FvH4_3g30470

Zinc finger, C3HC4 type (RING finger)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0003793
Physical Location & Seq
Reverse (-)
23729742 .. 23742170
12429 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g30470.t7

Sequence Viewer

Length: 2520 bp
ATGGCTATTGCTGGTCTACAAAATGTTTCTGTGCTTGAGTCTTCTTTCCTTAGGAGCTCTCAATCTGGTGCATCTAGAAGGTCAGAAAATGAAGGGAGGGGTAACTCCCGGGCGTCCTCTCTACTACAAATGTGGCGAGAGCTTGAGGATGAGCACATGGTGAGTCGTCCCCTTGAGAGAGTTGGTGAAAGGTTGTTCCAACAAAGGAGGGATGGAGTTGGTAGCGAGAATACAGGTGACTTGGATGATGCAAGTGCGGGTGAGAGTGAGTGCAGAACATGGTCCCAAGGTCAGATTGGGTCATCCCCTGAACATGACAGATATAGCAATTTTAGCAGTGAGCACTCTTCTGATTTTGGGGAGGGTGAAAGAGGGAGAGTGAGACAAATTTTTCAGGAATGGATGAACTGTGGTGCGACCGAATGTGCATCAAATGTTTCTCATATGAATAACAGTTCAAGGGCAGAGTTACTTGGTGAAACTGAACAGGAGAGAGTGAGAATTATAAGGGAGTGGGTACGAATGAACAGCCAGCAGAGAGTTGCTTCTGGTGAAAATGGAGAAGAACAACCTGCTGATTTTGGTAATCAAATTGCACGAGTTCGTGATGGATTGGTTGTTAACCAAAGTGGAGGCCGGTCTGAGCATAACCGGAGGGGAATACGTAAATTATGCGGGAGACAAGCTTTACTGGATATGTTAAAGAAGGCTGAGAGTGAGAGGCAAAGAGAACTTCAAGTCTTGTCAGAGCACCAGCCTGTAACACGTTTTGCTCACCGCAACCGCATTCAGTCATTGCTTCGAGGAAGATTTTTACGAAATGGTAGAGCCATTGAGAATGAGAGACCTATGTCACTGGCTGAAACTGAATTGGGCTTATTGAGGCAAAGACATACCGTCTCTGGTCTGAGGGATGGTTTTGACTCCAAATTGGATACTCCTGTTGGTGGTCAAGTAGGCAGCTGTCAGTCTGATTCATCCTCAAGCAATTCTAATGGTGTCAGAAATGTCCATAATCAGGCAAACAATTCACATGAAGTCTTAAGTGGTTCTTCTGAGCAGTCTGAGGCTAATGTCATTGCAAGTAATGACCAAGGACATGATAGTTGTGGAACATCAGCTGCTAGGGATGATTTAGGTGGAAACACCATTCAGGATTTAGATTCACATCAATCTATTGCTCCCATAGAACATGTGCAGGAAGAGGTTCCGGATAATGTTGTAAGAGGCTGGCAATCCTCTTCCTCTACTGAAATTGCTGAGAGTAGGGAAGGAGCTCATCACAACATGGTTGGTAACATACGTACAACCACTGCTGTTCAGCAGTCACAAGAAACTTTGCAAAATGATGTTAATGGCCACAGTAACATTCAAGGAGCCAGTGGTTTATCTATTGAACAATCTGAGCTTCATGAGGATGAAAGTGTCGTCCATGAACTTTATTATGCAAGCGGAAATCTACTCGGGGATGCAAATATCCAAGAGTCCAACTCACAGCTACACCAATGGCAGGATCGTGTTTCAGAGAATGAGGAACGAGACCAGGTGCAAGCTGTTGAGTATGATAGTCAAACTGTGGAAAATACAAGTGAAGATCAGCTGGAATCTTCTGGTTATGACTGGTCCCAGGAGTTGGTAGAGAACGAAGTCAGAGAAGATGATCAACTTCAAGAAGTCCCTGAAGTGTGGCACAATGAAAGTGGTTTTCATGAGGCTGTTCAAAGTTGGTTAGAAGAGCCATCCAGCCAGGATTCCGATTCATTCAGGCGGGCTGATACATTTTATTATCCTGATGATGATAATGCTCACAATACAGAGCTAAGGGAACTTCTAAGCAGGAGAAGGGTCTCTAATCTTCTGAGCAGTGGTTTCCGTCAGAACCTAGATCAACTCATACAGTCATATGTGGAAAGGCAAGGTCATGCTGCTATTGACTGGGATGAGGCATCAGCTTCTCCTGAATTGACTGAAGATATGGAGCAGACATATCAGAATGAGGTTCAAGTGAATGGTGTTGACAGTCCTCACCTTGCTCTGCCACCGCAGCCAATACCTTCTTCTCCCCTGTGGCACCAGGAGTCACACCATGATAACTGGCCACGACATGACATGCATCAGCGCTATGGAATTGACTGGGAGATGGTTAATGATATGAGGATCGACATGGCTAGGTTGCAACAGAGGATGAACAACTTGCAAAGGATGTTGGAGGCCTGCATGGATATGCAACTCGAGTTGCAACGATCAATAAGACAAGAAGTTTCTGATGCCCTGAATCGCTCAGCCGGTTCACAAGGGGCATGTGAAGATGGTCTCCTAGATGATGGGTCTAAATGGGATAATGTCAGGAAAGGAATTTGCTGTATTTGTAGTGTCAGCAGTATTGATTCTTTACTATACAGATGTGGTCACATGTGTACATGTTCAAAATGCGCTACCGAATTGGTCGAGAATAGCGGAAAATGTCCGATGTGTAGAGCACCCGCCGTTGAGGTGATCCGGGCTTATTCTGTATTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000209 GO:0001654 GO:0001709 GO:0002009 GO:0002064 GO:0002065 GO:0002066 GO:0002165 GO:0002682 GO:0002683 GO:0003002 GO:0003006 GO:0003008 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006464 GO:0006807 GO:0007275 GO:0007276 GO:0007281 GO:0007292 GO:0007389 GO:0007398 GO:0007399 GO:0007422 GO:0007423 GO:0007444 GO:0007472 GO:0007476 GO:0007498 GO:0007552 GO:0007560 GO:0007610 GO:0007611 GO:0007613 GO:0007616 GO:0008052 GO:0008104 GO:0008150 GO:0008152 GO:0008270 GO:0008289 GO:0008356 GO:0008593 GO:0009653 GO:0009791 GO:0009886 GO:0009887 GO:0009888 GO:0009966 GO:0009967 GO:0009987 GO:0010160 GO:0010646 GO:0010647 GO:0016020 GO:0016043 GO:0016360 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019827 GO:0019953 GO:0022008 GO:0022412 GO:0022414 GO:0022603 GO:0022607 GO:0023051 GO:0023056 GO:0030154 GO:0030707 GO:0030718 GO:0030855 GO:0032446 GO:0032501 GO:0032502 GO:0032504 GO:0033036 GO:0035091 GO:0035107 GO:0035114 GO:0035120 GO:0035203 GO:0035204 GO:0035220 GO:0035239 GO:0035295 GO:0036211 GO:0042478 GO:0043167 GO:0043168 GO:0043169 GO:0043170 GO:0043412 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0044703 GO:0045165 GO:0045314 GO:0045595 GO:0045596 GO:0045610 GO:0045611 GO:0045613 GO:0045614 GO:0045664 GO:0045747 GO:0046532 GO:0046872 GO:0046914 GO:0048468 GO:0048471 GO:0048477 GO:0048513 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048563 GO:0048569 GO:0048580 GO:0048581 GO:0048583 GO:0048584 GO:0048609 GO:0048645 GO:0048646 GO:0048699 GO:0048707 GO:0048729 GO:0048731 GO:0048736 GO:0048737 GO:0048749 GO:0048856 GO:0048859 GO:0048869 GO:0050767 GO:0050789 GO:0050793 GO:0050794 GO:0050877 GO:0050890 GO:0051093 GO:0051179 GO:0051239 GO:0051241 GO:0051259 GO:0051260 GO:0051301 GO:0051704 GO:0051960 GO:0060284 GO:0060429 GO:0060562 GO:0060581 GO:0060582 GO:0061630 GO:0061659 GO:0065003 GO:0065007 GO:0070647 GO:0071704 GO:0071840 GO:0071944 GO:0098727 GO:0140096 GO:1901564 GO:1901981 GO:1903706 GO:1903707 GO:2000026 GO:2000027
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-C3HC4_3

Protein Analysis

840

Amino Acids

94.26

Weight (kDa)

4.85

Isoelectric Point (pI)

64.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-C3HC4_3 PF13920 785 - 829 1.1e-10 Zinc finger, C3HC4 type (RING finger)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 506, 2518
Acc36I ACCTGC 1 cut(s) 580
AccB1I GGYRCC 1 cut(s) 2070
AccB7I CCANNNNNTGG 1 cut(s) 1633
AccI GTMKAC 1 cut(s) 16
AccIII TCCGGA 1 cut(s) 1210
AciI CCGC 9 cut(s) 257, 675, 778, 784, 1452, 1768, 2042, 2457, 2484
AclWI GGATC 3 cut(s) 1521, 2165, 2491
AcoI YGGCCR 2 cut(s) 1357, 2096
AcsI RAATTY 2 cut(s) 387, 2355
AcuI CTGAAG 2 cut(s) 1701, 1989
AcyI GRCGYC 1 cut(s) 113
AdeI CACNNNGTG 1 cut(s) 160
AfaI GTAC 3 cut(s) 519, 1306, 2419
AfeI AGCGCT 1 cut(s) 2120
AfiI CCNNNNNNNGG 4 cut(s) 947, 1018, 1510, 1633
AflII CTTAAG 1 cut(s) 1042
AflIII ACRYGT 4 cut(s) 764, 1192, 2412, 2420
AgsI TTSAA 8 cut(s) 459, 737, 1373, 1397, 1670, 1721, 2003, 2427
AhdI GACNNNNNGTC 1 cut(s) 896
AjnI CCWGG 4 cut(s) 1542, 1626, 1746, 2073
AjuI GAANNNNNNNTTGG 2 cut(s) 2041, 2073
Alw21I GWGCWC 6 cut(s) 59, 156, 345, 753, 1279, 2482
Alw26I GTCTC 7 cut(s) 376, 673, 838, 904, 1533, 1852, 2318
AlwI GGATC 3 cut(s) 1521, 2165, 2491
Ama87I CYCGRG 3 cut(s) 108, 1463, 2231
Aor13HI TCCGGA 1 cut(s) 1210
Aor51HI AGCGCT 1 cut(s) 2120
AoxI GGCC 4 cut(s) 634, 1357, 2096, 2211
ApeKI GCWGC 4 cut(s) 960, 1121, 1925, 2044
ApoI RAATTY 2 cut(s) 387, 2355
Asp700I GAANNNNTTC 1 cut(s) 1206
AspLEI GCGC 2 cut(s) 2121, 2435
AspS9I GGNCC 2 cut(s) 282, 1623
AsuC2I CCSGG 3 cut(s) 109, 110, 2501
AvaI CYCGRG 3 cut(s) 108, 1463, 2231
AvaII GGWCC 2 cut(s) 282, 1623
AxyI CCTNAGG 1 cut(s) 50
BaeI ACNNNNGTAYC 2 cut(s) 927, 960
BalI TGGCCA 2 cut(s) 1359, 2098
BanI GGYRCC 1 cut(s) 2070
BanII GRGCYC 2 cut(s) 59, 1279
BauI CACGAG 1 cut(s) 597
BbsI GAAGAC 1 cut(s) 33
Bbv12I GWGCWC 6 cut(s) 59, 156, 345, 753, 1279, 2482
BbvI GCAGC 4 cut(s) 972, 1108, 1912, 2056
BccI CCATC 7 cut(s) 206, 602, 908, 1747, 2134, 2303, 2318
BceAI ACGGC 1 cut(s) 2471
BciT130I CCWGG 4 cut(s) 1544, 1628, 1748, 2075
BciVI GTATCC 1 cut(s) 928
BclI TGATCA 1 cut(s) 1660
BcnI CCSGG 3 cut(s) 109, 110, 2501
BcoDI GTCTC 7 cut(s) 376, 673, 838, 904, 1533, 1852, 2318
BfaI CTAG 5 cut(s) 75, 1125, 1883, 2169, 2318
BfoI RGCGCY 1 cut(s) 2122
BfrI CTTAAG 1 cut(s) 1042
BfuAI ACCTGC 1 cut(s) 580
BfuI GTATCC 1 cut(s) 928
BisI GCNGC 4 cut(s) 961, 1122, 1926, 2045
BlpI GCTNAGC 1 cut(s) 2281
BlsI GCNGC 4 cut(s) 962, 1123, 1927, 2046
Bme1390I CCNGG 7 cut(s) 109, 110, 1544, 1628, 1748, 2075, 2501
Bme18I GGWCC 2 cut(s) 282, 1623
BmeRI GACNNNNNGTC 1 cut(s) 896
BmeT110I CYCGRG 3 cut(s) 108, 1463, 2231
BmgT120I GGNCC 2 cut(s) 282, 1623
BmiI GGNNCC 5 cut(s) 284, 1209, 1378, 1625, 2072
BmrFI CCNGG 7 cut(s) 109, 110, 1544, 1628, 1748, 2075, 2501
BmrI ACTGGG 2 cut(s) 1945, 2143
BmsI GCATC 7 cut(s) 80, 238, 437, 1459, 1955, 2122, 2257
BmuI ACTGGG 2 cut(s) 1945, 2143
BoxI GACNNNNGTC 1 cut(s) 850
BpiI GAAGAC 1 cut(s) 33
BplI GAGNNNNNCTC 2 cut(s) 1475, 1507
Bpu10I CCTNAGC 1 cut(s) 1820
Bpu1102I GCTNAGC 1 cut(s) 2281
BpuEI CTTGAG 4 cut(s) 56, 164, 194, 967
BpuMI CCSGG 3 cut(s) 109, 110, 2501
BsaAI YACGTR 2 cut(s) 665, 1304
BsaBI GATNNNNATC 1 cut(s) 1167
BsaHI GRCGYC 1 cut(s) 113
BsaI GGTCTC 4 cut(s) 838, 1533, 1852, 2318
BsaJI CCNNGG 4 cut(s) 108, 286, 1093, 1626
BsaWI WCCGGW 2 cut(s) 651, 1210
Bsc4I CCNNNNNNNGG 4 cut(s) 947, 1018, 1510, 1633
Bse118I RCCGGY 2 cut(s) 636, 2285
Bse1I ACTGG 7 cut(s) 696, 861, 1380, 1625, 1940, 2099, 2138
Bse21I CCTNAGG 1 cut(s) 50
Bse3DI GCAATG 2 cut(s) 794, 1077
Bse8I GATNNNNATC 1 cut(s) 1167
BseAI TCCGGA 1 cut(s) 1210
BseBI CCWGG 4 cut(s) 1544, 1628, 1748, 2075
BseDI CCNNGG 4 cut(s) 108, 286, 1093, 1626
BseJI GATNNNNATC 1 cut(s) 1167
BseLI CCNNNNNNNGG 4 cut(s) 947, 1018, 1510, 1633
BseMI GCAATG 2 cut(s) 794, 1077
BseMII CTCAG 9 cut(s) 633, 702, 899, 1047, 1056, 1251, 1395, 1850, 2295
BseNI ACTGG 7 cut(s) 696, 861, 1380, 1625, 1940, 2099, 2138
BseXI GCAGC 4 cut(s) 972, 1108, 1912, 2056
BsgI GTGCAG 2 cut(s) 292, 1217
Bsh1285I CGRYCG 1 cut(s) 420
BshFI GGCC 4 cut(s) 636, 1359, 2098, 2213
BshNI GGYRCC 1 cut(s) 2070
BsiEI CGRYCG 1 cut(s) 420
BsiHKAI GWGCWC 6 cut(s) 59, 156, 345, 753, 1279, 2482
BsiHKCI CYCGRG 3 cut(s) 108, 1463, 2231
BsiSI CCGG 6 cut(s) 109, 637, 652, 1211, 2286, 2500
BslFI GGGAC 4 cut(s) 153, 268, 1609, 1661
BslI CCNNNNNNNGG 4 cut(s) 947, 1018, 1510, 1633
BsmAI GTCTC 7 cut(s) 376, 673, 838, 904, 1533, 1852, 2318
BsmBI CGTCTC 1 cut(s) 904
BsmFI GGGAC 4 cut(s) 153, 268, 1609, 1661
BsmI GAATGC 1 cut(s) 786
BsnI GGCC 4 cut(s) 636, 1359, 2098, 2213
Bso31I GGTCTC 4 cut(s) 838, 1533, 1852, 2318
BsoBI CYCGRG 3 cut(s) 108, 1463, 2231
Bsp1286I GDGCHC 6 cut(s) 59, 156, 345, 753, 1279, 2482
Bsp13I TCCGGA 1 cut(s) 1210
Bsp1407I TGTACA 1 cut(s) 2417
Bsp143I GATC 7 cut(s) 1513, 1594, 1660, 1885, 2157, 2243, 2496
Bsp1720I GCTNAGC 1 cut(s) 2281
BspACI CCGC 9 cut(s) 257, 675, 778, 784, 1452, 1768, 2042, 2457, 2484
BspANI GGCC 4 cut(s) 636, 1359, 2098, 2213
BspCNI CTCAG 9 cut(s) 634, 703, 900, 1048, 1057, 1252, 1396, 1851, 2294
BspEI TCCGGA 1 cut(s) 1210
BspHI TCATGA 2 cut(s) 1411, 1708
BspLI GGNNCC 5 cut(s) 284, 1209, 1378, 1625, 2072
BspMI ACCTGC 1 cut(s) 580
BspPI GGATC 3 cut(s) 1521, 2165, 2491
BspQI GCTCTTC 1 cut(s) 1728
BspT107I GGYRCC 1 cut(s) 2070
BspTI CTTAAG 1 cut(s) 1042
BspTNI GGTCTC 4 cut(s) 838, 1533, 1852, 2318
BsrDI GCAATG 2 cut(s) 794, 1077
BsrFI RCCGGY 2 cut(s) 636, 2285
BsrGI TGTACA 1 cut(s) 2417
BsrI ACTGG 7 cut(s) 696, 861, 1380, 1625, 1940, 2099, 2138
BssAI RCCGGY 2 cut(s) 636, 2285
BssECI CCNNGG 4 cut(s) 108, 286, 1093, 1626
BssMI GATC 7 cut(s) 1513, 1594, 1660, 1885, 2157, 2243, 2496
BssNI GRCGYC 1 cut(s) 113
BssSI CACGAG 1 cut(s) 597
BssT1I CCWWGG 2 cut(s) 286, 1093
Bst2BI CACGAG 1 cut(s) 597
Bst2UI CCWGG 4 cut(s) 1544, 1628, 1748, 2075
Bst4CI ACNGT 7 cut(s) 410, 455, 898, 1364, 1576, 1899, 2021
Bst6I CTCTTC 4 cut(s) 352, 1197, 1246, 1728
BstACI GRCGYC 1 cut(s) 113
BstAFI CTTAAG 1 cut(s) 1042
BstAUI TGTACA 1 cut(s) 2417
BstBAI YACGTR 2 cut(s) 665, 1304
BstC8I GCNNGC 6 cut(s) 533, 1232, 1450, 1551, 1770, 2215
BstH2I RGCGCY 1 cut(s) 2122
BstHHI GCGC 2 cut(s) 2121, 2435
BstKTI GATC 7 cut(s) 1516, 1597, 1663, 1888, 2160, 2246, 2499
BstMAI GTCTC 7 cut(s) 376, 673, 838, 904, 1533, 1852, 2318
BstMBI GATC 7 cut(s) 1513, 1594, 1660, 1885, 2157, 2243, 2496
BstMCI CGRYCG 1 cut(s) 420
BstMWI GCNNNNNNNGC 2 cut(s) 333, 2044
BstNI CCWGG 4 cut(s) 1544, 1628, 1748, 2075
BstNSI RCATGY 5 cut(s) 1196, 2113, 2304, 2416, 2424
BstPAI GACNNNNGTC 1 cut(s) 850
BstSCI CCNGG 7 cut(s) 107, 108, 1542, 1626, 1746, 2073, 2499
BstSNI TACGTA 2 cut(s) 665, 1304
BstV1I GCAGC 4 cut(s) 972, 1108, 1912, 2056
BstV2I GAAGAC 1 cut(s) 33
Bsu36I CCTNAGG 1 cut(s) 50
BsuI GTATCC 1 cut(s) 928
BsuRI GGCC 4 cut(s) 636, 1359, 2098, 2213
BtsI GCAGTG 3 cut(s) 343, 1311, 1870
BtsIMutI CAGTG 5 cut(s) 343, 854, 1311, 1387, 1870
BveI ACCTGC 1 cut(s) 580
Cac8I GCNNGC 6 cut(s) 533, 1232, 1450, 1551, 1770, 2215
CciI TCATGA 2 cut(s) 1411, 1708
CfoI GCGC 2 cut(s) 2121, 2435
Cfr10I RCCGGY 2 cut(s) 636, 2285
Cfr13I GGNCC 2 cut(s) 282, 1623
Cfr9I CCCGGG 1 cut(s) 108
CseI GACGC 1 cut(s) 102
CsiI ACCWGGT 1 cut(s) 1542
Csp6I GTAC 3 cut(s) 518, 1305, 2418
CspCI CAANNNNNGTGG 2 cut(s) 1681, 1716
CviQI GTAC 3 cut(s) 518, 1305, 2418
DpnI GATC 7 cut(s) 1515, 1596, 1662, 1887, 2159, 2245, 2498
DpnII GATC 7 cut(s) 1513, 1594, 1660, 1885, 2157, 2243, 2496
DraIII CACNNNGTG 1 cut(s) 160
DriI GACNNNNNGTC 1 cut(s) 896
EaeI YGGCCR 2 cut(s) 1357, 2096
Eam1104I CTCTTC 4 cut(s) 352, 1197, 1246, 1728
Eam1105I GACNNNNNGTC 1 cut(s) 896
EarI CTCTTC 4 cut(s) 352, 1197, 1246, 1728
Ecl136II GAGCTC 2 cut(s) 57, 1277
Eco105I TACGTA 2 cut(s) 665, 1304
Eco130I CCWWGG 2 cut(s) 286, 1093
Eco147I AGGCCT 1 cut(s) 2213
Eco24I GRGCYC 2 cut(s) 59, 1279
Eco31I GGTCTC 4 cut(s) 838, 1533, 1852, 2318
Eco47I GGWCC 2 cut(s) 282, 1623
Eco47III AGCGCT 1 cut(s) 2120
Eco53kI GAGCTC 2 cut(s) 57, 1277
Eco57I CTGAAG 2 cut(s) 1701, 1989
Eco81I CCTNAGG 1 cut(s) 50
Eco88I CYCGRG 3 cut(s) 108, 1463, 2231
EcoICRI GAGCTC 2 cut(s) 57, 1277
EcoRII CCWGG 4 cut(s) 1542, 1626, 1746, 2073
EcoT14I CCWWGG 2 cut(s) 286, 1093
EcoT22I ATGCAT 1 cut(s) 2115
EcoT38I GRGCYC 2 cut(s) 59, 1279
ErhI CCWWGG 2 cut(s) 286, 1093
Esp3I CGTCTC 1 cut(s) 904
FalI AAGNNNNNCTT 2 cut(s) 1036, 1068
FaqI GGGAC 4 cut(s) 153, 268, 1609, 1661
FauI CCCGC 4 cut(s) 250, 668, 1761, 2491
FauNDI CATATG 2 cut(s) 444, 1903
FbaI TGATCA 1 cut(s) 1660
FblI GTMKAC 1 cut(s) 16
Fnu4HI GCNGC 4 cut(s) 961, 1122, 1926, 2045
FriOI GRGCYC 2 cut(s) 59, 1279
Fsp4HI GCNGC 4 cut(s) 961, 1122, 1926, 2045
FspBI CTAG 5 cut(s) 75, 1125, 1883, 2169, 2318
GlaI GCGC 2 cut(s) 2120, 2434
GluI GCNGC 4 cut(s) 961, 1122, 1926, 2045
HaeII RGCGCY 1 cut(s) 2122
HaeIII GGCC 4 cut(s) 636, 1359, 2098, 2213
HapII CCGG 6 cut(s) 109, 637, 652, 1211, 2286, 2500
HgaI GACGC 1 cut(s) 102
HhaI GCGC 2 cut(s) 2121, 2435
Hin1I GRCGYC 1 cut(s) 113
Hin6I GCGC 2 cut(s) 2119, 2433
HinP1I GCGC 2 cut(s) 2119, 2433
HincII GTYRAC 2 cut(s) 622, 2017
HindII GTYRAC 2 cut(s) 622, 2017
HindIII AAGCTT 1 cut(s) 684
HpaI GTTAAC 1 cut(s) 622
HpaII CCGG 6 cut(s) 109, 637, 652, 1211, 2286, 2500
Hpy166II GTNNAC 5 cut(s) 17, 622, 2017, 2291, 2418
Hpy8I GTNNAC 5 cut(s) 17, 622, 2017, 2291, 2418
HpyAV CCTTC 6 cut(s) 72, 86, 700, 1265, 1836, 2064
HpyCH4III ACNGT 7 cut(s) 410, 455, 898, 1364, 1576, 1899, 2021
HpyCH4IV ACGT 3 cut(s) 664, 766, 1303
HpyF10VI GCNNNNNNNGC 2 cut(s) 333, 2044
HpySE526I ACGT 3 cut(s) 664, 766, 1303
Hsp92I GRCGYC 1 cut(s) 113
HspAI GCGC 2 cut(s) 2119, 2433
Kpn2I TCCGGA 1 cut(s) 1210
Ksp22I TGATCA 1 cut(s) 1660
KspAI GTTAAC 1 cut(s) 622
Kzo9I GATC 7 cut(s) 1513, 1594, 1660, 1885, 2157, 2243, 2496
LguI GCTCTTC 1 cut(s) 1728
LmnI GCTCC 5 cut(s) 54, 1186, 1274, 1376, 1978
Lsp1109I GCAGC 4 cut(s) 972, 1108, 1912, 2056
LweI GCATC 7 cut(s) 80, 238, 437, 1459, 1955, 2122, 2257
MabI ACCWGGT 1 cut(s) 1542
MaeI CTAG 5 cut(s) 75, 1125, 1883, 2169, 2318
MaeII ACGT 3 cut(s) 664, 766, 1303
MalI GATC 7 cut(s) 1515, 1596, 1662, 1887, 2159, 2245, 2498
MboI GATC 7 cut(s) 1513, 1594, 1660, 1885, 2157, 2243, 2496
MhlI GDGCHC 6 cut(s) 59, 156, 345, 753, 1279, 2482
MlsI TGGCCA 2 cut(s) 1359, 2098
MluNI TGGCCA 2 cut(s) 1359, 2098
MlyI GAGTC 5 cut(s) 47, 172, 917, 1493, 2087
MmeI TCCRAC 3 cut(s) 223, 1512, 2187
Mox20I TGGCCA 2 cut(s) 1359, 2098
Mph1103I ATGCAT 1 cut(s) 2115
MroI TCCGGA 1 cut(s) 1210
MroXI GAANNNNTTC 1 cut(s) 1206
MscI TGGCCA 2 cut(s) 1359, 2098
MseI TTAA 5 cut(s) 621, 701, 1043, 1353, 2145
MslI CAYNNNNRTG 2 cut(s) 1416, 2222
Msp20I TGGCCA 2 cut(s) 1359, 2098
MspA1I CMGCKG 3 cut(s) 963, 1121, 1600
MspCI CTTAAG 1 cut(s) 1042
MspI CCGG 6 cut(s) 109, 637, 652, 1211, 2286, 2500
MspR9I CCNGG 7 cut(s) 109, 110, 1544, 1628, 1748, 2075, 2501
Mva1269I GAATGC 1 cut(s) 786
MvaI CCWGG 4 cut(s) 1544, 1628, 1748, 2075
MwoI GCNNNNNNNGC 2 cut(s) 333, 2044
NciI CCSGG 3 cut(s) 109, 110, 2501
NdeI CATATG 2 cut(s) 444, 1903
NdeII GATC 7 cut(s) 1513, 1594, 1660, 1885, 2157, 2243, 2496
NlaIV GGNNCC 5 cut(s) 284, 1209, 1378, 1625, 2072
NmuCI GTSAC 5 cut(s) 236, 852, 1326, 2079, 2408
NsiI ATGCAT 1 cut(s) 2115
NspI RCATGY 5 cut(s) 1196, 2113, 2304, 2416, 2424
PaeR7I CTCGAG 1 cut(s) 2231
PagI TCATGA 2 cut(s) 1411, 1708
PceI AGGCCT 1 cut(s) 2213
PciI ACATGT 3 cut(s) 1192, 2412, 2420
PciSI GCTCTTC 1 cut(s) 1728
PctI GAATGC 1 cut(s) 786
PdmI GAANNNNTTC 1 cut(s) 1206
PfeI GAWTC 7 cut(s) 974, 1163, 1604, 1751, 1757, 2275, 2387
PflMI CCANNNNNTGG 1 cut(s) 1633
PkrI GCNGC 4 cut(s) 962, 1123, 1927, 2046
PleI GAGTC 5 cut(s) 46, 171, 917, 1492, 2086
PpsI GAGTC 5 cut(s) 46, 171, 917, 1492, 2086
Ppu21I YACGTR 2 cut(s) 665, 1304
PscI ACATGT 3 cut(s) 1192, 2412, 2420
PshAI GACNNNNGTC 1 cut(s) 850
PsiI TTATAA 2 cut(s) 506, 2518
Psp124BI GAGCTC 2 cut(s) 59, 1279
Psp6I CCWGG 4 cut(s) 1542, 1626, 1746, 2073
PspGI CCWGG 4 cut(s) 1542, 1626, 1746, 2073
PspN4I GGNNCC 5 cut(s) 284, 1209, 1378, 1625, 2072
PspPI GGNCC 2 cut(s) 282, 1623
PspXI VCTCGAGB 1 cut(s) 2231
PvuII CAGCTG 3 cut(s) 963, 1121, 1600
RsaI GTAC 3 cut(s) 519, 1306, 2419
RsaNI GTAC 3 cut(s) 518, 1305, 2418
RseI CAYNNNNRTG 2 cut(s) 1416, 2222
SacI GAGCTC 2 cut(s) 59, 1279
SapI GCTCTTC 1 cut(s) 1728
SaqAI TTAA 5 cut(s) 621, 701, 1043, 1353, 2145
SatI GCNGC 4 cut(s) 961, 1122, 1926, 2045
Sau3AI GATC 7 cut(s) 1513, 1594, 1660, 1885, 2157, 2243, 2496
Sau96I GGNCC 2 cut(s) 282, 1623
SchI GAGTC 5 cut(s) 47, 172, 917, 1493, 2087
ScrFI CCNGG 7 cut(s) 109, 110, 1544, 1628, 1748, 2075, 2501
SduI GDGCHC 6 cut(s) 59, 156, 345, 753, 1279, 2482
SexAI ACCWGGT 1 cut(s) 1542
SfaNI GCATC 7 cut(s) 80, 238, 437, 1459, 1955, 2122, 2257
Sfr274I CTCGAG 1 cut(s) 2231
SinI GGWCC 2 cut(s) 282, 1623
SlaI CTCGAG 1 cut(s) 2231
SmaI CCCGGG 1 cut(s) 110
SmiMI CAYNNNNRTG 2 cut(s) 1416, 2222
SmlI CTYRAG 6 cut(s) 35, 143, 173, 982, 1042, 2231
SmoI CTYRAG 6 cut(s) 35, 143, 173, 982, 1042, 2231
SnaBI TACGTA 2 cut(s) 665, 1304
SseBI AGGCCT 1 cut(s) 2213
SsiI CCGC 9 cut(s) 257, 675, 778, 784, 1452, 1768, 2042, 2457, 2484
SspMI CTAG 5 cut(s) 75, 1125, 1883, 2169, 2318
SstI GAGCTC 2 cut(s) 59, 1279
StuI AGGCCT 1 cut(s) 2213
StyD4I CCNGG 7 cut(s) 107, 108, 1542, 1626, 1746, 2073, 2499
StyI CCWWGG 2 cut(s) 286, 1093
TaaI ACNGT 7 cut(s) 410, 455, 898, 1364, 1576, 1899, 2021
TaiI ACGT 3 cut(s) 667, 769, 1306
TaqI TCGA 4 cut(s) 802, 2160, 2232, 2448
TaqII GACCGA 1 cut(s) 434
TatI WGTACW 1 cut(s) 2417
TfiI GAWTC 7 cut(s) 974, 1163, 1604, 1751, 1757, 2275, 2387
Tru1I TTAA 5 cut(s) 621, 701, 1043, 1353, 2145
Tru9I TTAA 5 cut(s) 621, 701, 1043, 1353, 2145
TscAI CASTG 5 cut(s) 343, 861, 1318, 1387, 1870
TseFI GTSAC 5 cut(s) 236, 852, 1326, 2079, 2408
TseI GCWGC 4 cut(s) 960, 1121, 1925, 2044
Tsp45I GTSAC 5 cut(s) 236, 852, 1326, 2079, 2408
TspGWI ACGGA 1 cut(s) 1862
TspMI CCCGGG 1 cut(s) 108
TspRI CASTG 5 cut(s) 343, 861, 1318, 1387, 1870
Van91I CCANNNNNTGG 1 cut(s) 1633
Vha464I CTTAAG 1 cut(s) 1042
VpaK11BI GGWCC 2 cut(s) 282, 1623
XapI RAATTY 2 cut(s) 387, 2355
XbaI TCTAGA 1 cut(s) 74
XceI RCATGY 5 cut(s) 1196, 2113, 2304, 2416, 2424
XcmI CCANNNNNNNNNTGG 1 cut(s) 293
XhoI CTCGAG 1 cut(s) 2231
XmaI CCCGGG 1 cut(s) 108
XmiI GTMKAC 1 cut(s) 16
XmnI GAANNNNTTC 1 cut(s) 1206
XspI CTAG 5 cut(s) 75, 1125, 1883, 2169, 2318
Zsp2I ATGCAT 1 cut(s) 2115
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.