut(s) 33, 422, 544, 1324
BssECI CCNNGG 4 cut(s) 303, 538, 837, 1464
BssMI GATC 3 cut(s) 48, 122, 790
BssNAI GTATAC 1 cut(s) 1483
BssT1I CCWWGG 3 cut(s) 303, 837, 1464
Bst1107I GTATAC 1 cut(s) 1483
Bst2UI CCWGG 2 cut(s) 1316, 1362
Bst4CI ACNGT 4 cut(s) 331, 731, 1487, 1495
Bst6I CTCTTC 1 cut(s) 1518
BstBI TTCGAA 1 cut(s) 131
BstC8I GCNNGC 2 cut(s) 535, 1401
BstDEI CTNAG 6 cut(s) 228, 455, 560, 734, 1118, 1297
BstF5I GGATG 5 cut(s) 386, 879, 918, 1069, 1126
BstFNI CGCG 3 cut(s) 387, 751, 965
BstHHI GCGC 1 cut(s) 751
BstKTI GATC 3 cut(s) 51, 125, 793
BstMAI GTCTC 4 cut(s) 415, 552, 897, 1493
BstMBI GATC 3 cut(s) 48, 122, 790
BstMWI GCNNNNNNNGC 4 cut(s) 216, 299, 393, 1382
BstNI CCWGG 2 cut(s) 1316, 1362
BstNSI RCATGY 1 cut(s) 934
BstSCI CCNGG 3 cut(s) 1314, 1360, 1457
BstSFI CTRYAG 1 cut(s) 354
BstUI CGCG 3 cut(s) 387, 751, 965
BstV1I GCAGC 2 cut(s) 346, 1369
BstV2I GAAGAC 1 cut(s) 323
BstXI CCANNNNNNTGG 1 cut(s) 925
BstZ17I GTATAC 1 cut(s) 1483
BsuRI GGCC 7 cut(s) 240, 264, 302, 543, 1013, 1314, 1457
BtgZI GCGATG 1 cut(s) 1315
BtsCI GGATG 5 cut(s) 386, 879, 918, 1069, 1126
BtsIMutI CAGTG 1 cut(s) 1491
BveI ACCTGC 1 cut(s) 1157
Cac8I GCNNGC 2 cut(s) 535, 1401
CciI TCATGA 1 cut(s) 312
CfoI GCGC 1 cut(s) 751
Cfr13I GGNCC 4 cut(s) 239, 262, 1240, 1461
Csp6I GTAC 2 cut(s) 415, 1534
CviAII CATG 8 cut(s) 15, 150, 313, 323, 931, 1471, 1517, 1522
CviQI GTAC 2 cut(s) 415, 1534
DdeI CTNAG 6 cut(s) 228, 455, 560, 734, 1118, 1297
DpnI GATC 3 cut(s) 50, 124, 792
DpnII GATC 3 cut(s) 48, 122, 790
EaeI YGGCCR 4 cut(s) 300, 541, 1011, 1455
Eam1104I CTCTTC 1 cut(s) 1518
EarI CTCTTC 1 cut(s) 1518
Eco130I CCWWGG 3 cut(s) 303, 837, 1464
Eco31I GGTCTC 1 cut(s) 1493
Eco32I GATATC 1 cut(s) 1075
Eco47I GGWCC 2 cut(s) 1240, 1461
Eco57I CTGAAG 1 cut(s) 1497
Eco88I CYCGRG 1 cut(s) 900
EcoO109I RGGNCCY 2 cut(s) 1240, 1461
EcoRI GAATTC 1 cut(s) 1247
EcoRII CCWGG 2 cut(s) 1314, 1360
EcoRV GATATC 1 cut(s) 1075
EcoT14I CCWWGG 3 cut(s) 303, 837, 1464
EcoT22I ATGCAT 1 cut(s) 1225
ErhI CCWWGG 3 cut(s) 303, 837, 1464
FaeI CATG 8 cut(s) 18, 153, 316, 326, 934, 1474, 1520, 1525
FalI AAGNNNNNCTT 2 cut(s) 1497, 1529
FaqI GGGAC 4 cut(s) 330, 1253, 1268, 1474
FatI CATG 8 cut(s) 14, 149, 312, 322, 930, 1470, 1516, 1521
FbaI TGATCA 1 cut(s) 790
FblI GTMKAC 1 cut(s) 1482
Fnu4HI GCNGC 4 cut(s) 360, 385, 1383, 1386
FokI GGATG 5 cut(s) 393, 866, 905, 1076, 1113
Fsp4HI GCNGC 4 cut(s) 360, 385, 1383, 1386
FspBI CTAG 8 cut(s) 191, 266, 278, 600, 923, 954, 1152, 1437
GlaI GCGC 1 cut(s) 750
GluI GCNGC 4 cut(s) 360, 385, 1383, 1386
GsuI CTGGAG 5 cut(s) 322, 439, 845, 1116, 1383
HaeIII GGCC 7 cut(s) 240, 264, 302, 543, 1013, 1314, 1457
HapII CCGG 3 cut(s) 120, 1277, 1458
HhaI GCGC 1 cut(s) 751
Hin1II CATG 8 cut(s) 18, 153, 316, 326, 934, 1474, 1520, 1525
Hin6I GCGC 1 cut(s) 749
HinP1I GCGC 1 cut(s) 749
HinfI GANTC 3 cut(s) 22, 783, 833
HpaII CCGG 3 cut(s) 120, 1277, 1458
HphI GGTGA 2 cut(s) 43, 1003
Hpy166II GTNNAC 3 cut(s) 517, 928, 1483
Hpy188I TCNGA 3 cut(s) 432, 698, 1310
Hpy188III TCNNGA 6 cut(s) 120, 313, 446, 660, 902, 1277
Hpy8I GTNNAC 3 cut(s) 517, 928, 1483
HpyAV CCTTC 5 cut(s) 70, 720, 1283, 1344, 1418
HpyCH4III ACNGT 4 cut(s) 331, 731, 1487, 1495
HpyCH4IV ACGT 1 cut(s) 665
HpyCH4V TGCA 8 cut(s) 362, 472, 488, 1166, 1223, 1229, 1403, 1451
HpyF10VI GCNNNNNNNGC 4 cut(s) 216, 299, 393, 1382
HpyF3I CTNAG 6 cut(s) 228, 455, 560, 734, 1118, 1297
HpySE526I ACGT 1 cut(s) 665
Hsp92II CATG 8 cut(s) 18, 153, 316, 326, 934, 1474, 1520, 1525
HspAI GCGC 1 cut(s) 749
KflI GGGWCCC 1 cut(s) 1240
Kpn2I TCCGGA 2 cut(s) 119, 1276
Ksp22I TGATCA 1 cut(s) 790
Kzo9I GATC 3 cut(s) 48, 122, 790
LmnI GCTCC 3 cut(s) 406, 1141, 1513
Lsp1109I GCAGC 2 cut(s) 346, 1369
LweI GCATC 3 cut(s) 371, 558, 888
MaeI CTAG 8 cut(s) 191, 266, 278, 600, 923, 954, 1152, 1437
MaeII ACGT 1 cut(s) 665
MaeIII GTNAC 3 cut(s) 141, 1184, 1366
MalI GATC 3 cut(s) 50, 124, 792
MbiI CCGCTC 1 cut(s) 210
MboI GATC 3 cut(s) 48, 122, 790
MboII GAAGA 7 cut(s) 328, 506, 509, 641, 697, 1037, 1505
MfeI CAATTG 1 cut(s) 1161
MlsI TGGCCA 2 cut(s) 302, 1013
MluNI TGGCCA 2 cut(s) 302, 1013
MmeI TCCRAC 4 cut(s) 179, 296, 609, 948
Mox20I TGGCCA 2 cut(s) 302, 1013
Mph1103I ATGCAT 1 cut(s) 1225
MroI TCCGGA 2 cut(s) 119, 1276
MscI TGGCCA 2 cut(s) 302, 1013
MseI TTAA 3 cut(s) 555, 797, 977
MslI CAYNNNNRTG 1 cut(s) 923
Msp20I TGGCCA 2 cut(s) 302, 1013
MspA1I CMGCKG 2 cut(s) 359, 1388
MspI CCGG 3 cut(s) 120, 1277, 1458
MspR9I CCNGG 3 cut(s) 1316, 1362, 1459
MunI CAATTG 1 cut(s) 1161
Mva1269I GAATGC 1 cut(s) 1225
MvaI CCWGG 2 cut(s) 1316, 1362
MvnI CGCG 3 cut(s) 387, 751, 965
MwoI GCNNNNNNNGC 4 cut(s) 216, 299, 393, 1382
NciI CCSGG 1 cut(s) 1459
NdeII GATC 3 cut(s) 48, 122, 790
NlaIII CATG 8 cut(s) 18, 153, 316, 326, 934, 1474, 1520, 1525
NlaIV GGNNCC 3 cut(s) 1241, 1242, 1462
NmeAIII GCCGAG 1 cut(s) 519
NsiI ATGCAT 1 cut(s) 1225
NspI RCATGY 1 cut(s) 934
NspV TTCGAA 1 cut(s) 131
PaeR7I CTCGAG 1 cut(s) 900
PagI TCATGA 1 cut(s) 312
PaqCI CACCTGC 1 cut(s) 1157
PctI GAATGC 1 cut(s) 1225
PfeI GAWTC 3 cut(s) 22, 783, 833
PflMI CCANNNNNTGG 1 cut(s) 173
PfoI TCCNGGA 1 cut(s) 1360
PkrI GCNGC 4 cut(s) 361, 386, 1384, 1387
PpuMI RGGWCCY 2 cut(s) 1240, 1461
PshBI ATTAAT 1 cut(s) 555
Psp1406I AACGTT 1 cut(s) 665
Psp5II RGGWCCY 2 cut(s) 1240, 1461
Psp6I CCWGG 2 cut(s) 1314, 1360
PspGI CCWGG 2 cut(s) 1314, 1360
PspN4I GGNNCC 3 cut(s) 1241, 1242, 1462
PspPI GGNCC 4 cut(s) 239, 262, 1240, 1461
PspPPI RGGWCCY 2 cut(s) 1240, 1461
PvuII CAGCTG 1 cut(s) 359
RsaI GTAC 2 cut(s) 416, 1535
RsaNI GTAC 2 cut(s) 415, 1534
RseI CAYNNNNRTG 1 cut(s) 923
SaqAI TTAA 3 cut(s) 555, 797, 977
SatI GCNGC 4 cut(s) 360, 385, 1383, 1386
Sau3AI GATC 3 cut(s) 48, 122, 790
Sau96I GGNCC 4 cut(s) 239, 262, 1240, 1461
ScaI AGTACT 1 cut(s) 416
ScrFI CCNGG 3 cut(s) 1316, 1362, 1459
SfaNI GCATC 3 cut(s) 371, 558, 888
SfcI CTRYAG 1 cut(s) 354
Sfr274I CTCGAG 1 cut(s) 900
SfuI TTCGAA 1 cut(s) 131
SinI GGWCC 2 cut(s) 1240, 1461
SlaI CTCGAG 1 cut(s) 900
SmiMI CAYNNNNRTG 1 cut(s) 923
SmlI CTYRAG 2 cut(s) 137, 900
SmoI CTYRAG 2 cut(s) 137, 900
SpeI ACTAGT 2 cut(s) 277, 953
SsiI CCGC 7 cut(s) 146, 208, 385, 751, 963, 1376, 1386
SspMI CTAG 8 cut(s) 191, 266, 278, 600, 923, 954, 1152, 1437
StyD4I CCNGG 3 cut(s) 1314, 1360, 1457
StyI CCWWGG 3 cut(s) 303, 837, 1464
TaaI ACNGT 4 cut(s) 331, 731, 1487, 1495
TaiI ACGT 1 cut(s) 668
TaqI TCGA 5 cut(s) 131, 771, 891, 901, 1077
TatI WGTACW 2 cut(s) 414, 1533
TauI GCSGC 2 cut(s) 387, 1388
TfiI GAWTC 3 cut(s) 22, 783, 833
Tru1I TTAA 3 cut(s) 555, 797, 977
Tru9I TTAA 3 cut(s) 555, 797, 977
TscAI CASTG 1 cut(s) 1498
TseI GCWGC 2 cut(s) 359, 1382
TspDTI ATGAA 7 cut(s) 91, 102, 245, 276, 329, 1318, 1505
TspRI CASTG 1 cut(s) 1498
Van91I CCANNNNNTGG 1 cut(s) 173
VpaK11BI GGWCC 2 cut(s) 1240, 1461
VspI ATTAAT 1 cut(s) 555
XapI RAATTY 2 cut(s) 619, 1247
XceI RCATGY 1 cut(s) 934
XcmI CCANNNNNNNNNTGG 1 cut(s) 844
XhoI CTCGAG 1 cut(s) 900
XmiI GTMKAC 1 cut(s) 1482
XspI CTAG 8 cut(s) 191, 266, 278, 600, 923, 954, 1152, 1437
ZrmI AGTACT 1 cut(s) 416
Zsp2I ATGCAT 1 cut(s) 1225
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.